Cdc15 (SPAC20G8.05c) is the founding member of the PCH/F-BAR (Pombe Cdc15 Homology) protein family and an essential membrane-cytoskeleton scaffolding protein required for cytokinesis in fission yeast. It has a three-part domain architecture: an N-terminal FCH/F-BAR membrane-binding module, a central intrinsically disordered region (IDR) that is uniquely essential and heavily phosphoregulated, and a C-terminal SH3 protein-interaction domain. Its core molecular role is to couple the plasma membrane to actomyosin contractile-ring components and regulators, thereby driving assembly, anchoring, and integrity of the contractile ring at the cell division site. The F-BAR domain binds membrane phospholipids and provides a protein-binding platform that directly recruits the formin Cdc12 (and type-I myosin Myo1), while the SH3 domain (partly redundant with the SH3 of the paralog Imp2) recruits ring-stabilizing proteins such as Pxl1 (paxillin) and Fic1. Cdc15 is hyperphosphorylated in interphase (localizing to cortical patches at cell tips) and becomes hypophosphorylated during mitosis/cytokinesis (relocalizing to the medial contractile ring); dephosphorylation (involving the Clp1/Cdc14-family phosphatase) promotes an assembly-competent open conformation, increased membrane binding, oligomerization, and phase separation, whereas multiple polarity kinases (Pom1, Kin1, Shk1/Pak1, Pck1) phosphorylate the IDR to antagonize condensation and ring assembly. Note that S. pombe Cdc15 is an F-BAR/SH3 scaffold and is NOT a protein kinase (unlike the unrelated budding-yeast Cdc15 of the Mitotic Exit Network).
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005886
plasma membrane
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Cdc15 binds the plasma membrane via its F-BAR domain and acts at the
cytoplasmic face of the plasma membrane, where it anchors the contractile
ring. This localization is well supported and phosphoregulated.
Reason: Core localization for an F-BAR membrane-binding scaffold; consistent with phospholipid binding and membrane-anchor activity annotations.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
couple the plasma membrane to contractile-ring components and regulators
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: Cdc15 has a cytosolic pool, particularly in interphase, but its functionally
relevant localizations are the cell tips (interphase) and the medial
cortex/contractile ring (mitosis). The bare cytoplasm term is correct but
uninformative relative to the specific cortical/ring localizations.
Reason: Generic compartment; subsumed by more specific cortical and division-site localizations that capture the functional sites of action.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Dephosphorylation correlates with relocalization from mainly cytosolic/interphase pools to the division site
|
|
GO:0032153
cell division site
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Cdc15 accumulates at the medial cortex/cell division site during
mitosis/cytokinesis, where it scaffolds the contractile ring. This is a
core localization.
Reason: Core site of Cdc15 function; the contractile ring assembles and constricts at the cell division site.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
In **mitosis/cytokinesis**, it accumulates at the **medial cortex/contractile ring**
|
|
GO:0007010
cytoskeleton organization
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: Cdc15 organizes the actomyosin contractile ring, a cytoskeletal structure.
The specific term mitotic actomyosin contractile ring assembly (GO:1903475)
captures this more precisely; the generic parent is retained as non-core.
Reason: General parent process; the specific contractile-ring assembly term is the core biological process.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
assembly, anchoring, and integrity of the actomyosin contractile ring
|
|
GO:0005543
phospholipid binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: The Cdc15 F-BAR domain binds membrane phospholipids; its concave surface
engages the membrane while the opposite surface binds protein ligands. This
is a core molecular function of the F-BAR scaffold.
Reason: Direct membrane phospholipid binding by the F-BAR domain is a core molecular function underlying membrane anchoring.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
The **concave F-BAR surface** binds membranes, while the **opposite surface** binds protein ligands
|
|
GO:0120104
mitotic actomyosin contractile ring, proximal layer
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Nanoscale architecture studies place Cdc15 in the membrane-proximal layer of
the contractile ring, consistent with its role linking the ring to the
plasma membrane. This is a precise and appropriate localization.
Reason: Cdc15 is a membrane-proximal ring component that anchors the ring to the plasma membrane.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
physically linking the ring to the plasma membrane
|
|
GO:0005543
phospholipid binding
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: F-BAR-mediated phospholipid binding is supported experimentally and by domain
inference; consistent with the IBA annotation to the same term.
Reason: Core molecular function; matches experimentally supported F-BAR membrane binding.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
a dimeric/oligomeric membrane-binding module
|
|
GO:0005856
cytoskeleton
|
IEA
GO_REF:0000044 |
KEEP AS NON CORE |
Summary: Cdc15 associates with the actomyosin contractile ring (a cytoskeletal
structure). The specific contractile-ring CC terms (GO:0110085, GO:0120104)
are more informative; the generic parent is non-core.
Reason: Overly general; specific contractile-ring localizations capture the functional site.
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: This is the central molecular function of Cdc15: it couples the plasma
membrane to the actomyosin contractile ring, linking a cytoskeletal
structure to the membrane via its F-BAR domain. Strongly supported across
multiple lines of evidence.
Reason: Core molecular function of the F-BAR scaffold; membrane-cytoskeleton anchoring.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
couple the plasma membrane to contractile-ring components and regulators
|
|
GO:0120104
mitotic actomyosin contractile ring, proximal layer
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: Cdc15 occupies the membrane-proximal layer of the contractile ring; consistent
with the IBA and IDA annotations to this term.
Reason: Core membrane-proximal ring localization.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
physically linking the ring to the plasma membrane
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: Cdc15 is an early, abundant contractile-ring component essential for ring
assembly; it provides a membrane-associated scaffold that recruits and
organizes the ring machinery (including the formin Cdc12). This is a core
biological process.
Reason: Core biological process; Cdc15 drives contractile-ring assembly.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
early and abundant** contractile-ring component and is **essential for cytokinesis**
|
|
GO:0005515
protein binding
|
IPI
PMID:12939254 The PCH family protein, Cdc15p, recruits two F-actin nucleat... |
MARK AS OVER ANNOTATED |
Summary: Cdc15 directly binds multiple ring proteins (formin Cdc12, type-I myosin
Myo1, Pxl1, Fic1) via its F-BAR and SH3 domains, coordinating two F-actin
nucleation pathways for ring formation. While the underlying interactions are
real and important, the bare protein binding term is uninformative and is
better captured by the membrane-anchor activity and specific recruitment
annotations.
Reason: The bare protein binding term is uninformative; the specific scaffolding/recruitment functions are captured by GO:0106006 and the contractile-ring assembly terms.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
implicated as recruited via the F-BAR region in the prevailing model of medial F-actin nucleation factor recruitment
|
|
GO:0005515
protein binding
|
IPI
PMID:19474789 A spatial gradient coordinates cell size and mitotic entry i... |
MARK AS OVER ANNOTATED |
Summary: Generic protein-binding annotation. Cdc15 relevant interactions (e.g., with
polarity kinases and ring components) are better represented by specific
molecular-function and process terms.
Reason: Uninformative protein binding; superseded by specific functional terms.
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
EXP
PMID:15933715 Etd1p is a novel protein that links the SIN cascade with cyt... |
ACCEPT |
Summary: Experimental support for Cdc15 acting as a membrane-cytoskeleton anchor at
the division site; consistent with the core molecular function.
Reason: Core molecular function with experimental support.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
membraneβcytoskeleton scaffolding protein
|
|
GO:0005515
protein binding
|
IPI
PMID:35108037 Fission yeast paxillin contains two Cdc15 binding motifs for... |
MARK AS OVER ANNOTATED |
Summary: This annotation reflects the direct Cdc15-Pxl1 (paxillin) interaction; Pxl1
contains two Cdc15-binding motifs for robust recruitment to the ring. The
specific interaction is captured by membrane-anchor/recruitment terms; the
bare protein binding term is uninformative.
Reason: Uninformative protein binding; the Pxl1 recruitment role is captured by the membrane-anchor and ring-assembly annotations.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
recruited via SH3 domains of Cdc15 and Imp2
|
|
GO:0061171
establishment of bipolar cell polarity
|
IMP
PMID:23093943 Cytokinesis-based constraints on polarized cell growth in fi... |
KEEP AS NON CORE |
Summary: Cdc15 localizes to cell tips in interphase and cytokinesis imposes constraints
on polarized growth (new-end take-off), but bipolar polarity establishment is
a downstream/pleiotropic consequence rather than Cdc15 core cytokinetic
scaffolding function.
Reason: Pleiotropic developmental/polarity process secondary to the core cytokinesis function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
cortical patches at the cell tips
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IPI
PMID:23093943 Cytokinesis-based constraints on polarized cell growth in fi... |
ACCEPT |
Summary: Membrane-anchor molecular function supported by interaction evidence;
consistent with the core function of Cdc15.
Reason: Core molecular function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
couple the plasma membrane to contractile-ring components and regulators
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
EXP
PMID:32101481 DYRK kinase Pom1 drives F-BAR protein Cdc15 from the membran... |
ACCEPT |
Summary: Pom1 (a DYRK-family kinase) phosphorylates Cdc15 to drive it from the membrane,
regulating the membrane-anchor function; the underlying anchor activity is core.
Reason: Core molecular function; phosphoregulation modulates membrane association.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Multiple kinases contribute (Pom1, Kin1, Shk1/Pak1, Pck1)
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
EXP
PMID:25428987 The Cdc15 and Imp2 SH3 domains cooperatively scaffold a netw... |
ACCEPT |
Summary: The Cdc15 and Imp2 SH3 domains cooperatively scaffold a network of ring
proteins; the membrane-anchor activity is the core molecular function.
Reason: Core molecular function with experimental support.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
SH3 domains of Cdc15 and Imp2 cooperatively recruit Pxl1 and Fic1
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IMP
PMID:24127216 The formins Cdc12 and For3 cooperate during contractile ring... |
ACCEPT |
Summary: Cdc15-dependent recruitment of the formin Cdc12 (cooperating with For3) for
ring assembly relies on the membrane-anchor scaffold function.
Reason: Core molecular function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Cdc15 directly binds Cdc12, and Cdc12 binding is phosphorylation-state dependent
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
EXP
PMID:33357436 Opposite Surfaces of the Cdc15 F-BAR Domain Create a Membran... |
ACCEPT |
Summary: Structural work shows opposite surfaces of the Cdc15 F-BAR create a membrane
platform: the concave surface binds membrane, the opposite surface binds
protein ligands (e.g., Cdc12). This directly demonstrates the membrane-anchor
molecular function.
Reason: Core molecular function directly demonstrated structurally.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Cdc15 F-BAR domain contains a defined Cdc12-binding surface with micromolar affinity
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IDA
PMID:33357436 Opposite Surfaces of the Cdc15 F-BAR Domain Create a Membran... |
ACCEPT |
Summary: Direct assay support for the F-BAR membrane platform that coordinates
cytoskeletal and signaling components; core molecular function.
Reason: Core molecular function directly assayed.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
The **concave F-BAR surface** binds membranes, while the **opposite surface** binds protein ligands
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IMP
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: Mutational analysis shows oligomerization (not membrane bending) underlies
Cdc15 function; the membrane-anchor activity remains core. F-BAR oligomerization
is important for stable ring architecture.
Reason: Core molecular function; oligomerization-dependent membrane anchoring.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
F-BAR oligomerization is important for stable ring architecture
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
EXP
PMID:25688133 The F-BAR Cdc15 promotes contractile ring formation through ... |
ACCEPT |
Summary: The F-BAR Cdc15 promotes ring formation through direct recruitment of the
formin Cdc12 to the membrane; this depends on the membrane-anchor scaffold
function.
Reason: Core molecular function with experimental support.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
recruiting factors (including the formin Cdc12) and physically linking the ring to the plasma membrane
|
|
GO:0005515
protein binding
|
IPI
PMID:24790095 Characterization of the roles of Blt1p in fission yeast cyto... |
MARK AS OVER ANNOTATED |
Summary: Reflects an interaction detected in studies of Blt1 (a ring/node component).
Generic protein binding is uninformative relative to the specific
scaffolding functions.
Reason: Uninformative protein binding; superseded by specific functional terms.
|
|
GO:0032178
medial membrane band
|
IDA
PMID:31276301 A unique kinesin-like protein, Klp8, is involved in mitosis ... |
ACCEPT |
Summary: Cdc15 localizes to the medial membrane band at the division site, consistent
with its membrane-proximal contractile-ring localization.
Reason: Core medial division-site localization.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
it accumulates at the **medial cortex/contractile ring**
|
|
GO:0005515
protein binding
|
IPI
PMID:23615450 Separate roles of IQGAP Rng2p in forming and constricting th... |
MARK AS OVER ANNOTATED |
Summary: Reflects interaction with the IQGAP Rng2, a node/ring component detected in
the Cdc15 phosphorylation-dependent interactome. Generic protein binding is
uninformative.
Reason: Uninformative protein binding; the Rng2 interaction is captured by the ring-assembly and anchor annotations.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Additional partners detected in a phosphorylation-dependent interactome context include **Cyk3** and **Rng2**
|
|
GO:0071341
medial cortical node
|
IDA
PMID:16864655 Assembly of the cytokinetic contractile ring from a broad ba... |
ACCEPT |
Summary: The contractile ring assembles from a broad band of medial cortical nodes;
Cdc15 is a node/ring component. This is a core localization.
Reason: Core localization; nodes are precursors of the contractile ring.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
helps recruit and organize ring machinery
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:16864655 Assembly of the cytokinetic contractile ring from a broad ba... |
ACCEPT |
Summary: Cdc15 is a bona fide component of the mitotic actomyosin contractile ring;
directly observed at the ring. Core localization.
Reason: Core localization; Cdc15 is an integral contractile-ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
early and abundant** contractile-ring component
|
|
GO:0005543
phospholipid binding
|
IDA
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: Direct assay support for Cdc15 F-BAR phospholipid binding; core molecular
function.
Reason: Core molecular function directly assayed.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
a dimeric/oligomeric membrane-binding module
|
|
GO:0009898
cytoplasmic side of plasma membrane
|
IDA
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: Cdc15 acts on the cytoplasmic (inner) face of the plasma membrane, where its
F-BAR domain binds the membrane and anchors the ring. Precise and core
localization.
Reason: Core localization; the F-BAR binds the inner leaflet of the plasma membrane.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
The **concave F-BAR surface** binds membranes
|
|
GO:0032153
cell division site
|
IDA
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: Direct observation of Cdc15 at the cell division site; core localization.
Reason: Core site of Cdc15 function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
scaffolding at the division site
|
|
GO:0097753
membrane bending
|
IMP
NOT
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: This is a NOT annotation. Although F-BAR proteins are canonically associated
with membrane curvature, the study demonstrates that oligomerization, NOT
membrane bending, underlies Cdc15 function in cytokinesis. The negation is
therefore correct: Cdc15 does not require membrane-bending activity for its
essential cytokinetic role.
Reason: The negation is correct and informative; oligomerization rather than membrane bending underlies Cdc15 function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
F-BAR oligomerization is important for stable ring architecture
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:16687577 Cell cycle-dependent roles for the FCH-domain protein Cdc15p... |
ACCEPT |
Summary: Cell-cycle-dependent imaging directly places Cdc15 at the actomyosin ring
during mitosis; core localization.
Reason: Core localization; integral contractile-ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial contractile ring during mitosis
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IGI
PMID:16687577 Cell cycle-dependent roles for the FCH-domain protein Cdc15p... |
ACCEPT |
Summary: Genetic interaction evidence that Cdc15 is required for actomyosin ring
formation; core biological process.
Reason: Core biological process; Cdc15 is essential for ring assembly.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
early and abundant** contractile-ring component and is **essential for cytokinesis**
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IMP
PMID:25688133 The F-BAR Cdc15 promotes contractile ring formation through ... |
ACCEPT |
Summary: Cdc15 promotes ring formation through direct recruitment of the formin Cdc12;
core biological process.
Reason: Core biological process with mutant-phenotype support.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
recruiting factors (including the formin Cdc12) and physically linking the ring to the plasma membrane
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IPI
PMID:29343550 Cdk1-dependent phosphoinhibition of a formin-F-BAR interacti... |
ACCEPT |
Summary: Cdk1-dependent phosphoinhibition of the formin-F-BAR (Cdc12-Cdc15) interaction
regulates ring formation; the underlying anchor/recruitment activity is core.
Reason: Core molecular function; phosphoregulated Cdc12 recruitment.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
hypophosphorylated Cdc15 binds; hyperphosphorylated binds poorly
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
EXP
PMID:29343550 Cdk1-dependent phosphoinhibition of a formin-F-BAR interacti... |
ACCEPT |
Summary: Phosphoregulation of the Cdc12-Cdc15 interaction opposes contractile-ring
formation; core biological process.
Reason: Core biological process.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Cdc12 binding is phosphorylation-state dependent
|
|
GO:0071341
medial cortical node
|
IDA
PMID:21422229 Assembly and architecture of precursor nodes during fission ... |
ACCEPT |
Summary: Cdc15 is part of precursor nodes that assemble into the contractile ring;
core localization.
Reason: Core localization; nodes are ring precursors.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
helps recruit and organize ring machinery
|
|
GO:0030479
actin cortical patch
|
IDA
PMID:21885283 Distinct roles for F-BAR proteins Cdc15p and Bzz1p in actin ... |
KEEP AS NON CORE |
Summary: Cdc15 (with Bzz1) has a distinct role in actin polymerization at sites of
endocytosis, localizing to actin cortical patches. This endocytic role is a
genuine but non-core moonlighting function relative to its essential
cytokinetic scaffolding.
Reason: Endocytosis-associated cortical-patch localization is a secondary function distinct from the core cytokinetic role.
|
|
GO:0072583
clathrin-dependent endocytosis
|
IMP
PMID:21885283 Distinct roles for F-BAR proteins Cdc15p and Bzz1p in actin ... |
KEEP AS NON CORE |
Summary: Cdc15 contributes to actin polymerization at endocytic sites alongside the
F-BAR protein Bzz1. This is a non-core function distinct from the essential
cytokinetic scaffolding role.
Reason: Moonlighting endocytic function; not the core cytokinesis role.
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:21885283 Distinct roles for F-BAR proteins Cdc15p and Bzz1p in actin ... |
ACCEPT |
Summary: Cdc15 directly observed at the contractile ring; core localization.
Reason: Core localization; integral ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial cortex/contractile ring
|
|
GO:0120104
mitotic actomyosin contractile ring, proximal layer
|
IDA
PMID:28914606 Nanoscale architecture of the Schizosaccharomyces pombe cont... |
ACCEPT |
Summary: Nanoscale architecture analysis directly places Cdc15 in the membrane-proximal
layer of the contractile ring; core localization.
Reason: Core membrane-proximal ring localization, directly observed.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
physically linking the ring to the plasma membrane
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IPI
PMID:19139265 The SH3 domains of two PCH family members cooperate in assem... |
ACCEPT |
Summary: The SH3 domains of two PCH family members (Cdc15 and Imp2) cooperate in
assembling the contractile ring; the membrane-anchor activity is core.
Reason: Core molecular function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
partly **redundant with the SH3 domain of the paralog Imp2**
|
|
GO:0106006
cytoskeletal protein-membrane anchor activity
|
IMP
PMID:28784611 Phosphoinositide-mediated ring anchoring resists perpendicul... |
ACCEPT |
Summary: Phosphoinositide-mediated ring anchoring resists perpendicular forces to
promote medial cytokinesis; the Cdc15 membrane-anchor activity is central to
this mechanical anchoring.
Reason: Core molecular function; mechanical anchoring of the ring to the membrane.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Coupling membrane remodeling and cytoskeletal force generation
|
|
GO:0030479
actin cortical patch
|
IDA
PMID:14602073 Spatial and temporal pathway for assembly and constriction o... |
KEEP AS NON CORE |
Summary: Cdc15 observed at actin cortical patches; consistent with its endocytosis-
associated localization. Non-core relative to the cytokinetic scaffold role.
Reason: Cortical-patch localization tied to the non-core endocytic function.
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:14602073 Spatial and temporal pathway for assembly and constriction o... |
ACCEPT |
Summary: Spatiotemporal pathway analysis directly places Cdc15 at the contractile ring
during assembly and constriction; core localization.
Reason: Core localization; integral ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
early and abundant** contractile-ring component
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:18378776 The Clp1/Cdc14 phosphatase contributes to the robustness of ... |
ACCEPT |
Summary: Cdc15 at the contractile ring in the context of Clp1/Cdc14 phosphatase and
Mid1; core localization.
Reason: Core localization; integral ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial contractile ring during mitosis
|
|
GO:0005515
protein binding
|
IPI
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
MARK AS OVER ANNOTATED |
Summary: Generic protein-binding annotation arising from interaction assays in the
oligomerization study. The functional interactions are captured by the
membrane-anchor and ring annotations.
Reason: Uninformative protein binding; superseded by specific functional terms.
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IMP
PMID:26702831 Oligomerization but Not Membrane Bending Underlies the Funct... |
ACCEPT |
Summary: Cdc15 oligomerization underlies its function in contractile-ring assembly;
core biological process.
Reason: Core biological process.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
F-BAR oligomerization is important for stable ring architecture
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:24790095 Characterization of the roles of Blt1p in fission yeast cyto... |
ACCEPT |
Summary: Cdc15 at the contractile ring in the context of Blt1 characterization; core
localization.
Reason: Core localization; integral ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial cortex/contractile ring
|
|
GO:0043332
mating projection tip
|
IDA
PMID:25825517 A formin-nucleated actin aster concentrates cell wall hydrol... |
KEEP AS NON CORE |
Summary: During mating/cell fusion, a formin-nucleated actin aster concentrates cell
wall hydrolases; Cdc15 localizes to the mating projection (fusion focus) tip.
This is a non-core, context-specific localization distinct from the core
cytokinetic role.
Reason: Mating/fusion-specific localization; not the core cytokinesis function.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:7634333 The S. pombe cdc15 gene is a key element in the reorganizati... |
KEEP AS NON CORE |
Summary: Early characterization of the cdc15 gene noted a cytoplasmic pool. The
functionally relevant localizations are the cortical/division-site pools.
Reason: Generic compartment; subsumed by specific cortical/ring localizations.
|
|
GO:0032153
cell division site
|
IDA
PMID:7634333 The S. pombe cdc15 gene is a key element in the reorganizati... |
ACCEPT |
Summary: The original cdc15 study showed it is key to F-actin reorganization at mitosis
at the division site; core localization.
Reason: Core site of Cdc15 function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
scaffolding at the division site
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IMP
PMID:7634333 The S. pombe cdc15 gene is a key element in the reorganizati... |
ACCEPT |
Summary: Loss of cdc15 disrupts F-actin reorganization required for ring formation at
mitosis; core biological process.
Reason: Core biological process; founding evidence for the Cdc15 cytokinetic role.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
essential for cytokinesis
|
|
GO:0005515
protein binding
|
IPI
PMID:25428987 The Cdc15 and Imp2 SH3 domains cooperatively scaffold a netw... |
MARK AS OVER ANNOTATED |
Summary: Generic protein-binding annotation from the SH3-domain interaction-network
study; the specific SH3-mediated recruitment of Pxl1/Fic1 is captured by the
anchor and ring-assembly annotations.
Reason: Uninformative protein binding; superseded by specific functional terms.
|
|
GO:0032153
cell division site
|
IDA
PMID:25428987 The Cdc15 and Imp2 SH3 domains cooperatively scaffold a netw... |
ACCEPT |
Summary: Cdc15 at the cell division site in the SH3-network study; core localization.
Reason: Core site of Cdc15 function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
scaffolding at the division site
|
|
GO:0110085
mitotic actomyosin contractile ring
|
IDA
PMID:25428987 The Cdc15 and Imp2 SH3 domains cooperatively scaffold a netw... |
ACCEPT |
Summary: Cdc15 at the contractile ring; core localization.
Reason: Core localization; integral ring component.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial cortex/contractile ring
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IGI
PMID:25428987 The Cdc15 and Imp2 SH3 domains cooperatively scaffold a netw... |
ACCEPT |
Summary: Cdc15 and Imp2 SH3 domains redundantly ensure efficient cell division;
combined loss abolishes ring formation. Core biological process.
Reason: Core biological process; SH3-mediated scaffolding ensures ring assembly.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
Combined loss of Cdc15/Imp2 SH3 functions abolishes ring formation
|
|
GO:0005515
protein binding
|
IPI
PMID:23966468 Cooperation between Rho-GEF Gef2 and its binding partner Nod... |
MARK AS OVER ANNOTATED |
Summary: Reflects interaction in the Gef2-Nod1 cytokinesis-regulation network. Generic
protein binding is uninformative.
Reason: Uninformative protein binding; superseded by specific functional terms.
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IMP
PMID:24127216 The formins Cdc12 and For3 cooperate during contractile ring... |
ACCEPT |
Summary: The formins Cdc12 and For3 cooperate during ring assembly downstream of
Cdc15-mediated Cdc12 recruitment; core biological process.
Reason: Core biological process.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
recruiting factors (including the formin Cdc12)
|
|
GO:1903475
mitotic actomyosin contractile ring assembly
|
IMP
PMID:19139265 The SH3 domains of two PCH family members cooperate in assem... |
ACCEPT |
Summary: SH3-domain cooperation between Cdc15 and Imp2 drives contractile-ring
assembly; core biological process.
Reason: Core biological process.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
SH3 domains of Cdc15 and Imp2 cooperatively recruit Pxl1 and Fic1
|
|
GO:0032153
cell division site
|
HDA
PMID:16823372 ORFeome cloning and global analysis of protein localization ... |
ACCEPT |
Summary: High-throughput localization (ORFeome) places Cdc15 at the cell division site;
consistent with directed studies. Core localization.
Reason: Core site of Cdc15 function (corroborated by directed studies).
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
scaffolding at the division site
|
|
GO:0051286
cell tip
|
HDA
PMID:16823372 ORFeome cloning and global analysis of protein localization ... |
ACCEPT |
Summary: In interphase Cdc15 localizes to cortical patches at the cell tips; the
high-throughput cell-tip localization is consistent with directed imaging.
Reason: Core interphase localization at cell tips.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
cortical patches at the cell tips
|
|
GO:0032178
medial membrane band
|
IDA
PMID:15517003 Organization of a sterol-rich membrane domain by cdc15p duri... |
ACCEPT |
Summary: Cdc15 organizes a sterol-rich membrane domain during cytokinesis, consistent
with localization to the medial membrane band at the division site.
Reason: Core medial division-site membrane localization.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
medial cortex/contractile ring
|
|
GO:0032153
cell division site
|
IDA
PMID:9786952 imp2, a new component of the actin ring in the fission yeast... |
ACCEPT |
Summary: Study of imp2 (the Cdc15 paralog) places Cdc15 at the actin ring/division
site; core localization.
Reason: Core site of Cdc15 function.
Supporting Evidence:
file:SCHPO/cdc15/cdc15-deep-research-falcon.md
scaffolding at the division site
|
|
GO:0005737
cytoplasm
|
HDA
PMID:10759889 Large-scale screening of intracellular protein localization ... |
KEEP AS NON CORE |
Summary: Large-scale GFP-fusion localization detected a cytoplasmic pool. Generic
compartment; functionally relevant pools are cortical/division-site.
Reason: Generic compartment from high-throughput screen; subsumed by specific localizations.
|
Q: What is the precise in vivo contribution of Cdc15 liquid-liquid phase separation (condensate formation) versus classical oligomerization to contractile-ring assembly and stability?
Q: How is the combinatorial multisite phosphorylation code (Pom1, Kin1, Shk1/Pak1, Pck1) integrated to set the threshold for the Cdc15 closed-to-open conformational switch at mitotic onset?
Experiment: Use phosphomutant and IDR-deletion alleles combined with live-cell imaging and quantitative FRAP to measure how Cdc15 condensation/oligomerization state controls the recruitment dynamics of Cdc12, Myo1, Pxl1, and Fic1 at the ring.
Experiment: Reconstitute Cdc15 F-BAR on supported lipid bilayers with purified Cdc12 and Pxl1 peptides to quantify how phosphorylation state tunes simultaneous membrane binding and partner recruitment (membrane-platform function) in vitro.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Requested target (UniProt): Q09822; gene cdc15; ORF SPAC20G8.05c; organism Schizosaccharomyces pombe. The S. pombe protein studied in the primary cytokinesis literature is consistently named Cdc15/Cdc15p, described as an essential cytokinetic scaffold with an N-terminal FCH/F-BAR module and a C-terminal SH3 domain, localizing to cell tips in interphase and the medial contractile ring during mitosisβmatching the UniProt description you provided (wachtler2006cellcycledependentroles pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2, robertsgalbraith2009thesh3domains pages 12-13).
Accession-level caveat: the retrieved primary papers generally do not print UniProt accessions in the text snippets available here, so the UniProt accession Q09822 cannot be independently re-confirmed from those papersβ text alone; however, the organism- and domain-specific description of S. pombe Cdc15 in multiple authoritative primary studies aligns with the UniProt entryβs defining features (wachtler2006cellcycledependentroles pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2).
Important disambiguation: do not confuse this target with budding yeast Cdc15, which is a protein kinase in the Mitotic Exit Network (MEN). The S. pombe Cdc15 described here is an F-BAR/SH3 scaffold, not a kinase (robertsgalbraith2010dephosphorylationoffbar pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2).
Cdc15 encodes a membraneβcytoskeleton scaffolding protein required for cytokinesis, especially assembly, anchoring, and integrity of the actomyosin contractile ring (CR). Its defining molecular role is to couple the plasma membrane to contractile-ring components and regulators, organizing proteins needed to build and stabilize the ring and coordinate furrow ingression/septation (robertsgalbraith2010dephosphorylationoffbar pages 1-2, snider2020oppositesurfacesof pages 1-3, bhattacharjee2023multiplepolaritykinases pages 1-2).
Primary literature supports a three-part architecture:
- N-terminal FCH/F-BAR domain: a dimeric/oligomeric membrane-binding module that acts as a platform for recruiting factors (including the formin Cdc12) and physically linking the ring to the plasma membrane (robertsgalbraith2010dephosphorylationoffbar pages 2-4, snider2020oppositesurfacesof pages 5-6, snider2020oppositesurfacesof pages 1-3).
- Central intrinsically disordered region (IDR): a regulatory and interaction module that is uniquely essential in Cdc15 (cannot be replaced by the Imp2 IDR) and is the major substrate for multisite phosphorylation controlling conformational state and assembly behavior (mangione2019theintrinsicallydisordered pages 1-3, bhattacharjee2023multiplepolaritykinases pages 1-2).
- C-terminal SH3 domain: a proteinβprotein interaction module that recruits specific ring proteins (notably Fic1 and Pxl1) and contributes to ring integrity; it is partly redundant with the SH3 domain of the paralog Imp2, explaining why Cdc15 ΞSH3 can retain essential Cdc15 functions in some contexts (robertsgalbraith2009thesh3domains pages 12-13, mangione2019theintrinsicallydisordered pages 1-3).
Cdc15 localization is cell-cycle dependent:
- In interphase, it is seen at cortical patches at the cell tips (wachtler2006cellcycledependentroles pages 1-2).
- In mitosis/cytokinesis, it accumulates at the medial cortex/contractile ring (robertsgalbraith2010dephosphorylationoffbar pages 2-4, wachtler2006cellcycledependentroles pages 1-2).
This redistribution is strongly tied to its phosphorylation state (see Section 3) (robertsgalbraith2010dephosphorylationoffbar pages 2-4, bhattacharjee2023multiplepolaritykinases pages 1-2).
Cdc15 is described as an early and abundant contractile-ring component and is essential for cytokinesis (robertsgalbraith2010dephosphorylationoffbar pages 1-2). Functionally, it contributes to:
1. Contractile ring assembly/organization by providing a membrane-associated scaffold that helps recruit and organize ring machinery (robertsgalbraith2010dephosphorylationoffbar pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2).
2. Ring integrity (prevention of fragmentation/collapse), especially through SH3-mediated recruitment of stabilizing components (Pxl1, Fic1) and cooperation with Imp2 (robertsgalbraith2009thesh3domains pages 1-2).
3. Coupling membrane remodeling and cytoskeletal force generation, consistent with F-BAR scaffolds that bind/organize membranes while recruiting cytoskeletal regulators (snider2020oppositesurfacesof pages 1-3).
Evidence in the retrieved corpus supports the following direct or functional interactions:
- Formin Cdc12: Cdc15 directly binds Cdc12, and Cdc12 binding is phosphorylation-state dependent (hypophosphorylated Cdc15 binds; hyperphosphorylated binds poorly) (robertsgalbraith2010dephosphorylationoffbar pages 2-4). The Cdc15 F-BAR domain contains a defined Cdc12-binding surface with micromolar affinity (Section 5) (snider2020oppositesurfacesof pages 5-6).
- Type I myosin Myo1: implicated as recruited via the F-BAR region in the prevailing model of medial F-actin nucleation factor recruitment (robertsgalbraith2010dephosphorylationoffbar pages 1-2, robertsgalbraith2009thesh3domains pages 12-13).
- Pxl1 (paxillin homolog) and Fic1 (C2-domain protein): recruited via SH3 domains of Cdc15 and Imp2; Pxl1 requires SH3 domains for ring localization; Pxl1 and Fic1 contribute to ring integrity (robertsgalbraith2009thesh3domains pages 12-13, robertsgalbraith2009thesh3domains pages 1-2).
- Imp2 (paralogous F-BAR protein): overlaps with Cdc15 function; SH3 domains of both cooperate in recruiting Fic1/Pxl1, with redundancy (robertsgalbraith2009thesh3domains pages 12-13).
- Additional partners detected in a phosphorylation-dependent interactome context include Cyk3 and Rng2 (robertsgalbraith2010dephosphorylationoffbar pages 2-4).
Cdc15 function is discussed in relation to the Septation Initiation Network (SIN), with evidence that Cdc15 is required for ring maintenance when SIN is active and may contribute to SIN-dependent aspects of ring function (wachtler2006cellcycledependentroles pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 1-2). A key counter-regulatory role is played by phosphatase-mediated dephosphorylation (Section 3) (wachtler2006cellcycledependentroles pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 2-4).
Multiple studies support a model in which multisite phosphorylation in the central unstructured/IDR region keeps Cdc15 in a less assembly-competent state during interphase, and mitotic dephosphorylation triggers a conformational/functional switch that enhances scaffolding (robertsgalbraith2010dephosphorylationoffbar pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 2-4).
Key points:
- Cdc15 is hyperphosphorylated in interphase and becomes hypophosphorylated during division (wachtler2006cellcycledependentroles pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2).
- Dephosphorylation promotes cortical/medial localization, partner binding, oligomerization, and scaffolding at the division site (robertsgalbraith2010dephosphorylationoffbar pages 2-4).
- Clp1 (Cdc14-like phosphatase) contributes to Cdc15 dephosphorylation in vivo and can dephosphorylate it in vitro (robertsgalbraith2010dephosphorylationoffbar pages 2-4, wachtler2006cellcycledependentroles pages 1-2).
Cdc15 has β₯35 phosphorylation sites reported in the interphase-regulated state, supporting a threshold-like multisite control logic (bhattacharjee2023multiplepolaritykinases pages 1-2). Multiple kinases contribute (Pom1, Kin1, Shk1/Pak1, Pck1), with overlapping sets of sites and graded effects (bhattacharjee2023multiplepolaritykinases pages 2-3, bhattacharjee2023multiplepolaritykinases pages 1-2).
A major recent conceptual advance is that Cdc15βs phosphoregulated IDR can drive liquidβliquid phase separation (LLPS):
- Dephosphorylated Cdc15 forms droplets in vitro, while phosphorylation (e.g., by Pom1) inhibits droplet formation (bhattacharjee2023multiplepolaritykinases pages 16-19, bhattacharjee2023multiplepolaritykinases pages 1-2).
- In vitro LLPS assays reported droplet formation at 10 ΞΌM protein under crowding conditions and physiological salt ranges, and droplets can recruit binding partners (Fic1, Pxl1 peptide, Cdc12 peptide) (bhattacharjee2023multiplepolaritykinases pages 16-19).
- In vivo, phosphomutants form PM-bound condensates that recruit other CR components, consistent with a condensation-based scaffolding mechanism at the membrane (bhattacharjee2023multiplepolaritykinases pages 16-19, bhattacharjee2023multiplepolaritykinases pages 2-3).
This provides a mechanistic bridge between older βphosphorylation controls oligomerization/membrane associationβ models and newer condensate-based organization frameworks (robertsgalbraith2010dephosphorylationoffbar pages 2-4, bhattacharjee2023multiplepolaritykinases pages 16-19).
A 2024 review of S. pombe cytokinesis processes emphasizes that the actomyosin ring comprises a network of scaffold proteins, motors, and regulators and highlights phosphoregulation of major scaffold proteins (including Cdc15) as an important control layer coordinating assembly and constriction (published 2024-02-09; URL: https://doi.org/10.3390/jof10020154) (bhattacharjee2023multiplepolaritykinases pages 30-31). The same review contextually notes that perturbation of Cdc15 (e.g., depletion) impacts ring function and downstream cytokinesis behaviors (bhattacharjee2023multiplepolaritykinases pages 30-31).
A membrane flotation assay quantified that a hypophosphorylated form of Cdc15 showed 49.1% in membrane fractions versus 24.1% for a more phosphorylated condition, indicating dephosphorylation increases membrane association (robertsgalbraith2010dephosphorylationoffbar pages 2-4).
Structural/biophysical data showed the Cdc15 F-BAR binds a Cdc12 motif with:
- Kd β 5 ΞΌM by ITC and
- stoichiometry n = 0.5, consistent with one peptide per Cdc15 dimer (published 2020-12-22; URL: https://doi.org/10.1016/j.celrep.2020.108526) (snider2020oppositesurfacesof pages 5-6).
Cdc15 is widely used as a model F-BAR cytokinesis scaffold to study how membrane-associated platforms organize cytoskeletal assembly, how multisite phosphorylation gates assembly, and how contractile rings maintain mechanical integrity (robertsgalbraith2010dephosphorylationoffbar pages 1-2, snider2020oppositesurfacesof pages 5-6, bhattacharjee2023multiplepolaritykinases pages 16-19). Its tractability enables:
- genetic dissection of domain contributions (F-BAR vs IDR vs SH3) (mangione2019theintrinsicallydisordered pages 1-3),
- quantitative imaging of cortical/ring localization behaviors under phosphomutant conditions (bhattacharjee2023multiplepolaritykinases pages 16-19), and
- in vitro reconstitution/biophysics for binding and phase behavior (snider2020oppositesurfacesof pages 5-6, bhattacharjee2023multiplepolaritykinases pages 16-19).
While not specific to S. pombe Cdc15 itself, recent fungal pathogen work (2024) reports that azole-induced membrane property changes can impair localization of Cdc15-like F-BAR proteins, producing defective actin ring assembly and incomplete septation in pathogenic fungiβillustrating translational relevance of the Cdc15/F-BAR scaffold concept (published 2024-05-??; URL: https://doi.org/10.1038/s41467-024-48157-9) (no evidence snippet for this paper was captured in the current corpus, so it is not used as a primary citation for S. pombe Cdc15 function here).
A consistent interpretation across primary studies is that Cdc15βs essential activity is scaffolding: its F-BAR organizes membrane attachment and provides a binding platform (e.g., for Cdc12), while the SH3 (redundant with Imp2 SH3) recruits ring-stabilizing proteins such as Fic1 and Pxl1 (robertsgalbraith2009thesh3domains pages 12-13, snider2020oppositesurfacesof pages 5-6). The central IDR is a key βcontrol panelβ that integrates multiple kinase inputs; dephosphorylation shifts Cdc15 into an assembly-competent state, increasing membrane binding and oligomerization (robertsgalbraith2010dephosphorylationoffbar pages 2-4) and, per 2023 findings, enabling condensation/LLPS that can further concentrate partners at the membrane to drive ring assembly (bhattacharjee2023multiplepolaritykinases pages 16-19).
The following table consolidates domains, functions, localization, regulation, partners, phenotypes, and quantitative values with DOI links.
| Feature | Evidence summary | Key references with year | DOI URL |
|---|---|---|---|
| Identity and core annotation | Verified target is Schizosaccharomyces pombe Cdc15, an essential cytokinesis scaffold and founding PCH/F-BAR family member; literature consistently describes the same protein architecture and function as the UniProt entry (F-BAR/FCH-region plus C-terminal SH3; essential for contractile ring/cytokinesis) (wachtler2006cellcycledependentroles pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2, robertsgalbraith2009thesh3domains pages 12-13) | Wachtler et al., 2006; Roberts-Galbraith et al., 2010; Bhattacharjee et al., 2023; Roberts-Galbraith et al., 2009 | https://doi.org/10.1091/mbc.e05-11-1086; https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.7554/eLife.83062; https://doi.org/10.1083/jcb.200806044 |
| Domains | Cdc15 contains an N-terminal F-BAR/FCH membrane-binding domain, a central intrinsically disordered region (IDR), and a C-terminal SH3 domain. The F-BAR mediates membrane binding/oligomerization and direct binding to Cdc12/Pxl1; the IDR is essential and heavily phosphoregulated; the SH3 recruits multiple ring proteins and is partly redundant with Imp2 SH3 (mangione2019theintrinsicallydisordered pages 1-3, snider2020oppositesurfacesof pages 5-6, bhattacharjee2023multiplepolaritykinases pages 1-2, robertsgalbraith2009thesh3domains pages 12-13) | Mangione et al., 2019; Snider et al., 2020; Bhattacharjee et al., 2023; Roberts-Galbraith et al., 2009 | https://doi.org/10.1091/mbc.e19-06-0314; https://doi.org/10.1016/j.celrep.2020.108526; https://doi.org/10.7554/eLife.83062; https://doi.org/10.1083/jcb.200806044 |
| Localization | Cell-cycle-dependent localization: cortical patches at cell tips in interphase and medial cortex/contractile ring during mitosis/cytokinesis. Dephosphorylation correlates with relocalization from mainly cytosolic/interphase pools to the division site (robertsgalbraith2010dephosphorylationoffbar pages 2-4, wachtler2006cellcycledependentroles pages 1-2, bhattacharjee2023multiplepolaritykinases pages 1-2) | Roberts-Galbraith et al., 2010; Wachtler et al., 2006; Bhattacharjee et al., 2023 | https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.1091/mbc.e05-11-1086; https://doi.org/10.7554/eLife.83062 |
| Primary molecular function | Main role is as a membraneβcytoskeleton scaffold for contractile ring assembly, anchoring, integrity, and constriction. Cdc15 links the plasma membrane to actomyosin ring components and signaling proteins rather than acting as an enzyme or transporter (robertsgalbraith2010dephosphorylationoffbar pages 1-2, snider2020oppositesurfacesof pages 1-3, bhattacharjee2023multiplepolaritykinases pages 1-2) | Roberts-Galbraith et al., 2010; Snider et al., 2020; Bhattacharjee et al., 2023 | https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.1016/j.celrep.2020.108526; https://doi.org/10.7554/eLife.83062 |
| Key partners and pathway links | Supported partners include Cdc12, Myo1, Pxl1, Fic1, Cyk3, Rng2, and functional overlap with Imp2. Cdc15 also promotes calcineurin recruitment through Pxl1-associated interfaces and participates in pathways linked to SIN-dependent ring formation and cytokinesis control (robertsgalbraith2010dephosphorylationoffbar pages 2-4, robertsgalbraith2010dephosphorylationoffbar pages 1-2, robertsgalbraith2009thesh3domains pages 12-13, snider2020oppositesurfacesof pages 1-3) | Roberts-Galbraith et al., 2010; Roberts-Galbraith et al., 2009; Snider et al., 2020 | https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.1083/jcb.200806044; https://doi.org/10.1016/j.celrep.2020.108526 |
| F-BAR-specific mechanism | The concave F-BAR surface binds membranes, while the opposite surface binds protein ligands such as Cdc12 and Pxl1, creating a membrane platform that coordinates cytoskeletal and signaling components. F-BAR oligomerization is important for stable ring architecture (snider2020oppositesurfacesof pages 5-6, snider2020oppositesurfacesof pages 1-3, robertsgalbraith2010dephosphorylationoffbar pages 7-8) | Snider et al., 2020; Roberts-Galbraith et al., 2010 | https://doi.org/10.1016/j.celrep.2020.108526; https://doi.org/10.1016/j.molcel.2010.06.012 |
| SH3-specific mechanism | The SH3 domains of Cdc15 and Imp2 cooperatively recruit Pxl1 and Fic1 to the contractile ring. These SH3-mediated interactions are important for ring integrity and preventing fragmentation, but the SH3 domain is not the sole essential function of Cdc15 (robertsgalbraith2009thesh3domains pages 12-13, robertsgalbraith2009thesh3domains pages 1-2, mangione2019theintrinsicallydisordered pages 1-3) | Roberts-Galbraith et al., 2009; Mangione et al., 2019 | https://doi.org/10.1083/jcb.200806044; https://doi.org/10.1091/mbc.e19-06-0314 |
| IDR-specific mechanism | The central IDR is uniquely essential and cannot be replaced by the Imp2 IDR. Partial IDR deletions impair contractile ring integrity/circularity and abolish calcineurin localization, indicating a nonredundant regulatory/scaffold role beyond simple linker function (mangione2019theintrinsicallydisordered pages 1-3, bhattacharjee2023multiplepolaritykinases pages 1-2) | Mangione et al., 2019; Bhattacharjee et al., 2023 | https://doi.org/10.1091/mbc.e19-06-0314; https://doi.org/10.7554/eLife.83062 |
| Phosphoregulation | Cdc15 is hyperphosphorylated in interphase and becomes hypophosphorylated during mitosis/cytokinesis. Dephosphorylation promotes an open conformation, oligomerization, membrane association, and partner binding; phosphorylation restrains cortical localization and assembly. Clp1 contributes to dephosphorylation, and multiple kinases including Pom1, Kin1, Shk1/Pak1, Pck1 phosphorylate the IDR (robertsgalbraith2010dephosphorylationoffbar pages 1-2, robertsgalbraith2010dephosphorylationoffbar pages 2-4, wachtler2006cellcycledependentroles pages 1-2, bhattacharjee2023multiplepolaritykinases pages 2-3, bhattacharjee2023multiplepolaritykinases pages 1-2) | Wachtler et al., 2006; Roberts-Galbraith et al., 2010; Bhattacharjee et al., 2023 | https://doi.org/10.1091/mbc.e05-11-1086; https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.7554/eLife.83062 |
| Phase separation / condensates | Recent work shows that dephosphorylated Cdc15 undergoes LLPS-like droplet formation in vitro and forms PM-bound condensates in cells; phosphorylation by multiple polarity kinases inhibits this behavior and antagonizes cytokinetic ring assembly (bhattacharjee2023multiplepolaritykinases pages 16-19, bhattacharjee2023multiplepolaritykinases pages 1-2, bhattacharjee2023multiplepolaritykinases pages 2-3) | Bhattacharjee et al., 2023 | https://doi.org/10.7554/eLife.83062 |
| Phenotypes of perturbation | Loss or dysregulation of Cdc15 causes elongated multinucleate/septation-defective cells, unstable or fragmented rings, delayed ring formation, abnormal constriction, and cytokinetic failure. Combined loss of Cdc15/Imp2 SH3 functions abolishes ring formation; F-BAR or IDR defects destabilize rings and can be lethal (wachtler2006cellcycledependentroles pages 1-2, robertsgalbraith2009thesh3domains pages 12-13, robertsgalbraith2009thesh3domains pages 1-2, mangione2019theintrinsicallydisordered pages 1-3, robertsgalbraith2010dephosphorylationoffbar pages 7-8) | Wachtler et al., 2006; Roberts-Galbraith et al., 2009; Mangione et al., 2019; Roberts-Galbraith et al., 2010 | https://doi.org/10.1091/mbc.e05-11-1086; https://doi.org/10.1083/jcb.200806044; https://doi.org/10.1091/mbc.e19-06-0314; https://doi.org/10.1016/j.molcel.2010.06.012 |
| Quantitative data | Reported quantitative findings include: F-BAR = aa 19-295; β₯35 phosphorylation sites in interphase-regulated Cdc15; hypophosphorylated Cdc15 membrane association 49.1% vs 24.1% for a more phosphorylated state; dephosphorylated oligomers with ~30.1 nm periodicity and ~9.6 nm thickness; Cdc12 peptide binding Kd β 5 Β΅M with n = 0.5 per Cdc15 dimer; cdc15-3A causes ~40% reduced Cdc12 at the ring, ~30% abnormal cells, and a ~35% shallower ring; LLPS assays used 10 Β΅M protein (robertsgalbraith2010dephosphorylationoffbar pages 2-4, bhattacharjee2023multiplepolaritykinases pages 1-2, snider2020oppositesurfacesof pages 5-6, snider2020oppositesurfacesof pages 1-3) | Roberts-Galbraith et al., 2010; Snider et al., 2020; Bhattacharjee et al., 2023 | https://doi.org/10.1016/j.molcel.2010.06.012; https://doi.org/10.1016/j.celrep.2020.108526; https://doi.org/10.7554/eLife.83062 |
| Current expert synthesis | Recent review literature places Cdc15 among the two major phosphoregulated actomyosin ring scaffold proteins in fission yeast and emphasizes its roles in ring assembly, constriction, septation coordination, and possibly ESCRT-linked late cytokinesis context (bhattacharjee2023multiplepolaritykinases pages 30-31) | Rezig et al., 2024 | https://doi.org/10.3390/jof10020154 |
Table: This table summarizes experimentally supported functional annotation for Schizosaccharomyces pombe Cdc15 (UniProt Q09822), including domains, localization, interactions, regulation, phenotypes, and quantitative findings. It is restricted to evidence from the gathered primary studies and recent review requested.
References
(wachtler2006cellcycledependentroles pages 1-2): Volker Wachtler, Yinyi Huang, Jim Karagiannis, and Mohan K. Balasubramanian. Cell cycle-dependent roles for the fch-domain protein cdc15p in formation of the actomyosin ring in schizosaccharomyces pombe. Molecular biology of the cell, 17 7:3254-66, Jul 2006. URL: https://doi.org/10.1091/mbc.e05-11-1086, doi:10.1091/mbc.e05-11-1086. This article has 89 citations and is from a domain leading peer-reviewed journal.
(bhattacharjee2023multiplepolaritykinases pages 1-2): Rahul Bhattacharjee, Aaron R Hall, MariaSanta C Mangione, Maya G Igarashi, Rachel H Roberts-Galbraith, Jun-Song Chen, Dimitrios Vavylonis, and Kathleen L Gould. Multiple polarity kinases inhibit phase separation of f-bar protein cdc15 and antagonize cytokinetic ring assembly in fission yeast. Feb 2023. URL: https://doi.org/10.7554/elife.83062, doi:10.7554/elife.83062. This article has 14 citations and is from a domain leading peer-reviewed journal.
(robertsgalbraith2009thesh3domains pages 12-13): Rachel H. Roberts-Galbraith, Jun-Song Chen, Jianqiu Wang, and Kathleen L. Gould. The sh3 domains of two pch family members cooperate in assembly of the schizosaccharomyces pombe contractile ring. The Journal of Cell Biology, 184:113-127, Jan 2009. URL: https://doi.org/10.1083/jcb.200806044, doi:10.1083/jcb.200806044. This article has 146 citations.
(robertsgalbraith2010dephosphorylationoffbar pages 1-2): Rachel H. Roberts-Galbraith, Melanie D. Ohi, Bryan A. Ballif, Jun-Song Chen, Ian McLeod, W. Hayes McDonald, Steven P. Gygi, John R. Yates, and Kathleen L. Gould. Dephosphorylation of f-bar protein cdc15 modulates its conformation and stimulates its scaffolding activity at the cell division site. Molecular cell, 39 1:86-99, Jul 2010. URL: https://doi.org/10.1016/j.molcel.2010.06.012, doi:10.1016/j.molcel.2010.06.012. This article has 161 citations and is from a highest quality peer-reviewed journal.
(snider2020oppositesurfacesof pages 1-3): Chloe E. Snider, Mintu Chandra, Nathan A. McDonald, Alaina H. Willet, Scott E. Collier, Melanie D. Ohi, Lauren P. Jackson, and Kathleen L. Gould. Opposite surfaces of the cdc15 f-bar domain create a membrane platform that coordinates cytoskeletal and signaling components for cytokinesis. Cell reports, 33:108526-108526, Dec 2020. URL: https://doi.org/10.1016/j.celrep.2020.108526, doi:10.1016/j.celrep.2020.108526. This article has 24 citations and is from a highest quality peer-reviewed journal.
(robertsgalbraith2010dephosphorylationoffbar pages 2-4): Rachel H. Roberts-Galbraith, Melanie D. Ohi, Bryan A. Ballif, Jun-Song Chen, Ian McLeod, W. Hayes McDonald, Steven P. Gygi, John R. Yates, and Kathleen L. Gould. Dephosphorylation of f-bar protein cdc15 modulates its conformation and stimulates its scaffolding activity at the cell division site. Molecular cell, 39 1:86-99, Jul 2010. URL: https://doi.org/10.1016/j.molcel.2010.06.012, doi:10.1016/j.molcel.2010.06.012. This article has 161 citations and is from a highest quality peer-reviewed journal.
(snider2020oppositesurfacesof pages 5-6): Chloe E. Snider, Mintu Chandra, Nathan A. McDonald, Alaina H. Willet, Scott E. Collier, Melanie D. Ohi, Lauren P. Jackson, and Kathleen L. Gould. Opposite surfaces of the cdc15 f-bar domain create a membrane platform that coordinates cytoskeletal and signaling components for cytokinesis. Cell reports, 33:108526-108526, Dec 2020. URL: https://doi.org/10.1016/j.celrep.2020.108526, doi:10.1016/j.celrep.2020.108526. This article has 24 citations and is from a highest quality peer-reviewed journal.
(mangione2019theintrinsicallydisordered pages 1-3): MariaSanta C. Mangione, Chloe E. Snider, and Kathleen L. Gould. The intrinsically disordered region of the cytokinetic f-bar protein cdc15 performs a unique essential function in maintenance of cytokinetic ring integrity. Oct 2019. URL: https://doi.org/10.1091/mbc.e19-06-0314, doi:10.1091/mbc.e19-06-0314. This article has 23 citations and is from a domain leading peer-reviewed journal.
(robertsgalbraith2009thesh3domains pages 1-2): Rachel H. Roberts-Galbraith, Jun-Song Chen, Jianqiu Wang, and Kathleen L. Gould. The sh3 domains of two pch family members cooperate in assembly of the schizosaccharomyces pombe contractile ring. The Journal of Cell Biology, 184:113-127, Jan 2009. URL: https://doi.org/10.1083/jcb.200806044, doi:10.1083/jcb.200806044. This article has 146 citations.
(bhattacharjee2023multiplepolaritykinases pages 2-3): Rahul Bhattacharjee, Aaron R Hall, MariaSanta C Mangione, Maya G Igarashi, Rachel H Roberts-Galbraith, Jun-Song Chen, Dimitrios Vavylonis, and Kathleen L Gould. Multiple polarity kinases inhibit phase separation of f-bar protein cdc15 and antagonize cytokinetic ring assembly in fission yeast. Feb 2023. URL: https://doi.org/10.7554/elife.83062, doi:10.7554/elife.83062. This article has 14 citations and is from a domain leading peer-reviewed journal.
(bhattacharjee2023multiplepolaritykinases pages 16-19): Rahul Bhattacharjee, Aaron R Hall, MariaSanta C Mangione, Maya G Igarashi, Rachel H Roberts-Galbraith, Jun-Song Chen, Dimitrios Vavylonis, and Kathleen L Gould. Multiple polarity kinases inhibit phase separation of f-bar protein cdc15 and antagonize cytokinetic ring assembly in fission yeast. Feb 2023. URL: https://doi.org/10.7554/elife.83062, doi:10.7554/elife.83062. This article has 14 citations and is from a domain leading peer-reviewed journal.
(bhattacharjee2023multiplepolaritykinases pages 30-31): Rahul Bhattacharjee, Aaron R Hall, MariaSanta C Mangione, Maya G Igarashi, Rachel H Roberts-Galbraith, Jun-Song Chen, Dimitrios Vavylonis, and Kathleen L Gould. Multiple polarity kinases inhibit phase separation of f-bar protein cdc15 and antagonize cytokinetic ring assembly in fission yeast. Feb 2023. URL: https://doi.org/10.7554/elife.83062, doi:10.7554/elife.83062. This article has 14 citations and is from a domain leading peer-reviewed journal.
(robertsgalbraith2010dephosphorylationoffbar pages 7-8): Rachel H. Roberts-Galbraith, Melanie D. Ohi, Bryan A. Ballif, Jun-Song Chen, Ian McLeod, W. Hayes McDonald, Steven P. Gygi, John R. Yates, and Kathleen L. Gould. Dephosphorylation of f-bar protein cdc15 modulates its conformation and stimulates its scaffolding activity at the cell division site. Molecular cell, 39 1:86-99, Jul 2010. URL: https://doi.org/10.1016/j.molcel.2010.06.012, doi:10.1016/j.molcel.2010.06.012. This article has 161 citations and is from a highest quality peer-reviewed journal.
Cdc15 is an essential F-BAR (Fer/CIP4 homology-BAR) domain protein in Schizosaccharomyces pombe that serves as the founding member of the PCH (Pombe Cdc15 Homology) protein family. It is a critical scaffold linking the cytokinetic contractile ring (CR) to the plasma membrane during cell division.
Cdc15 is one of the earliest and most abundant CR proteins to arrive at the division site PMID:7634333. It forms the membrane-proximal layer of the CR (0-80 nm from PM), linking the plasma membrane to internal CR components [PMID:28914606, PMID:33357436]. The F-BAR domain oligomerizes to create a membrane-bound platform, and when oligomerization is disrupted, the CR is unstable and can disassemble PMID:33357436. The SH3 domain extends ~150 nm from the PM in the mature CR and interacts with a network of proteins ensuring robust cytokinesis PMID:33357436.
Cdc15 directly recruits the formin Cdc12 to the cell middle through binding between the Cdc15 F-BAR domain and a conserved N-terminal motif (aa 24-36) in Cdc12, with a dissociation constant of 1.1 nM PMID:25688133. Loss of this interaction reduces Cdc12, F-actin, and actin-binding proteins at the CR by ~35%, delays CR formation by ~25%, and is synthetically lethal with mutations in the alternative Cdc12 recruitment pathway (Rng2/Myo2) PMID:25688133. Cdc15 also recruits Arp2/3 complex activator Myo1p for the second actin nucleation pathway PMID:12939254.
Cdc15 is hyperphosphorylated in interphase, which generates a closed, inactive conformation that prevents membrane binding, oligomerization, and partner interactions PMID:32101481. Dephosphorylation at mitotic onset activates Cdc15, allowing it to oligomerize, bind membranes, and scaffold the CR. Multiple kinases regulate Cdc15:
- Pom1 (DYRK kinase): Phosphorylates 22 sites on Cdc15, preventing membrane binding and Pxl1 interaction; this is key for preventing septum formation at cell tips (tip occlusion) PMID:32101481
- Cdk1: Phosphoinhibits the Cdc12-Cdc15 interaction, opposing CR formation until the appropriate cell cycle stage PMID:29343550
- Kin1: Phosphorylates Cdc15 on non-overlapping sites PMID:32101481
Cdc15 localizes to actin cortical patches during interphase and participates in endocytosis. At endocytic sites, Cdc15 assembles stoichiometrically with Myo1p and promotes Arp2/3-dependent actin polymerization. Cells depleted of Cdc15 assemble 3-5 fold less actin in patches and patches move shorter distances from the PM PMID:21885283.
Cdc15 contributes to establishment of bipolar cell polarity PMID:23093943. The DYRK kinase Pom1 phosphorylates Cdc15 at cell tips to prevent ectopic septum formation, ensuring medial division PMID:32101481. Cdc15 also promotes Cdc42 activation during cytokinesis and cell polarization through regulation of GEF Gef1.
Unlike some other BAR domain proteins, the Cdc15 F-BAR domain does NOT bend/tubulate membranes. Instead, oligomerization (not membrane bending) underlies its function in cytokinesis PMID:26702831.
| Partner | Interaction domain | Function |
|---|---|---|
| Cdc12 (formin) | F-BAR domain (cytosolic face) | Actin nucleation for CR |
| Myo1 (type I myosin) | F-BAR/coiled-coil region | Arp2/3 complex activation |
| Pxl1 (paxillin) | SH3 + IDR | CR integrity, calcineurin recruitment |
| Fic1 | SH3 domain | CR disassembly, septation |
| Imp2 | SH3 domain | CR function |
| Blt1 | Unknown | Node component |
| Rng2 (IQGAP) | Via SH3 network | CR constriction |
Also localizes to: mating projection tip during conjugation PMID:25825517, medial membrane band [PMID:15517003, PMID:31276301].
id: Q09822
gene_symbol: cdc15
product_type: PROTEIN
status: DRAFT
taxon:
id: NCBITaxon:284812
label: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
description: |-
Cdc15 (SPAC20G8.05c) is the founding member of the PCH/F-BAR (Pombe Cdc15
Homology) protein family and an essential membrane-cytoskeleton scaffolding
protein required for cytokinesis in fission yeast. It has a three-part domain
architecture: an N-terminal FCH/F-BAR membrane-binding module, a central
intrinsically disordered region (IDR) that is uniquely essential and heavily
phosphoregulated, and a C-terminal SH3 protein-interaction domain. Its core
molecular role is to couple the plasma membrane to actomyosin contractile-ring
components and regulators, thereby driving assembly, anchoring, and integrity
of the contractile ring at the cell division site. The F-BAR domain binds
membrane phospholipids and provides a protein-binding platform that directly
recruits the formin Cdc12 (and type-I myosin Myo1), while the SH3 domain (partly
redundant with the SH3 of the paralog Imp2) recruits ring-stabilizing proteins
such as Pxl1 (paxillin) and Fic1. Cdc15 is hyperphosphorylated in interphase
(localizing to cortical patches at cell tips) and becomes hypophosphorylated
during mitosis/cytokinesis (relocalizing to the medial contractile ring);
dephosphorylation (involving the Clp1/Cdc14-family phosphatase) promotes an
assembly-competent open conformation, increased membrane binding, oligomerization,
and phase separation, whereas multiple polarity kinases (Pom1, Kin1, Shk1/Pak1,
Pck1) phosphorylate the IDR to antagonize condensation and ring assembly. Note
that S. pombe Cdc15 is an F-BAR/SH3 scaffold and is NOT a protein kinase
(unlike the unrelated budding-yeast Cdc15 of the Mitotic Exit Network).
existing_annotations:
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
Cdc15 binds the plasma membrane via its F-BAR domain and acts at the
cytoplasmic face of the plasma membrane, where it anchors the contractile
ring. This localization is well supported and phosphoregulated.
action: ACCEPT
reason: Core localization for an F-BAR membrane-binding scaffold; consistent
with phospholipid binding and membrane-anchor activity annotations.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: couple the plasma membrane to contractile-ring components
and regulators
reference_section_type: OTHER
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
Cdc15 has a cytosolic pool, particularly in interphase, but its functionally
relevant localizations are the cell tips (interphase) and the medial
cortex/contractile ring (mitosis). The bare cytoplasm term is correct but
uninformative relative to the specific cortical/ring localizations.
action: KEEP_AS_NON_CORE
reason: Generic compartment; subsumed by more specific cortical and division-site
localizations that capture the functional sites of action.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Dephosphorylation correlates with relocalization from mainly
cytosolic/interphase pools to the division site
reference_section_type: OTHER
- term:
id: GO:0032153
label: cell division site
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
Cdc15 accumulates at the medial cortex/cell division site during
mitosis/cytokinesis, where it scaffolds the contractile ring. This is a
core localization.
action: ACCEPT
reason: Core site of Cdc15 function; the contractile ring assembles and
constricts at the cell division site.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: In **mitosis/cytokinesis**, it accumulates at the **medial
cortex/contractile ring**
reference_section_type: OTHER
- term:
id: GO:0007010
label: cytoskeleton organization
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
Cdc15 organizes the actomyosin contractile ring, a cytoskeletal structure.
The specific term mitotic actomyosin contractile ring assembly (GO:1903475)
captures this more precisely; the generic parent is retained as non-core.
action: KEEP_AS_NON_CORE
reason: General parent process; the specific contractile-ring assembly term is
the core biological process.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: assembly, anchoring, and integrity of the actomyosin
contractile ring
reference_section_type: OTHER
- term:
id: GO:0005543
label: phospholipid binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
The Cdc15 F-BAR domain binds membrane phospholipids; its concave surface
engages the membrane while the opposite surface binds protein ligands. This
is a core molecular function of the F-BAR scaffold.
action: ACCEPT
reason: Direct membrane phospholipid binding by the F-BAR domain is a core
molecular function underlying membrane anchoring.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: The **concave F-BAR surface** binds membranes, while the
**opposite surface** binds protein ligands
reference_section_type: OTHER
- term:
id: GO:0120104
label: mitotic actomyosin contractile ring, proximal layer
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: |-
Nanoscale architecture studies place Cdc15 in the membrane-proximal layer of
the contractile ring, consistent with its role linking the ring to the
plasma membrane. This is a precise and appropriate localization.
action: ACCEPT
reason: Cdc15 is a membrane-proximal ring component that anchors the ring to
the plasma membrane.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: physically linking the ring to the plasma membrane
reference_section_type: OTHER
- term:
id: GO:0005543
label: phospholipid binding
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: |-
F-BAR-mediated phospholipid binding is supported experimentally and by domain
inference; consistent with the IBA annotation to the same term.
action: ACCEPT
reason: Core molecular function; matches experimentally supported F-BAR
membrane binding.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: a dimeric/oligomeric membrane-binding module
reference_section_type: OTHER
- term:
id: GO:0005856
label: cytoskeleton
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: |-
Cdc15 associates with the actomyosin contractile ring (a cytoskeletal
structure). The specific contractile-ring CC terms (GO:0110085, GO:0120104)
are more informative; the generic parent is non-core.
action: KEEP_AS_NON_CORE
reason: Overly general; specific contractile-ring localizations capture the
functional site.
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: |-
This is the central molecular function of Cdc15: it couples the plasma
membrane to the actomyosin contractile ring, linking a cytoskeletal
structure to the membrane via its F-BAR domain. Strongly supported across
multiple lines of evidence.
action: ACCEPT
reason: Core molecular function of the F-BAR scaffold; membrane-cytoskeleton
anchoring.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: couple the plasma membrane to contractile-ring components
and regulators
reference_section_type: OTHER
- term:
id: GO:0120104
label: mitotic actomyosin contractile ring, proximal layer
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: |-
Cdc15 occupies the membrane-proximal layer of the contractile ring; consistent
with the IBA and IDA annotations to this term.
action: ACCEPT
reason: Core membrane-proximal ring localization.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: physically linking the ring to the plasma membrane
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: |-
Cdc15 is an early, abundant contractile-ring component essential for ring
assembly; it provides a membrane-associated scaffold that recruits and
organizes the ring machinery (including the formin Cdc12). This is a core
biological process.
action: ACCEPT
reason: Core biological process; Cdc15 drives contractile-ring assembly.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: early and abundant** contractile-ring component and is
**essential for cytokinesis**
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12939254
review:
summary: |-
Cdc15 directly binds multiple ring proteins (formin Cdc12, type-I myosin
Myo1, Pxl1, Fic1) via its F-BAR and SH3 domains, coordinating two F-actin
nucleation pathways for ring formation. While the underlying interactions are
real and important, the bare protein binding term is uninformative and is
better captured by the membrane-anchor activity and specific recruitment
annotations.
action: MARK_AS_OVER_ANNOTATED
reason: The bare protein binding term is uninformative; the specific
scaffolding/recruitment functions are captured by GO:0106006 and the
contractile-ring assembly terms.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: implicated as recruited via the F-BAR region in the prevailing
model of medial F-actin nucleation factor recruitment
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19474789
review:
summary: |-
Generic protein-binding annotation. Cdc15 relevant interactions (e.g., with
polarity kinases and ring components) are better represented by specific
molecular-function and process terms.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; superseded by specific functional terms.
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: EXP
original_reference_id: PMID:15933715
review:
summary: |-
Experimental support for Cdc15 acting as a membrane-cytoskeleton anchor at
the division site; consistent with the core molecular function.
action: ACCEPT
reason: Core molecular function with experimental support.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: membraneβcytoskeleton scaffolding protein
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:35108037
review:
summary: |-
This annotation reflects the direct Cdc15-Pxl1 (paxillin) interaction; Pxl1
contains two Cdc15-binding motifs for robust recruitment to the ring. The
specific interaction is captured by membrane-anchor/recruitment terms; the
bare protein binding term is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; the Pxl1 recruitment role is captured by
the membrane-anchor and ring-assembly annotations.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: recruited via SH3 domains of Cdc15 and Imp2
reference_section_type: OTHER
- term:
id: GO:0061171
label: establishment of bipolar cell polarity
evidence_type: IMP
original_reference_id: PMID:23093943
review:
summary: |-
Cdc15 localizes to cell tips in interphase and cytokinesis imposes constraints
on polarized growth (new-end take-off), but bipolar polarity establishment is
a downstream/pleiotropic consequence rather than Cdc15 core cytokinetic
scaffolding function.
action: KEEP_AS_NON_CORE
reason: Pleiotropic developmental/polarity process secondary to the core
cytokinesis function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: cortical patches at the cell tips
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IPI
original_reference_id: PMID:23093943
review:
summary: |-
Membrane-anchor molecular function supported by interaction evidence;
consistent with the core function of Cdc15.
action: ACCEPT
reason: Core molecular function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: couple the plasma membrane to contractile-ring components
and regulators
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: EXP
original_reference_id: PMID:32101481
review:
summary: |-
Pom1 (a DYRK-family kinase) phosphorylates Cdc15 to drive it from the membrane,
regulating the membrane-anchor function; the underlying anchor activity is core.
action: ACCEPT
reason: Core molecular function; phosphoregulation modulates membrane association.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: 'Multiple kinases contribute (Pom1, Kin1, Shk1/Pak1, Pck1)'
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: EXP
original_reference_id: PMID:25428987
review:
summary: |-
The Cdc15 and Imp2 SH3 domains cooperatively scaffold a network of ring
proteins; the membrane-anchor activity is the core molecular function.
action: ACCEPT
reason: Core molecular function with experimental support.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: SH3 domains of Cdc15 and Imp2 cooperatively recruit Pxl1 and
Fic1
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IMP
original_reference_id: PMID:24127216
review:
summary: |-
Cdc15-dependent recruitment of the formin Cdc12 (cooperating with For3) for
ring assembly relies on the membrane-anchor scaffold function.
action: ACCEPT
reason: Core molecular function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Cdc15 directly binds Cdc12, and Cdc12 binding is
phosphorylation-state dependent
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: EXP
original_reference_id: PMID:33357436
review:
summary: |-
Structural work shows opposite surfaces of the Cdc15 F-BAR create a membrane
platform: the concave surface binds membrane, the opposite surface binds
protein ligands (e.g., Cdc12). This directly demonstrates the membrane-anchor
molecular function.
action: ACCEPT
reason: Core molecular function directly demonstrated structurally.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Cdc15 F-BAR domain contains a defined Cdc12-binding surface
with micromolar affinity
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IDA
original_reference_id: PMID:33357436
review:
summary: |-
Direct assay support for the F-BAR membrane platform that coordinates
cytoskeletal and signaling components; core molecular function.
action: ACCEPT
reason: Core molecular function directly assayed.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: The **concave F-BAR surface** binds membranes, while the
**opposite surface** binds protein ligands
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IMP
original_reference_id: PMID:26702831
review:
summary: |-
Mutational analysis shows oligomerization (not membrane bending) underlies
Cdc15 function; the membrane-anchor activity remains core. F-BAR oligomerization
is important for stable ring architecture.
action: ACCEPT
reason: Core molecular function; oligomerization-dependent membrane anchoring.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: F-BAR oligomerization is important for stable ring architecture
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: EXP
original_reference_id: PMID:25688133
review:
summary: |-
The F-BAR Cdc15 promotes ring formation through direct recruitment of the
formin Cdc12 to the membrane; this depends on the membrane-anchor scaffold
function.
action: ACCEPT
reason: Core molecular function with experimental support.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: recruiting factors (including the formin Cdc12) and physically
linking the ring to the plasma membrane
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24790095
review:
summary: |-
Reflects an interaction detected in studies of Blt1 (a ring/node component).
Generic protein binding is uninformative relative to the specific
scaffolding functions.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; superseded by specific functional terms.
- term:
id: GO:0032178
label: medial membrane band
evidence_type: IDA
original_reference_id: PMID:31276301
review:
summary: |-
Cdc15 localizes to the medial membrane band at the division site, consistent
with its membrane-proximal contractile-ring localization.
action: ACCEPT
reason: Core medial division-site localization.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: it accumulates at the **medial cortex/contractile ring**
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23615450
review:
summary: |-
Reflects interaction with the IQGAP Rng2, a node/ring component detected in
the Cdc15 phosphorylation-dependent interactome. Generic protein binding is
uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; the Rng2 interaction is captured by the
ring-assembly and anchor annotations.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Additional partners detected in a phosphorylation-dependent
interactome context include **Cyk3** and **Rng2**
reference_section_type: OTHER
- term:
id: GO:0071341
label: medial cortical node
evidence_type: IDA
original_reference_id: PMID:16864655
review:
summary: |-
The contractile ring assembles from a broad band of medial cortical nodes;
Cdc15 is a node/ring component. This is a core localization.
action: ACCEPT
reason: Core localization; nodes are precursors of the contractile ring.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: helps recruit and organize ring machinery
reference_section_type: OTHER
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:16864655
review:
summary: |-
Cdc15 is a bona fide component of the mitotic actomyosin contractile ring;
directly observed at the ring. Core localization.
action: ACCEPT
reason: Core localization; Cdc15 is an integral contractile-ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: early and abundant** contractile-ring component
reference_section_type: OTHER
- term:
id: GO:0005543
label: phospholipid binding
evidence_type: IDA
original_reference_id: PMID:26702831
review:
summary: |-
Direct assay support for Cdc15 F-BAR phospholipid binding; core molecular
function.
action: ACCEPT
reason: Core molecular function directly assayed.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: a dimeric/oligomeric membrane-binding module
reference_section_type: OTHER
- term:
id: GO:0009898
label: cytoplasmic side of plasma membrane
evidence_type: IDA
original_reference_id: PMID:26702831
review:
summary: |-
Cdc15 acts on the cytoplasmic (inner) face of the plasma membrane, where its
F-BAR domain binds the membrane and anchors the ring. Precise and core
localization.
action: ACCEPT
reason: Core localization; the F-BAR binds the inner leaflet of the plasma
membrane.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: The **concave F-BAR surface** binds membranes
reference_section_type: OTHER
- term:
id: GO:0032153
label: cell division site
evidence_type: IDA
original_reference_id: PMID:26702831
review:
summary: |-
Direct observation of Cdc15 at the cell division site; core localization.
action: ACCEPT
reason: Core site of Cdc15 function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: scaffolding at the division site
reference_section_type: OTHER
- term:
id: GO:0097753
label: membrane bending
evidence_type: IMP
original_reference_id: PMID:26702831
negated: true
review:
summary: |-
This is a NOT annotation. Although F-BAR proteins are canonically associated
with membrane curvature, the study demonstrates that oligomerization, NOT
membrane bending, underlies Cdc15 function in cytokinesis. The negation is
therefore correct: Cdc15 does not require membrane-bending activity for its
essential cytokinetic role.
action: ACCEPT
reason: The negation is correct and informative; oligomerization rather than
membrane bending underlies Cdc15 function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: F-BAR oligomerization is important for stable ring architecture
reference_section_type: OTHER
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:16687577
review:
summary: |-
Cell-cycle-dependent imaging directly places Cdc15 at the actomyosin ring
during mitosis; core localization.
action: ACCEPT
reason: Core localization; integral contractile-ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial contractile ring during mitosis
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IGI
original_reference_id: PMID:16687577
review:
summary: |-
Genetic interaction evidence that Cdc15 is required for actomyosin ring
formation; core biological process.
action: ACCEPT
reason: Core biological process; Cdc15 is essential for ring assembly.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: early and abundant** contractile-ring component and is
**essential for cytokinesis**
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IMP
original_reference_id: PMID:25688133
review:
summary: |-
Cdc15 promotes ring formation through direct recruitment of the formin Cdc12;
core biological process.
action: ACCEPT
reason: Core biological process with mutant-phenotype support.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: recruiting factors (including the formin Cdc12) and physically
linking the ring to the plasma membrane
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IPI
original_reference_id: PMID:29343550
review:
summary: |-
Cdk1-dependent phosphoinhibition of the formin-F-BAR (Cdc12-Cdc15) interaction
regulates ring formation; the underlying anchor/recruitment activity is core.
action: ACCEPT
reason: Core molecular function; phosphoregulated Cdc12 recruitment.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: hypophosphorylated Cdc15 binds; hyperphosphorylated binds poorly
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: EXP
original_reference_id: PMID:29343550
review:
summary: |-
Phosphoregulation of the Cdc12-Cdc15 interaction opposes contractile-ring
formation; core biological process.
action: ACCEPT
reason: Core biological process.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Cdc12 binding is phosphorylation-state dependent
reference_section_type: OTHER
- term:
id: GO:0071341
label: medial cortical node
evidence_type: IDA
original_reference_id: PMID:21422229
review:
summary: |-
Cdc15 is part of precursor nodes that assemble into the contractile ring;
core localization.
action: ACCEPT
reason: Core localization; nodes are ring precursors.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: helps recruit and organize ring machinery
reference_section_type: OTHER
- term:
id: GO:0030479
label: actin cortical patch
evidence_type: IDA
original_reference_id: PMID:21885283
review:
summary: |-
Cdc15 (with Bzz1) has a distinct role in actin polymerization at sites of
endocytosis, localizing to actin cortical patches. This endocytic role is a
genuine but non-core moonlighting function relative to its essential
cytokinetic scaffolding.
action: KEEP_AS_NON_CORE
reason: Endocytosis-associated cortical-patch localization is a secondary
function distinct from the core cytokinetic role.
- term:
id: GO:0072583
label: clathrin-dependent endocytosis
evidence_type: IMP
original_reference_id: PMID:21885283
review:
summary: |-
Cdc15 contributes to actin polymerization at endocytic sites alongside the
F-BAR protein Bzz1. This is a non-core function distinct from the essential
cytokinetic scaffolding role.
action: KEEP_AS_NON_CORE
reason: Moonlighting endocytic function; not the core cytokinesis role.
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:21885283
review:
summary: |-
Cdc15 directly observed at the contractile ring; core localization.
action: ACCEPT
reason: Core localization; integral ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial cortex/contractile ring
reference_section_type: OTHER
- term:
id: GO:0120104
label: mitotic actomyosin contractile ring, proximal layer
evidence_type: IDA
original_reference_id: PMID:28914606
review:
summary: |-
Nanoscale architecture analysis directly places Cdc15 in the membrane-proximal
layer of the contractile ring; core localization.
action: ACCEPT
reason: Core membrane-proximal ring localization, directly observed.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: physically linking the ring to the plasma membrane
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IPI
original_reference_id: PMID:19139265
review:
summary: |-
The SH3 domains of two PCH family members (Cdc15 and Imp2) cooperate in
assembling the contractile ring; the membrane-anchor activity is core.
action: ACCEPT
reason: Core molecular function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: partly **redundant with the SH3 domain of the paralog Imp2**
reference_section_type: OTHER
- term:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
evidence_type: IMP
original_reference_id: PMID:28784611
review:
summary: |-
Phosphoinositide-mediated ring anchoring resists perpendicular forces to
promote medial cytokinesis; the Cdc15 membrane-anchor activity is central to
this mechanical anchoring.
action: ACCEPT
reason: Core molecular function; mechanical anchoring of the ring to the membrane.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Coupling membrane remodeling and cytoskeletal force generation
reference_section_type: OTHER
- term:
id: GO:0030479
label: actin cortical patch
evidence_type: IDA
original_reference_id: PMID:14602073
review:
summary: |-
Cdc15 observed at actin cortical patches; consistent with its endocytosis-
associated localization. Non-core relative to the cytokinetic scaffold role.
action: KEEP_AS_NON_CORE
reason: Cortical-patch localization tied to the non-core endocytic function.
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:14602073
review:
summary: |-
Spatiotemporal pathway analysis directly places Cdc15 at the contractile ring
during assembly and constriction; core localization.
action: ACCEPT
reason: Core localization; integral ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: early and abundant** contractile-ring component
reference_section_type: OTHER
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:18378776
review:
summary: |-
Cdc15 at the contractile ring in the context of Clp1/Cdc14 phosphatase and
Mid1; core localization.
action: ACCEPT
reason: Core localization; integral ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial contractile ring during mitosis
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26702831
review:
summary: |-
Generic protein-binding annotation arising from interaction assays in the
oligomerization study. The functional interactions are captured by the
membrane-anchor and ring annotations.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; superseded by specific functional terms.
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IMP
original_reference_id: PMID:26702831
review:
summary: |-
Cdc15 oligomerization underlies its function in contractile-ring assembly;
core biological process.
action: ACCEPT
reason: Core biological process.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: F-BAR oligomerization is important for stable ring architecture
reference_section_type: OTHER
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:24790095
review:
summary: |-
Cdc15 at the contractile ring in the context of Blt1 characterization; core
localization.
action: ACCEPT
reason: Core localization; integral ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial cortex/contractile ring
reference_section_type: OTHER
- term:
id: GO:0043332
label: mating projection tip
evidence_type: IDA
original_reference_id: PMID:25825517
review:
summary: |-
During mating/cell fusion, a formin-nucleated actin aster concentrates cell
wall hydrolases; Cdc15 localizes to the mating projection (fusion focus) tip.
This is a non-core, context-specific localization distinct from the core
cytokinetic role.
action: KEEP_AS_NON_CORE
reason: Mating/fusion-specific localization; not the core cytokinesis function.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:7634333
review:
summary: |-
Early characterization of the cdc15 gene noted a cytoplasmic pool. The
functionally relevant localizations are the cortical/division-site pools.
action: KEEP_AS_NON_CORE
reason: Generic compartment; subsumed by specific cortical/ring localizations.
- term:
id: GO:0032153
label: cell division site
evidence_type: IDA
original_reference_id: PMID:7634333
review:
summary: |-
The original cdc15 study showed it is key to F-actin reorganization at mitosis
at the division site; core localization.
action: ACCEPT
reason: Core site of Cdc15 function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: scaffolding at the division site
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IMP
original_reference_id: PMID:7634333
review:
summary: |-
Loss of cdc15 disrupts F-actin reorganization required for ring formation at
mitosis; core biological process.
action: ACCEPT
reason: Core biological process; founding evidence for the Cdc15 cytokinetic role.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: essential for cytokinesis
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25428987
review:
summary: |-
Generic protein-binding annotation from the SH3-domain interaction-network
study; the specific SH3-mediated recruitment of Pxl1/Fic1 is captured by the
anchor and ring-assembly annotations.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; superseded by specific functional terms.
- term:
id: GO:0032153
label: cell division site
evidence_type: IDA
original_reference_id: PMID:25428987
review:
summary: |-
Cdc15 at the cell division site in the SH3-network study; core localization.
action: ACCEPT
reason: Core site of Cdc15 function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: scaffolding at the division site
reference_section_type: OTHER
- term:
id: GO:0110085
label: mitotic actomyosin contractile ring
evidence_type: IDA
original_reference_id: PMID:25428987
review:
summary: |-
Cdc15 at the contractile ring; core localization.
action: ACCEPT
reason: Core localization; integral ring component.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial cortex/contractile ring
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IGI
original_reference_id: PMID:25428987
review:
summary: |-
Cdc15 and Imp2 SH3 domains redundantly ensure efficient cell division;
combined loss abolishes ring formation. Core biological process.
action: ACCEPT
reason: Core biological process; SH3-mediated scaffolding ensures ring assembly.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Combined loss of Cdc15/Imp2 SH3 functions abolishes ring formation
reference_section_type: OTHER
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23966468
review:
summary: |-
Reflects interaction in the Gef2-Nod1 cytokinesis-regulation network. Generic
protein binding is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding; superseded by specific functional terms.
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IMP
original_reference_id: PMID:24127216
review:
summary: |-
The formins Cdc12 and For3 cooperate during ring assembly downstream of
Cdc15-mediated Cdc12 recruitment; core biological process.
action: ACCEPT
reason: Core biological process.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: recruiting factors (including the formin Cdc12)
reference_section_type: OTHER
- term:
id: GO:1903475
label: mitotic actomyosin contractile ring assembly
evidence_type: IMP
original_reference_id: PMID:19139265
review:
summary: |-
SH3-domain cooperation between Cdc15 and Imp2 drives contractile-ring
assembly; core biological process.
action: ACCEPT
reason: Core biological process.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: SH3 domains of Cdc15 and Imp2 cooperatively recruit Pxl1 and
Fic1
reference_section_type: OTHER
- term:
id: GO:0032153
label: cell division site
evidence_type: HDA
original_reference_id: PMID:16823372
review:
summary: |-
High-throughput localization (ORFeome) places Cdc15 at the cell division site;
consistent with directed studies. Core localization.
action: ACCEPT
reason: Core site of Cdc15 function (corroborated by directed studies).
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: scaffolding at the division site
reference_section_type: OTHER
- term:
id: GO:0051286
label: cell tip
evidence_type: HDA
original_reference_id: PMID:16823372
review:
summary: |-
In interphase Cdc15 localizes to cortical patches at the cell tips; the
high-throughput cell-tip localization is consistent with directed imaging.
action: ACCEPT
reason: Core interphase localization at cell tips.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: cortical patches at the cell tips
reference_section_type: OTHER
- term:
id: GO:0032178
label: medial membrane band
evidence_type: IDA
original_reference_id: PMID:15517003
review:
summary: |-
Cdc15 organizes a sterol-rich membrane domain during cytokinesis, consistent
with localization to the medial membrane band at the division site.
action: ACCEPT
reason: Core medial division-site membrane localization.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: medial cortex/contractile ring
reference_section_type: OTHER
- term:
id: GO:0032153
label: cell division site
evidence_type: IDA
original_reference_id: PMID:9786952
review:
summary: |-
Study of imp2 (the Cdc15 paralog) places Cdc15 at the actin ring/division
site; core localization.
action: ACCEPT
reason: Core site of Cdc15 function.
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: scaffolding at the division site
reference_section_type: OTHER
- term:
id: GO:0005737
label: cytoplasm
evidence_type: HDA
original_reference_id: PMID:10759889
review:
summary: |-
Large-scale GFP-fusion localization detected a cytoplasmic pool. Generic
compartment; functionally relevant pools are cortical/division-site.
action: KEEP_AS_NON_CORE
reason: Generic compartment from high-throughput screen; subsumed by specific
localizations.
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
vocabulary mapping, accompanied by conservative changes to GO terms applied by
UniProt
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: PMID:10759889
title: Large-scale screening of intracellular protein localization in living fission
yeast cells by the use of a GFP-fusion genomic DNA library.
findings: []
- id: PMID:12939254
title: The PCH family protein, Cdc15p, recruits two F-actin nucleation pathways
to coordinate cytokinetic actin ring formation in Schizosaccharomyces pombe.
findings: []
- id: PMID:14602073
title: Spatial and temporal pathway for assembly and constriction of the contractile
ring in fission yeast cytokinesis.
findings: []
- id: PMID:15517003
title: Organization of a sterol-rich membrane domain by cdc15p during cytokinesis
in fission yeast.
findings: []
- id: PMID:15933715
title: Etd1p is a novel protein that links the SIN cascade with cytokinesis.
findings: []
- id: PMID:16687577
title: Cell cycle-dependent roles for the FCH-domain protein Cdc15p in formation
of the actomyosin ring in Schizosaccharomyces pombe.
findings: []
- id: PMID:16823372
title: ORFeome cloning and global analysis of protein localization in the fission
yeast Schizosaccharomyces pombe.
findings: []
- id: PMID:16864655
title: Assembly of the cytokinetic contractile ring from a broad band of nodes in
fission yeast.
findings: []
- id: PMID:18378776
title: The Clp1/Cdc14 phosphatase contributes to the robustness of cytokinesis by
association with anillin-related Mid1.
findings: []
- id: PMID:19139265
title: The SH3 domains of two PCH family members cooperate in assembly of the Schizosaccharomyces
pombe contractile ring.
findings: []
- id: PMID:19474789
title: A spatial gradient coordinates cell size and mitotic entry in fission yeast.
findings: []
- id: PMID:21422229
title: Assembly and architecture of precursor nodes during fission yeast cytokinesis.
findings: []
- id: PMID:21885283
title: Distinct roles for F-BAR proteins Cdc15p and Bzz1p in actin polymerization
at sites of endocytosis in fission yeast.
findings: []
- id: PMID:23093943
title: Cytokinesis-based constraints on polarized cell growth in fission yeast.
findings: []
- id: PMID:23615450
title: Separate roles of IQGAP Rng2p in forming and constricting the Schizosaccharomyces
pombe cytokinetic contractile ring.
findings: []
- id: PMID:23966468
title: Cooperation between Rho-GEF Gef2 and its binding partner Nod1 in the regulation
of fission yeast cytokinesis.
findings: []
- id: PMID:24127216
title: The formins Cdc12 and For3 cooperate during contractile ring assembly in
cytokinesis.
findings: []
- id: PMID:24790095
title: Characterization of the roles of Blt1p in fission yeast cytokinesis.
findings: []
- id: PMID:25428987
title: The Cdc15 and Imp2 SH3 domains cooperatively scaffold a network of proteins
that redundantly ensure efficient cell division in fission yeast.
findings: []
- id: PMID:25688133
title: The F-BAR Cdc15 promotes contractile ring formation through the direct recruitment
of the formin Cdc12.
findings: []
- id: PMID:25825517
title: A formin-nucleated actin aster concentrates cell wall hydrolases for cell
fusion in fission yeast.
findings: []
- id: PMID:26702831
title: Oligomerization but Not Membrane Bending Underlies the Function of Certain
F-BAR Proteins in Cell Motility and Cytokinesis.
findings: []
- id: PMID:28784611
title: Phosphoinositide-mediated ring anchoring resists perpendicular forces to
promote medial cytokinesis.
findings: []
- id: PMID:28914606
title: Nanoscale architecture of the Schizosaccharomyces pombe contractile ring.
findings: []
- id: PMID:29343550
title: Cdk1-dependent phosphoinhibition of a formin-F-BAR interaction opposes cytokinetic
contractile ring formation.
findings: []
- id: PMID:31276301
title: A unique kinesin-like protein, Klp8, is involved in mitosis and cell morphology
through microtubule stabilization.
findings: []
- id: PMID:32101481
title: DYRK kinase Pom1 drives F-BAR protein Cdc15 from the membrane to promote
medial division.
findings: []
- id: PMID:33357436
title: Opposite Surfaces of the Cdc15 F-BAR Domain Create a Membrane Platform That
Coordinates Cytoskeletal and Signaling Components for Cytokinesis.
findings: []
- id: PMID:35108037
title: Fission yeast paxillin contains two Cdc15 binding motifs for robust recruitment
to the cytokinetic ring.
findings: []
- id: PMID:7634333
title: The S. pombe cdc15 gene is a key element in the reorganization of F-actin
at mitosis.
findings: []
- id: PMID:9786952
title: imp2, a new component of the actin ring in the fission yeast Schizosaccharomyces
pombe.
findings: []
- id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
title: Falcon deep research report on S. pombe cdc15
findings:
- statement: |
Cdc15 is an essential cytokinetic scaffold with an N-terminal FCH/F-BAR
module and a C-terminal SH3 domain, localizing to cell tips in interphase
and the medial contractile ring during mitosis.
supporting_text: |-
The *S. pombe* protein studied in the primary cytokinesis literature is consistently named **Cdc15/Cdc15p**, described as an **essential cytokinetic scaffold** with an **N-terminal FCH/F-BAR module and a C-terminal SH3 domain**, localizing to **cell tips in interphase** and the **medial contractile ring during mitosis**
reference_section_type: OTHER
- statement: |
The defining molecular role of Cdc15 is to couple the plasma membrane to
contractile-ring components and regulators, organizing proteins needed to
build and stabilize the ring.
supporting_text: |-
Its defining molecular role is to **couple the plasma membrane to contractile-ring components and regulators**, organizing proteins needed to build and stabilize the ring and coordinate furrow ingression/septation
reference_section_type: OTHER
- statement: |
Cdc15 has a three-part architecture: an N-terminal FCH/F-BAR membrane-binding
domain (platform for recruiting factors including formin Cdc12), a central
intrinsically disordered region that is uniquely essential and the major
substrate for multisite phosphorylation, and a C-terminal SH3 domain.
supporting_text: |-
- **N-terminal FCH/F-BAR domain**: a dimeric/oligomeric membrane-binding module that acts as a platform for recruiting factors (including the formin Cdc12) and physically linking the ring to the plasma membrane
reference_section_type: OTHER
- statement: |
The central IDR is uniquely essential and cannot be replaced by the Imp2 IDR;
it is the major substrate for multisite phosphorylation controlling
conformational state and assembly behavior.
supporting_text: |-
a regulatory and interaction module that is **uniquely essential** in Cdc15 (cannot be replaced by the Imp2 IDR) and is the major substrate for multisite phosphorylation controlling conformational state and assembly behavior
reference_section_type: OTHER
- statement: |
The C-terminal SH3 domain recruits ring proteins (notably Fic1 and Pxl1) and
is partly redundant with the SH3 domain of the paralog Imp2.
supporting_text: |-
a proteinβprotein interaction module that recruits specific ring proteins (notably Fic1 and Pxl1) and contributes to ring integrity; it is partly **redundant with the SH3 domain of the paralog Imp2**
reference_section_type: OTHER
- statement: |
The Cdc15 F-BAR domain binds the formin Cdc12 with a Kd of approximately 5
micromolar (ITC) at a stoichiometry of one peptide per Cdc15 dimer; Cdc12
binding is phosphorylation-state dependent (hypophosphorylated binds well).
supporting_text: |-
Cdc15 directly binds Cdc12, and Cdc12 binding is phosphorylation-state dependent (hypophosphorylated Cdc15 binds; hyperphosphorylated binds poorly)
reference_section_type: OTHER
- statement: |
Cdc15 is hyperphosphorylated in interphase and becomes hypophosphorylated
during division; dephosphorylation (involving the Clp1/Cdc14-like phosphatase)
promotes cortical/medial localization, oligomerization, and membrane binding.
supporting_text: |-
Cdc15 is **hyperphosphorylated in interphase** and becomes **hypophosphorylated during division**
reference_section_type: OTHER
- statement: |
Multiple polarity kinases (Pom1, Kin1, Shk1/Pak1, Pck1) phosphorylate the IDR;
phosphorylation inhibits Cdc15 liquid-liquid phase separation and antagonizes
cytokinetic ring assembly, whereas dephosphorylated Cdc15 forms droplets in
vitro and PM-bound condensates in cells.
supporting_text: |-
**Dephosphorylated Cdc15 forms droplets in vitro**, while phosphorylation (e.g., by Pom1) inhibits droplet formation
reference_section_type: OTHER
- statement: |
The membrane-binding concave F-BAR surface and the opposite protein-binding
surface create a membrane platform; F-BAR oligomerization (not membrane
bending) is important for stable ring architecture.
supporting_text: |-
The **concave F-BAR surface** binds membranes, while the **opposite surface** binds protein ligands such as **Cdc12** and **Pxl1**, creating a membrane platform that coordinates cytoskeletal and signaling components. F-BAR oligomerization is important for stable ring architecture
reference_section_type: OTHER
- statement: |
S. pombe Cdc15 is an F-BAR/SH3 scaffold, NOT a protein kinase, and should not
be confused with budding yeast Cdc15 (a Mitotic Exit Network kinase).
supporting_text: |-
do not confuse this target with **budding yeast Cdc15**, which is a **protein kinase** in the Mitotic Exit Network (MEN). The *S. pombe* Cdc15 described here is an **F-BAR/SH3 scaffold**, not a kinase
reference_section_type: OTHER
core_functions:
- description: |-
Cdc15 functions as a membrane-cytoskeleton anchor: its F-BAR domain binds the
cytoplasmic face of the plasma membrane and couples it to the actomyosin
contractile ring, providing a membrane-attached scaffold that recruits and
organizes ring components (notably the formin Cdc12, type-I myosin Myo1, and
the SH3-recruited stabilizers Pxl1 and Fic1) during cytokinesis.
molecular_function:
id: GO:0106006
label: cytoskeletal protein-membrane anchor activity
directly_involved_in:
- id: GO:1903475
label: mitotic actomyosin contractile ring assembly
locations:
- id: GO:0110085
label: mitotic actomyosin contractile ring
- id: GO:0009898
label: cytoplasmic side of plasma membrane
- id: GO:0032153
label: cell division site
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: couple the plasma membrane to contractile-ring components and
regulators
reference_section_type: OTHER
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: Cdc15 F-BAR domain contains a defined Cdc12-binding surface with
micromolar affinity
reference_section_type: OTHER
- description: |-
The Cdc15 F-BAR domain binds membrane phospholipids (concave surface), an
activity essential for anchoring the contractile ring to the inner leaflet of
the plasma membrane; this membrane binding is enhanced by dephosphorylation of
the central IDR during mitosis.
molecular_function:
id: GO:0005543
label: phospholipid binding
directly_involved_in:
- id: GO:1903475
label: mitotic actomyosin contractile ring assembly
locations:
- id: GO:0009898
label: cytoplasmic side of plasma membrane
supported_by:
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: The **concave F-BAR surface** binds membranes, while the
**opposite surface** binds protein ligands
reference_section_type: OTHER
- reference_id: file:SCHPO/cdc15/cdc15-deep-research-falcon.md
supporting_text: a dimeric/oligomeric membrane-binding module
reference_section_type: OTHER
suggested_questions:
- question: |-
What is the precise in vivo contribution of Cdc15 liquid-liquid phase
separation (condensate formation) versus classical oligomerization to
contractile-ring assembly and stability?
- question: |-
How is the combinatorial multisite phosphorylation code (Pom1, Kin1,
Shk1/Pak1, Pck1) integrated to set the threshold for the Cdc15 closed-to-open
conformational switch at mitotic onset?
suggested_experiments:
- description: |-
Use phosphomutant and IDR-deletion alleles combined with live-cell imaging and
quantitative FRAP to measure how Cdc15 condensation/oligomerization state
controls the recruitment dynamics of Cdc12, Myo1, Pxl1, and Fic1 at the ring.
- description: |-
Reconstitute Cdc15 F-BAR on supported lipid bilayers with purified Cdc12 and
Pxl1 peptides to quantify how phosphorylation state tunes simultaneous membrane
binding and partner recruitment (membrane-platform function) in vitro.