murG

UniProt ID: Q88N76
Organism: Pseudomonas putida KT2440
Review Status: DRAFT
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Gene Description

MurG is the peripheral inner-membrane glycosyltransferase that forms lipid II in Pseudomonas putida KT2440. On the cytoplasmic face of the membrane it transfers N-acetylglucosamine from UDP-GlcNAc to lipid I, producing the disaccharide-pentapeptide precursor exported for peptidoglycan polymerization.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005886 plasma membrane
IEA
GO_REF:0000120
ACCEPT
Summary: Correct location at the cytoplasmic face of the bacterial inner membrane.
Reason: UniProt identifies MurG as a peripheral inner-membrane protein.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
SUBCELLULAR LOCATION: Cell inner membrane
GO:0005975 carbohydrate metabolic process
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: Broad process annotation that obscures lipid II synthesis.
Reason: MurG acts specifically in peptidoglycan biosynthesis.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
GO:0009252 peptidoglycan biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: Correct core biological process.
Reason: UniProt places Q88N76 in peptidoglycan biosynthesis.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
GO:0016757 glycosyltransferase activity
IEA
GO_REF:0000118
KEEP AS NON CORE
Summary: True catalytic parent of MurG's GlcNAc transfer to lipid I.
Reason: GO:0016757 is a direct is_a ancestor of GO:0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity, which MurG already carries, and UniProt describes the transfer of a GlcNAc moiety from UDP-GlcNAc to lipid I. The parent term is therefore simply true; per the audit rules an ancestor whose specific descendant is already annotated is retained as non-core rather than marked over-annotated.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
FUNCTION: Cell wall formation. Catalyzes the transfer of a GlcNAc
GO:0016758 hexosyltransferase activity
IEA
GO_REF:0000120
MARK AS OVER ANNOTATED
Summary: Broad catalytic parent of the exact MurG activity.
Reason: The target reaction is known at substrate level, so generic hexosyltransferase activity is redundant.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
FUNCTION: Cell wall formation. Catalyzes the transfer of a GlcNAc
GO:0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
IEA
GO_REF:0000120
MARK AS OVER ANNOTATED
Summary: Correct MurG activity at a slightly broader substrate-description level.
Reason: GO:0051991 captures the exact DAP-containing lipid I substrate recorded for KT2440 and is preferred for the gene-level core function.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-
GO:0051991 UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity
IEA
GO_REF:0000116
ACCEPT
Summary: Correct substrate-specific core molecular function.
Reason: The Rhea-mapped term matches the recorded transfer of GlcNAc from UDP-GlcNAc to the DAP-containing lipid I precursor.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
Reaction=di-trans,octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-
file:PSEPK/murG/murG-deep-research-openscientist.md
MurG is a UDP-GlcNAc:lipid I Ξ²-1,4-GlcNAc transferase producing lipid II (EC 2.4.1.227).
GO:1901137 carbohydrate derivative biosynthetic process
IEA
GO_REF:0000117
MARK AS OVER ANNOTATED
Summary: Broad process annotation that obscures the defined cell-wall pathway.
Reason: Peptidoglycan biosynthesis is the direct and informative process for MurG.
Supporting Evidence:
file:PSEPK/murG/murG-uniprot.txt
PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.

Core Functions

Transfers N-acetylglucosamine from UDP-GlcNAc to DAP-containing lipid I, forming lipid II on the cytoplasmic face of the inner membrane.

Supporting Evidence:
  • file:PSEPK/murG/murG-uniprot.txt
    FUNCTION: Cell wall formation. Catalyzes the transfer of a GlcNAc
  • file:PSEPK/murG/murG-deep-research-openscientist.md
    MurG is a UDP-GlcNAc:lipid I Ξ²-1,4-GlcNAc transferase producing lipid II (EC 2.4.1.227).

References

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Suggested Questions for Experts

Q: How is KT2440 MurG recruited or retained at active peptidoglycan synthesis sites?

Suggested Experiments

Experiment: Track functional fluorescent MurG fusions during growth and perturbations, and test interactions with MraY, MurJ, and divisome proteins.

Deep Research

OpenScientist

(murG-deep-research-openscientist.md)

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πŸ“š Additional Documentation

Notes

(murG-notes.md)

murG curation notes

Q88N76/PP_1337 forms lipid II by transferring GlcNAc to lipid I on the
cytoplasmic face of the inner membrane
[UniProtKB:Q88N76, "FUNCTION: Cell wall formation. Catalyzes the transfer of a
GlcNAc"; "SUBCELLULAR LOCATION: Cell inner membrane"].

The DAP-specific Rhea term is used for the KT2440 gene-level core function.
Generic glycosyltransferase terms and broad carbohydrate-process terms are
modified to the exact reaction or peptidoglycan biosynthesis. The reusable
module retains the shorter MurG activity term so it is not restricted to one
stem-peptide chemistry.

πŸ“„ View Raw YAML

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