id: F6TY09
gene_symbol: WEE1
taxon:
  id: NCBITaxon:9796
  label: Equus caballus
status: COMPLETE
description: The intact WEE1 sequence supports nuclear CDK phosphorylation; oocyte-specific predictions
  require distinction from WEE2.
source_documents:
- projects/PROTNLM_EVALUATION/mammal-benchmark/horse40-predictions.csv
- projects/PROTNLM_EVALUATION/mammal-benchmark/predictions.jsonl.gz
- projects/PROTNLM_EVALUATION/mammal-benchmark/paired-sequences/WEE1.json
references:
- id: PMID:7743995
  title: Regulation of the human WEE1Hu CDK tyrosine 15-kinase during the cell cycle.
  full_text_unavailable: true
  findings: []
- id: PMID:21454751
  title: Protein tyrosine kinase Wee1B is essential for metaphase II exit in mouse oocytes.
  full_text_unavailable: false
  findings: []
- id: file:HORSE/WEE1/WEE1-bioinformatics/RESULTS.md
  title: HORSE/WEE1/WEE1-bioinformatics/RESULTS.md
  findings: []
- id: PMID:8348613
  title: Human wee1 maintains mitotic timing by protecting the nucleus from cytoplasmically activated
    Cdc2 kinase.
  full_text_unavailable: true
  findings: []
- id: PMID:8428596
  title: Human Wee1 kinase inhibits cell division by phosphorylating p34cdc2 exclusively on Tyr15.
  full_text_unavailable: true
  findings: []
- id: PMID:37527245
  title: Oocyte-specific Wee1-like protein kinase 2 is dispensable for fertility in mice.
  full_text_unavailable: false
  findings: []
predictions:
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0060631
    label: regulation of meiosis I
  predicted_term_type: GO_BP
  review:
    assessment: UNC
    confidence_score: 1
    summary: WEE1 is a conserved CDK-inhibitory kinase, but mammalian oocyte studies distinguish somatic
      WEE1 from WEE2/Wee1B. A mitotic checkpoint mechanism does not automatically establish regulation
      of meiosis I. Broad meiotic participation cannot be excluded without horse-specific expression and
      perturbation evidence. Later Wee2 knockout mice retain fertility, reinforcing that this evidence
      should not be generalized to absolute indispensability or absence of compensation.
    supported_by:
    - &id006
      reference_id: PMID:7743995
      supporting_text: 'WEE1Hu plays a role in

        inhibiting mitosis before M phase by phosphorylating cyclin B1-Cdc2.'
    - &id003
      reference_id: PMID:21454751
      supporting_text: Wee1B mRNA was continuously expressed during the meiotic cell cycle and was replaced
        by somatic Wee1 (hereafter termed Wee1A) during the 2- or 4-cell embryo mitotic divisions
    - &id001
      reference_id: file:HORSE/WEE1/WEE1-bioinformatics/RESULTS.md
      supporting_text: share 95.4% identity among 646 paired residues.
    - &id004
      reference_id: PMID:37527245
      supporting_text: 'Wee2 loss-of-function is likely complicated by biological

        redundancies with other proteins co-expressed in oocytes.'
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0005654
    label: nucleoplasm
  predicted_term_type: GO_CC
  review:
    assessment: COR
    confidence_score: 2
    summary: Human experiments place the soluble checkpoint kinase in the nucleus. Full-length horse sequence
      conservation supports nucleoplasmic activity; this is more specific than the frozen horse nucleus
      annotation.
    supported_by:
    - &id002
      reference_id: PMID:8348613
      supporting_text: 'the human wee1-like tyrosine kinase is a nuclear protein that ensures

        the completion of DNA replication prior to mitosis'
    - *id001
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0005886
    label: plasma membrane
  predicted_term_type: GO_CC
  review:
    assessment: UNC
    confidence_score: 1
    summary: The characterized WEE1 checkpoint pool is nuclear, with additional cytoplasmic annotations.
      No primary evidence retrieved establishes plasma-membrane recruitment of the selected horse protein.
      A soluble kinase can associate peripherally with a membrane, so absence of a transmembrane helix
      does not refute the prediction.
    supported_by:
    - *id002
    - *id001
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0035038
    label: female pronucleus assembly
  predicted_term_type: GO_BP
  review:
    assessment: UNC
    confidence_score: 1
    summary: The mouse egg-activation experiment distinguishes WEE2/Wee1B depletion, which blocks pronucleus
      formation, from WEE1/Wee1A depletion, which does not in that assay. The selected horse sequence
      is a close full-length WEE1 match, making paralog transfer a plausible explanation. However, differential
      necessity does not exclude participation, and later Wee2 knockout mice retain substantial fertility
      with possible compensation. Without horse oocyte expression and perturbation evidence, this specific
      biological-process prediction remains uncertain rather than definitively refuted.
    supported_by:
    - &id007
      reference_id: PMID:21454751
      supporting_text: Wee1B knockdown oocytes failed to form pronuclei, whereas oocytes injected with
        control, Myt1, or Wee1A MO were correctly activated
    - *id003
    - *id001
    - *id004
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0006468
    label: protein phosphorylation
  predicted_term_type: GO_BP
  review:
    assessment: COR
    confidence_score: 2
    summary: Protein phosphorylation follows directly from the conserved WEE1 tyrosine-kinase reaction.
      This is correct but broad relative to its specific CDK-inhibitory mechanism.
    supported_by:
    - &id005
      reference_id: PMID:8428596
      supporting_text: 'purified human Wee1 phosphorylates p34cdc2 exclusively on Tyr15 in vitro; no

        Thr14 phosphorylation was detected.'
    - *id001
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0042327
    label: positive regulation of phosphorylation
  predicted_term_type: GO_BP
  review:
    assessment: UNC
    confidence_score: 1
    summary: WEE1 catalyzes inhibitory CDK phosphorylation, which supports protein phosphorylation. A
      separate positive-regulation-of-phosphorylation process requires identifying the regulated reaction;
      the direct catalytic reaction alone does not establish that regulatory relationship, and effects
      on downstream CDK phosphorylation are inhibitory.
    supported_by:
    - *id005
    - *id006
    - *id001
- source_method: ProtNLM2
  source_version: UniProt API snapshot 2026-09-08
  predicted_term:
    id: GO:0007143
    label: female meiotic nuclear division
  predicted_term_type: GO_BP
  review:
    assessment: UNC
    confidence_score: 1
    summary: Mammalian studies identify WEE2/Wee1B as the oocyte-enriched paralog, whereas this horse
      sequence is WEE1. The broad female-meiosis term is not validated by conserved kinase activity alone.
      Redundancy and species-specific expression leave possible participation unresolved rather than proving
      absence. Later Wee2 knockout mice retain fertility, reinforcing that this evidence should not be
      generalized to absolute indispensability or absence of compensation.
    supported_by:
    - *id003
    - *id007
    - *id001
    - *id004
