ProtNLM2 External predictions
View prediction review YAML Β· B7FXQ8-protnlm-predictions-review.yaml Β· Review status: COMPLETE
The small heat-shock protein HSP20A of Phaeodactylum tricornutum has architecture supporting oligomerization, unfolded-protein binding, and a protective chaperone role. Specific heat, salt, and peroxide responses remain unresolved.
Source documents: genes/PHATC/B7FXQ8/B7FXQ8-uniprot.txt Β· genes/PHATC/B7FXQ8/B7FXQ8-goa.tsv Β· publications/PMID_29983375.md Β· genes/PHATC/B7FXQ8/B7FXQ8-hypotheses/prediction-salt-and-peroxide-stress/openscientist.md
Review score: 2 = concordant with evidence; 1 = uncertain; 0 = discordant with evidence. This is an assessment score, not a model probability.
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- PMID:29983375: "Small heat-shock proteins (sHSPs) are molecular chaperones that bind partially and globally unfolded states of their client proteins. ... the archaeal Hsp16.5, which forms ordered and symmetric 24-subunit oligomers"
- file:PHATC/B7FXQ8/B7FXQ8-hypotheses/prediction-salt-and-peroxide-stress/openscientist.md: "the salt and peroxide predictions are outliers even relative to the family's own conservative InterPro2GO mapping"
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- PMID:29983375: "Small heat-shock proteins (sHSPs) are molecular chaperones that bind partially and globally unfolded states of their client proteins. ... the archaeal Hsp16.5, which forms ordered and symmetric 24-subunit oligomers"
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- PMID:29983375: "Small heat-shock proteins (sHSPs) are molecular chaperones that bind partially and globally unfolded states of their client proteins. ... the archaeal Hsp16.5, which forms ordered and symmetric 24-subunit oligomers"
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- PMID:29983375: "Small heat-shock proteins (sHSPs) are molecular chaperones that bind partially and globally unfolded states of their client proteins. ... the archaeal Hsp16.5, which forms ordered and symmetric 24-subunit oligomers"
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- file:PHATC/B7FXQ8/B7FXQ8-hypotheses/prediction-salt-and-peroxide-stress/openscientist.md: "the salt and peroxide predictions are outliers even relative to the family's own conservative InterPro2GO mapping"
- file:PHATC/B7FXQ8/B7FXQ8-uniprot.txt: "ID B7FXQ8_PHATC Unreviewed; 163 AA. ... DR InterPro; IPR002068; A-crystallin/Hsp20_dom. ... DR InterPro; IPR008978; HSP20-like_chaperone. ... DR InterPro; IPR031107; Small_HSP. ... FT DOMAIN 47..155 ... FT /note="SHSP""
- PMID:29983375: "Small heat-shock proteins (sHSPs) are molecular chaperones that bind partially and globally unfolded states of their client proteins. ... the archaeal Hsp16.5, which forms ordered and symmetric 24-subunit oligomers"