leuD

UniProt ID: Q88LE7
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Review Status: DRAFT
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Gene Description

LeuD is the required small swivel subunit of the LeuC-LeuD 3-isopropylmalate dehydratase. The heterodimer isomerizes 2-isopropylmalate to 3-isopropylmalate in the second dedicated reaction of L-leucine biosynthesis.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0003861 3-isopropylmalate dehydratase activity
IEA
GO_REF:0000120
ACCEPT
Summary: LeuD is a required, non-catalytic subunit that contributes to the heterodimeric enzyme carrying this activity.
Reason: EC 4.2.1.33, HAMAP, and LeuD-specific family assignments agree. Because LeuD has no independent catalytic activity, `contributes_to` is a better qualifier than the machine-sourced `enables` for this subunit.
Supporting Evidence:
file:PSEPK/leuD/leuD-uniprot.txt
Full=3-isopropylmalate dehydratase small subunit
file:PSEPK/leuD/leuD-uniprot.txt
Heterodimer of LeuC and LeuD.
file:PSEPK/leuD/leuD-deep-research-openscientist.md
It has **no independent catalytic activity**; instead it forms an **obligate 1:1 heterodimer with the large subunit LeuC (PP_1985)**.
GO:0009098 L-leucine biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: LeuD participates in the second leucine-specific step.
Reason: UniProt places the LeuC-LeuD heterodimer at step 2 of 4.
GO:0009316 3-isopropylmalate dehydratase complex
IEA
GO_REF:0000002
ACCEPT
Summary: This accurately records the defining LeuC-LeuD heterodimer membership.
Reason: LeuD has no independent catalytic activity; its required role is realized as the small subunit of this complex.
Supporting Evidence:
file:PSEPK/leuD/leuD-uniprot.txt
Heterodimer of LeuC and LeuD.

Core Functions

Required small swivel subunit of the LeuC-LeuD 3-isopropylmalate dehydratase in leucine biosynthesis.

Supporting Evidence:
  • file:PSEPK/leuD/leuD-uniprot.txt
    Full=3-isopropylmalate dehydratase small subunit
  • file:PSEPK/leuD/leuD-uniprot.txt
    Heterodimer of LeuC and LeuD.
  • file:PSEPK/leuD/leuD-deep-research-openscientist.md
    It has **no independent catalytic activity**; instead it forms an **obligate 1:1 heterodimer with the large subunit LeuC (PP_1985)**.

References

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Deep Research

OpenScientist

(leuD-deep-research-openscientist.md)

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