ProtNLM2 External predictions
View prediction review YAML Β· F6LAX4-protnlm-predictions-review.yaml Β· Review status: COMPLETE
The PP2A A-subunit scaffold makes heterodimerization less precise than existing PP2A annotations. Neuronal localizations and protein antigen binding are incompatible with wheat biology; chromosome-related roles remain unresolved.
Source documents: genes/WHEAT/F6LAX4/F6LAX4-uniprot.txt Β· genes/WHEAT/F6LAX4/F6LAX4-goa.tsv Β· publications/PMID_17174897.md Β· publications/PMID_17608567.md Β· genes/WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md
Review score: 2 = concordant with evidence; 1 = uncertain; 0 = discordant with evidence. This is an assessment score, not a model probability.
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- PMID:17174897: "The PP2A holoenzyme consists of a heterodimeric core enzyme"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "the informative MF is protein-phosphatase regulator/PP2A-complex scaffolding, already captured by the existing IBA annotations"
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "plants have **no neurons**"
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- PMID:17174897: "The PP2A holoenzyme consists of a heterodimeric core enzyme"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "that role is mediated by the **B56 regulatory subunit** binding Shugoshin"
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "plants have **no neurons**"
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- PMID:17174897: "The PP2A holoenzyme consists of a heterodimeric core enzyme"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "that role is mediated by the **B56 regulatory subunit** binding Shugoshin"
- file:WHEAT/F6LAX4/F6LAX4-uniprot.txt: "ID F6LAX4_WHEAT Unreviewed; 587 AA. ... DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. ... DR GO; GO:0005829; C:cytosol; IBA:GO_Central. ... DR GO; GO:0005634; C:nucleus; IBA:GO_Central. ... DR GO; GO:0000159; C:protein phosphatase type 2A complex; IBA:GO_Central. ... DR GO; GO:0019888; F:protein phosphatase regulator activity; IBA:GO_Central. ... DR InterPro; IPR051023; PP2A_Regulatory_Subunit_A. ... DR PANTHER; PTHR10648:SF4; PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATED; 1. ... FT DOMAIN 276..351 ... FT /note="Phosphatase PP2A regulatory subunit A/Splicing"
- PMID:17608567: "ST directly interacts with the PP2A scaffolding A subunit"
- file:WHEAT/F6LAX4/F6LAX4-hypotheses/prediction-animal-specific-terms/openscientist.md: "plants have **no adaptive immune system / antibodies**"