cysNC

UniProt ID: Q88NA8
Organism: Pseudomonas putida KT2440
Review Status: COMPLETE
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Gene Description

CysNC is the GTPase-containing regulatory subunit 1 of the proteobacterial sulfate adenylyltransferase complex. It couples GTP hydrolysis to the CysD reaction that converts sulfate and ATP to APS. The protein also carries a C-terminal APS-kinase-like domain, but the catalytic contribution of that domain to the KT2440 complex remains unresolved.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000103 sulfate assimilation
IEA
GO_REF:0000104
ACCEPT
Summary: CysNC supplies GTP-coupled sulfate activation.
Reason: GTP hydrolysis by the CysN portion couples energy to the CysD sulfate-adenylation step, directly contributing to sulfate assimilation and downstream sulfide synthesis. Primary structural evidence is from P. syringae and applied by conserved subunit architecture.
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
PMID:16387658
the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).
GO:0003924 GTPase activity
IEA
GO_REF:0000120
ACCEPT
Summary: The CysN domain is a regulatory GTPase.
Reason: The G protein hydrolyzes GTP and couples its turnover to CysD catalysis. This is the intrinsic activity of the subunit, not ATP sulfurylase chemistry carried out in isolation.
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
PMID:16387658
the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).
GO:0004781 sulfate adenylyltransferase (ATP) activity
IEA
GO_REF:0000120
ACCEPT
Summary: CysNC contributes to ATP sulfurylase activity within the complex.
Reason: The complex-level activity is biologically correct: CysNC supplies the coupled GTPase function. The review does not alter machine qualifiers; core_functions records the contribution to the complex reaction separately from intrinsic GTPase activity.
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
PMID:16387658
the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).
GO:0005525 GTP binding
IEA
GO_REF:0000120
ACCEPT
Summary: GTP binding is integral to the regulatory GTPase cycle.
Reason: Nucleotide binding supports the core CysN energy-coupling mechanism, rather than a peripheral function.
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
PMID:16387658
the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).
GO:0006790 sulfur compound metabolic process
IEA
GO_REF:0000002
MODIFY
Summary: Refine sulfur metabolism to sulfate assimilation.
Reason: The known contribution is the activation step of sulfate assimilation; the broad parent is true and should be refined rather than rejected.
Proposed replacements: sulfate assimilation
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
GO:0070814 hydrogen sulfide biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: CysNC supplies GTP-coupled sulfate activation.
Reason: GTP hydrolysis by the CysN portion couples energy to the CysD sulfate-adenylation step, directly contributing to sulfate assimilation and downstream sulfide synthesis. Primary structural evidence is from P. syringae and applied by conserved subunit architecture.
Supporting Evidence:
PMID:16387658
coupling the energy of GTP hydrolysis to APS formation.
PMID:16387658
the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).

Core Functions

Hydrolyzes GTP to drive CysD-dependent sulfate adenylation; the fused APS-kinase-like domain does not establish a PAPS-reduction route.

Molecular Function:
GTPase activity
Directly Involved In:
Supporting Evidence:
  • PMID:16387658
    coupling the energy of GTP hydrolysis to APS formation.
  • PMID:16387658
    the X-ray crystal structure of a complex between Pseudomonas syringae ATPS (CysD) and its associated regulatory G protein (CysN).

References

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Suggested Questions for Experts

Q: Is the C-terminal APS-kinase-like domain of Q88NA8 catalytically active, or is it a retained but inactive fusion remnant in the direct APS-reduction route?

Suggested Experiments

Experiment: Reconstitute Q88NA8/Q88NA9 and quantify both APS and PAPS formation, then test isolated C-terminal-domain and active-site variants for APS kinase activity.

Type: pathway reconstitution and domain-function assay

πŸ“š Additional Documentation

Notes

(cysNC-notes.md)

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