Ornithine decarboxylase antizyme (ODC-Az) is a small (142 aa) regulatory protein and the master negative regulator of cellular polyamine homeostasis. It binds to monomers of ornithine decarboxylase (ODC), the rate-limiting enzyme of polyamine biosynthesis, sterically preventing assembly of the catalytically active ODC homodimer and thereby inhibiting ODC enzymatic activity. In addition to inhibiting ODC, antizyme targets the bound ODC monomer for ubiquitin-independent degradation by the 26S proteasome, providing a second, irreversible layer of down-regulation. Through these activities antizyme lowers intracellular putrescine, spermidine and spermine levels and also suppresses cellular polyamine uptake, coupling polyamine biosynthesis and transport to feedback control. Antizyme synthesis is itself controlled by an autoregulatory, polyamine-stimulated +1 ribosomal frameshifting event required to translate the full-length protein from two overlapping open reading frames, so that high polyamine levels increase antizyme production and thereby reinforce the negative feedback loop. The protein acts predominantly in the cytoplasm but can also localize to the nucleus. This regulatory mechanism is deeply conserved across eukaryotes, from yeast to nematodes to mammals.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005634
nucleus
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: Nuclear localization is inferred by phylogenetic propagation from the antizyme ortholog family (PANTHER PTN001616256), where mammalian antizymes have been observed to shuttle between cytoplasm and nucleus. This is a plausible but peripheral localization for the P. pacificus protein; the defining, growth-regulatory action of antizyme (ODC binding, inhibition and proteasomal targeting) occurs predominantly in the cytoplasm. Retained as a valid but non-core cellular component.
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: Cytoplasm is the principal site where antizyme binds ODC monomers, inhibits ODC activity and delivers ODC to the 26S proteasome, consistent with the well-established antizyme ortholog family. The localization is correct, but "cytoplasm" is a broad cellular-component term that does not itself describe the molecular function; retained as a valid non-core location.
|
|
GO:0008073
ornithine decarboxylase inhibitor activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: This is the core molecular function of antizyme and is strongly supported. The annotation is propagated phylogenetically from an antizyme ortholog family with direct experimental evidence (e.g. human and mouse antizymes, UniProtKB:P54368, O95190, Q9UMX2). The P. pacificus protein belongs to the ODC antizyme family (Pfam PF02100, InterPro IPR002993) and is documented to negatively regulate ODC and polyamine biosynthesis, including the conserved polyamine-induced ribosomal frameshifting that controls its own expression. Accept as the central function of this gene.
|
|
GO:0008073
ornithine decarboxylase inhibitor activity
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: Electronic InterPro2GO annotation assigning the same core molecular function based on the diagnostic ODC antizyme domain (InterPro IPR002993 / Pfam PF02100 / PROSITE PS01337) present in this protein. This corroborates the IBA annotation for the same term and is consistent with the antizyme family. Accept as supporting the core function.
|
id: Q9NHZ4
gene_symbol: oaz
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:54126
label: Pristionchus pacificus
description: >-
Ornithine decarboxylase antizyme (ODC-Az) is a small (142 aa) regulatory
protein and the master negative regulator of cellular polyamine homeostasis.
It binds to monomers of ornithine decarboxylase (ODC), the rate-limiting
enzyme of polyamine biosynthesis, sterically preventing assembly of the
catalytically active ODC homodimer and thereby inhibiting ODC enzymatic
activity. In addition to inhibiting ODC, antizyme targets the bound ODC
monomer for ubiquitin-independent degradation by the 26S proteasome, providing
a second, irreversible layer of down-regulation. Through these activities
antizyme lowers intracellular putrescine, spermidine and spermine levels and
also suppresses cellular polyamine uptake, coupling polyamine biosynthesis and
transport to feedback control. Antizyme synthesis is itself controlled by an
autoregulatory, polyamine-stimulated +1 ribosomal frameshifting event required
to translate the full-length protein from two overlapping open reading frames,
so that high polyamine levels increase antizyme production and thereby
reinforce the negative feedback loop. The protein acts predominantly in the
cytoplasm but can also localize to the nucleus. This regulatory mechanism is
deeply conserved across eukaryotes, from yeast to nematodes to mammals.
existing_annotations:
- term:
id: GO:0005634
label: nucleus
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: >-
Nuclear localization is inferred by phylogenetic propagation from the
antizyme ortholog family (PANTHER PTN001616256), where mammalian antizymes
have been observed to shuttle between cytoplasm and nucleus. This is a
plausible but peripheral localization for the P. pacificus protein; the
defining, growth-regulatory action of antizyme (ODC binding, inhibition
and proteasomal targeting) occurs predominantly in the cytoplasm. Retained
as a valid but non-core cellular component.
action: KEEP_AS_NON_CORE
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: >-
Cytoplasm is the principal site where antizyme binds ODC monomers,
inhibits ODC activity and delivers ODC to the 26S proteasome, consistent
with the well-established antizyme ortholog family. The localization is
correct, but "cytoplasm" is a broad cellular-component term that does not
itself describe the molecular function; retained as a valid non-core
location.
action: KEEP_AS_NON_CORE
- term:
id: GO:0008073
label: ornithine decarboxylase inhibitor activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: >-
This is the core molecular function of antizyme and is strongly supported.
The annotation is propagated phylogenetically from an antizyme ortholog
family with direct experimental evidence (e.g. human and mouse antizymes,
UniProtKB:P54368, O95190, Q9UMX2). The P. pacificus protein belongs to the
ODC antizyme family (Pfam PF02100, InterPro IPR002993) and is documented
to negatively regulate ODC and polyamine biosynthesis, including the
conserved polyamine-induced ribosomal frameshifting that controls its own
expression. Accept as the central function of this gene.
action: ACCEPT
- term:
id: GO:0008073
label: ornithine decarboxylase inhibitor activity
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: enables
review:
summary: >-
Electronic InterPro2GO annotation assigning the same core molecular
function based on the diagnostic ODC antizyme domain (InterPro
IPR002993 / Pfam PF02100 / PROSITE PS01337) present in this protein. This
corroborates the IBA annotation for the same term and is consistent with
the antizyme family. Accept as supporting the core function.
action: ACCEPT
core_functions:
- description: >-
Ornithine decarboxylase inhibitor activity: binds ODC monomers to block
formation of the active ODC homodimer, inhibiting the rate-limiting enzyme of
polyamine biosynthesis and targeting ODC for ubiquitin-independent
proteasomal degradation. This drives negative regulation of polyamine
biosynthesis.
molecular_function:
id: GO:0008073
label: ornithine decarboxylase inhibitor activity
supported_by:
- reference_id: GO_REF:0000033
- reference_id: GO_REF:0000002
directly_involved_in:
- id: GO:0170066
label: negative regulation of polyamine biosynthetic process
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO
terms
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []