bglX

UniProt ID: Q88N13
Organism: Pseudomonas putida KT2440
Review Status: COMPLETE
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Gene Description

bglX encodes a signal-peptide-bearing glycoside hydrolase family 3 protein predicted to act as a periplasmic beta-glucosidase. Its supported role is hydrolysis of terminal non-reducing beta-D-glucosyl residues during carbohydrate utilization; its physiological substrate remains unknown.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: This broad glycoside-hydrolase activity is consistent with the GH3 assignment.
Reason: Beta-glucosidase activity is the more informative core molecular function.
Supporting Evidence:
file:PSEPK/bglX/bglX-uniprot.txt
Belongs to the glycosyl hydrolase 3 family.
GO:0005975 carbohydrate metabolic process
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: Carbohydrate metabolism is correct but too broad to define the core role.
Reason: The predicted beta-glucosidase reaction provides the more useful functional description.
GO:0008422 beta-glucosidase activity
IEA
GO_REF:0000120
ACCEPT
Summary: GH3 family membership and the predicted reaction support beta-glucosidase activity.
Reason: UniProt predicts hydrolysis of terminal non-reducing beta-D-glucosyl residues and identifies a multidomain GH3-family protein.
Supporting Evidence:
file:PSEPK/bglX/bglX-uniprot.txt
Reaction=Hydrolysis of terminal, non-reducing beta-D-glucosyl residues
file:PSEPK/bglX/bglX-uniprot.txt
Belongs to the glycosyl hydrolase 3 family.
GO:0009251 glucan catabolic process
IEA
GO_REF:0000118
KEEP AS NON CORE
Summary: The predicted exo-beta-glucosidase reaction is compatible with glucan catabolism.
Reason: The GH3 architecture and terminal beta-D-glucosyl-residue hydrolysis support breakdown of beta-glucosyl oligosaccharides or glucans, although the physiological substrate has not been identified.
Supporting Evidence:
file:PSEPK/bglX/bglX-uniprot.txt
Reaction=Hydrolysis of terminal, non-reducing beta-D-glucosyl residues
GO:0042597 periplasmic space
IEA
GO_REF:0000044
ACCEPT
Summary: The signal peptide and UniProt localization support the periplasm.
Reason: UniProt predicts an N-terminal signal peptide and periplasmic localization.
Supporting Evidence:
file:PSEPK/bglX/bglX-uniprot.txt
SUBCELLULAR LOCATION: Periplasm
file:PSEPK/bglX/bglX-uniprot.txt
FT SIGNAL 1..20

Core Functions

Predicted periplasmic GH3 beta-glucosidase hydrolyzing terminal non-reducing beta-D-glucosyl residues during carbohydrate catabolism.

Molecular Function:
beta-glucosidase activity
Cellular Locations:
Supporting Evidence:
  • file:PSEPK/bglX/bglX-uniprot.txt
    Belongs to the glycosyl hydrolase 3 family.
  • file:PSEPK/bglX/bglX-uniprot.txt
    DR PROSITE; PS00775; GLYCOSYL_HYDROL_F3; 1.
  • file:PSEPK/bglX/bglX-uniprot.txt
    DR Pfam; PF00933; Glyco_hydro_3; 1.
  • file:PSEPK/bglX/bglX-uniprot.txt
    SIGNAL 1..20

References

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Suggested Questions for Experts

Q: Which beta-glucosides are transported to and hydrolyzed by periplasmic BglX in KT2440?

Suggested Experiments

Experiment: Purify BglX and measure hydrolysis across beta-glucoside and beta-glucan substrates, then test substrate utilization in a bglX deletion strain.

Type: biochemical substrate panel and genetics

Knowledge Gaps

What is not known β€” curated, literature-grounded statements of the open unknowns (the inverse of core functions).

Gap: The physiological beta-glucoside or glucan substrate of bglX is unknown.

OPEN BIOLOGY

What is known: GH3 family membership supports beta-glucosidase chemistry, but does not link bglX to a particular environmental carbohydrate or to flavonoid catabolism.

Significance: Substrate identification is needed to place bglX in a specific catabolic route.

What would resolve it: Purify BglX and test a panel of beta-glucosides and beta-glucans.

Provenance (the field's own admissions):

πŸ“š Additional Documentation

Notes

(bglX-notes.md)

bglX curation notes

  • UniProt assigns Q88N13 to glycoside hydrolase family 3, predicts a signal
    peptide, periplasmic localization, and beta-glucosidase reaction
    [file:PSEPK/bglX/bglX-uniprot.txt "Belongs to the glycosyl hydrolase 3 family"].
  • bglX is not mapped to KEGG ppu00946. It may hydrolyze environmental beta-
    glucosides, but no evidence connects it specifically to the five-step
    naringenin-aglycone pathway.
  • The OpenScientist run ended with a DNS connection failure and produced no
    research artifact. No flavonoid-process annotation is proposed.

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