algC

UniProt ID: Q88C93
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Review Status: DRAFT
Aliases:
PP_5288
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Gene Description

algC (PP_5288) encodes a bifunctional phosphomannomutase/phosphoglucomutase. It interconverts mannose 6-phosphate with mannose 1-phosphate and glucose 6-phosphate with glucose 1-phosphate, supplying sugar-phosphate precursors for GDP-mannose, lipopolysaccharide, and related cell-envelope carbohydrate biosynthesis. It is not a core ED enzyme but draws on the same hexose-phosphate pools.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000287 magnesium ion binding
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: magnesium ion binding is biologically plausible for this enzyme but is ancillary to the more specific catalytic function.
Reason: Retain as a supporting/non-core annotation rather than using it as the main functional summary.
GO:0004614 phosphoglucomutase activity
IEA
GO_REF:0000120
ACCEPT
Summary: phosphoglucomutase activity is consistent with the curated UniProt name, EC/family evidence, and the gene product role summarized here.
Reason: This is a specific, biologically appropriate annotation for this gene product.
GO:0004615 phosphomannomutase activity
IEA
GO_REF:0000120
ACCEPT
Summary: phosphomannomutase activity is consistent with the curated UniProt name, EC/family evidence, and the gene product role summarized here.
Reason: This is a specific, biologically appropriate annotation for this gene product.
GO:0005975 carbohydrate metabolic process
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: carbohydrate metabolic process is biologically plausible for this enzyme but is ancillary to the more specific catalytic function.
Reason: Retain as a supporting/non-core annotation rather than using it as the main functional summary.
GO:0016868 intramolecular phosphotransferase activity
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: intramolecular phosphotransferase activity is biologically plausible for this enzyme but is ancillary to the more specific catalytic function.
Reason: Retain as a supporting/non-core annotation rather than using it as the main functional summary.
GO:1901137 carbohydrate derivative biosynthetic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: carbohydrate derivative biosynthetic process is biologically plausible for this enzyme but is ancillary to the more specific catalytic function.
Reason: Retain as a supporting/non-core annotation rather than using it as the main functional summary.
GO:0009103 lipopolysaccharide biosynthetic process
IEA
GO_REF:0000041
ACCEPT
Summary: lipopolysaccharide biosynthetic process is consistent with the curated UniProt name, EC/family evidence, and the gene product role summarized here.
Reason: This is a specific, biologically appropriate annotation for this gene product.
GO:0009298 GDP-mannose biosynthetic process
IEA
GO_REF:0000041
ACCEPT
Summary: GDP-mannose biosynthetic process is consistent with the curated UniProt name, EC/family evidence, and the gene product role summarized here.
Reason: This is a specific, biologically appropriate annotation for this gene product.

Core Functions

phosphomannomutase activity supporting the Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8) role summarized for algC.

Supporting Evidence:
  • file:PSEPK/algC/algC-uniprot.txt
    DR GO; GO:0004615; F:phosphomannomutase activity; IEA:UniProtKB-EC.

phosphoglucomutase activity supporting the Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8) role summarized for algC.

Supporting Evidence:
  • file:PSEPK/algC/algC-uniprot.txt
    DR GO; GO:0004614; F:phosphoglucomutase activity; IEA:UniProtKB-EC.

References

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Suggested Questions for Experts

Q: What fraction of glucose 1-phosphate and mannose 1-phosphate flux is supplied by AlgC relative to the dedicated Pgm and CpsG paralogs in KT2440?

Suggested Experiments

Experiment: Compare substrate kinetics for purified AlgC and measure nucleotide-sugar flux in single and combined algC, pgm, and cpsG perturbations.

Type: comparative enzymology and metabolic flux analysis

Deep Research

Asta

(algC-deep-research-asta.md)

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OpenScientist

(algC-deep-research-openscientist.md)

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