PP_2638 is the predicted BcsC outer-membrane cellulose export component of Pseudomonas putida KT2440. An N-terminal TPR-rich region and a C-terminal BcsC barrel domain support a channel that guides nascent cellulose through the periplasm and across the outer membrane. This export role is inferred from target architecture and characterized E. coli BcsC; direct transport measurements and synthase-complex contacts in KT2440 remain unresolved.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0019867 outer membrane | IEA GO_REF:0000002 | ACCEPT | Summary: Outer membrane is the appropriate location for the BcsC-like PP_2638 cellulose synthase operon C protein. Reason: The target contains a BcsC C-terminal barrel-domain signature preceded by TPR repeats. The E. coli BcsC structure directly places the homologous 16-stranded barrel in the outer membrane. Together these support the outer-membrane assignment for KT2440, independently of its submitted protein name or the annotation under review. Supporting Evidence: file:PSEPK/PP_2638/PP_2638-uniprot.txt DR Pfam; PF05420; BCSC_C; 1. PMID:31604608 The membrane-integrated porin domain of BcsC forms a kidney-shaped 16-stranded Ξ²-barrel |
| GO:0030244 cellulose biosynthetic process | IEA GO_REF:0000002 | MODIFY | Summary: Refine the supported cellulose-producing role to bacterial cellulose biosynthesis. Reason: PP_2638 carries the BcsC C-terminal domain (Pfam PF05420 BCSC_C, residues 806-1152) preceded by TPR repeats, the architecture of the BcsC cellulose-export porin. Its role in cellulose production is argued from that family membership; the evidence is for characterized BcsC orthologs (E. coli/Enterobacteriaceae), where BcsC is essential in vivo for cellulose secretion and forms the outer-membrane channel of the Bcs synthase-secretion complex, not a KT2440 assay. BcsC contributes the export step of cellulose production rather than glucan polymerization (done by BcsA). The UniProt FUNCTION and PATHWAY lines are ARBA predictions and are not cited. GO:0090540 is the supported is_a descendant: its added distinction is bacterial context, not a different polymer or a stronger native-output claim. The inferred participation is cellulose export through a bacterial BcsC-family channel, not polymerization or a direct KT2440 secretion assay. Proposed replacements: bacterial cellulose biosynthetic process Supporting Evidence: file:PSEPK/PP_2638/PP_2638-uniprot.txt DR Pfam; PF05420; BCSC_C; 1. file:PSEPK/PP_2638/PP_2638-uniprot.txt DR InterPro; IPR008410; BCSC_C. PMID:31604608 in vivo BcsC is essential for cellulose secretion |
| GO:0015159 polysaccharide transmembrane transporter activity | ISS PMID:31604608 Architecture of the Cellulose Synthase Outer Membrane Channe... | NEW | Summary: BcsC-family architecture supports the missing polysaccharide export activity. Reason: The target combines the BcsC-specific C-terminal barrel domain with a TPR-rich periplasmic region. E. coli structures and functional work identify BcsC as the cellulose outer-membrane conduit; transfer therefore supports polysaccharide transmembrane transporter activity for PP_2638. This is a homolog-based assignment, not direct KT2440 transport. GO:0015288 porin activity is unsuitable because its current definition restricts transported substances to less than 1000 Da; cellulose is a polymer. No ATP-coupled transport mechanism or phosphoethanolamine modification is inferred. Supporting Evidence: file:PSEPK/PP_2638/PP_2638-uniprot.txt DR Pfam; PF05420; BCSC_C; 1. PMID:31604608 pEtN-cellulose is secreted through the Ξ²-barrel porin BcsC PMID:39242554 BcsC interacts with the terminal BcsB subunit of the semicircle to establish an envelope-spanning complex. |
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Download this section (compressed HTML)Q: What is the exact molecular role of PP_2638 in KT2440 cellulose export, pore formation, or synthase-complex assembly?
Q: How does the TPR-rich region couple cellulose passage to BcsA/BcsB synthesis in KT2440, and which contacts are conserved from the engineered E. coli structures?
Experiment: Compare cellulose production, cell-surface cellulose retention, and extracellular cellulose export in wild-type and PP_2638 deletion strains.
Type: targeted genetics and cellulose localization assay
Experiment: Determine PP_2638 localization and complex association with BcsA/BcsB using fractionation and co-immunoprecipitation or proximity tagging.
Type: localization and protein-complex assay
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