hemH

UniProt ID: Q88PV4
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Review Status: COMPLETE
Aliases:
PP_0744
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Gene Description

HemH is the cytoplasmic ferrochelatase that catalyzes the terminal reaction of heme-b biosynthesis. It inserts ferrous iron into protoporphyrin IX to form protoheme (heme b), supplying the cofactor used by respiratory and other hemoproteins.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004325 protoporphyrin ferrochelatase activity
IEA
GO_REF:0000120
ACCEPT
Summary: This term precisely describes the terminal HemH reaction.
Reason: UniProt assigns EC 4.98.1.1 and explicitly describes ferrous insertion into protoporphyrin IX.
Supporting Evidence:
file:PSEPK/hemH/hemH-uniprot.txt
Catalyzes the ferrous insertion into protoporphyrin IX.
GO:0005737 cytoplasm
IEA
GO_REF:0000120
ACCEPT
Summary: Cytoplasmic localization is explicitly predicted for the KT2440 enzyme.
Reason: UniProt assigns HemH to the cytoplasm and does not predict a membrane anchor.
Supporting Evidence:
file:PSEPK/hemH/hemH-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm
GO:0006779 porphyrin-containing compound biosynthetic process
IEA
GO_REF:0000104
MODIFY
Summary: The broad porphyrin process is correct but can be replaced by the exact product process.
Reason: HemH directly produces heme B, so GO:0006785 is a supported live replacement for this broad porphyrin-biosynthesis annotation.
Proposed replacements: heme B biosynthetic process
Supporting Evidence:
file:PSEPK/hemH/hemH-uniprot.txt
biosynthesis; protoheme from protoporphyrin-IX: step 1/1.
GO:0006783 heme biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: HemH directly performs the final heme-b biosynthetic step.
Reason: Insertion of Fe2+ into protoporphyrin IX creates heme b, so the broader heme-biosynthesis row is correct. GO:0006785 captures the endpoint more specifically in the replacement and core-function records.
Supporting Evidence:
file:PSEPK/hemH/hemH-uniprot.txt
biosynthesis; protoheme from protoporphyrin-IX: step 1/1.

Core Functions

Inserts ferrous iron into protoporphyrin IX to form heme b in the terminal reaction of the pathway.

Directly Involved In:
Cellular Locations:
Supporting Evidence:
  • file:PSEPK/hemH/hemH-uniprot.txt
    Catalyzes the ferrous insertion into protoporphyrin IX.

References

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Suggested Questions for Experts

Q: Which iron-delivery factors supply ferrous iron to HemH in KT2440?

Suggested Experiments

Experiment: Quantify protoporphyrin IX and heme b after conditional hemH depletion, iron perturbation, and complementation.

Hypothesis: HemH is the terminal ferrochelatase required for heme-b production.

Deep Research

OpenScientist

(hemH-deep-research-openscientist.md)

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πŸ“š Additional Documentation

Notes

(hemH-notes.md)

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