ProtNLM2 External predictions
View prediction review YAML · AFAP1L2-protnlm-predictions-review.yaml · Review status: COMPLETE
The nine predictions are supported as conserved adaptor-mediated signaling functions or downstream processes, with cytokine and proliferation effects interpreted in their experimental cellular contexts.
Source documents: projects/PROTNLM_EVALUATION/mammal-benchmark/horse40-predictions.csv · projects/PROTNLM_EVALUATION/mammal-benchmark/predictions.jsonl.gz · projects/PROTNLM_EVALUATION/mammal-benchmark/paired-sequences/AFAP1L2.json
Review score: 2 = concordant with evidence; 1 = uncertain; 0 = discordant with evidence. This is an assessment score, not a model probability.
- file:human/AFAP1L2/AFAP1L2-Xu2007-excerpt.md: "In addition to IL-8, the protein level of IL-6 was also reduced by siRNA treatment."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "XB130 expression in HEK293 cells enhanced serum response element- and AP-1-dependent transcriptional activation mediated by c-Src."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "Down-regulation of endogenous XB130 with siRNA reduced c-Src activity, IL-8 production, EGF-induced phosphorylation of Akt and GSK3beta, and altered cell cycles in human lung epithelial cells."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "Their co-expression in COS-7 cells resulted in activation of c-Src and elevated tyrosine phosphorylation of multiple proteins, including XB130 itself."
- PMID:17412687: "Down-regulation of endogenous XB130 with siRNA reduced c-Src activity, IL-8 production, EGF-induced phosphorylation of Akt and GSK3beta, and altered cell cycles in human lung epithelial cells."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "Down-regulation of endogenous XB130 with siRNA reduced c-Src activity, IL-8 production, EGF-induced phosphorylation of Akt and GSK3beta, and altered cell cycles in human lung epithelial cells."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "XB130DeltaN, an N-terminal deletion mutant lacking a putative SH3-binding motif and several putative SH2-binding sites, reduced its ability to mediate Src signal transduction."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "XB130DeltaN, an N-terminal deletion mutant lacking a putative SH3-binding motif and several putative SH2-binding sites, reduced its ability to mediate Src signal transduction."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "Down-regulation of endogenous XB130 with siRNA reduced c-Src activity, IL-8 production, EGF-induced phosphorylation of Akt and GSK3beta, and altered cell cycles in human lung epithelial cells."
- file:human/AFAP1L2/AFAP1L2-Xu2007-excerpt.md: "In addition to IL-8, the protein level of IL-6 was also reduced by siRNA treatment."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."
- PMID:17412687: "Down-regulation of endogenous XB130 with siRNA reduced c-Src activity, IL-8 production, EGF-induced phosphorylation of Akt and GSK3beta, and altered cell cycles in human lung epithelial cells."
- file:HORSE/AFAP1L2/AFAP1L2-uniprot.txt: "DR InterPro; IPR030113; AFAP."
- file:HORSE/AFAP1L2/AFAP1L2-bioinformatics/RESULTS.md: "share 88.6% identity among 818 paired residues."