leuC

UniProt ID: Q88LE8
Organism: Pseudomonas putida KT2440
Review Status: DRAFT
πŸ“ Provide Detailed Feedback

Gene Description

LeuC is the catalytic large subunit of the LeuC-LeuD 3-isopropylmalate dehydratase. The iron-sulfur enzyme reversibly isomerizes 2-isopropylmalate to 3-isopropylmalate through a dehydration/rehydration sequence in L-leucine biosynthesis.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0003861 3-isopropylmalate dehydratase activity
IEA
GO_REF:0000120
ACCEPT
Summary: This is the specific activity of the LeuC-LeuD enzyme, to which LeuC contributes the catalytic iron-sulfur core.
Reason: EC 4.2.1.33, HAMAP, and LeuC-specific family assignments agree. Because the functional enzyme is a LeuC-LeuD heterodimer, `contributes_to` is a better qualifier than the machine-sourced `enables` for this subunit.
Supporting Evidence:
file:PSEPK/leuC/leuC-uniprot.txt
Full=3-isopropylmalate dehydratase large subunit
file:PSEPK/leuC/leuC-uniprot.txt
Heterodimer of LeuC and LeuD.
file:PSEPK/leuC/leuC-deep-research-openscientist.md
The gene *leuC* (locus PP_1985; UniProt Q88LE8) of *Pseudomonas putida* KT2440 encodes the **large, catalytic subunit of 3-isopropylmalate dehydratase**
GO:0009098 L-leucine biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: LeuC participates in the second leucine-specific step.
Reason: UniProt places the LeuC-LeuD activity at step 2 of 4.
GO:0009316 3-isopropylmalate dehydratase complex
IEA
file:PSEPK/leuC/leuC-uniprot.txt
NEW
Summary: LeuC is the catalytic large subunit of the LeuC-LeuD heterodimer.
Reason: The exact Q88LE8 record identifies the heterodimer, but the fetched GOA snapshot lacks the corresponding complex-membership annotation.
Supporting Evidence:
file:PSEPK/leuC/leuC-uniprot.txt
Heterodimer of LeuC and LeuD.
GO:0043436 oxoacid metabolic process
IEA
GO_REF:0000117
MARK AS OVER ANNOTATED
Summary: This broad process adds no information beyond leucine biosynthesis.
Reason: GO:0009098 captures the specific biological pathway.
GO:0051539 4 iron, 4 sulfur cluster binding
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: The LeuC catalytic subunit carries the 4Fe-4S cluster.
Reason: The aconitase-family active-site architecture supports this cofactor assignment.

Core Functions

Catalytic, 4Fe-4S-containing large subunit of the LeuC-LeuD 3-isopropylmalate dehydratase in leucine biosynthesis.

Supporting Evidence:
  • file:PSEPK/leuC/leuC-uniprot.txt
    Full=3-isopropylmalate dehydratase large subunit
  • file:PSEPK/leuC/leuC-uniprot.txt
    Heterodimer of LeuC and LeuD.
  • file:PSEPK/leuC/leuC-deep-research-openscientist.md
    The gene *leuC* (locus PP_1985; UniProt Q88LE8) of *Pseudomonas putida* KT2440 encodes the **large, catalytic subunit of 3-isopropylmalate dehydratase**

References

Loading supporting content…

Download this section (compressed HTML)

Deep Research

OpenScientist

(leuC-deep-research-openscientist.md)

Loading supporting content…

Download this section (compressed HTML)

πŸ“„ View Raw YAML

Loading supporting content…

Download this section (compressed HTML)