PINA

UniProt ID: Q5TK28
Organism: Physcomitrium patens
Review Status: COMPLETE
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Gene Description

PINA is a canonical long-loop PIN auxin exporter in the moss Physcomitrium patens (historically Physcomitrella patens). It localizes at the plasma membrane, with polar enrichment at protonemal tips and context-dependent distribution in leaves. Native mutant combinations with PINB affect auxin distribution, gametophore leaf development and shoot tropisms. Radioactive auxin-export assays with induced PINA-GFP in moss support its exporter activity. PINA contributes more strongly than PINB to some auxin-sensitive gametophore phenotypes, while their reproductive contributions differ. During early leaf-like organ (phyllid) growth, PINA and PINB mainly regulate intracellular auxin levels; basal polarity appears only later in differentiated tip cells, so export does not imply directional transport at every developmental stage.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005783 endoplasmic reticulum
IBA
GO_REF:0000033
UNDECIDED
Summary: Native ER localization remains unresolved in its assay context.
Reason: The ER IBD at PTN001589272 is a land-plant ancestral judgment seeded by Arabidopsis PIN5/6/8. Native moss PM localization does not exclude ER residence. The full 2014 study (PMID:25448003) explicitly discusses an earlier heterologous tobacco-protoplast PINA ER observation and reports non-colocalization of native PIN signal with the ER marker BIP2; the latter antibody experiment is not uniquely PINA-specific. These assay contexts do not settle native PINA ER residence. No target-specific loss or erroneous ancestral placement is established. Keep the root-organelle claim unresolved, without replacement by plasma membrane. Normal retrieval of the historical PMID:19506555 is abstract-only; the target-specific construct interpretation is available in the later full study, not independently re-established from the old abstract.
Propagation Review
Root cause: UNRESOLVED
Sources checked:
PANTHER:PTN001589272 UNRESOLVED
ER source node and Arabidopsis PIN5/6/8 descendants inspected; native target ER residence is not resolved by PM localization.
Supporting Evidence:
PMID:37528584
PpPINA-GFP localized at the PM of the protonema tip with a clear polarity in both initial and elongated protonemata (Figure 4A).
PMID:25448003
Our results suggest that PINA and PINB act redundantly to remove auxin from the apex and initiating leaves, allowing normal development to proceed.
GO:0005886 plasma membrane
IBA
GO_REF:0000033
ACCEPT
Summary: Native moss PIN reaches the plasma membrane.
Reason: PMID:37528584 examines the target GFP fusion under its native promoter in moss. PINA is polar at filament tips, basal/apical in young leaves, and more even near leaf bases. This independently supports the PAINT localization. The 2026 native phyllid time series (PMID:41984944) independently confirms membrane localization while restricting basal polarity to later differentiated tip cells, not early growing phyllids.
Propagation Review
Root cause: NO FAILURE CORE
Sources checked:
PANTHER:PTN001589272 SUPPORTS TRANSFER
Native target GFP localization supports inheritance of PM localization.
Supporting Evidence:
PMID:37528584
PpPINA-GFP localized at the PM of the protonema tip with a clear polarity in both initial and elongated protonemata (Figure 4A).
PMID:41984944
both PINA-GFP and PINB-GFP signals were primarily detected at membranes, without any clear basal polarization
GO:0016020 membrane
IEA
GO_REF:0000120
MODIFY
Summary: Membrane localization can be refined to plasma membrane.
Reason: Native target localization supports the more precise GO:0005886, already represented in this review. This is refinement of generic membrane and does not remove a potentially separate ER pool. The 2026 native phyllid time series (PMID:41984944) independently confirms membrane localization while restricting basal polarity to later differentiated tip cells, not early growing phyllids.
Proposed replacements: plasma membrane
Supporting Evidence:
PMID:37528584
PpPINA-GFP localized at the PM of the protonema tip with a clear polarity in both initial and elongated protonemata (Figure 4A).
PMID:41984944
both PINA-GFP and PINB-GFP signals were primarily detected at membranes, without any clear basal polarization
GO:0022857 transmembrane transporter activity
IBA
GO_REF:0000033
MODIFY
Summary: The transporter activity is specifically auxin efflux.
Reason: The general PAINT transporter function is correct and can be made substrate- and direction-specific. PMID:37528584 directly measures increased H3-IAA release from induced PINA-GFP moss lines. Refine to GO:0010329; native developmental phenotypes alone are not a direct turnover measurement.
Propagation Review
Root cause: NO FAILURE CORE
Sources checked:
PANTHER:PTN002065923 SUPPORTS TRANSFER
The inspected PAINT node supports general transmembrane transport from Arabidopsis PIN descendant evidence; independent moss experiments justify substrate/direction refinement without rejecting ancestral transporter function.
Supporting Evidence:
PMID:37528584
In comparison with the WT, all examined PIN-GFP plants showed a higher amount of radioactive auxin in the culture medium, indicating their auxin export activity (Figure 3B).
PMID:37528584
We determined the localization pattern of the PIN proteins by fusing GFP to AtPIN1, AtPIN2, PpPINA, and MpPINZ as shown in Figure 3A (Zhang et al., 2019).
GO:0055085 transmembrane transport
IEA
GO_REF:0000002
MODIFY
Summary: Transmembrane transport is specifically auxin export.
Reason: The PIN protein performs auxin export, so the generic BP can be refined to GO:0010315. The induced PINA-GFP assay measures release into moss culture medium (PMID:37528584). Cell-to-environment export is not by itself proof of tissue-scale canalization, nor does it establish universal ABCB/AGC-kinase dependence. The 2026 phyllid study supports export-mediated control of intracellular auxin rather than early basipetal tissue transport; it does not negate exporter activity.
Supporting Evidence:
PMID:37528584
In comparison with the WT, all examined PIN-GFP plants showed a higher amount of radioactive auxin in the culture medium, indicating their auxin export activity (Figure 3B).
PMID:37528584
We determined the localization pattern of the PIN proteins by fusing GFP to AtPIN1, AtPIN2, PpPINA, and MpPINZ as shown in Figure 3A (Zhang et al., 2019).

Core Functions

Plasma-membrane auxin export regulating intracellular auxin availability and development in moss. In early growing phyllids, export limits intracellular auxin rather than directing basipetal tissue transport; polarity varies with tissue and developmental stage.

Supporting Evidence:
  • PMID:37528584
    PpPINA-GFP localized at the PM of the protonema tip with a clear polarity in both initial and elongated protonemata (Figure 4A).
  • PMID:37528584
    In comparison with the WT, all examined PIN-GFP plants showed a higher amount of radioactive auxin in the culture medium, indicating their auxin export activity (Figure 3B).
  • PMID:37528584
    We determined the localization pattern of the PIN proteins by fusing GFP to AtPIN1, AtPIN2, PpPINA, and MpPINZ as shown in Figure 3A (Zhang et al., 2019).
  • PMID:41984944
    both PINA-GFP and PINB-GFP signals were primarily detected at membranes, without any clear basal polarization

References

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Suggested Questions for Experts

Q: Does native PINA occupy a functional ER pool in particular tissues or physiological states, independently of transit to the plasma membrane?

πŸ“š Additional Documentation

Notes

(PINA-notes.md)

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