WEE1 is a nuclear non-receptor protein tyrosine kinase of the WEE1 branch of the eukaryotic protein kinase superfamily. It phosphorylates the inhibitory tyrosine (Tyr15) of CDK1 in complex with cyclin B, keeping the kinase inactive during S and G2 phases so that cells do not enter mitosis before DNA replication is complete and DNA damage is repaired. The 646-residue protein has a long N-terminal regulatory region, a central kinase domain and a short C-terminal region; its abundance and activity are controlled by phosphorylation and ubiquitin-mediated degradation at mitotic entry. It is distinct from the oocyte-enriched paralog WEE2, which regulates CDK1 during meiosis, and from the membrane-associated PKMYT1, which phosphorylates both Thr14 and Tyr15.
Summary: Nucleotide (ATP) binding by the intact WEE1 kinase domain.
Reason: F6TY09 is a full-length (646 aa) WEE1 in PANTHER subfamily PTHR11042:SF72 together with human, mouse and rat WEE1, and retains the PIRSF037281 Wee1-like kinase signature, the predicted catalytic proton acceptor (D426) and the PIRSR ATP and Mg2+ binding positions. ATP/Mg2+-dependent phosphotransfer by the orthologous human enzyme is directly demonstrated, so this cofactor/substrate-binding term is well grounded, though peripheral to the informative catalytic term.
Summary: Correct but uninformative; WEE1 acts specifically to restrain the G2/M transition.
Reason: The InterPro2GO mapping of the Wee1-like kinase signature to mitotic cell cycle is true of WEE1 but much less specific than the established role. The orthologous human WEE1 (same PANTHER subfamily SF72) inhibits CDK1 by Tyr15 phosphorylation and delays mitotic entry, and the gene already carries the PAINT-propagated term negative regulation of G2/M transition of mitotic cell cycle (PTN008510965). Refine to that term.
Summary: Mg2+ is a catalytic cofactor of the conserved WEE1 kinase domain.
Reason: F6TY09 is a full-length (646 aa) WEE1 in PANTHER subfamily PTHR11042:SF72 together with human, mouse and rat WEE1, and retains the PIRSF037281 Wee1-like kinase signature, the predicted catalytic proton acceptor (D426) and the PIRSR ATP and Mg2+ binding positions. ATP/Mg2+-dependent phosphotransfer by the orthologous human enzyme is directly demonstrated, so this cofactor/substrate-binding term is well grounded, though peripheral to the informative catalytic term.
Summary: Generic catalytic term; the established WEE1 activity is protein tyrosine kinase.
Reason: Correct but too general. Human WEE1, in the same PANTHER subfamily (SF72) as this full-length horse protein (95.4% identity over its whole length), phosphorylates CDK1 Tyr15 directly, and PAINT propagated protein tyrosine kinase activity to the WEE1 clade (PTN008510964). Refine to protein tyrosine kinase activity, which the gene already carries.
purified human Wee1 phosphorylates p34cdc2 exclusively on Tyr15 in vitro; no Thr14 phosphorylation was detected.
file:HORSE/WEE1/WEE1-uniprot.txt
PTHR11042:SF72; WEE1-LIKE PROTEIN KINASE; 1.
file:HORSE/WEE1/WEE1-bioinformatics/RESULTS.md
share 95.4% identity among 646 paired residues.
GO:0004674 protein serine/threonine kinase activity
IEA GO_REF:0000120
MODIFY
Summary: Ser/Thr residue specificity is not supported for WEE1; the established activity is tyrosine-directed.
Reason: These rows derive from the PROSITE Ser/Thr kinase active-site motif (PS00108/PRU10027), EC 2.7.11.1 and its Rhea mapping, and the generic UniRule kinase rule; that motif marks the eukaryotic kinase fold rather than residue specificity. Purified human WEE1 (same PANTHER subfamily SF72) phosphorylates CDK1 exclusively on Tyr15 with no Thr14 phosphorylation; dual Thr14/Tyr15 activity belongs to the PKMYT1 branch and to fungal Wee1 in other subfamilies. PAINT curators placed protein serine/threonine kinase activity on a different PTHR11042 node (PTN008683913) that does not reach WEE1, and propagated only tyrosine kinase activity to the WEE1 clade, which we read as a deliberate decision. Replace with protein tyrosine kinase activity (lateral correction). Being phosphorylated on Ser/Thr residues (WEE1 is itself a substrate of CDK1, PLK1 and CK2) does not make WEE1 a Ser/Thr kinase.
Reason: The PAINT IBD for protein tyrosine kinase activity sits at PTN008510964 and is seeded by human WEE1, Drosophila Wee1 and Xenopus WEE2 experimental data; F6TY09 is a full-length SF72 WEE1 inside that clade with an intact catalytic domain. Purified human WEE1 phosphorylates CDK1 Tyr15. WEE1 is a soluble, nuclear, non-membrane-spanning kinase, so the non-membrane-spanning child term is also appropriate.
Reason: The PAINT IBD for protein tyrosine kinase activity sits at PTN008510964 and is seeded by human WEE1, Drosophila Wee1 and Xenopus WEE2 experimental data; F6TY09 is a full-length SF72 WEE1 inside that clade with an intact catalytic domain. Purified human WEE1 phosphorylates CDK1 Tyr15. WEE1 is a soluble, nuclear, non-membrane-spanning kinase, so the non-membrane-spanning child term is also appropriate.
Reason: The PAINT IBD for protein tyrosine kinase activity sits at PTN008510964 and is seeded by human WEE1, Drosophila Wee1 and Xenopus WEE2 experimental data; F6TY09 is a full-length SF72 WEE1 inside that clade with an intact catalytic domain. Purified human WEE1 phosphorylates CDK1 Tyr15. WEE1 is a soluble, nuclear, non-membrane-spanning kinase, so the non-membrane-spanning child term is also appropriate.
Summary: ATP is the phosphate donor for WEE1 catalysis; the ATP-binding site is conserved.
Reason: F6TY09 is a full-length (646 aa) WEE1 in PANTHER subfamily PTHR11042:SF72 together with human, mouse and rat WEE1, and retains the PIRSF037281 Wee1-like kinase signature, the predicted catalytic proton acceptor (D426) and the PIRSR ATP and Mg2+ binding positions. ATP/Mg2+-dependent phosphotransfer by the orthologous human enzyme is directly demonstrated, so this cofactor/substrate-binding term is well grounded, though peripheral to the informative catalytic term.
Summary: WEE1 acts in the nucleus to protect it from prematurely activated CDK1.
Reason: The nuclear location is an IBD placed at the deep PTHR11042 node PTN000113601 and is directly shown for human WEE1 (same subfamily SF72), whose nuclear localisation underlies its checkpoint function.
Summary: WEE1 acts in the nucleus to protect it from prematurely activated CDK1.
Reason: The nuclear location is an IBD placed at the deep PTHR11042 node PTN000113601 and is directly shown for human WEE1 (same subfamily SF72), whose nuclear localisation underlies its checkpoint function.
Summary: Nucleolar pool is transferred from a human HPA image annotation that is itself unresolved.
Reason: This Ensembl Compara projection copies the human HPA nucleolus IDA (GO_REF:0000052), which the human WEE1 review leaves UNDECIDED pending image-level assessment. Nuclear localisation is established, but no primary study establishes a specific nucleolar pool for WEE1 in any species.
Summary: A cytoplasmic WEE1 pool is plausible but is not where the checkpoint activity is best defined.
Reason: Cytoplasm is an IBD at the deep PTHR11042 node PTN000113601 (seeded mostly by eIF2-alpha kinases, PKMYT1 and WEE2) and is projected by Ensembl Compara from mouse Wee1. WEE1 is predominantly nuclear, but a cytoplasmic pool before nuclear import or after nuclear envelope breakdown is compatible with its biology. Retain as non-core.
Summary: A cytoplasmic WEE1 pool is plausible but is not where the checkpoint activity is best defined.
Reason: Cytoplasm is an IBD at the deep PTHR11042 node PTN000113601 (seeded mostly by eIF2-alpha kinases, PKMYT1 and WEE2) and is projected by Ensembl Compara from mouse Wee1. WEE1 is predominantly nuclear, but a cytoplasmic pool before nuclear import or after nuclear envelope breakdown is compatible with its biology. Retain as non-core.
the human wee1-like tyrosine kinase is a nuclear protein that ensures the completion of DNA replication prior to mitosis
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle
IBA GO_REF:0000033
ACCEPT
Summary: Core process: WEE1 restrains mitotic entry by inhibiting CDK1.
Reason: PAINT placed this term at PTN008510965 (seeded by human WEE1) and F6TY09 descends from it as a full-length SF72 ortholog. WEE1 itself does the work of the regulation: it catalyses the inhibitory Tyr15 phosphorylation of cyclin B-CDK1 that delays the G2/M transition.
the human wee1-like tyrosine kinase is a nuclear protein that ensures the completion of DNA replication prior to mitosis
file:HORSE/WEE1/WEE1-uniprot.txt
PTHR11042:SF72; WEE1-LIKE PROTEIN KINASE; 1.
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle
IEA GO_REF:0000107
ACCEPT
Summary: Core process: WEE1 restrains mitotic entry by inhibiting CDK1.
Reason: PAINT placed this term at PTN008510965 (seeded by human WEE1) and F6TY09 descends from it as a full-length SF72 ortholog. WEE1 itself does the work of the regulation: it catalyses the inhibitory Tyr15 phosphorylation of cyclin B-CDK1 that delays the G2/M transition.
Summary: Generic catalytic term; the established WEE1 activity is protein tyrosine kinase.
Reason: Correct but too general. Human WEE1, in the same PANTHER subfamily (SF72) as this full-length horse protein (95.4% identity over its whole length), phosphorylates CDK1 Tyr15 directly, and PAINT propagated protein tyrosine kinase activity to the WEE1 clade (PTN008510964). Refine to protein tyrosine kinase activity, which the gene already carries.
Summary: Generic catalytic term; the established WEE1 activity is protein tyrosine kinase.
Reason: Correct but too general. Human WEE1, in the same PANTHER subfamily (SF72) as this full-length horse protein (95.4% identity over its whole length), phosphorylates CDK1 Tyr15 directly, and PAINT propagated protein tyrosine kinase activity to the WEE1 clade (PTN008510964). Refine to protein tyrosine kinase activity, which the gene already carries.
Summary: Ser/Thr residue specificity is not supported for WEE1; the established activity is tyrosine-directed.
Reason: These rows derive from the PROSITE Ser/Thr kinase active-site motif (PS00108/PRU10027), EC 2.7.11.1 and its Rhea mapping, and the generic UniRule kinase rule; that motif marks the eukaryotic kinase fold rather than residue specificity. Purified human WEE1 (same PANTHER subfamily SF72) phosphorylates CDK1 exclusively on Tyr15 with no Thr14 phosphorylation; dual Thr14/Tyr15 activity belongs to the PKMYT1 branch and to fungal Wee1 in other subfamilies. PAINT curators placed protein serine/threonine kinase activity on a different PTHR11042 node (PTN008683913) that does not reach WEE1, and propagated only tyrosine kinase activity to the WEE1 clade, which we read as a deliberate decision. Replace with protein tyrosine kinase activity (lateral correction). Being phosphorylated on Ser/Thr residues (WEE1 is itself a substrate of CDK1, PLK1 and CK2) does not make WEE1 a Ser/Thr kinase.
purified human Wee1 phosphorylates p34cdc2 exclusively on Tyr15 in vitro; no Thr14 phosphorylation was detected.
file:HORSE/WEE1/WEE1-uniprot.txt
PTHR11042:SF72; WEE1-LIKE PROTEIN KINASE; 1.
Core Functions
Non-receptor protein tyrosine kinase that phosphorylates the inhibitory Tyr15 of cyclin B-CDK1 in the nucleus, restraining entry into mitosis until DNA replication is complete.
These computational predictions are reviewed separately from the GOA annotation set used for this review. The assessments below are from this project and do not constitute official GO annotations or endorsement by GO/UniProt. They are not included in the existing annotation review above.
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: WEE1 is a conserved CDK-inhibitory kinase, but mammalian oocyte studies distinguish somatic WEE1 from WEE2/Wee1B. A mitotic checkpoint mechanism does not automatically establish regulation of meiosis I. Wee1B/WEE2 is the oocyte-specific MPF-inhibitory kinase that maintains prophase I arrest, but immunodetected wee1 is present in mouse oocyte nuclei during acquisition of meiotic competence (antibody specificity versus Wee1B not established), and Wee2 knockout mice retain fertility, so a somatic WEE1 contribution to meiosis I is neither shown nor excluded. No perturbation of somatic WEE1 in mammalian meiosis I was found in a PubMed search.
Supporting Evidence:
PMID:16169490: "Unlike the widely expressed Wee1 and Myt1, mWee1B mRNA and its protein"
PMID:8886990: "an increase in the nuclear concentration of wee1 occurs"
PMID:7743995: "WEE1Hu plays a role in inhibiting mitosis before M phase by phosphorylating cyclin B1-Cdc2."
PMID:21454751: "Wee1B mRNA was continuously expressed during the meiotic cell cycle and was replaced by somatic Wee1 (hereafter termed Wee1A) during the 2- or 4-cell embryo mitotic divisions"
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: Human experiments place the soluble checkpoint kinase in the nucleus. Full-length horse sequence conservation (same PANTHER subfamily SF72 as human WEE1, which carries nucleoplasm from Reactome CDK1-phosphorylation reactions) supports nucleoplasmic activity. The horse gene carries only nucleus and nucleolus, so nucleoplasm is a novel, more specific location.
Supporting Evidence:
PMID:8348613: "the human wee1-like tyrosine kinase is a nuclear protein that ensures the completion of DNA replication prior to mitosis"
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: The characterized WEE1 checkpoint pool is nuclear, with additional cytoplasmic annotations. A PubMed search found membrane association for the paralog PKMYT1/Myt1 and cortical-node localization of fission-yeast Wee1, but no evidence establishing plasma-membrane recruitment of vertebrate WEE1. A soluble kinase can associate peripherally with a membrane, so absence of a transmembrane helix does not refute the prediction.
Supporting Evidence:
PMID:8348613: "the human wee1-like tyrosine kinase is a nuclear protein that ensures the completion of DNA replication prior to mitosis"
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
PARALOG OVERANNOTATION
Review rationale: The prediction assigns a WEE2/Wee1B oocyte process to the somatic WEE1 paralog. The selected horse F6TY09 sequence is a full-length WEE1 clade member, not the horse WEE2 protein, and the focused WEE1/WEE2 comparison places F6TY09 at ~90-95% identity to human and mouse WEE1 but only ~50% identity to WEE2 orthologs. The mouse experiment that supports female pronucleus assembly specifically showed Wee1B depletion blocking pronucleus formation while Wee1A-depleted oocytes activated correctly. Horse has a separate WEE2 entry, A0A9L0SIB9, and the WEE2 clade, not F6TY09, carries GO:0035038 across mammalian annotations. Later Wee2 knockout and possible-compensation evidence cautions against claiming that WEE2 is absolutely indispensable, but does not support transferring this WEE2-clade process back to somatic WEE1.
Supporting Evidence:
PMID:21454751: "Wee1B knockdown oocytes failed to form pronuclei, whereas oocytes injected with control, Myt1, or Wee1A MO were correctly activated"
PMID:21454751: "Wee1B mRNA was continuously expressed during the meiotic cell cycle and was replaced by somatic Wee1 (hereafter termed Wee1A) during the 2- or 4-cell embryo mitotic divisions"
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: Protein phosphorylation follows directly from the conserved WEE1 tyrosine-kinase reaction. Mouse Wee1 has direct-assay evidence for protein phosphorylation, and the horse gene carries no phosphorylation process term, so the prediction is novel for this gene. It is correct but broad relative to the specific peptidyl-tyrosine phosphorylation of CDK1 Tyr15.
Supporting Evidence:
PMID:8428596: "purified human Wee1 phosphorylates p34cdc2 exclusively on Tyr15 in vitro; no Thr14 phosphorylation was detected."
GO:0042327 positive regulation of phosphorylationGO_BP
UNC β Uncertain Review score: 1/2
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: WEE1 catalyzes inhibitory CDK phosphorylation, which supports protein phosphorylation. A separate positive-regulation-of-phosphorylation process requires identifying the regulated reaction; the direct catalytic reaction alone does not establish that regulatory relationship, and effects on downstream CDK phosphorylation are inhibitory.
Supporting Evidence:
PMID:8428596: "purified human Wee1 phosphorylates p34cdc2 exclusively on Tyr15 in vitro; no Thr14 phosphorylation was detected."
PMID:7743995: "WEE1Hu plays a role in inhibiting mitosis before M phase by phosphorylating cyclin B1-Cdc2."
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: Mammalian studies identify WEE2/Wee1B as the oocyte-enriched paralog, whereas this horse sequence is WEE1. The broad female-meiosis term is not validated by conserved kinase activity alone. Redundancy and species-specific expression leave possible participation unresolved rather than proving absence. Immunodetected wee1 is present in mouse oocytes, and Wee2 knockout mice retain fertility, so neither indispensability of WEE2 nor absence of a WEE1 contribution is established.
Supporting Evidence:
PMID:8886990: "an increase in the nuclear concentration of wee1 occurs"
PMID:21454751: "Wee1B mRNA was continuously expressed during the meiotic cell cycle and was replaced by somatic Wee1 (hereafter termed Wee1A) during the 2- or 4-cell embryo mitotic divisions"
PMID:21454751: "Wee1B knockdown oocytes failed to form pronuclei, whereas oocytes injected with control, Myt1, or Wee1A MO were correctly activated"