snapshot_type: uniprot_record_evidence_extract archive: repository: https://github.com/ai4curation/uniprot-orphan-analysis commit: f6a331cb47f61256ad070bbaa75567094ef64e8a extraction: Original source line ranges with two context lines; not complete records. Structured fields are selected from the same archived snapshots. Sequence values are replaced by lengths and SHA-256 digests. sources: - url: https://rest.uniprot.org/uniprotkb/D2KBH9.json retrieved_at: '2026-10-18T23:38:54.200516+00:00' uniprot_release: '2026_03' - url: https://rest.uniprot.org/uniprotkb/A0A4U8UYW6.json retrieved_at: '2026-10-18T23:38:54.363195+00:00' uniprot_release: '2026_03' - url: https://rest.uniprot.org/proteomes/UP000298663.json retrieved_at: '2026-10-18T23:38:54.515643+00:00' uniprot_release: '2026_03' - url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=30 retrieved_at: '2026-10-18T23:38:56.122532+00:00' uniprot_release: '2026_03' - url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=51 retrieved_at: '2026-10-18T23:38:59.630552+00:00' uniprot_release: '2026_03' - url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=56 retrieved_at: '2026-10-18T23:38:59.931601+00:00' uniprot_release: '2026_03' observations: primary_accession: D2KBH9 alternative_accession: A0A4U8UYW6 sequence_identical: false primary_sequence_length: 418 alternative_sequence_length: 418 shared_uniparc_id: null same_taxon: true reference_proteome: UP000298663 proteome_is_reference: true proteome_taxon_matches: true primary_in_reference_proteome: false alternative_in_reference_proteome: true searched_reference_proteomes: - UP000298663 primary_in_any_reference_proteome: false sampled_history_versions: - 30 - 51 - 56 sampled_versions_with_proteome_links: [] current_records: - primaryAccession: D2KBH9 entryType: UniProtKB reviewed (Swiss-Prot) entryAudit: firstPublicDate: '2017-11-22' lastAnnotationUpdateDate: '2026-09-02' lastSequenceUpdateDate: '2010-02-09' entryVersion: 58 sequenceVersion: 1 organism: scientificName: Steinernema carpocapsae taxonId: 34508 sequence: length: 418 sha256: 03b014a49e0b1a871635834ff111c35830524b5164bcff4be9a3aeb58152ec87 uniProtKBCrossReferences: [] - primaryAccession: A0A4U8UYW6 entryType: UniProtKB unreviewed (TrEMBL) entryAudit: firstPublicDate: '2019-07-31' lastAnnotationUpdateDate: '2026-09-02' lastSequenceUpdateDate: '2019-07-31' entryVersion: 18 sequenceVersion: 1 genes: - orfNames: - evidences: - evidenceCode: ECO:0000313 source: EMBL id: TMS38119.1 value: L596_004914 organism: scientificName: Steinernema carpocapsae taxonId: 34508 sequence: length: 418 sha256: db22e4f3668a9dae6763186d3c707d4ac7799963c5c753f8d3e12bf66fe51c58 uniProtKBCrossReferences: - database: Proteomes id: UP000298663 properties: - key: Component value: Unassembled WGS sequence reference_proteomes: - id: UP000298663 proteomeType: Reference proteome taxonomy: scientificName: Steinernema carpocapsae commonName: Entomopathogenic nematode taxonId: 34508 mnemonic: STECR unisave_records: - entry_version: 30 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=30 entry_date: 09-DEC-2015, entry version 30. proteomes: [] reference_proteome_keyword: false record_text: '' - entry_version: 51 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=51 entry_date: 02-DEC-2020, entry version 51. proteomes: [] reference_proteome_keyword: false record_text: '' - entry_version: 56 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=56 entry_date: 27-NOV-2024, entry version 56. proteomes: [] reference_proteome_keyword: false record_text: '' archived_sources: - path: genes/STECR/nas-8/nas-8-record-evidence.yaml url: https://github.com/ai4curation/uniprot-orphan-analysis/blob/f6a331cb47f61256ad070bbaa75567094ef64e8a/genes/STECR/nas-8/nas-8-record-evidence.yaml sha256: 00222822dee4b8a32a97a6a1728264ccdfe4b7b504eccfcf81473e520a69d5b4 excerpts: - start_line: 26 end_line: 38 text: |2 alternative_sequence_length: 418 shared_uniparc_id: null same_taxon: true reference_proteome: UP000298663 proteome_is_reference: true proteome_taxon_matches: true primary_in_reference_proteome: false alternative_in_reference_proteome: true searched_reference_proteomes: - UP000298663 primary_in_any_reference_proteome: false sampled_history_versions: - 30 - start_line: 1496 end_line: 1501 text: | - entry_version: 30 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=30 entry_date: 09-DEC-2015, entry version 30. proteomes: [] reference_proteome_keyword: false record_text: | - start_line: 1576 end_line: 1581 text: | - entry_version: 51 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=51 entry_date: 02-DEC-2020, entry version 51. proteomes: [] reference_proteome_keyword: false record_text: | - start_line: 1710 end_line: 1715 text: | - entry_version: 56 url: https://rest.uniprot.org/unisave/D2KBH9?format=txt&versions=56 entry_date: 27-NOV-2024, entry version 56. proteomes: [] reference_proteome_keyword: false record_text: | - path: genes/STECR/nas-8/nas-8-bioinformatics/reference-counterparts/comparison.yaml url: https://github.com/ai4curation/uniprot-orphan-analysis/blob/f6a331cb47f61256ad070bbaa75567094ef64e8a/genes/STECR/nas-8/nas-8-bioinformatics/reference-counterparts/comparison.yaml sha256: d26fd00618efed4be6da69693e1758a683062a547f13f7b751dcb948e7f07ea8 excerpts: - start_line: 25 end_line: 29 text: |2 - -v - '1' target_sequence_count: 35146 query_sha256: 9a745fc7c7498ba612855f862695d349e9ab97ce3162c9255d66858eaccbd8d5 targets_sha256: 8068d434445c35d5097e6fa7134463425af180d741383de96e953f7dd53e2f90 - start_line: 44 end_line: 48 text: |2 sha256: 8068d434445c35d5097e6fa7134463425af180d741383de96e953f7dd53e2f90 detailed_alignment_limit: 10 candidate_count: 44 candidates: - accession: A0A4U8UYW6 - start_line: 52 end_line: 64 text: |2 bit_score: 865.0 global_score: 2249.0 query_length: 418 target_length: 418 alignment_columns: 418 identities: 417 mismatches: 1 gap_columns: 0 identity_percent: 99.7608 query_coverage_percent: 100.0 target_coverage_percent: 100.0 substitutions: - query_position: 335 comparison: provenance: query_accession: D2KBH9 run_at: '2026-10-18T23:33:29.831401+00:00' biopython_version: '1.85' mmseqs_version: 18-8cc5c command: - mmseqs - easy-search - genes/STECR/nas-8/nas-8-bioinformatics/reference-counterparts/query.fasta - .cache/orphan-curated/UP000298663.fasta - genes/STECR/nas-8/nas-8-bioinformatics/reference-counterparts/search.tsv - genes/STECR/nas-8/nas-8-bioinformatics/reference-counterparts/tmp - --threads - '4' - -s - '7.5' - -e - 1e-5 - --max-seqs - '1000' - --format-output - query,target,pident,alnlen,qstart,qend,qlen,tstart,tend,tlen,evalue,bits - --remove-tmp-files - '1' - -v - '1' target_sequence_count: 35146 query_sha256: 9a745fc7c7498ba612855f862695d349e9ab97ce3162c9255d66858eaccbd8d5 targets_sha256: 8068d434445c35d5097e6fa7134463425af180d741383de96e953f7dd53e2f90 global_alignment: mode: global matrix: BLOSUM62 open_gap: -10 extend_gap: -0.5 terminal_gaps_penalized: true identity_denominator: All global alignment columns, including gaps coverage_denominator: Full query/target length; numerator is paired nongap residues limitation: MMseqs2 heuristic search; no guarantee of exhaustive retrieval or locus equivalence target_source: url: https://rest.uniprot.org/uniprotkb/stream?query=proteome%3AUP000298663&format=fasta retrieved_at: '2026-10-18T23:32:36.205085+00:00' uniprot_release: '2026_03' sequence_count: 35146 sha256: 8068d434445c35d5097e6fa7134463425af180d741383de96e953f7dd53e2f90 detailed_alignment_limit: 10 candidate_count: 44 retained_alignment_count: 10 candidates: - accession: A0A4U8UYW6 description: tr|A0A4U8UYW6|A0A4U8UYW6_STECR Metalloendopeptidase OS=Steinernema carpocapsae OX=34508 GN=L596_004914 PE=4 SV=1 evalue: 1.159e-284 bit_score: 865.0 global_score: 2249.0 query_length: 418 target_length: 418 alignment_columns: 418 identities: 417 mismatches: 1 gap_columns: 0 identity_percent: 99.7608 query_coverage_percent: 100.0 target_coverage_percent: 100.0 - accession: A0A4U5N1Z8 description: tr|A0A4U5N1Z8|A0A4U5N1Z8_STECR Metalloendopeptidase OS=Steinernema carpocapsae OX=34508 GN=L596_017540 PE=4 SV=1 evalue: 2.059e-95 bit_score: 318.0 global_score: 827.5 query_length: 418 target_length: 366 alignment_columns: 446 identities: 177 mismatches: 161 gap_columns: 108 identity_percent: 39.6861 query_coverage_percent: 80.8612 target_coverage_percent: 92.3497