mobA

UniProt ID: Q88HA3
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Review Status: DRAFT
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Gene Description

mobA encodes the cytoplasmic molybdenum-cofactor guanylyltransferase that transfers GMP from GTP to Mo-molybdopterin, producing the MGD cofactor variant used by a subset of molybdoenzymes. This is an optional nucleotide-maturation branch downstream of conserved Mo-MPT formation.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0003824 catalytic activity
IEA
GO_REF:0000002
MODIFY
Summary: Generic catalytic activity should be replaced by the exact MobA reaction.
Reason: Reviewed UniProt/HAMAP assigns EC 2.7.7.77 Mo-MPT guanylyltransferase activity.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- FUNCTION: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) CC cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine CC dinucleotide (Mo-MGD) cofactor. {ECO:0000255|HAMAP-Rule:MF_00316}.
GO:0005525 GTP binding
IEA
GO_REF:0000104
KEEP AS NON CORE
Summary: GTP binding is valid substrate binding but less informative than the catalytic term.
Reason: GTP donates GMP in the reviewed MobA reaction.
GO:0005737 cytoplasm
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Cytoplasmic localization is appropriate for this soluble cofactor-maturation enzyme.
Reason: Q88HA3 lacks membrane/export features and acts on soluble Mo-MPT.
GO:0006777 Mo-molybdopterin cofactor biosynthetic process
IEA
GO_REF:0000002
ACCEPT
Summary: MobA participates in the optional nucleotide-maturation branch of Mo-molybdopterin cofactor biosynthesis.
Reason: The exact MobA reaction produces the Mo-MGD cofactor variant, so this broad biosynthetic-process term is accurate without asserting downstream bis-MGD assembly.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- FUNCTION: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) CC cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine CC dinucleotide (Mo-MGD) cofactor. {ECO:0000255|HAMAP-Rule:MF_00316}.
GO:0016779 nucleotidyltransferase activity
IEA
GO_REF:0000120
MODIFY
Summary: The generic nucleotidyltransferase term should be replaced by the exact MobA activity.
Reason: UniProt specifies GMP transfer from GTP to Mo-MPT.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- CATALYTIC ACTIVITY: CC Reaction=Mo-molybdopterin + GTP + H(+) = Mo-molybdopterin guanine CC dinucleotide + diphosphate; Xref=Rhea:RHEA:34243, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:33019, ChEBI:CHEBI:37565, ChEBI:CHEBI:71302, CC ChEBI:CHEBI:71310; EC=2.7.7.77; Evidence={ECO:0000255|HAMAP- CC Rule:MF_00316};
GO:0019720 Mo-molybdopterin cofactor metabolic process
IEA
GO_REF:0000104
MARK AS OVER ANNOTATED
Summary: This broad metabolic-process parent is less precise than the retained Mo-molybdopterin cofactor biosynthetic-process annotation.
Reason: GO:0006777 more specifically captures the biosynthetic context of MobA-catalyzed Mo-MGD formation.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- FUNCTION: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) CC cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine CC dinucleotide (Mo-MGD) cofactor. {ECO:0000255|HAMAP-Rule:MF_00316}.
GO:0061603 molybdenum cofactor guanylyltransferase activity
IEA
GO_REF:0000120
ACCEPT
Summary: This is the exact core molecular function of MobA.
Reason: The reviewed entry provides Rhea:34243 and EC 2.7.7.77 for Mo-MPT guanylylation.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- CATALYTIC ACTIVITY: CC Reaction=Mo-molybdopterin + GTP + H(+) = Mo-molybdopterin guanine CC dinucleotide + diphosphate; Xref=Rhea:RHEA:34243, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:33019, ChEBI:CHEBI:37565, ChEBI:CHEBI:71302, CC ChEBI:CHEBI:71310; EC=2.7.7.77; Evidence={ECO:0000255|HAMAP- CC Rule:MF_00316};
file:PSEPK/mobA/mobA-deep-research-openscientist.md
GTP + Mo-MPT --(MobA, Mg2+)--> MGD + PPi
GO:0070568 guanylyltransferase activity
IEA
GO_REF:0000104
MODIFY
Summary: The broad guanylyltransferase term should be replaced by the Mo-cofactor-specific child term.
Reason: The acceptor is specifically Mo-molybdopterin.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- FUNCTION: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) CC cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine CC dinucleotide (Mo-MGD) cofactor. {ECO:0000255|HAMAP-Rule:MF_00316}.
GO:1902758 bis(molybdopterin guanine dinucleotide)molybdenum biosynthetic process
IEA
GO_REF:0000118
MARK AS OVER ANNOTATED
Summary: The bis-MGD-specific process extends beyond the one-MGD product of the MobA reaction.
Reason: Reviewed target UniProt supports Mo-MGD formation but does not establish downstream bis-MGD assembly by MobA.
Supporting Evidence:
file:PSEPK/mobA/mobA-uniprot.txt
CC -!- CATALYTIC ACTIVITY: CC Reaction=Mo-molybdopterin + GTP + H(+) = Mo-molybdopterin guanine CC dinucleotide + diphosphate; Xref=Rhea:RHEA:34243, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:33019, ChEBI:CHEBI:37565, ChEBI:CHEBI:71302, CC ChEBI:CHEBI:71310; EC=2.7.7.77; Evidence={ECO:0000255|HAMAP- CC Rule:MF_00316};

Core Functions

Transfer of GMP from GTP to Mo-MPT to form the MGD cofactor variant.

Supporting Evidence:
  • file:PSEPK/mobA/mobA-uniprot.txt
    FUNCTION: Transfers a GMP moiety from GTP
  • file:PSEPK/mobA/mobA-deep-research-openscientist.md
    GTP + Mo-MPT --(MobA, Mg2+)--> MGD + PPi

References

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Suggested Experiments

Experiment: Quantify Mo-MGD formation by purified Q88HA3 and test complementation of an MGD-dependent molybdoenzyme phenotype in a mobA deletion strain.

Type: enzyme assay and genetic complementation

Deep Research

OpenScientist

(mobA-deep-research-openscientist.md)

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πŸ“š Additional Documentation

Notes

(mobA-notes.md)

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