AXIN1 (Axis inhibition protein 1) is a cytosolic scaffold protein that serves as the core component of the beta-catenin destruction complex, which also includes APC, GSK3B, and CK1. AXIN1 coordinates the phosphorylation and subsequent ubiquitination of beta-catenin, thereby negatively regulating the canonical Wnt signaling pathway. Key functional domains include: an N-terminal tankyrase-binding motif, an RGS domain for APC binding, a GSK3B-binding helix (aa 383-400), a beta-catenin binding region, and a C-terminal DIX domain that mediates polymerization and formation of cytoplasmic condensates ("degradasomes"). AXIN1 is regulated by tankyrase-mediated ADP-ribosylation followed by RNF146-dependent ubiquitination and degradation. Loss-of-function mutations in AXIN1 are associated with hepatocellular carcinoma due to aberrant Wnt pathway activation. AXIN1 also has secondary roles in TGF-beta signaling (promoting Smad7 degradation via Arkadia) and JNK signaling, and participates in the AXIN1-HIPK2-TP53 complex upon UV irradiation.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0060090
molecular adaptor activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 functions as a molecular adaptor/scaffold by bringing together components of the beta-catenin destruction complex (GSK3B, APC, CK1, beta-catenin). This adaptor function is directly demonstrated in PMID:9601641 and is the core function of AXIN1.
Reason: IBA annotation is well-supported. AXIN1 is defined as a scaffold protein that coordinates assembly of the destruction complex [PMID:9601641]. Multiple experimental studies confirm this adaptor function.
Supporting Evidence:
PMID:9601641
Axin acts as a scaffold upon which APC, beta-catenin and GSK3 beta assemble to coordinate the regulation of beta-catenin signaling.
file:human/AXIN1/AXIN1-deep-research-falcon.md
model: Edison Scientific Literature
|
|
GO:0019901
protein kinase binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 binds to protein kinases GSK3B (through a defined alpha-helix at aa 383-400) and CK1, which are essential for its function in the destruction complex.
Reason: AXIN1 directly binds GSK3B and CK1 kinases as part of its scaffold function. The GSK3B-binding helix is structurally characterized [PDB:1O9U]. This is a core function.
Supporting Evidence:
PMID:9601641
Human Axin (hAxin) binds directly to beta-catenin, GSK3 beta, and APC in vitro, and the endogenous proteins are found in a complex in cells.
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Negative regulation of canonical Wnt signaling is THE core function of AXIN1. By scaffolding the destruction complex, AXIN1 promotes beta-catenin phosphorylation and degradation, thereby restraining Wnt target gene transcription.
Reason: This is the primary biological function of AXIN1, extensively documented in the literature and supported by genetic and biochemical evidence. Loss of AXIN1 function leads to elevated beta-catenin and Wnt pathway activation.
Supporting Evidence:
PMID:9601641
Overexpression of hAxin strongly promoted the downregulation of wild-type beta-catenin in colon cancer cells
PMID:10644691
PP2C expression relieves Axin-mediated repression of LEF-1-dependent transcription
|
|
GO:0005634
nucleus
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 is predominantly cytoplasmic but can translocate to the nucleus under specific conditions such as UV irradiation (where it colocalizes with DAXX in the AXIN1-HIPK2-TP53 complex).
Reason: Nuclear localization is documented experimentally [PMID:12072559, PMID:21383061]. While not the primary site of AXIN1 function, it represents a real localization pattern.
Supporting Evidence:
PMID:12072559
Subcellular distribution of Wnt pathway proteins in normal and neoplastic colon
|
|
GO:0005886
plasma membrane
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 can localize to the plasma membrane, particularly during Wnt signaling when it is recruited to LRP5/6 receptors. Membrane localization is regulated by MACF1.
Reason: Plasma membrane localization is consistent with AXIN1's role in Wnt signalosome assembly and its interaction with LRP5/6 co-receptors upon Wnt stimulation. Documented by immunohistochemistry in PMID:12072559.
|
|
GO:0008013
beta-catenin binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 directly binds beta-catenin through a defined binding region (aa 434-502). This interaction is essential for AXIN1's function in promoting beta-catenin phosphorylation and degradation.
Reason: Beta-catenin binding is a core molecular function of AXIN1, well-documented experimentally.
Supporting Evidence:
PMID:9601641
Human Axin (hAxin) binds directly to beta-catenin, GSK3 beta, and APC in vitro
|
|
GO:0030877
beta-catenin destruction complex
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 is a core component of the beta-catenin destruction complex. It serves as the central scaffold that brings together APC, GSK3B, CK1, and beta-catenin.
Reason: Membership in the beta-catenin destruction complex is THE defining characteristic of AXIN1 function. This is extensively documented in the literature.
Supporting Evidence:
PMID:9601641
Axin acts as a scaffold upon which APC, beta-catenin and GSK3 beta assemble
|
|
GO:0031625
ubiquitin protein ligase binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 binds to E3 ubiquitin ligases including RNF111 (Arkadia) and RNF146. The RNF111 interaction promotes Smad7 degradation. RNF146 binding leads to AXIN1 ubiquitination following ADP-ribosylation by tankyrase.
Reason: Ubiquitin ligase binding is functionally important for both AXIN1's role in promoting Smad7 degradation and for AXIN1's own regulation via the tankyrase-RNF146 axis.
Supporting Evidence:
PMID:16601693
Axin activates TGF-beta signaling by forming a multimeric complex consisting of Smad7 and ubiquitin E3 ligase Arkadia
|
|
GO:0032436
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 promotes the proteasomal degradation of beta-catenin by facilitating its phosphorylation, which leads to recognition by beta-TrCP E3 ligase and ubiquitination.
Reason: This accurately describes AXIN1's downstream effect on beta-catenin, which is targeted for proteasomal degradation after being phosphorylated by the destruction complex.
Supporting Evidence:
PMID:9601641
Overexpression of hAxin strongly promoted the downregulation of wild-type beta-catenin
|
|
GO:0042802
identical protein binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 self-associates (homodimerizes) through its DIX domain. This polymerization is important for formation of cytoplasmic condensates/degradasomes.
Reason: AXIN1 homodimerization/polymerization via the DIX domain is well-documented and functionally important for destruction complex assembly and condensate formation.
Supporting Evidence:
PMID:10811618
Structural basis of the Axin-adenomatous polyposis coli interaction
|
|
GO:0048468
cell development
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: AXIN1's role in Wnt signaling regulation impacts cell development processes. Wnt signaling is a major developmental pathway.
Reason: While AXIN1 clearly affects developmental processes through Wnt pathway regulation, "cell development" is a broad pleiotropic outcome rather than a direct molecular function. The core function is Wnt pathway regulation; developmental effects are downstream.
|
|
GO:0070411
I-SMAD binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: AXIN1 binds to inhibitory SMADs including SMAD7. This interaction promotes Smad7 degradation via Arkadia (RNF111) and enhances TGF-beta signaling.
Reason: I-SMAD (Smad7) binding is experimentally validated [PMID:16601693, PMID:18593713] and represents a legitimate secondary function of AXIN1 as a scaffold in TGF-beta signaling.
Supporting Evidence:
PMID:16601693
Axin activates TGF-beta signaling by forming a multimeric complex consisting of Smad7 and ubiquitin E3 ligase Arkadia
PMID:18593713
A Smad7-Axin interaction disassociates GSK-3beta and beta-catenin from Axin
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: IEA annotation from UniProt subcellular location mapping. Nuclear localization has experimental support.
Reason: Consistent with IBA annotation above and IDA evidence from PMID:12072559 and PMID:21383061.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Cytoplasmic localization is the predominant localization for AXIN1 and the site of destruction complex function.
Reason: AXIN1 is primarily cytoplasmic where it forms the destruction complex. Well-supported by multiple experimental studies.
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Plasma membrane localization is consistent with AXIN1's recruitment to Wnt receptors.
Reason: Consistent with IBA annotation above and experimental evidence.
|
|
GO:0006915
apoptotic process
|
IEA
GO_REF:0000043 |
MARK AS OVER ANNOTATED |
Summary: This IEA annotation is derived from UniProt keyword KW-0053 (Apoptosis). UniProt notes AXIN1 as a "Component of the AXIN1-HIPK2-TP53 complex which controls cell growth, apoptosis and development" and that AXIN1 "Facilitates the phosphorylation of TP53 by HIPK2 upon ultraviolet irradiation." However, this represents a secondary/pleiotropic function rather than AXIN1's core function.
Reason: AXIN1's core function is as a scaffold in the Wnt/beta-catenin pathway. While AXIN1 participates in the AXIN1-HIPK2-TP53 complex that can influence apoptosis upon UV irradiation, this is a secondary function. The deep research document makes no mention of apoptosis as a primary function. Any apoptotic effects are likely downstream/pleiotropic consequences of Wnt pathway modulation or secondary functions in stress response, not the core biochemical function of the protein.
|
|
GO:0016020
membrane
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Generic membrane localization. AXIN1 can associate with the plasma membrane.
Reason: While more specific than needed (plasma membrane is more informative), not incorrect.
|
|
GO:0016055
Wnt signaling pathway
|
IEA
GO_REF:0000043 |
MODIFY |
Summary: AXIN1 is involved in the Wnt signaling pathway as a negative regulator.
Reason: While technically correct, this term is too broad. AXIN1 specifically negatively regulates canonical Wnt signaling. The more specific term GO:0090090 (negative regulation of canonical Wnt signaling pathway) is already present and preferred.
Proposed replacements:
negative regulation of canonical Wnt signaling pathway
|
|
GO:0030178
negative regulation of Wnt signaling pathway
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: AXIN1 negatively regulates Wnt signaling. This is accurate but less specific than the canonical Wnt pathway annotation.
Reason: Correct annotation. AXIN1 is primarily known for regulating canonical Wnt signaling, but this broader term is acceptable as IEA.
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: IEA annotation from InterPro domain mapping (Axin-like family). This correctly captures the core function.
Reason: Core function of AXIN1, supported by domain analysis and experimental evidence.
|
|
GO:0005515
protein binding
|
IPI
PMID:10481074 A GSK3-binding peptide from FRAT1 selectively inhibits the G... |
MODIFY |
Summary: Interaction with GSK3B demonstrated via GSK3-binding peptide studies.
Reason: "Protein binding" is too generic. The interaction is specifically with GSK3B, which is better captured by GO:0019901 (protein kinase binding) or more specifically GO:0120283 (protein serine/threonine kinase binding).
Proposed replacements:
protein serine/threonine kinase binding
Supporting Evidence:
PMID:10481074
A GSK3-binding peptide from FRAT1 selectively inhibits the GSK3-catalysed phosphorylation of axin and beta-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:10644691 Protein phosphatase 2Calpha dephosphorylates axin and activa... |
MODIFY |
Summary: Interaction with PP2CA (PPM1A) demonstrated - protein phosphatase that dephosphorylates AXIN1.
Reason: The specific interaction is with a protein phosphatase. A more informative term would be appropriate if one exists for phosphatase binding.
Proposed replacements:
enzyme binding
Supporting Evidence:
PMID:10644691
Protein phosphatase 2Calpha dephosphorylates axin and activates LEF-1-dependent transcription.
|
|
GO:0005515
protein binding
|
IPI
PMID:10811618 Structural basis of the Axin-adenomatous polyposis coli inte... |
MODIFY |
Summary: Structural characterization of AXIN1-APC interaction. The paper provides crystal structure of the Axin-APC interaction interface.
Reason: The specific interaction is with APC tumor suppressor. While no specific "APC binding" term exists, this interaction is functionally important for destruction complex assembly.
Proposed replacements:
protein domain specific binding
Supporting Evidence:
PMID:10811618
Structural basis of the Axin-adenomatous polyposis coli interaction.
|
|
GO:0005515
protein binding
|
IPI
PMID:11738041 The structure of phosphorylated GSK-3beta complexed with a p... |
MODIFY |
Summary: Structure of phosphorylated GSK3B with FRATtide peptide that inhibits beta-catenin phosphorylation; context involves AXIN1-GSK3B interaction.
Reason: Interaction with GSK3B is specifically protein kinase binding.
Proposed replacements:
protein serine/threonine kinase binding
Supporting Evidence:
PMID:11738041
The structure of phosphorylated GSK-3beta complexed with a peptide, FRATtide, that inhibits beta-catenin phosphorylation.
|
|
GO:0005515
protein binding
|
IPI
PMID:16169070 A human protein-protein interaction network: a resource for ... |
ACCEPT |
Summary: High-throughput protein-protein interaction network study.
Reason: Generic protein binding from large-scale study. While less informative, not incorrect. Multiple specific interactions were identified.
Supporting Evidence:
PMID:16169070
A human protein-protein interaction network: a resource for annotating the proteome.
|
|
GO:0005515
protein binding
|
IPI
PMID:16293619 Beta-catenin-ligand interactions. |
MODIFY |
Summary: Study of beta-catenin-ligand interactions including AXIN1.
Reason: The specific interaction is with beta-catenin, which has a specific binding term.
Proposed replacements:
beta-catenin binding
Supporting Evidence:
PMID:16293619
2005 Nov 17. Thermodynamics of beta-catenin-ligand interactions: the roles of the N- and C-terminal tails in modulating binding affinity.
|
|
GO:0005515
protein binding
|
IPI
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
MODIFY |
Summary: Interaction with SMAD7 and RNF111 (Arkadia) demonstrated.
Reason: The specific interactions are with SMAD7 (I-SMAD binding) and RNF111 (ubiquitin ligase binding), which are captured by more specific terms.
Proposed replacements:
I-SMAD binding
ubiquitin protein ligase binding
Supporting Evidence:
PMID:16601693
Apr 6. Axin is a scaffold protein in TGF-beta signaling that promotes degradation of Smad7 by Arkadia.
|
|
GO:0005515
protein binding
|
IPI
PMID:17318175 Protein phosphatase 1 regulates assembly and function of the... |
MODIFY |
Summary: Study of PP1 regulation of the destruction complex; demonstrates AXIN1-PP1CA and AXIN1-GSK3A/B interactions.
Reason: Specific kinase and phosphatase interactions are documented.
Proposed replacements:
protein serine/threonine kinase binding
Supporting Evidence:
PMID:17318175
Feb 22. Protein phosphatase 1 regulates assembly and function of the beta-catenin degradation complex.
|
|
GO:0005515
protein binding
|
IPI
PMID:17318191 Bcr-Abl stabilizes beta-catenin in chronic myeloid leukemia ... |
MODIFY |
Summary: Study of Bcr-Abl effects on beta-catenin stabilization; AXIN1 interactions with beta-catenin and GSK3B.
Reason: Specific interactions with beta-catenin and GSK3B are better captured by specific terms.
Proposed replacements:
beta-catenin binding
Supporting Evidence:
PMID:17318191
Bcr-Abl stabilizes beta-catenin in chronic myeloid leukemia through its tyrosine phosphorylation.
|
|
GO:0005515
protein binding
|
IPI
PMID:17510365 Wilms tumor suppressor WTX negatively regulates WNT/beta-cat... |
ACCEPT |
Summary: Study of WTX (AMER1) negative regulation of Wnt signaling; interactions with multiple destruction complex components.
Reason: Multiple interactions demonstrated; generic protein binding acceptable.
Supporting Evidence:
PMID:17510365
Wilms tumor suppressor WTX negatively regulates WNT/beta-catenin signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:17601533 Two functionally distinct Axin-like proteins regulate canoni... |
ACCEPT |
Summary: Study in C. elegans of Axin-like proteins.
Reason: Interaction with GSK3B ortholog demonstrated.
Supporting Evidence:
PMID:17601533
2007 Jun 6. Two functionally distinct Axin-like proteins regulate canonical Wnt signaling in C.
|
|
GO:0005515
protein binding
|
IPI
PMID:18786926 Identification of a link between the SAMP repeats of adenoma... |
ACCEPT |
Summary: Study of DDEF (ASAP1) interaction with APC SAMP repeats.
Reason: Context involves AXIN1 interactions in the APC complex.
Supporting Evidence:
PMID:18786926
2008 Sep 11. Identification of a link between the SAMP repeats of adenomatous polyposis coli tumor suppressor and the Src homology 3 domain of DDEF.
|
|
GO:0005515
protein binding
|
IPI
PMID:19131971 The Axin1 scaffold protein promotes formation of a degradati... |
ACCEPT |
Summary: AXIN1 promotes c-Myc degradation by scaffolding a destruction complex for c-Myc.
Reason: Demonstrates AXIN1-MYC interaction as part of a c-Myc degradation complex.
Supporting Evidence:
PMID:19131971
The Axin1 scaffold protein promotes formation of a degradation complex for c-Myc.
|
|
GO:0005515
protein binding
|
IPI
PMID:19166851 Kaiso is a bimodal modulator for Wnt/beta-catenin signaling. |
MODIFY |
Summary: Kaiso as a bimodal modulator for Wnt signaling; AXIN1-beta-catenin interactions.
Reason: Specific interaction with beta-catenin.
Proposed replacements:
beta-catenin binding
Supporting Evidence:
PMID:19166851
2009 Jan 21. Kaiso is a bimodal modulator for Wnt/beta-catenin signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:19202075 Beta-arrestin links endothelin A receptor to beta-catenin si... |
ACCEPT |
Summary: Beta-arrestin links endothelin A receptor to beta-catenin signaling; AXIN1 interactions.
Reason: Multiple interactions in Wnt signaling context.
Supporting Evidence:
PMID:19202075
Beta-arrestin links endothelin A receptor to beta-catenin signaling to induce ovarian cancer cell invasion and metastasis.
|
|
GO:0005515
protein binding
|
IPI
PMID:19249679 Oncogenic function of ATDC in pancreatic cancer through Wnt ... |
ACCEPT |
Summary: ATDC promotes Wnt signaling by stabilizing beta-catenin; interacts with AXIN1.
Reason: Novel interactor identified.
Supporting Evidence:
PMID:19249679
Oncogenic function of ATDC in pancreatic cancer through Wnt pathway activation and beta-catenin stabilization.
|
|
GO:0005515
protein binding
|
IPI
PMID:19303846 Disrupted in schizophrenia 1 regulates neuronal progenitor p... |
ACCEPT |
Summary: DISC1 regulates neuronal progenitor proliferation via GSK3B-beta-catenin signaling; AXIN1-GSK3B context.
Reason: Destruction complex interactions.
Supporting Evidence:
PMID:19303846
Disrupted in schizophrenia 1 regulates neuronal progenitor proliferation via modulation of GSK3beta/beta-catenin signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:19390532 Axin localizes to the centrosome and is involved in microtub... |
ACCEPT |
Summary: AXIN1 localizes to centrosomes and is involved in microtubule nucleation; interacts with gamma-tubulin.
Reason: Novel function for AXIN1 in microtubule organization.
Supporting Evidence:
PMID:19390532
Axin localizes to the centrosome and is involved in microtubule nucleation.
|
|
GO:0005515
protein binding
|
IPI
PMID:19759537 Tankyrase inhibition stabilizes axin and antagonizes Wnt sig... |
MODIFY |
Summary: Tankyrase inhibition stabilizes AXIN1; demonstrates AXIN1-tankyrase interaction and its role in AXIN1 turnover.
Reason: Specific interaction with tankyrase (PARP enzyme). Enzyme binding is more appropriate.
Proposed replacements:
enzyme binding
Supporting Evidence:
PMID:19759537
Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling.
|
|
GO:0005515
protein binding
|
IPI
PMID:20080667 Role of DAB2IP in modulating epithelial-to-mesenchymal trans... |
ACCEPT |
Summary: DAB2IP modulates EMT; AXIN1 interactions in Wnt context.
Reason: Novel interactor.
Supporting Evidence:
PMID:20080667
Role of DAB2IP in modulating epithelial-to-mesenchymal transition and prostate cancer metastasis.
|
|
GO:0005515
protein binding
|
IPI
PMID:21057547 AXIN is an essential co-activator for the promyelocytic leuk... |
MODIFY |
Summary: AXIN1 is an essential co-activator for PML in p53 activation; demonstrates AXIN1-TP53 interaction.
Reason: Specific interaction with p53 (TP53).
Proposed replacements:
p53 binding
Supporting Evidence:
PMID:21057547
Nov 8. AXIN is an essential co-activator for the promyelocytic leukemia protein in p53 activation.
|
|
GO:0005515
protein binding
|
IPI
PMID:21242974 Methylation by protein arginine methyltransferase 1 increase... |
ACCEPT |
Summary: PRMT1 methylation increases AXIN1 stability; interactions with beta-catenin and GSK3B.
Reason: Multiple interactions demonstrated.
Supporting Evidence:
PMID:21242974
Methylation by protein arginine methyltransferase 1 increases stability of Axin, a negative regulator of Wnt signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:21245303 Dishevelled interacts with the DIX domain polymerization int... |
ACCEPT |
Summary: DVL interacts with AXIN1 DIX domain to interfere with beta-catenin regulation.
Reason: AXIN1-DVL interaction through DIX domain polymerization interface.
Supporting Evidence:
PMID:21245303
Dishevelled interacts with the DIX domain polymerization interface of Axin to interfere with its function in down-regulating β-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:21988832 Toward an understanding of the protein interaction network o... |
ACCEPT |
Summary: Human liver protein interaction network study.
Reason: Large-scale interaction study.
Supporting Evidence:
PMID:21988832
Toward an understanding of the protein interaction network of the human liver.
|
|
GO:0005515
protein binding
|
IPI
PMID:22153077 Structural basis and sequence rules for substrate recognitio... |
MODIFY |
Summary: Structural basis for tankyrase substrate recognition; AXIN1-TNKS2 interaction.
Reason: Specific interaction with tankyrase TNKS2.
Proposed replacements:
enzyme binding
Supporting Evidence:
PMID:22153077
Structural basis and sequence rules for substrate recognition by Tankyrase explain the basis for cherubism disease.
|
|
GO:0005515
protein binding
|
IPI
PMID:22682247 Wnt signaling through inhibition of β-catenin degradation in... |
ACCEPT |
Summary: Wnt signaling through inhibition of beta-catenin degradation in an intact AXIN1 complex.
Reason: Multiple destruction complex interactions.
Supporting Evidence:
PMID:22682247
Wnt signaling through inhibition of β-catenin degradation in an intact Axin1 complex.
|
|
GO:0005515
protein binding
|
IPI
PMID:22773187 Dual functions of DP1 promote biphasic Wnt-on and Wnt-off st... |
ACCEPT |
Summary: DP1 promotes biphasic Wnt states during neural patterning; AXIN1 interactions.
Reason: Wnt pathway context.
Supporting Evidence:
PMID:22773187
Dual functions of DP1 promote biphasic Wnt-on and Wnt-off states during anteroposterior neural patterning.
|
|
GO:0005515
protein binding
|
IPI
PMID:23455922 Interlaboratory reproducibility of large-scale human protein... |
ACCEPT |
Summary: Interlaboratory AP-MS reproducibility study.
Reason: Large-scale interaction study.
Supporting Evidence:
PMID:23455922
Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS.
|
|
GO:0005515
protein binding
|
IPI
PMID:23602568 The protein interaction landscape of the human CMGC kinase g... |
MODIFY |
Summary: CMGC kinase interaction landscape; GSK3A/B interactions.
Reason: Specific kinase interactions.
Proposed replacements:
protein serine/threonine kinase binding
Supporting Evidence:
PMID:23602568
2013 Apr 18. The protein interaction landscape of the human CMGC kinase group.
|
|
GO:0005515
protein binding
|
IPI
PMID:24976009 YAP/TAZ incorporation in the β-catenin destruction complex o... |
ACCEPT |
Summary: YAP/TAZ incorporation in the beta-catenin destruction complex.
Reason: Novel interactions with YAP1 in destruction complex context.
Supporting Evidence:
PMID:24976009
YAP/TAZ incorporation in the β-catenin destruction complex orchestrates the Wnt response.
|
|
GO:0005515
protein binding
|
IPI
PMID:25241761 Using an in situ proximity ligation assay to systematically ... |
ACCEPT |
Summary: Proximity ligation assay profiling of endogenous protein interactions in Wnt pathway.
Reason: Wnt pathway interactions validated.
Supporting Evidence:
PMID:25241761
Oct 9. Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a pathway network.
|
|
GO:0005515
protein binding
|
IPI
PMID:25873176 TGIF governs a feed-forward network that empowers Wnt signal... |
ACCEPT |
Summary: TGIF governs a feed-forward network empowering Wnt signaling; AXIN1-TGIF1 interaction.
Reason: Novel interactor in Wnt pathway.
Supporting Evidence:
PMID:25873176
TGIF governs a feed-forward network that empowers Wnt signaling to drive mammary tumorigenesis.
|
|
GO:0005515
protein binding
|
IPI
PMID:26496610 Human interactome in three quantitative dimensions. |
ACCEPT |
Summary: Human interactome in three quantitative dimensions.
Reason: Large-scale quantitative interactome study.
Supporting Evidence:
PMID:26496610
Oct 22. A human interactome in three quantitative dimensions organized by stoichiometries and abundances.
|
|
GO:0005515
protein binding
|
IPI
PMID:26871637 Widespread Expansion of Protein Interaction Capabilities by ... |
ACCEPT |
Summary: Alternative splicing expansion of protein interaction capabilities.
Reason: Large-scale splicing-interaction study.
Supporting Evidence:
PMID:26871637
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
|
|
GO:0005515
protein binding
|
IPI
PMID:27098453 WDR26 is a new partner of Axin1 in the canonical Wnt signali... |
ACCEPT |
Summary: WDR26 is a new partner of AXIN1 in canonical Wnt signaling.
Reason: Novel interactor in Wnt pathway characterized.
Supporting Evidence:
PMID:27098453
May 3. WDR26 is a new partner of Axin1 in the canonical Wnt signaling pathway.
|
|
GO:0005515
protein binding
|
IPI
PMID:29568061 An AP-MS- and BioID-compatible MAC-tag enables comprehensive... |
ACCEPT |
Summary: AP-MS and BioID compatible MAC-tag for interaction and localization mapping.
Reason: Large-scale interaction study.
Supporting Evidence:
PMID:29568061
An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping of protein interactions and subcellular localizations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32707033 Kinase Interaction Network Expands Functional and Disease Ro... |
ACCEPT |
Summary: Kinase interaction network expands functional and disease roles of kinases.
Reason: Large-scale kinase interaction study.
Supporting Evidence:
PMID:32707033
2020 Jul 23. Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases.
|
|
GO:0005515
protein binding
|
IPI
PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... |
ACCEPT |
Summary: Interactome mapping of neurodegenerative disease proteins.
Reason: Large-scale interaction study.
Supporting Evidence:
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
ACCEPT |
Summary: Dual proteome-scale networks reveal cell-specific interactome remodeling.
Reason: Large-scale interaction study.
Supporting Evidence:
PMID:33961781
2021 May 6. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:35271311 OpenCell Endogenous tagging for the cartography of human cel... |
ACCEPT |
Summary: OpenCell endogenous tagging for cellular organization cartography.
Reason: Large-scale localization and interaction study.
Supporting Evidence:
PMID:35271311
2022 Mar 11. OpenCell: Endogenous tagging for the cartography of human cellular organization.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:10811618 Structural basis of the Axin-adenomatous polyposis coli inte... |
ACCEPT |
Summary: AXIN1 homodimerization demonstrated in structural study of AXIN1-APC interaction.
Reason: Self-association/homodimerization is important for AXIN1 function and condensate formation via DIX domain.
Supporting Evidence:
PMID:10811618
Structural basis of the Axin-adenomatous polyposis coli interaction.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:16169070 A human protein-protein interaction network: a resource for ... |
ACCEPT |
Summary: High-throughput interaction network study includes AXIN1 self-interaction.
Reason: Homodimerization confirmed.
Supporting Evidence:
PMID:16169070
A human protein-protein interaction network: a resource for annotating the proteome.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:21245303 Dishevelled interacts with the DIX domain polymerization int... |
ACCEPT |
Summary: DVL-AXIN1 interaction via DIX domain polymerization interface; includes AXIN1 homo-oligomerization.
Reason: Homodimerization via DIX domain demonstrated.
Supporting Evidence:
PMID:21245303
Dishevelled interacts with the DIX domain polymerization interface of Axin to interfere with its function in down-regulating β-catenin.
|
|
GO:0002039
p53 binding
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: AXIN1 interacts with TP53 as part of the AXIN1-HIPK2-TP53 complex.
Reason: TP53 binding is demonstrated but represents a secondary function of AXIN1 in stress response, not its core function in Wnt signaling.
|
|
GO:0005938
cell cortex
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Cell cortex localization transferred from mouse ortholog.
Reason: Consistent with AXIN1 localization at cell periphery/plasma membrane.
|
|
GO:0008013
beta-catenin binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA from mouse ortholog. Beta-catenin binding is a core function.
Reason: Core function, well-supported by experimental evidence.
|
|
GO:0015630
microtubule cytoskeleton
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: AXIN1 has been shown to localize to centrosomes and microtubule organizing centers.
Reason: Microtubule localization is documented [PMID:19390532] but represents a secondary localization/function, not the primary cytoplasmic destruction complex function.
|
|
GO:0019901
protein kinase binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA from mouse ortholog. AXIN1 binds GSK3B and CK1 kinases.
Reason: Core function - kinase binding is essential for destruction complex scaffolding.
|
|
GO:0019904
protein domain specific binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 binds specific domains including APC SAMP repeats and beta-catenin armadillo repeats.
Reason: AXIN1 binds specific domains of its interaction partners.
|
|
GO:0030877
beta-catenin destruction complex
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA from mouse ortholog. Core complex membership.
Reason: Defining characteristic of AXIN1.
|
|
GO:0031410
cytoplasmic vesicle
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: Cytoplasmic vesicle localization from mouse ortholog.
Reason: May relate to membrane trafficking or Wnt signalosome dynamics, but not a primary localization site for AXIN1 function.
|
|
GO:0031625
ubiquitin protein ligase binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation. AXIN1 binds E3 ligases RNF146 and RNF111.
Reason: Important for both AXIN1 regulation (RNF146) and AXIN1 function in Smad7 degradation (RNF111).
|
|
GO:0032991
protein-containing complex
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 is part of the beta-catenin destruction complex.
Reason: AXIN1 is part of multiple protein complexes including the destruction complex.
|
|
GO:0035591
signaling adaptor activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 functions as a signaling adaptor in Wnt and TGF-beta pathways.
Reason: Core function - AXIN1 is a scaffold/adaptor protein.
|
|
GO:0042802
identical protein binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA from mouse ortholog. AXIN1 homodimerizes via DIX domain.
Reason: Self-association is important for destruction complex function and condensate formation.
|
|
GO:0042803
protein homodimerization activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 homodimerizes through its DIX domain.
Reason: DIX domain-mediated homodimerization is well-documented.
|
|
GO:0046330
positive regulation of JNK cascade
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: AXIN1 activates JNK signaling independently of Wnt signaling.
Reason: JNK activation is a legitimate secondary function of AXIN1 distinct from its Wnt pathway role, but not the core function.
Supporting Evidence:
PMID:12192039
I-mfa domain proteins interact with Axin and affect its regulation of the Wnt and c-Jun N-terminal kinase signaling pathways.
|
|
GO:0070411
I-SMAD binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA from mouse ortholog. AXIN1 binds SMAD7.
Reason: Experimentally validated [PMID:16601693].
|
|
GO:0070412
R-SMAD binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 interaction with R-SMADs including SMAD3.
Reason: Part of AXIN1's role in TGF-beta signaling.
|
|
GO:1990756
ubiquitin-like ligase-substrate adaptor activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 acts as adaptor bringing together substrates (Smad7, beta-catenin) and E3 ligases.
Reason: AXIN1 bridges substrates to E3 ligases in both Wnt (beta-catenin to beta-TrCP) and TGF-beta (Smad7 to Arkadia) pathways.
|
|
GO:1990909
Wnt signalosome
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: AXIN1 is recruited to the Wnt signalosome upon Wnt stimulation.
Reason: Part of AXIN1's role in Wnt signal transduction.
|
|
GO:0005654
nucleoplasm
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: IDA from HPA immunofluorescence data showing nucleoplasm localization.
Reason: AXIN1 can localize to nucleus under certain conditions.
|
|
GO:0005730
nucleolus
|
IDA
GO_REF:0000052 |
KEEP AS NON CORE |
Summary: IDA from HPA immunofluorescence data showing nucleolus localization.
Reason: Nucleolar localization may be cell type or condition dependent; not the primary site of AXIN1 function.
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
NAS
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: AXIN1 promotes proteasomal degradation of beta-catenin as part of the destruction complex function.
Reason: Core function - AXIN1 scaffolds the machinery that leads to beta-catenin ubiquitination and proteasomal degradation.
Supporting Evidence:
PMID:9601641
Overexpression of hAxin strongly promoted the downregulation of wild-type beta-catenin in colon cancer cells
|
|
GO:0043539
protein serine/threonine kinase activator activity
|
IDA
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: AXIN1 dramatically facilitates GSK3B phosphorylation of APC and beta-catenin by bringing kinase and substrates together.
Reason: Core function - AXIN1 acts as a scaffold to enhance GSK3B kinase activity toward its substrates in the destruction complex.
Supporting Evidence:
PMID:9601641
hAxin dramatically facilitated the phosphorylation of APC and beta-catenin by GSK3 beta in vitro
|
|
GO:0030877
beta-catenin destruction complex
|
IDA
PMID:18593713 Smad7 stabilizes beta-catenin binding to E-cadherin complex ... |
ACCEPT |
Summary: IDA evidence for destruction complex membership from study of Smad7-Axin interaction.
Reason: Core complex membership.
Supporting Evidence:
PMID:18593713
2008 Jun 30. Smad7 stabilizes beta-catenin binding to E-cadherin complex and promotes cell-cell adhesion.
|
|
GO:0120283
protein serine/threonine kinase binding
|
IPI
PMID:18593713 Smad7 stabilizes beta-catenin binding to E-cadherin complex ... |
ACCEPT |
Summary: AXIN1 binds GSK3B as demonstrated in this study.
Reason: GSK3B binding is a core function.
Supporting Evidence:
PMID:18593713
2008 Jun 30. Smad7 stabilizes beta-catenin binding to E-cadherin complex and promotes cell-cell adhesion.
|
|
GO:1904885
beta-catenin destruction complex assembly
|
IDA
PMID:18593713 Smad7 stabilizes beta-catenin binding to E-cadherin complex ... |
ACCEPT |
Summary: AXIN1 is required for assembly of the destruction complex.
Reason: Core function - AXIN1 is the central scaffold for destruction complex assembly.
Supporting Evidence:
PMID:18593713
2008 Jun 30. Smad7 stabilizes beta-catenin binding to E-cadherin complex and promotes cell-cell adhesion.
|
|
GO:0031398
positive regulation of protein ubiquitination
|
IMP
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
ACCEPT |
Summary: AXIN1 promotes Smad7 ubiquitination by recruiting Arkadia E3 ligase.
Reason: Demonstrated function in TGF-beta signaling.
Supporting Evidence:
PMID:16601693
Axin and Arkadia cooperate with each other in promoting Smad7 ubiquitination
|
|
GO:0031625
ubiquitin protein ligase binding
|
IPI
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
ACCEPT |
Summary: AXIN1 binds Arkadia (RNF111) E3 ubiquitin ligase.
Reason: Interaction with E3 ligases is important for AXIN1 function.
Supporting Evidence:
PMID:16601693
Axin activates TGF-beta signaling by forming a multimeric complex consisting of Smad7 and ubiquitin E3 ligase Arkadia
|
|
GO:1990756
ubiquitin-like ligase-substrate adaptor activity
|
IMP
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
ACCEPT |
Summary: AXIN1 acts as adaptor bringing Smad7 substrate to Arkadia E3 ligase.
Reason: Scaffold/adaptor function between substrate and E3 ligase.
Supporting Evidence:
PMID:16601693
Axin is a scaffold protein in TGF-beta signaling that promotes degradation of Smad7 by Arkadia
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195275 |
ACCEPT |
Summary: TAS from Reactome pathway for phosphorylation of APC in the destruction complex.
Reason: Cytosolic localization is the primary site of AXIN1 function in the destruction complex.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195280 |
ACCEPT |
Summary: TAS from Reactome - dissociation of beta-catenin from Axin and association with phospho-APC.
Reason: Cytosolic localization is primary.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195283 |
ACCEPT |
Summary: TAS from Reactome - GSK3 phosphorylation of beta-catenin at Ser37.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195287 |
ACCEPT |
Summary: TAS from Reactome - GSK3 phosphorylation of beta-catenin at Thr41.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195300 |
ACCEPT |
Summary: TAS from Reactome - GSK3 phosphorylation of beta-catenin at Ser33.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195304 |
ACCEPT |
Summary: TAS from Reactome - Association of beta-catenin with destruction complex.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195318 |
ACCEPT |
Summary: TAS from Reactome - CK1alpha phosphorylation of beta-catenin at Ser45.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2130279 |
ACCEPT |
Summary: TAS from Reactome - Beta-catenin association with SCF(beta-TrCP) complex.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2130282 |
ACCEPT |
Summary: TAS from Reactome - Degradation of ubiquitinated beta-catenin.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2130286 |
ACCEPT |
Summary: TAS from Reactome - Multi-ubiquitination of phospho-beta-catenin.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5229343 |
ACCEPT |
Summary: TAS from Reactome - AXIN phosphorylation in destruction complex.
Reason: Cytosolic destruction complex function.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5339713 |
ACCEPT |
Summary: TAS from Reactome - Misspliced GSK3beta mutants stabilize beta-catenin.
Reason: Cytosolic context for Wnt signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:21087614 Critical scaffolding regions of the tumor suppressor Axin1 a... |
ACCEPT |
Summary: Study of natively unfolded scaffolding regions of AXIN1; interaction with GSK3B demonstrated.
Reason: Structural characterization of AXIN1 interactions.
Supporting Evidence:
PMID:21087614
2010 Nov 16. Critical scaffolding regions of the tumor suppressor Axin1 are natively unfolded.
|
|
GO:0008013
beta-catenin binding
|
IPI
PMID:21087614 Critical scaffolding regions of the tumor suppressor Axin1 a... |
ACCEPT |
Summary: AXIN1-beta-catenin interaction demonstrated in structural study.
Reason: Core function.
Supporting Evidence:
PMID:21087614
2010 Nov 16. Critical scaffolding regions of the tumor suppressor Axin1 are natively unfolded.
|
|
GO:0060090
molecular adaptor activity
|
IDA
PMID:21087614 Critical scaffolding regions of the tumor suppressor Axin1 a... |
ACCEPT |
Summary: IDA evidence for adaptor activity from structural study of AXIN1 scaffolding regions.
Reason: Core function.
Supporting Evidence:
PMID:21087614
2010 Nov 16. Critical scaffolding regions of the tumor suppressor Axin1 are natively unfolded.
|
|
GO:0005515
protein binding
|
IPI
PMID:28546513 The SIAH E3 ubiquitin ligases promote Wnt/β-catenin signalin... |
ACCEPT |
Summary: SIAH E3 ligases promote Wnt signaling by mediating AXIN1 degradation; AXIN1-SIAH1/SIAH2 interactions.
Reason: Novel E3 ligase interaction regulating AXIN1 turnover.
Supporting Evidence:
PMID:28546513
May 25. The SIAH E3 ubiquitin ligases promote Wnt/β-catenin signaling through mediating Wnt-induced Axin degradation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4839734 |
ACCEPT |
Summary: TAS from Reactome - AXIN mutants destabilize destruction complex.
Reason: Cytosolic context.
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IC
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: Inferred from Curator based on beta-catenin destruction complex membership.
Reason: Core function, logically inferred from scaffold role in destruction complex.
Supporting Evidence:
PMID:9601641
Axin acts as a scaffold upon which APC, beta-catenin and GSK3 beta assemble to coordinate the regulation of beta-catenin signaling
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IDA
PMID:10644691 Protein phosphatase 2Calpha dephosphorylates axin and activa... |
ACCEPT |
Summary: IDA evidence showing AXIN1-mediated repression of LEF-1-dependent transcription.
Reason: Core function directly demonstrated.
Supporting Evidence:
PMID:10644691
PP2C expression relieves Axin-mediated repression of LEF-1-dependent transcription
|
|
GO:0005515
protein binding
|
IPI
PMID:28829046 Twa1/Gid8 is a β-catenin nuclear retention factor in Wnt sig... |
ACCEPT |
Summary: GID8 is a beta-catenin nuclear retention factor; AXIN1 interactions with GID8, GSK3B, and beta-catenin.
Reason: Novel interactor GID8 characterized.
Supporting Evidence:
PMID:28829046
Twa1/Gid8 is a β-catenin nuclear retention factor in Wnt signaling and colorectal tumorigenesis.
|
|
GO:0035591
signaling adaptor activity
|
TAS
PMID:21799911 Ubiquitin ligase RNF146 regulates tankyrase and Axin to prom... |
ACCEPT |
Summary: TAS from review of RNF146 regulation of tankyrase and AXIN1.
Reason: Core function.
Supporting Evidence:
PMID:21799911
Ubiquitin ligase RNF146 regulates tankyrase and Axin to promote Wnt signaling.
|
|
GO:0060090
molecular adaptor activity
|
IDA
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: Foundational paper demonstrating AXIN1 as scaffold for the destruction complex.
Reason: Core function directly demonstrated.
Supporting Evidence:
PMID:9601641
Axin acts as a scaffold upon which APC, beta-catenin and GSK3 beta assemble
|
|
GO:0005515
protein binding
|
IPI
PMID:27484798 The A-Kinase Anchoring Protein (AKAP) Glycogen Synthase Kina... |
ACCEPT |
Summary: GSKIP regulates beta-catenin through interactions with PKA and GSK3B; AXIN1-GSK3B context.
Reason: Destruction complex interactions.
Supporting Evidence:
PMID:27484798
2016 Aug 2. The A-Kinase Anchoring Protein (AKAP) Glycogen Synthase Kinase 3β Interaction Protein (GSKIP) Regulates β-Catenin through Its Interactions with Both Protein Kinase A (PKA) and GSK3β.
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IMP
PMID:22899650 LRRK2 functions as a Wnt signaling scaffold, bridging cytoso... |
ACCEPT |
Summary: LRRK2 functions as Wnt signaling scaffold bridging cytosolic proteins and LRP6; AXIN1 role in Wnt suppression demonstrated by loss-of-function.
Reason: Core function demonstrated by mutant phenotype.
Supporting Evidence:
PMID:22899650
Aug 16. LRRK2 functions as a Wnt signaling scaffold, bridging cytosolic proteins and membrane-localized LRP6.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4641129 |
ACCEPT |
Summary: TAS from Reactome - AXIN ubiquitination by SMURF2.
Reason: Cytosolic context for AXIN1 regulation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4641256 |
ACCEPT |
Summary: TAS from Reactome - Ubiquitinated AXIN degradation.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640861 |
ACCEPT |
Summary: TAS from Reactome - RNF146 ubiquitinates ADP-ribosylated AXIN.
Reason: Cytosolic context for AXIN1 regulation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640872 |
ACCEPT |
Summary: TAS from Reactome - USP34 deubiquitinates AXIN1/AXIN2.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640874 |
ACCEPT |
Summary: TAS from Reactome - Ub-RibC-AXIN degradation by proteasome.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640844 |
ACCEPT |
Summary: TAS from Reactome - RNF146 binds RibC-AXIN:TNKS complex.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640858 |
ACCEPT |
Summary: TAS from Reactome - Tankyrase ADP-ribosylates AXIN.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1504186 |
ACCEPT |
Summary: TAS from Reactome - DVL recruits GSK3beta:AXIN1 to receptor complex.
Reason: Cytosolic context for Wnt signaling.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-195251 |
ACCEPT |
Summary: TAS from Reactome - Assembly of the destruction complex.
Reason: Cytosolic localization for destruction complex assembly.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-201677 |
ACCEPT |
Summary: TAS from Reactome - Phosphorylation of LRP5/6 cytoplasmic domain.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-201685 |
ACCEPT |
Summary: TAS from Reactome - Beta-catenin release from destruction complex.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640862 |
ACCEPT |
Summary: TAS from Reactome - Tankyrase binds AXIN.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4641134 |
ACCEPT |
Summary: TAS from Reactome - SMURF2 binds AXIN.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4791278 |
ACCEPT |
Summary: TAS from Reactome - APC truncation mutants have impaired AXIN binding.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4827388 |
ACCEPT |
Summary: TAS from Reactome - CTNNB1 S45 mutants not phosphorylated by CK1alpha.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4839634 |
ACCEPT |
Summary: TAS from Reactome - CTNNB1 S33 mutants not phosphorylated by GSK3beta.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4839635 |
ACCEPT |
Summary: TAS from Reactome - CTNNB1 S37 mutants not phosphorylated by GSK3beta.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4839638 |
ACCEPT |
Summary: TAS from Reactome - CTNNB1 T41 mutants not phosphorylated by GSK3beta.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4839746 |
ACCEPT |
Summary: TAS from Reactome - Truncated AMER1 mutants destabilize destruction complex.
Reason: Cytosolic context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5251555 |
ACCEPT |
Summary: TAS from Reactome - Expression of AXIN1 gene.
Reason: Gene expression context for cytosolic protein.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5368596 |
ACCEPT |
Summary: TAS from Reactome - WNT3A stimulates caveolin-dependent internalization.
Reason: Cytosolic context for Wnt signaling.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8932076 |
ACCEPT |
Summary: TAS from Reactome - AXIN1 gene expression regulated by ESR1 and RUNX1.
Reason: Gene expression context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-1458902 |
ACCEPT |
Summary: TAS from Reactome - CK1gamma phosphorylates LRP5/6 (frog model).
Reason: Cytosolic context.
|
|
GO:0005515
protein binding
|
IPI
PMID:12192039 I-mfa domain proteins interact with Axin and affect its regu... |
ACCEPT |
Summary: I-mfa domain proteins (MDFI, MDFIC) interact with AXIN1 and affect Wnt and JNK signaling.
Reason: Novel interactors affecting AXIN1 function.
Supporting Evidence:
PMID:12192039
I-mfa domain proteins interact with Axin and affect its regulation of the Wnt and c-Jun N-terminal kinase signaling pathways.
|
|
GO:0005634
nucleus
|
IDA
PMID:21383061 The ubiquitin-specific protease USP34 regulates axin stabili... |
ACCEPT |
Summary: USP34 regulates AXIN1 stability; nuclear localization observed.
Reason: Nuclear localization documented.
Supporting Evidence:
PMID:21383061
Mar 7. The ubiquitin-specific protease USP34 regulates axin stability and Wnt/β-catenin signaling.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:21383061 The ubiquitin-specific protease USP34 regulates axin stabili... |
ACCEPT |
Summary: Cytoplasmic localization observed in USP34-AXIN1 study.
Reason: Primary localization.
Supporting Evidence:
PMID:21383061
Mar 7. The ubiquitin-specific protease USP34 regulates axin stability and Wnt/β-catenin signaling.
|
|
GO:0019899
enzyme binding
|
IPI
PMID:19759537 Tankyrase inhibition stabilizes axin and antagonizes Wnt sig... |
ACCEPT |
Summary: AXIN1 binds tankyrase (TNKS/TNKS2) enzymes.
Reason: Important for AXIN1 regulation.
Supporting Evidence:
PMID:19759537
Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling.
|
|
GO:0019899
enzyme binding
|
IPI
PMID:21383061 The ubiquitin-specific protease USP34 regulates axin stabili... |
ACCEPT |
Summary: AXIN1 binds USP34 deubiquitinase.
Reason: Important for AXIN1 stability regulation.
Supporting Evidence:
PMID:21383061
Mar 7. The ubiquitin-specific protease USP34 regulates axin stability and Wnt/β-catenin signaling.
|
|
GO:0019899
enzyme binding
|
IPI
PMID:21478859 RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulat... |
ACCEPT |
Summary: AXIN1 binds RNF146 E3 ligase and tankyrase.
Reason: Important for AXIN1 regulation.
Supporting Evidence:
PMID:21478859
RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulates axin degradation and Wnt signalling.
|
|
GO:0031625
ubiquitin protein ligase binding
|
IPI
PMID:21478859 RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulat... |
ACCEPT |
Summary: AXIN1 binds RNF146 E3 ubiquitin ligase.
Reason: Important for AXIN1 turnover regulation.
Supporting Evidence:
PMID:21478859
RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulates axin degradation and Wnt signalling.
|
|
GO:0048471
perinuclear region of cytoplasm
|
IDA
PMID:19038973 Identification of WNT/beta-CATENIN signaling pathway compone... |
ACCEPT |
Summary: Perinuclear localization observed in human cumulus cells.
Reason: Localization pattern consistent with cytoplasmic function.
Supporting Evidence:
PMID:19038973
Identification of WNT/beta-CATENIN signaling pathway components in human cumulus cells.
|
|
GO:0071944
cell periphery
|
IDA
PMID:19038973 Identification of WNT/beta-CATENIN signaling pathway compone... |
ACCEPT |
Summary: Cell periphery localization observed.
Reason: Consistent with membrane recruitment during Wnt signaling.
Supporting Evidence:
PMID:19038973
Identification of WNT/beta-CATENIN signaling pathway components in human cumulus cells.
|
|
GO:0019901
protein kinase binding
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: ISS from mouse ortholog. AXIN1 binds GSK3B and CK1 kinases.
Reason: Core function.
|
|
GO:2000060
positive regulation of ubiquitin-dependent protein catabolic process
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: ISS from mouse ortholog. AXIN1 promotes beta-catenin ubiquitination and degradation.
Reason: Core function.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:17569865 Wnt induces LRP6 signalosomes. |
ACCEPT |
Summary: Wnt induces LRP6 signalosomes; AXIN1 cytoplasmic localization.
Reason: Primary localization.
Supporting Evidence:
PMID:17569865
Wnt induces LRP6 signalosomes and promotes dishevelled-dependent LRP6 phosphorylation.
|
|
GO:0065003
protein-containing complex assembly
|
IDA
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
ACCEPT |
Summary: AXIN1 promotes assembly of the Smad7-Arkadia complex for TGF-beta signaling.
Reason: AXIN1 scaffolding function in complex assembly.
Supporting Evidence:
PMID:16601693
Axin activates TGF-beta signaling by forming a multimeric complex consisting of Smad7 and ubiquitin E3 ligase Arkadia
|
|
GO:0045732
positive regulation of protein catabolic process
|
IDA
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: AXIN1 promotes beta-catenin degradation.
Reason: Core function.
Supporting Evidence:
PMID:9601641
Overexpression of hAxin strongly promoted the downregulation of wild-type beta-catenin
|
|
GO:0030877
beta-catenin destruction complex
|
IDA
PMID:16188939 The adenomatous polyposis coli protein (APC) exists in two d... |
ACCEPT |
Summary: IDA evidence for destruction complex membership from study of APC complexes.
Reason: Core complex membership.
Supporting Evidence:
PMID:16188939
Sep 27. The adenomatous polyposis coli protein (APC) exists in two distinct soluble complexes with different functions.
|
|
GO:0030877
beta-catenin destruction complex
|
IDA
PMID:19759537 Tankyrase inhibition stabilizes axin and antagonizes Wnt sig... |
ACCEPT |
Summary: Tankyrase inhibition stabilizes AXIN1 in the destruction complex.
Reason: Core complex membership.
Supporting Evidence:
PMID:19759537
Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling.
|
|
GO:0045732
positive regulation of protein catabolic process
|
IC
PMID:16188939 The adenomatous polyposis coli protein (APC) exists in two d... |
ACCEPT |
Summary: Inferred from Curator based on destruction complex function.
Reason: Logical inference from scaffold role.
Supporting Evidence:
PMID:16188939
Sep 27. The adenomatous polyposis coli protein (APC) exists in two distinct soluble complexes with different functions.
|
|
GO:0070411
I-SMAD binding
|
IPI
PMID:16601693 Axin is a scaffold protein in TGF-beta signaling that promot... |
ACCEPT |
Summary: AXIN1 binds SMAD7 in TGF-beta signaling context.
Reason: Experimentally validated.
Supporting Evidence:
PMID:16601693
Axin activates TGF-beta signaling by forming a multimeric complex consisting of Smad7
|
|
GO:0008013
beta-catenin binding
|
IDA
PMID:10644691 Protein phosphatase 2Calpha dephosphorylates axin and activa... |
ACCEPT |
Summary: PP2C dephosphorylates AXIN1; beta-catenin binding context demonstrated.
Reason: Core function.
Supporting Evidence:
PMID:10644691
Protein phosphatase 2Calpha dephosphorylates axin and activates LEF-1-dependent transcription.
|
|
GO:0042802
identical protein binding
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: ISS from mouse ortholog. AXIN1 homodimerizes.
Reason: DIX domain-mediated self-association.
|
|
GO:0070016
armadillo repeat domain binding
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: AXIN1 binds armadillo repeats of beta-catenin.
Reason: Structural basis for beta-catenin interaction.
|
|
GO:0005515
protein binding
|
IPI
PMID:17588722 Htid-1, the human homolog of the Drosophila melanogaster l(2... |
ACCEPT |
Summary: Htid-1 (DNAJA3) interaction with APC; AXIN1 context.
Reason: APC complex interactions.
Supporting Evidence:
PMID:17588722
2007 Jun 2. Htid-1, the human homolog of the Drosophila melanogaster l(2)tid tumor suppressor, defines a novel physiological role of APC.
|
|
GO:0070411
I-SMAD binding
|
IPI
PMID:18593713 Smad7 stabilizes beta-catenin binding to E-cadherin complex ... |
ACCEPT |
Summary: Smad7-AXIN1 interaction in cell adhesion context.
Reason: Validated interaction.
Supporting Evidence:
PMID:18593713
A Smad7-Axin interaction disassociates GSK-3beta and beta-catenin from Axin
|
|
GO:0046332
SMAD binding
|
IPI
PMID:18593713 Smad7 stabilizes beta-catenin binding to E-cadherin complex ... |
ACCEPT |
Summary: AXIN1 binds SMAD7.
Reason: Validated interaction.
Supporting Evidence:
PMID:18593713
2008 Jun 30. Smad7 stabilizes beta-catenin binding to E-cadherin complex and promotes cell-cell adhesion.
|
|
GO:0031410
cytoplasmic vesicle
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: ISS from mouse ortholog.
Reason: Secondary localization, not the primary site of function.
|
|
GO:0042803
protein homodimerization activity
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: ISS from mouse ortholog. DIX domain-mediated homodimerization.
Reason: Well-supported by experimental data.
|
|
GO:0046330
positive regulation of JNK cascade
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: AXIN1 activates JNK signaling independently of Wnt.
Reason: Secondary function of AXIN1 distinct from core Wnt pathway role.
|
|
GO:0005515
protein binding
|
IPI
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: Foundational paper demonstrating AXIN1 interactions with APC, beta-catenin, and GSK3B.
Reason: Multiple core interactions demonstrated.
Supporting Evidence:
PMID:9601641
Human Axin (hAxin) binds directly to beta-catenin, GSK3 beta, and APC in vitro, and the endogenous proteins are found in a complex in cells
|
|
GO:0030877
beta-catenin destruction complex
|
IDA
PMID:9601641 Downregulation of beta-catenin by human Axin and its associa... |
ACCEPT |
Summary: Foundational paper demonstrating AXIN1 as scaffold of the destruction complex.
Reason: Core complex membership demonstrated.
Supporting Evidence:
PMID:9601641
Axin acts as a scaffold upon which APC, beta-catenin and GSK3 beta assemble
|
|
GO:0005634
nucleus
|
IDA
PMID:12072559 Subcellular distribution of Wnt pathway proteins in normal a... |
ACCEPT |
Summary: Nuclear localization observed in colon tissue.
Reason: AXIN1 can localize to nucleus.
Supporting Evidence:
PMID:12072559
Subcellular distribution of Wnt pathway proteins in normal and neoplastic colon.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:12072559 Subcellular distribution of Wnt pathway proteins in normal a... |
ACCEPT |
Summary: Cytoplasmic localization in colon tissue.
Reason: Primary localization.
Supporting Evidence:
PMID:12072559
Subcellular distribution of Wnt pathway proteins in normal and neoplastic colon.
|
|
GO:0016328
lateral plasma membrane
|
IDA
PMID:12072559 Subcellular distribution of Wnt pathway proteins in normal a... |
ACCEPT |
Summary: Lateral plasma membrane localization observed in colon epithelium.
Reason: Tissue-specific membrane localization pattern.
Supporting Evidence:
PMID:12072559
Subcellular distribution of Wnt pathway proteins in normal and neoplastic colon.
|
Q: How does AXIN1 condensate formation (degradasomes) contribute to the efficiency of beta-catenin destruction complex function?
Q: What is the relative contribution of AXIN1 versus AXIN2 to Wnt pathway regulation in different tissue contexts?
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organism: human
gene_id: AXIN1
gene_symbol: AXIN1
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gene_info: Name=AXIN1; Synonyms=AXIN;
organism_full: Homo sapiens (Human).
protein_family: Not specified in UniProt
protein_domains: Axin-like. (IPR043581); Axin_b-cat-bd. (IPR014936); Axin_TNKS-bd.
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BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'AXIN1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene AXIN1 (gene ID: AXIN1, UniProt: O15169) in human.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'AXIN1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene AXIN1 (gene ID: AXIN1, UniProt: O15169) in human.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Research report: Human AXIN1 (UniProt O15169)
Verification of target identity and domains
- Identity and organism: The report focuses on human AXIN1 (Axis inhibition protein 1; Axin-1), a scaffold protein essential to canonical Wnt/β-catenin signaling. Contemporary functional and structural literature consistently describes human AXIN1 with the domain organization expected from UniProt: an N‑terminal β‑catenin-binding region, a GSK3β-binding helix, a central RGS/APC-binding region, a tankyrase-binding region, and a C‑terminal DIX domain that mediates polymerization/condensate formation (consistent with DIX/IPR001158; Axin_TNKS-bd/IPR032101; Axin_b-cat-bd/IPR014936). Domain mapping and functional tests in human cells are detailed in 2024 Cancer Research by Zhang et al. (https://doi.org/10.1158/0008-5472.CAN-23-2268, May 1, 2024), which experimentally delineates these regions (tankyrase, RGS/APC, MEKK1, GSK3β, β‑catenin, CK1, PP2A, DIX) and their roles (zhang2024analysisoftumorassociated pages 9-10, zhang2024analysisoftumorassociated pages 10-11).
Key concepts and definitions (current understanding)
- Primary role: AXIN1 is the core cytosolic scaffold of the β‑catenin destruction complex (DC), coordinating CK1 and GSK3β phosphorylation of β‑catenin and recruiting APC to promote β‑catenin ubiquitination and degradation, thereby restraining Wnt/β‑catenin signaling (zhang2024analysisoftumorassociated pages 16-17, zhang2024analysisoftumorassociated pages 9-10). Key binding interfaces include: (i) a GSK3β-binding α‑helix (P385–E421; helix visible as E384–V399 in AXIN1–GSK3β structure) whose integrity is required for β‑catenin regulation (zhang2024analysisoftumorassociated pages 5-6); (ii) a β‑catenin-binding region; (iii) the RGS/APC interaction domain; and (iv) the C‑terminal DIX domain that supports polymerization/degradasome formation (zhang2024analysisoftumorassociated pages 10-11, zhang2024analysisoftumorassociated pages 9-10).
- Material state/condensates: AXIN1 self-assembles into cytoplasmic “degradasomes” or puncta via its DIX domain; these assemblies function as biomolecular condensates for β‑catenin turnover and are observed as cytoplasmic puncta in cells (zhang2024analysisoftumorassociated pages 6-7). Reviews of β‑catenin regulation recognize AXIN1/APC scaffolding and condensate-like assemblies of the destruction complex (wal2020walkingthetight pages 6-7).
Cellular localization and context of action
- Predominantly cytosolic; forms cytoplasmic puncta/condensates (“degradasomes”) where destruction-complex catalysis occurs (zhang2024analysisoftumorassociated pages 6-7, wal2020walkingthetight pages 6-7). Wnt receptor signalosome dynamics at the plasma membrane are organized at submicron clusters, with cytosolic scaffolds (including DIX-domain proteins) participating downstream; recent single-molecule rbTALM imaging demonstrates long-lived co-clustering of Wnt co-receptors LRP6 and FZD, providing nanoscale spatiotemporal context for upstream assembly prior to AXIN1 recruitment (bioRxiv, June 22, 2024; https://doi.org/10.1101/2024.06.18.599024) (philippi2024longtermsinglemolecule pages 31-35).
Pathways and precise mechanistic role
- Canonical Wnt/β‑catenin: In the absence of Wnt, AXIN1 scaffolds CK1 and GSK3β to phosphorylate β‑catenin, promotes β‑catenin binding to β‑TrCP, and enables proteasomal degradation. Loss of AXIN1 function elevates β‑catenin signaling (zhang2024analysisoftumorassociated pages 16-17, zhang2024analysisoftumorassociated pages 10-11). The GSK3β-binding helix (V383–T402 region) is a critical determinant; tumor-associated missense mutations or deletions in this helix impair GSK3β binding and increase β‑catenin reporter activity (zhang2024analysisoftumorassociated pages 5-6). The DIX domain supports higher-order assembly essential for efficient β‑catenin turnover (zhang2024analysisoftumorassociated pages 10-11, wal2020walkingthetight pages 6-7).
- Crosstalk: AXIN1’s regulation by tankyrase and RNF146 links PARylation and ubiquitination pathways to Wnt output (see regulation below). Reviews synthesize the dual pools of β‑catenin (adhesive and signaling) and the AXIN/APC scaffolding that balances them (Open Biology, 2020; https://doi.org/10.1098/rsob.200267) (wal2020walkingthetight pages 6-7).
Molecular regulation of AXIN1
- Tankyrase-mediated PARylation and RNF146-dependent ubiquitination: Tankyrase PARP enzymes (TNKS1/2; PARP5a/b) PARylate AXIN1, which is recognized by the WWE domain of the E3 ligase RNF146, triggering AXIN1 ubiquitination and proteasomal degradation; this axis activates Wnt signaling by reducing AXIN1 levels. A 2024 ACS Chemical Biology study developed a fluorescence polarization assay to discover RNF146 WWE inhibitors, summarizing the tankyrase–RNF146–AXIN1 axis and providing the structural basis (RNF146 WWE–isoADPr PDB 3V3L) (published Jan 18, 2024; https://doi.org/10.1021/acschembio.3c00512) (peng2024isoadpribosefluorescencepolarization pages 1-2).
- Phosphorylation in condensates counteracts degradation: In human cells, CK1α phosphorylation of an N‑terminal CK1 consensus motif within the tankyrase-binding region of AXIN1, enriched within Axin condensates, electrostatically/sterically hinders tankyrase binding and opposes tankyrase-mediated AXIN1 degradation; PP1 antagonizes this phosphorylation. This establishes a condensate-localized CK1α–PP1 rheostat that stabilizes AXIN1 and restrains Wnt signaling (Journal of Cell Science, Oct 2023; https://doi.org/10.1242/jcs.261214) (klement2023phosphorylationofaxin pages 8-11).
- SUMOylation of RNF146 modulates AXIN1 turnover: In hepatocellular carcinoma (HCC), RNF146 is SUMOylated (major sites K19, K61, K174, K175), with PIAS3/SENP1 acting at K19/K175 to promote nuclear localization and increase association with AXIN1, accelerating AXIN1 ubiquitination and Wnt activation; genetic or pharmacologic inhibition of RNF146 SUMOylation decreases HCC progression in vitro/in vivo (Oncogene, Apr 2023; https://doi.org/10.1038/s41388-023-02689-4) (li2023sumoylationofrnf146 pages 18-22).
- Tankyrase inhibition vs degradation (emerging concept): A 2025 mechanistic preprint argues that catalytic tankyrase inhibitors stabilize AXIN but also accumulate TNKS scaffolds that induce large AXIN puncta and “rigidify” the DC, limiting β‑catenin turnover; targeted degradation of TNKS (e.g., IWR1-POMA) stabilizes AXIN without excess puncta and yields stronger Wnt suppression in APC-mutant CRC cells, highlighting non-catalytic TNKS scaffolding roles (bioRxiv, Sep 22, 2025; https://doi.org/10.1101/2025.09.22.677768) (wang2025roleoftankyrase pages 4-7).
Recent developments and latest research (2023–2024 priority)
- Functional annotation of AXIN1 variants (2024): Systematic testing of 80 tumor-associated missense variants defined domain vulnerabilities. Removing GSK3β- and β‑catenin-binding domains produced the largest signaling defects, followed by precise removal of the RGS/APC domain. Eighteen missense variants were functionally defective in β‑catenin regulation; truncation length inversely correlated with residual function. Liver cancers carrying AXIN1 missense variants frequently co-occurred with high-activity β‑catenin mutations (5/15, 33.3%) versus 1/49 among truncating AXIN1 cases (P = 0.0139), supporting that many AXIN1 missense variants are passengers, while truncations are stronger drivers (Cancer Research, 2024; https://doi.org/10.1158/0008-5472.CAN-23-2268) (zhang2024analysisoftumorassociated pages 10-11, zhang2024analysisoftumorassociated pages 9-10).
- High-resolution mapping of the GSK3β-binding helix (2024): Variants/deletions within V383–T402 disrupt binding to GSK3β and increase β‑catenin reporter activity; structural modeling aligns an α‑helix (P385–E421) that packs against GSK3β, with R395 participating in a stabilizing salt bridge (zhang2024analysisoftumorassociated pages 5-6). These data sharpen the mechanistic definition of AXIN1’s catalytic scaffold element essential for DC function (Cancer Research, 2024) (zhang2024analysisoftumorassociated pages 5-6).
- Condensate-centered regulation (2023): CK1α phosphorylation within condensates reduces TNKS interaction and AXIN1 degradation, refining the view of condensate-localized post-translational control (J Cell Sci, 2023) (klement2023phosphorylationofaxin pages 8-11).
- Nanoscale receptor signalosomes (2024): rbTALM single-molecule localization microscopy shows cooperative, long-lived LRP6/FZD clustering in live cells upon Wnt, contextualizing AXIN1 recruitment downstream of membrane assemblies (bioRxiv, 2024; https://doi.org/10.1101/2024.06.18.599024) (philippi2024longtermsinglemolecule pages 31-35).
- Therapeutic toolmaking (2024): First high-throughput fluorescence polarization assay for RNF146 WWE inhibitors (TAMRA-isoADPr tracer) enables discovery of small molecules that could stabilize AXIN1 by blocking PAR-recognition (ACS Chem Biol, 2024) (peng2024isoadpribosefluorescencepolarization pages 1-2).
Current applications and real-world implementations
- Oncology genomics: In a 111-patient HCC cohort (China) sequenced with 508/688-gene panels, AXIN1 mutations were detected in 14.41% (16/111), contributing to frequent Wnt pathway activation; the study linked mutational profiles to prognosis and identified that ~50% of patients harbored clinically actionable mutations guiding therapy/trials (BMC Cancer, June 2024; https://doi.org/10.1186/s12885-024-12407-2) (song2024genomicprofilinginforms pages 3-7).
- Pharmacologic targeting of the AXIN1 axis:
- Tankyrase catalytic inhibitors (e.g., IWR compounds) stabilize AXIN1 but face safety and efficacy concerns; mechanistic updates suggest TNKS degraders may better suppress Wnt signaling by eliminating non-catalytic scaffolding (bioRxiv, 2025) (wang2025roleoftankyrase pages 4-7).
- RNF146 WWE inhibition: the 2024 FP assay opens a route to small-molecule RNF146 WWE inhibitors, a strategy expected to phenocopy AXIN stabilization with potential to avoid tankyrase-related toxicities (ACS Chem Biol, 2024) (peng2024isoadpribosefluorescencepolarization pages 1-2).
- Regulatory biology informing interventions: CK1α-driven protection of AXIN1 from TNKS in condensates suggests that modulating CK1/PP1 activities or condensate composition could tune AXIN1 stability and Wnt output (J Cell Sci, 2023) (klement2023phosphorylationofaxin pages 8-11).
Expert opinions and perspectives
- A synthesis from Open Biology (2020) emphasizes AXIN1–APC scaffolding at the core of the DC and notes evidence for liquid–liquid phase separation (“AXIN degradosome”) contributing to β‑catenin regulation, integrating biochemical and biophysical models of β‑catenin pools (https://doi.org/10.1098/rsob.200267) (wal2020walkingthetight pages 6-7).
- The 2024 functional genomics study provides an authorial perspective that most AXIN1 truncations are (partial) loss-of-function drivers in β‑catenin–active tumors, whereas most missense variants are likely passengers unless they map to critical binding interfaces; clinical co-mutation patterns in liver and colorectal cancers support this view (Cancer Research, 2024) (zhang2024analysisoftumorassociated pages 10-11).
Relevant quantitative statistics and data (recent)
- Domain-function correlations (2024): Deleting GSK3β- and β‑catenin-binding domains produced the largest increases in β‑catenin reporter activity; 18/80 (22.5%) missense variants tested were defective; truncation length inversely correlated with residual function (Cancer Research, 2024) (zhang2024analysisoftumorassociated pages 10-11).
- Liver cancer co-mutation patterns (2024): In liver tumors, 33.3% (5/15) of cases with AXIN1 missense variants harbored high-activity β‑catenin mutations versus 6.1% (3/49; including two AXIN2 truncations) among tumors with truncating AXIN1 mutations (Fisher’s exact P = 0.0139) (Cancer Research, 2024) (zhang2024analysisoftumorassociated pages 10-11).
- HCC cohort prevalence (2024): AXIN1 mutated in 14.41% (16/111) of sequenced patients; Wnt/β‑catenin pathway aberrant in ~50% of cases (BMC Cancer, 2024) (song2024genomicprofilinginforms pages 3-7).
Conclusions
Human AXIN1 (O15169) is a multidomain, intrinsically disordered scaffold that nucleates the β‑catenin destruction complex via defined interfaces for GSK3β, β‑catenin, APC, and DIX-mediated assembly. Its function is dynamically regulated by tankyrase-mediated PARylation leading to RNF146-dependent ubiquitination, CK1α phosphorylation that shields the TNKS-binding region within condensates, and by condensate assembly itself. Recent work (2023–2024) refined domain-level mechanisms (especially the GSK3β-binding helix), functionally annotated disease variants, quantified co-mutation patterns in HCC and CRC, and enabled new therapeutic strategies via RNF146 WWE assays and emerging tankyrase degraders. Together, these data provide a precise, experimentally grounded functional annotation of AXIN1 with direct translational implications in Wnt-driven diseases and oncology (zhang2024analysisoftumorassociated pages 5-6, zhang2024analysisoftumorassociated pages 10-11, zhang2024analysisoftumorassociated pages 6-7, wal2020walkingthetight pages 6-7, peng2024isoadpribosefluorescencepolarization pages 1-2, klement2023phosphorylationofaxin pages 8-11, li2023sumoylationofrnf146 pages 18-22, wang2025roleoftankyrase pages 4-7, song2024genomicprofilinginforms pages 3-7).
References
(zhang2024analysisoftumorassociated pages 9-10): Ruyi Zhang, Shanshan Li, Kelly Schippers, Yunlong Li, Boaz Eimers, Marla Lavrijsen, Ling Wang, Guofei Cui, Xin Chen, Maikel P. Peppelenbosch, Joyce H.G. Lebbink, and Ron Smits. Analysis of tumor-associated axin1 missense mutations identifies variants that activate β-catenin signaling. Cancer research, 84:1443-1459, Feb 2024. URL: https://doi.org/10.1158/0008-5472.can-23-2268, doi:10.1158/0008-5472.can-23-2268. This article has 14 citations and is from a highest quality peer-reviewed journal.
(zhang2024analysisoftumorassociated pages 10-11): Ruyi Zhang, Shanshan Li, Kelly Schippers, Yunlong Li, Boaz Eimers, Marla Lavrijsen, Ling Wang, Guofei Cui, Xin Chen, Maikel P. Peppelenbosch, Joyce H.G. Lebbink, and Ron Smits. Analysis of tumor-associated axin1 missense mutations identifies variants that activate β-catenin signaling. Cancer research, 84:1443-1459, Feb 2024. URL: https://doi.org/10.1158/0008-5472.can-23-2268, doi:10.1158/0008-5472.can-23-2268. This article has 14 citations and is from a highest quality peer-reviewed journal.
(zhang2024analysisoftumorassociated pages 16-17): Ruyi Zhang, Shanshan Li, Kelly Schippers, Yunlong Li, Boaz Eimers, Marla Lavrijsen, Ling Wang, Guofei Cui, Xin Chen, Maikel P. Peppelenbosch, Joyce H.G. Lebbink, and Ron Smits. Analysis of tumor-associated axin1 missense mutations identifies variants that activate β-catenin signaling. Cancer research, 84:1443-1459, Feb 2024. URL: https://doi.org/10.1158/0008-5472.can-23-2268, doi:10.1158/0008-5472.can-23-2268. This article has 14 citations and is from a highest quality peer-reviewed journal.
(zhang2024analysisoftumorassociated pages 5-6): Ruyi Zhang, Shanshan Li, Kelly Schippers, Yunlong Li, Boaz Eimers, Marla Lavrijsen, Ling Wang, Guofei Cui, Xin Chen, Maikel P. Peppelenbosch, Joyce H.G. Lebbink, and Ron Smits. Analysis of tumor-associated axin1 missense mutations identifies variants that activate β-catenin signaling. Cancer research, 84:1443-1459, Feb 2024. URL: https://doi.org/10.1158/0008-5472.can-23-2268, doi:10.1158/0008-5472.can-23-2268. This article has 14 citations and is from a highest quality peer-reviewed journal.
(zhang2024analysisoftumorassociated pages 6-7): Ruyi Zhang, Shanshan Li, Kelly Schippers, Yunlong Li, Boaz Eimers, Marla Lavrijsen, Ling Wang, Guofei Cui, Xin Chen, Maikel P. Peppelenbosch, Joyce H.G. Lebbink, and Ron Smits. Analysis of tumor-associated axin1 missense mutations identifies variants that activate β-catenin signaling. Cancer research, 84:1443-1459, Feb 2024. URL: https://doi.org/10.1158/0008-5472.can-23-2268, doi:10.1158/0008-5472.can-23-2268. This article has 14 citations and is from a highest quality peer-reviewed journal.
(wal2020walkingthetight pages 6-7): Tanne van der Wal and Renée van Amerongen. Walking the tight wire between cell adhesion and wnt signalling: a balancing act for β-catenin. Open Biology, Dec 2020. URL: https://doi.org/10.1098/rsob.200267, doi:10.1098/rsob.200267. This article has 116 citations and is from a peer-reviewed journal.
(philippi2024longtermsinglemolecule pages 31-35): Michael Philippi, Julia Dohle, Isabelle Watrinet, Michael Holtmannspötter, Jinye Li, Oliver Birkholz, Yi Miao, Ulrich Rothbauer, K. Christopher Garcia, Rainer Kurre, Jacob Piehler, and Changjiang You. Long-term single molecule localization microscopy uncovers dynamic co-assembly of lrp6 and ror2 into wnt-signalosomes. bioRxiv, Jun 2024. URL: https://doi.org/10.1101/2024.06.18.599024, doi:10.1101/2024.06.18.599024. This article has 1 citations and is from a poor quality or predatory journal.
(peng2024isoadpribosefluorescencepolarization pages 1-2): Kewen Peng, Ananya Anmangandla, Sadhan Jana, Yizhen Jin, and Hening Lin. Iso-adp-ribose fluorescence polarization probe for the screening of rnf146 wwe domain inhibitors. ACS Chemical Biology, 19:300-307, Jan 2024. URL: https://doi.org/10.1021/acschembio.3c00512, doi:10.1021/acschembio.3c00512. This article has 2 citations and is from a domain leading peer-reviewed journal.
(klement2023phosphorylationofaxin pages 8-11): Katharina Klement, Martina Brückner, and Dominic B. Bernkopf. Phosphorylation of axin within biomolecular condensates counteracts its tankyrase-mediated degradation. Journal of Cell Science, Oct 2023. URL: https://doi.org/10.1242/jcs.261214, doi:10.1242/jcs.261214. This article has 13 citations and is from a domain leading peer-reviewed journal.
(li2023sumoylationofrnf146 pages 18-22): Wenjia Li, Qingfang Han, Yuanxin Zhu, Yingshi Zhou, Jingyuan Zhang, Weijun Wu, Yu Li, Long Liu, Yuntan Qiu, Kaishun Hu, and Dong Yin. Sumoylation of rnf146 results in axin degradation and activation of wnt/β-catenin signaling to promote the progression of hepatocellular carcinoma. Oncogene, 42:1728-1740, Apr 2023. URL: https://doi.org/10.1038/s41388-023-02689-4, doi:10.1038/s41388-023-02689-4. This article has 28 citations and is from a domain leading peer-reviewed journal.
(wang2025roleoftankyrase pages 4-7): Qian Wang, Liping Li, Lin You, Shuai Wang, Lei Han, Bingnan Wang, Liping Yao, Yong Lu, Ilgen Mender, Ann M. Flusche, Chiho Kim, Nageswari Yarravarapu, Andrew Lemoff, Lawrence Lum, Jerry W. Shay, Yonghao Yu, and Chuo Chen. Role of tankyrase scaffolding in the β-catenin destruction complex and wnt signaling. BioRxiv, Sep 2025. URL: https://doi.org/10.1101/2025.09.22.677768, doi:10.1101/2025.09.22.677768. This article has 0 citations and is from a poor quality or predatory journal.
(song2024genomicprofilinginforms pages 3-7): Mengqi Song, Haoyue Cheng, Hao Zou, Kai Ma, Lianfang Lu, Qian Wei, Zejiang Xu, Zirui Tang, Yuanzheng Zhang, Yinan Wang, and Chuandong Sun. Genomic profiling informs therapies and prognosis for patients with hepatocellular carcinoma in clinical practice. BMC Cancer, Jun 2024. URL: https://doi.org/10.1186/s12885-024-12407-2, doi:10.1186/s12885-024-12407-2. This article has 7 citations and is from a peer-reviewed journal.
id: O15169
gene_symbol: AXIN1
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
AXIN1 (Axis inhibition protein 1) is a cytosolic scaffold protein that serves as
the core
component of the beta-catenin destruction complex, which also includes APC, GSK3B,
and CK1.
AXIN1 coordinates the phosphorylation and subsequent ubiquitination of beta-catenin,
thereby
negatively regulating the canonical Wnt signaling pathway. Key functional domains
include:
an N-terminal tankyrase-binding motif, an RGS domain for APC binding, a GSK3B-binding
helix
(aa 383-400), a beta-catenin binding region, and a C-terminal DIX domain that mediates
polymerization and formation of cytoplasmic condensates ("degradasomes"). AXIN1
is regulated
by tankyrase-mediated ADP-ribosylation followed by RNF146-dependent ubiquitination
and
degradation. Loss-of-function mutations in AXIN1 are associated with hepatocellular
carcinoma
due to aberrant Wnt pathway activation. AXIN1 also has secondary roles in TGF-beta
signaling
(promoting Smad7 degradation via Arkadia) and JNK signaling, and participates in
the AXIN1-HIPK2-TP53
complex upon UV irradiation.
existing_annotations:
- term:
id: GO:0060090
label: molecular adaptor activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 functions as a molecular adaptor/scaffold by bringing together components
of the
beta-catenin destruction complex (GSK3B, APC, CK1, beta-catenin). This adaptor
function
is directly demonstrated in PMID:9601641 and is the core function of AXIN1.
action: ACCEPT
reason: >-
IBA annotation is well-supported. AXIN1 is defined as a scaffold protein that
coordinates
assembly of the destruction complex [PMID:9601641]. Multiple experimental
studies confirm
this adaptor function.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble to coordinate the regulation of beta-catenin signaling."
- reference_id: file:human/AXIN1/AXIN1-deep-research-falcon.md
supporting_text: 'model: Edison Scientific Literature'
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 binds to protein kinases GSK3B (through a defined alpha-helix at aa
383-400) and
CK1, which are essential for its function in the destruction complex.
action: ACCEPT
reason: >-
AXIN1 directly binds GSK3B and CK1 kinases as part of its scaffold function.
The GSK3B-binding
helix is structurally characterized [PDB:1O9U]. This is a core function.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Human Axin (hAxin) binds directly to beta-catenin, GSK3
beta, and APC in vitro, and the endogenous proteins are found in a complex
in cells."
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Negative regulation of canonical Wnt signaling is THE core function of AXIN1.
By scaffolding
the destruction complex, AXIN1 promotes beta-catenin phosphorylation and degradation,
thereby restraining Wnt target gene transcription.
action: ACCEPT
reason: >-
This is the primary biological function of AXIN1, extensively documented in
the literature
and supported by genetic and biochemical evidence. Loss of AXIN1 function
leads to elevated
beta-catenin and Wnt pathway activation.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Overexpression of hAxin strongly promoted the downregulation
of wild-type beta-catenin in colon cancer cells"
- reference_id: PMID:10644691
supporting_text: "PP2C expression relieves Axin-mediated repression of LEF-1-dependent
transcription"
- term:
id: GO:0005634
label: nucleus
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 is predominantly cytoplasmic but can translocate to the nucleus under
specific
conditions such as UV irradiation (where it colocalizes with DAXX in the AXIN1-HIPK2-TP53
complex).
action: ACCEPT
reason: >-
Nuclear localization is documented experimentally [PMID:12072559, PMID:21383061].
While
not the primary site of AXIN1 function, it represents a real localization
pattern.
supported_by:
- reference_id: PMID:12072559
supporting_text: "Subcellular distribution of Wnt pathway proteins in normal
and neoplastic colon"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 can localize to the plasma membrane, particularly during Wnt signaling
when it is
recruited to LRP5/6 receptors. Membrane localization is regulated by MACF1.
action: ACCEPT
reason: >-
Plasma membrane localization is consistent with AXIN1's role in Wnt signalosome
assembly
and its interaction with LRP5/6 co-receptors upon Wnt stimulation. Documented
by
immunohistochemistry in PMID:12072559.
- term:
id: GO:0008013
label: beta-catenin binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 directly binds beta-catenin through a defined binding region (aa 434-502).
This
interaction is essential for AXIN1's function in promoting beta-catenin phosphorylation
and degradation.
action: ACCEPT
reason: >-
Beta-catenin binding is a core molecular function of AXIN1, well-documented
experimentally.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Human Axin (hAxin) binds directly to beta-catenin, GSK3
beta, and APC in vitro"
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 is a core component of the beta-catenin destruction complex. It serves
as the
central scaffold that brings together APC, GSK3B, CK1, and beta-catenin.
action: ACCEPT
reason: >-
Membership in the beta-catenin destruction complex is THE defining characteristic
of
AXIN1 function. This is extensively documented in the literature.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble"
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 binds to E3 ubiquitin ligases including RNF111 (Arkadia) and RNF146.
The RNF111
interaction promotes Smad7 degradation. RNF146 binding leads to AXIN1 ubiquitination
following ADP-ribosylation by tankyrase.
action: ACCEPT
reason: >-
Ubiquitin ligase binding is functionally important for both AXIN1's role in
promoting
Smad7 degradation and for AXIN1's own regulation via the tankyrase-RNF146
axis.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin activates TGF-beta signaling by forming a multimeric
complex consisting of Smad7 and ubiquitin E3 ligase Arkadia"
- term:
id: GO:0032436
label: positive regulation of proteasomal ubiquitin-dependent protein
catabolic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 promotes the proteasomal degradation of beta-catenin by facilitating
its
phosphorylation, which leads to recognition by beta-TrCP E3 ligase and ubiquitination.
action: ACCEPT
reason: >-
This accurately describes AXIN1's downstream effect on beta-catenin, which
is targeted
for proteasomal degradation after being phosphorylated by the destruction
complex.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Overexpression of hAxin strongly promoted the downregulation
of wild-type beta-catenin"
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 self-associates (homodimerizes) through its DIX domain. This polymerization
is
important for formation of cytoplasmic condensates/degradasomes.
action: ACCEPT
reason: >-
AXIN1 homodimerization/polymerization via the DIX domain is well-documented
and
functionally important for destruction complex assembly and condensate formation.
supported_by:
- reference_id: PMID:10811618
supporting_text: "Structural basis of the Axin-adenomatous polyposis coli
interaction"
- term:
id: GO:0048468
label: cell development
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1's role in Wnt signaling regulation impacts cell development processes.
Wnt
signaling is a major developmental pathway.
action: KEEP_AS_NON_CORE
reason: >-
While AXIN1 clearly affects developmental processes through Wnt pathway regulation,
"cell development" is a broad pleiotropic outcome rather than a direct molecular
function.
The core function is Wnt pathway regulation; developmental effects are downstream.
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
AXIN1 binds to inhibitory SMADs including SMAD7. This interaction promotes
Smad7
degradation via Arkadia (RNF111) and enhances TGF-beta signaling.
action: ACCEPT
reason: >-
I-SMAD (Smad7) binding is experimentally validated [PMID:16601693, PMID:18593713]
and
represents a legitimate secondary function of AXIN1 as a scaffold in TGF-beta
signaling.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin activates TGF-beta signaling by forming a multimeric
complex consisting of Smad7 and ubiquitin E3 ligase Arkadia"
- reference_id: PMID:18593713
supporting_text: "A Smad7-Axin interaction disassociates GSK-3beta and beta-catenin
from Axin"
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
IEA annotation from UniProt subcellular location mapping. Nuclear localization
has
experimental support.
action: ACCEPT
reason: >-
Consistent with IBA annotation above and IDA evidence from PMID:12072559 and
PMID:21383061.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Cytoplasmic localization is the predominant localization for AXIN1 and the
site of
destruction complex function.
action: ACCEPT
reason: >-
AXIN1 is primarily cytoplasmic where it forms the destruction complex. Well-supported
by multiple experimental studies.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Plasma membrane localization is consistent with AXIN1's recruitment to Wnt
receptors.
action: ACCEPT
reason: >-
Consistent with IBA annotation above and experimental evidence.
- term:
id: GO:0006915
label: apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
This IEA annotation is derived from UniProt keyword KW-0053 (Apoptosis). UniProt
notes
AXIN1 as a "Component of the AXIN1-HIPK2-TP53 complex which controls cell
growth,
apoptosis and development" and that AXIN1 "Facilitates the phosphorylation
of TP53 by
HIPK2 upon ultraviolet irradiation." However, this represents a secondary/pleiotropic
function rather than AXIN1's core function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
AXIN1's core function is as a scaffold in the Wnt/beta-catenin pathway. While
AXIN1
participates in the AXIN1-HIPK2-TP53 complex that can influence apoptosis
upon UV
irradiation, this is a secondary function. The deep research document makes
no mention
of apoptosis as a primary function. Any apoptotic effects are likely downstream/pleiotropic
consequences of Wnt pathway modulation or secondary functions in stress response,
not
the core biochemical function of the protein.
additional_reference_ids:
- PMID:17210684
- term:
id: GO:0016020
label: membrane
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Generic membrane localization. AXIN1 can associate with the plasma membrane.
action: ACCEPT
reason: >-
While more specific than needed (plasma membrane is more informative), not
incorrect.
- term:
id: GO:0016055
label: Wnt signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
AXIN1 is involved in the Wnt signaling pathway as a negative regulator.
action: MODIFY
reason: >-
While technically correct, this term is too broad. AXIN1 specifically negatively
regulates
canonical Wnt signaling. The more specific term GO:0090090 (negative regulation
of
canonical Wnt signaling pathway) is already present and preferred.
proposed_replacement_terms:
- id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
- term:
id: GO:0030178
label: negative regulation of Wnt signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
AXIN1 negatively regulates Wnt signaling. This is accurate but less specific
than
the canonical Wnt pathway annotation.
action: ACCEPT
reason: >-
Correct annotation. AXIN1 is primarily known for regulating canonical Wnt
signaling,
but this broader term is acceptable as IEA.
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: >-
IEA annotation from InterPro domain mapping (Axin-like family). This correctly
captures
the core function.
action: ACCEPT
reason: >-
Core function of AXIN1, supported by domain analysis and experimental evidence.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10481074
review:
summary: >-
Interaction with GSK3B demonstrated via GSK3-binding peptide studies.
action: MODIFY
reason: >-
"Protein binding" is too generic. The interaction is specifically with GSK3B,
which
is better captured by GO:0019901 (protein kinase binding) or more specifically
GO:0120283 (protein serine/threonine kinase binding).
proposed_replacement_terms:
- id: GO:0120283
label: protein serine/threonine kinase binding
supported_by:
- reference_id: PMID:10481074
supporting_text: A GSK3-binding peptide from FRAT1 selectively
inhibits the GSK3-catalysed phosphorylation of axin and
beta-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10644691
review:
summary: >-
Interaction with PP2CA (PPM1A) demonstrated - protein phosphatase that dephosphorylates
AXIN1.
action: MODIFY
reason: >-
The specific interaction is with a protein phosphatase. A more informative
term would
be appropriate if one exists for phosphatase binding.
proposed_replacement_terms:
- id: GO:0019899
label: enzyme binding
supported_by:
- reference_id: PMID:10644691
supporting_text: Protein phosphatase 2Calpha dephosphorylates axin and
activates LEF-1-dependent transcription.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10811618
review:
summary: >-
Structural characterization of AXIN1-APC interaction. The paper provides crystal
structure of the Axin-APC interaction interface.
action: MODIFY
reason: >-
The specific interaction is with APC tumor suppressor. While no specific "APC
binding"
term exists, this interaction is functionally important for destruction complex
assembly.
proposed_replacement_terms:
- id: GO:0019904
label: protein domain specific binding
supported_by:
- reference_id: PMID:10811618
supporting_text: Structural basis of the Axin-adenomatous polyposis
coli interaction.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11738041
review:
summary: >-
Structure of phosphorylated GSK3B with FRATtide peptide that inhibits beta-catenin
phosphorylation; context involves AXIN1-GSK3B interaction.
action: MODIFY
reason: >-
Interaction with GSK3B is specifically protein kinase binding.
proposed_replacement_terms:
- id: GO:0120283
label: protein serine/threonine kinase binding
supported_by:
- reference_id: PMID:11738041
supporting_text: The structure of phosphorylated GSK-3beta complexed
with a peptide, FRATtide, that inhibits beta-catenin
phosphorylation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16169070
review:
summary: >-
High-throughput protein-protein interaction network study.
action: ACCEPT
reason: >-
Generic protein binding from large-scale study. While less informative, not
incorrect.
Multiple specific interactions were identified.
supported_by:
- reference_id: PMID:16169070
supporting_text: 'A human protein-protein interaction network: a resource
for annotating the proteome.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16293619
review:
summary: >-
Study of beta-catenin-ligand interactions including AXIN1.
action: MODIFY
reason: >-
The specific interaction is with beta-catenin, which has a specific binding
term.
proposed_replacement_terms:
- id: GO:0008013
label: beta-catenin binding
supported_by:
- reference_id: PMID:16293619
supporting_text: '2005 Nov 17. Thermodynamics of beta-catenin-ligand interactions:
the roles of the N- and C-terminal tails in modulating binding affinity.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16601693
review:
summary: >-
Interaction with SMAD7 and RNF111 (Arkadia) demonstrated.
action: MODIFY
reason: >-
The specific interactions are with SMAD7 (I-SMAD binding) and RNF111 (ubiquitin
ligase
binding), which are captured by more specific terms.
proposed_replacement_terms:
- id: GO:0070411
label: I-SMAD binding
- id: GO:0031625
label: ubiquitin protein ligase binding
supported_by:
- reference_id: PMID:16601693
supporting_text: Apr 6. Axin is a scaffold protein in TGF-beta
signaling that promotes degradation of Smad7 by Arkadia.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17318175
review:
summary: >-
Study of PP1 regulation of the destruction complex; demonstrates AXIN1-PP1CA
and
AXIN1-GSK3A/B interactions.
action: MODIFY
reason: >-
Specific kinase and phosphatase interactions are documented.
proposed_replacement_terms:
- id: GO:0120283
label: protein serine/threonine kinase binding
supported_by:
- reference_id: PMID:17318175
supporting_text: Feb 22. Protein phosphatase 1 regulates assembly and
function of the beta-catenin degradation complex.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17318191
review:
summary: >-
Study of Bcr-Abl effects on beta-catenin stabilization; AXIN1 interactions
with
beta-catenin and GSK3B.
action: MODIFY
reason: >-
Specific interactions with beta-catenin and GSK3B are better captured by specific
terms.
proposed_replacement_terms:
- id: GO:0008013
label: beta-catenin binding
supported_by:
- reference_id: PMID:17318191
supporting_text: Bcr-Abl stabilizes beta-catenin in chronic myeloid
leukemia through its tyrosine phosphorylation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17510365
review:
summary: >-
Study of WTX (AMER1) negative regulation of Wnt signaling; interactions with
multiple
destruction complex components.
action: ACCEPT
reason: >-
Multiple interactions demonstrated; generic protein binding acceptable.
supported_by:
- reference_id: PMID:17510365
supporting_text: Wilms tumor suppressor WTX negatively regulates
WNT/beta-catenin signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17601533
review:
summary: >-
Study in C. elegans of Axin-like proteins.
action: ACCEPT
reason: >-
Interaction with GSK3B ortholog demonstrated.
supported_by:
- reference_id: PMID:17601533
supporting_text: 2007 Jun 6. Two functionally distinct Axin-like
proteins regulate canonical Wnt signaling in C.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18786926
review:
summary: >-
Study of DDEF (ASAP1) interaction with APC SAMP repeats.
action: ACCEPT
reason: >-
Context involves AXIN1 interactions in the APC complex.
supported_by:
- reference_id: PMID:18786926
supporting_text: 2008 Sep 11. Identification of a link between the
SAMP repeats of adenomatous polyposis coli tumor suppressor and the
Src homology 3 domain of DDEF.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19131971
review:
summary: >-
AXIN1 promotes c-Myc degradation by scaffolding a destruction complex for
c-Myc.
action: ACCEPT
reason: >-
Demonstrates AXIN1-MYC interaction as part of a c-Myc degradation complex.
supported_by:
- reference_id: PMID:19131971
supporting_text: The Axin1 scaffold protein promotes formation of a
degradation complex for c-Myc.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19166851
review:
summary: >-
Kaiso as a bimodal modulator for Wnt signaling; AXIN1-beta-catenin interactions.
action: MODIFY
reason: >-
Specific interaction with beta-catenin.
proposed_replacement_terms:
- id: GO:0008013
label: beta-catenin binding
supported_by:
- reference_id: PMID:19166851
supporting_text: 2009 Jan 21. Kaiso is a bimodal modulator for
Wnt/beta-catenin signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19202075
review:
summary: >-
Beta-arrestin links endothelin A receptor to beta-catenin signaling; AXIN1
interactions.
action: ACCEPT
reason: >-
Multiple interactions in Wnt signaling context.
supported_by:
- reference_id: PMID:19202075
supporting_text: Beta-arrestin links endothelin A receptor to
beta-catenin signaling to induce ovarian cancer cell invasion and
metastasis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19249679
review:
summary: >-
ATDC promotes Wnt signaling by stabilizing beta-catenin; interacts with AXIN1.
action: ACCEPT
reason: >-
Novel interactor identified.
supported_by:
- reference_id: PMID:19249679
supporting_text: Oncogenic function of ATDC in pancreatic cancer
through Wnt pathway activation and beta-catenin stabilization.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19303846
review:
summary: >-
DISC1 regulates neuronal progenitor proliferation via GSK3B-beta-catenin signaling;
AXIN1-GSK3B context.
action: ACCEPT
reason: >-
Destruction complex interactions.
supported_by:
- reference_id: PMID:19303846
supporting_text: Disrupted in schizophrenia 1 regulates neuronal
progenitor proliferation via modulation of GSK3beta/beta-catenin
signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19390532
review:
summary: >-
AXIN1 localizes to centrosomes and is involved in microtubule nucleation;
interacts
with gamma-tubulin.
action: ACCEPT
reason: >-
Novel function for AXIN1 in microtubule organization.
supported_by:
- reference_id: PMID:19390532
supporting_text: Axin localizes to the centrosome and is involved in
microtubule nucleation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19759537
review:
summary: >-
Tankyrase inhibition stabilizes AXIN1; demonstrates AXIN1-tankyrase interaction
and
its role in AXIN1 turnover.
action: MODIFY
reason: >-
Specific interaction with tankyrase (PARP enzyme). Enzyme binding is more
appropriate.
proposed_replacement_terms:
- id: GO:0019899
label: enzyme binding
supported_by:
- reference_id: PMID:19759537
supporting_text: Tankyrase inhibition stabilizes axin and antagonizes
Wnt signalling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20080667
review:
summary: >-
DAB2IP modulates EMT; AXIN1 interactions in Wnt context.
action: ACCEPT
reason: >-
Novel interactor.
supported_by:
- reference_id: PMID:20080667
supporting_text: Role of DAB2IP in modulating
epithelial-to-mesenchymal transition and prostate cancer metastasis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21057547
review:
summary: >-
AXIN1 is an essential co-activator for PML in p53 activation; demonstrates
AXIN1-TP53
interaction.
action: MODIFY
reason: >-
Specific interaction with p53 (TP53).
proposed_replacement_terms:
- id: GO:0002039
label: p53 binding
supported_by:
- reference_id: PMID:21057547
supporting_text: Nov 8. AXIN is an essential co-activator for the
promyelocytic leukemia protein in p53 activation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21242974
review:
summary: >-
PRMT1 methylation increases AXIN1 stability; interactions with beta-catenin
and GSK3B.
action: ACCEPT
reason: >-
Multiple interactions demonstrated.
supported_by:
- reference_id: PMID:21242974
supporting_text: Methylation by protein arginine methyltransferase 1
increases stability of Axin, a negative regulator of Wnt signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21245303
review:
summary: >-
DVL interacts with AXIN1 DIX domain to interfere with beta-catenin regulation.
action: ACCEPT
reason: >-
AXIN1-DVL interaction through DIX domain polymerization interface.
supported_by:
- reference_id: PMID:21245303
supporting_text: Dishevelled interacts with the DIX domain
polymerization interface of Axin to interfere with its function in
down-regulating β-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21988832
review:
summary: >-
Human liver protein interaction network study.
action: ACCEPT
reason: >-
Large-scale interaction study.
supported_by:
- reference_id: PMID:21988832
supporting_text: Toward an understanding of the protein interaction
network of the human liver.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22153077
review:
summary: >-
Structural basis for tankyrase substrate recognition; AXIN1-TNKS2 interaction.
action: MODIFY
reason: >-
Specific interaction with tankyrase TNKS2.
proposed_replacement_terms:
- id: GO:0019899
label: enzyme binding
supported_by:
- reference_id: PMID:22153077
supporting_text: Structural basis and sequence rules for substrate
recognition by Tankyrase explain the basis for cherubism disease.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22682247
review:
summary: >-
Wnt signaling through inhibition of beta-catenin degradation in an intact
AXIN1 complex.
action: ACCEPT
reason: >-
Multiple destruction complex interactions.
supported_by:
- reference_id: PMID:22682247
supporting_text: Wnt signaling through inhibition of β-catenin
degradation in an intact Axin1 complex.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22773187
review:
summary: >-
DP1 promotes biphasic Wnt states during neural patterning; AXIN1 interactions.
action: ACCEPT
reason: >-
Wnt pathway context.
supported_by:
- reference_id: PMID:22773187
supporting_text: Dual functions of DP1 promote biphasic Wnt-on and
Wnt-off states during anteroposterior neural patterning.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23455922
review:
summary: >-
Interlaboratory AP-MS reproducibility study.
action: ACCEPT
reason: >-
Large-scale interaction study.
supported_by:
- reference_id: PMID:23455922
supporting_text: Interlaboratory reproducibility of large-scale human
protein-complex analysis by standardized AP-MS.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23602568
review:
summary: >-
CMGC kinase interaction landscape; GSK3A/B interactions.
action: MODIFY
reason: >-
Specific kinase interactions.
proposed_replacement_terms:
- id: GO:0120283
label: protein serine/threonine kinase binding
supported_by:
- reference_id: PMID:23602568
supporting_text: 2013 Apr 18. The protein interaction landscape of the
human CMGC kinase group.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24976009
review:
summary: >-
YAP/TAZ incorporation in the beta-catenin destruction complex.
action: ACCEPT
reason: >-
Novel interactions with YAP1 in destruction complex context.
supported_by:
- reference_id: PMID:24976009
supporting_text: YAP/TAZ incorporation in the β-catenin destruction
complex orchestrates the Wnt response.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25241761
review:
summary: >-
Proximity ligation assay profiling of endogenous protein interactions in Wnt
pathway.
action: ACCEPT
reason: >-
Wnt pathway interactions validated.
supported_by:
- reference_id: PMID:25241761
supporting_text: Oct 9. Using an in situ proximity ligation assay to
systematically profile endogenous protein-protein interactions in a
pathway network.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25873176
review:
summary: >-
TGIF governs a feed-forward network empowering Wnt signaling; AXIN1-TGIF1
interaction.
action: ACCEPT
reason: >-
Novel interactor in Wnt pathway.
supported_by:
- reference_id: PMID:25873176
supporting_text: TGIF governs a feed-forward network that empowers Wnt
signaling to drive mammary tumorigenesis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26496610
review:
summary: >-
Human interactome in three quantitative dimensions.
action: ACCEPT
reason: >-
Large-scale quantitative interactome study.
supported_by:
- reference_id: PMID:26496610
supporting_text: Oct 22. A human interactome in three quantitative
dimensions organized by stoichiometries and abundances.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26871637
review:
summary: >-
Alternative splicing expansion of protein interaction capabilities.
action: ACCEPT
reason: >-
Large-scale splicing-interaction study.
supported_by:
- reference_id: PMID:26871637
supporting_text: Widespread Expansion of Protein Interaction
Capabilities by Alternative Splicing.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27098453
review:
summary: >-
WDR26 is a new partner of AXIN1 in canonical Wnt signaling.
action: ACCEPT
reason: >-
Novel interactor in Wnt pathway characterized.
supported_by:
- reference_id: PMID:27098453
supporting_text: May 3. WDR26 is a new partner of Axin1 in the
canonical Wnt signaling pathway.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:29568061
review:
summary: >-
AP-MS and BioID compatible MAC-tag for interaction and localization mapping.
action: ACCEPT
reason: >-
Large-scale interaction study.
supported_by:
- reference_id: PMID:29568061
supporting_text: An AP-MS- and BioID-compatible MAC-tag enables
comprehensive mapping of protein interactions and subcellular
localizations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32707033
review:
summary: >-
Kinase interaction network expands functional and disease roles of kinases.
action: ACCEPT
reason: >-
Large-scale kinase interaction study.
supported_by:
- reference_id: PMID:32707033
supporting_text: 2020 Jul 23. Kinase Interaction Network Expands
Functional and Disease Roles of Human Kinases.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32814053
review:
summary: >-
Interactome mapping of neurodegenerative disease proteins.
action: ACCEPT
reason: >-
Large-scale interaction study.
supported_by:
- reference_id: PMID:32814053
supporting_text: Interactome Mapping Provides a Network of
Neurodegenerative Disease Proteins and Uncovers Widespread Protein
Aggregation in Affected Brains.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
review:
summary: >-
Dual proteome-scale networks reveal cell-specific interactome remodeling.
action: ACCEPT
reason: >-
Large-scale interaction study.
supported_by:
- reference_id: PMID:33961781
supporting_text: 2021 May 6. Dual proteome-scale networks reveal
cell-specific remodeling of the human interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:35271311
review:
summary: >-
OpenCell endogenous tagging for cellular organization cartography.
action: ACCEPT
reason: >-
Large-scale localization and interaction study.
supported_by:
- reference_id: PMID:35271311
supporting_text: '2022 Mar 11. OpenCell: Endogenous tagging for the cartography
of human cellular organization.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:10811618
review:
summary: >-
AXIN1 homodimerization demonstrated in structural study of AXIN1-APC interaction.
action: ACCEPT
reason: >-
Self-association/homodimerization is important for AXIN1 function and condensate
formation via DIX domain.
supported_by:
- reference_id: PMID:10811618
supporting_text: Structural basis of the Axin-adenomatous polyposis
coli interaction.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:16169070
review:
summary: >-
High-throughput interaction network study includes AXIN1 self-interaction.
action: ACCEPT
reason: >-
Homodimerization confirmed.
supported_by:
- reference_id: PMID:16169070
supporting_text: 'A human protein-protein interaction network: a resource
for annotating the proteome.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:21245303
review:
summary: >-
DVL-AXIN1 interaction via DIX domain polymerization interface; includes AXIN1
homo-oligomerization.
action: ACCEPT
reason: >-
Homodimerization via DIX domain demonstrated.
supported_by:
- reference_id: PMID:21245303
supporting_text: Dishevelled interacts with the DIX domain
polymerization interface of Axin to interfere with its function in
down-regulating β-catenin.
- term:
id: GO:0002039
label: p53 binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 interacts with TP53 as part of the AXIN1-HIPK2-TP53 complex.
action: KEEP_AS_NON_CORE
reason: >-
TP53 binding is demonstrated but represents a secondary function of AXIN1
in stress
response, not its core function in Wnt signaling.
additional_reference_ids:
- PMID:17210684
- term:
id: GO:0005938
label: cell cortex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Cell cortex localization transferred from mouse ortholog.
action: ACCEPT
reason: >-
Consistent with AXIN1 localization at cell periphery/plasma membrane.
- term:
id: GO:0008013
label: beta-catenin binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
IEA from mouse ortholog. Beta-catenin binding is a core function.
action: ACCEPT
reason: >-
Core function, well-supported by experimental evidence.
- term:
id: GO:0015630
label: microtubule cytoskeleton
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 has been shown to localize to centrosomes and microtubule organizing
centers.
action: KEEP_AS_NON_CORE
reason: >-
Microtubule localization is documented [PMID:19390532] but represents a secondary
localization/function, not the primary cytoplasmic destruction complex function.
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
IEA from mouse ortholog. AXIN1 binds GSK3B and CK1 kinases.
action: ACCEPT
reason: >-
Core function - kinase binding is essential for destruction complex scaffolding.
- term:
id: GO:0019904
label: protein domain specific binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 binds specific domains including APC SAMP repeats and beta-catenin armadillo
repeats.
action: ACCEPT
reason: >-
AXIN1 binds specific domains of its interaction partners.
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
IEA from mouse ortholog. Core complex membership.
action: ACCEPT
reason: >-
Defining characteristic of AXIN1.
- term:
id: GO:0031410
label: cytoplasmic vesicle
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Cytoplasmic vesicle localization from mouse ortholog.
action: KEEP_AS_NON_CORE
reason: >-
May relate to membrane trafficking or Wnt signalosome dynamics, but not a
primary
localization site for AXIN1 function.
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
IEA annotation. AXIN1 binds E3 ligases RNF146 and RNF111.
action: ACCEPT
reason: >-
Important for both AXIN1 regulation (RNF146) and AXIN1 function in Smad7 degradation
(RNF111).
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 is part of the beta-catenin destruction complex.
action: ACCEPT
reason: >-
AXIN1 is part of multiple protein complexes including the destruction complex.
- term:
id: GO:0035591
label: signaling adaptor activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 functions as a signaling adaptor in Wnt and TGF-beta pathways.
action: ACCEPT
reason: >-
Core function - AXIN1 is a scaffold/adaptor protein.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
IEA from mouse ortholog. AXIN1 homodimerizes via DIX domain.
action: ACCEPT
reason: >-
Self-association is important for destruction complex function and condensate
formation.
- term:
id: GO:0042803
label: protein homodimerization activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 homodimerizes through its DIX domain.
action: ACCEPT
reason: >-
DIX domain-mediated homodimerization is well-documented.
- term:
id: GO:0046330
label: positive regulation of JNK cascade
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 activates JNK signaling independently of Wnt signaling.
action: KEEP_AS_NON_CORE
reason: >-
JNK activation is a legitimate secondary function of AXIN1 distinct from its
Wnt
pathway role, but not the core function.
additional_reference_ids:
- PMID:12192039
supported_by:
- reference_id: PMID:12192039
supporting_text: I-mfa domain proteins interact with Axin and affect
its regulation of the Wnt and c-Jun N-terminal kinase signaling
pathways.
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
IEA from mouse ortholog. AXIN1 binds SMAD7.
action: ACCEPT
reason: >-
Experimentally validated [PMID:16601693].
- term:
id: GO:0070412
label: R-SMAD binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 interaction with R-SMADs including SMAD3.
action: ACCEPT
reason: >-
Part of AXIN1's role in TGF-beta signaling.
- term:
id: GO:1990756
label: ubiquitin-like ligase-substrate adaptor activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 acts as adaptor bringing together substrates (Smad7, beta-catenin) and
E3 ligases.
action: ACCEPT
reason: >-
AXIN1 bridges substrates to E3 ligases in both Wnt (beta-catenin to beta-TrCP)
and
TGF-beta (Smad7 to Arkadia) pathways.
- term:
id: GO:1990909
label: Wnt signalosome
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
AXIN1 is recruited to the Wnt signalosome upon Wnt stimulation.
action: ACCEPT
reason: >-
Part of AXIN1's role in Wnt signal transduction.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
IDA from HPA immunofluorescence data showing nucleoplasm localization.
action: ACCEPT
reason: >-
AXIN1 can localize to nucleus under certain conditions.
- term:
id: GO:0005730
label: nucleolus
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
IDA from HPA immunofluorescence data showing nucleolus localization.
action: KEEP_AS_NON_CORE
reason: >-
Nucleolar localization may be cell type or condition dependent; not the primary
site of AXIN1 function.
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: NAS
original_reference_id: PMID:9601641
review:
summary: >-
AXIN1 promotes proteasomal degradation of beta-catenin as part of the destruction
complex function.
action: ACCEPT
reason: >-
Core function - AXIN1 scaffolds the machinery that leads to beta-catenin
ubiquitination and proteasomal degradation.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Overexpression of hAxin strongly promoted the downregulation
of wild-type beta-catenin in colon cancer cells"
- term:
id: GO:0043539
label: protein serine/threonine kinase activator activity
evidence_type: IDA
original_reference_id: PMID:9601641
review:
summary: >-
AXIN1 dramatically facilitates GSK3B phosphorylation of APC and beta-catenin
by
bringing kinase and substrates together.
action: ACCEPT
reason: >-
Core function - AXIN1 acts as a scaffold to enhance GSK3B kinase activity
toward
its substrates in the destruction complex.
supported_by:
- reference_id: PMID:9601641
supporting_text: "hAxin dramatically facilitated the phosphorylation of
APC and beta-catenin by GSK3 beta in vitro"
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IDA
original_reference_id: PMID:18593713
review:
summary: >-
IDA evidence for destruction complex membership from study of Smad7-Axin interaction.
action: ACCEPT
reason: >-
Core complex membership.
supported_by:
- reference_id: PMID:18593713
supporting_text: 2008 Jun 30. Smad7 stabilizes beta-catenin binding to
E-cadherin complex and promotes cell-cell adhesion.
- term:
id: GO:0120283
label: protein serine/threonine kinase binding
evidence_type: IPI
original_reference_id: PMID:18593713
review:
summary: >-
AXIN1 binds GSK3B as demonstrated in this study.
action: ACCEPT
reason: >-
GSK3B binding is a core function.
supported_by:
- reference_id: PMID:18593713
supporting_text: 2008 Jun 30. Smad7 stabilizes beta-catenin binding to
E-cadherin complex and promotes cell-cell adhesion.
- term:
id: GO:1904885
label: beta-catenin destruction complex assembly
evidence_type: IDA
original_reference_id: PMID:18593713
review:
summary: >-
AXIN1 is required for assembly of the destruction complex.
action: ACCEPT
reason: >-
Core function - AXIN1 is the central scaffold for destruction complex assembly.
supported_by:
- reference_id: PMID:18593713
supporting_text: 2008 Jun 30. Smad7 stabilizes beta-catenin binding to
E-cadherin complex and promotes cell-cell adhesion.
- term:
id: GO:0031398
label: positive regulation of protein ubiquitination
evidence_type: IMP
original_reference_id: PMID:16601693
review:
summary: >-
AXIN1 promotes Smad7 ubiquitination by recruiting Arkadia E3 ligase.
action: ACCEPT
reason: >-
Demonstrated function in TGF-beta signaling.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin and Arkadia cooperate with each other in promoting
Smad7 ubiquitination"
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: IPI
original_reference_id: PMID:16601693
review:
summary: >-
AXIN1 binds Arkadia (RNF111) E3 ubiquitin ligase.
action: ACCEPT
reason: >-
Interaction with E3 ligases is important for AXIN1 function.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin activates TGF-beta signaling by forming a multimeric
complex consisting of Smad7 and ubiquitin E3 ligase Arkadia"
- term:
id: GO:1990756
label: ubiquitin-like ligase-substrate adaptor activity
evidence_type: IMP
original_reference_id: PMID:16601693
review:
summary: >-
AXIN1 acts as adaptor bringing Smad7 substrate to Arkadia E3 ligase.
action: ACCEPT
reason: >-
Scaffold/adaptor function between substrate and E3 ligase.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin is a scaffold protein in TGF-beta signaling that
promotes degradation of Smad7 by Arkadia"
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195275
review:
summary: >-
TAS from Reactome pathway for phosphorylation of APC in the destruction complex.
action: ACCEPT
reason: >-
Cytosolic localization is the primary site of AXIN1 function in the destruction
complex.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195280
review:
summary: >-
TAS from Reactome - dissociation of beta-catenin from Axin and association
with
phospho-APC.
action: ACCEPT
reason: >-
Cytosolic localization is primary.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195283
review:
summary: >-
TAS from Reactome - GSK3 phosphorylation of beta-catenin at Ser37.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195287
review:
summary: >-
TAS from Reactome - GSK3 phosphorylation of beta-catenin at Thr41.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195300
review:
summary: >-
TAS from Reactome - GSK3 phosphorylation of beta-catenin at Ser33.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195304
review:
summary: >-
TAS from Reactome - Association of beta-catenin with destruction complex.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195318
review:
summary: >-
TAS from Reactome - CK1alpha phosphorylation of beta-catenin at Ser45.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2130279
review:
summary: >-
TAS from Reactome - Beta-catenin association with SCF(beta-TrCP) complex.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2130282
review:
summary: >-
TAS from Reactome - Degradation of ubiquitinated beta-catenin.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2130286
review:
summary: >-
TAS from Reactome - Multi-ubiquitination of phospho-beta-catenin.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5229343
review:
summary: >-
TAS from Reactome - AXIN phosphorylation in destruction complex.
action: ACCEPT
reason: >-
Cytosolic destruction complex function.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5339713
review:
summary: >-
TAS from Reactome - Misspliced GSK3beta mutants stabilize beta-catenin.
action: ACCEPT
reason: >-
Cytosolic context for Wnt signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21087614
review:
summary: >-
Study of natively unfolded scaffolding regions of AXIN1; interaction with
GSK3B
demonstrated.
action: ACCEPT
reason: >-
Structural characterization of AXIN1 interactions.
supported_by:
- reference_id: PMID:21087614
supporting_text: 2010 Nov 16. Critical scaffolding regions of the
tumor suppressor Axin1 are natively unfolded.
- term:
id: GO:0008013
label: beta-catenin binding
evidence_type: IPI
original_reference_id: PMID:21087614
review:
summary: >-
AXIN1-beta-catenin interaction demonstrated in structural study.
action: ACCEPT
reason: >-
Core function.
supported_by:
- reference_id: PMID:21087614
supporting_text: 2010 Nov 16. Critical scaffolding regions of the
tumor suppressor Axin1 are natively unfolded.
- term:
id: GO:0060090
label: molecular adaptor activity
evidence_type: IDA
original_reference_id: PMID:21087614
review:
summary: >-
IDA evidence for adaptor activity from structural study of AXIN1 scaffolding
regions.
action: ACCEPT
reason: >-
Core function.
supported_by:
- reference_id: PMID:21087614
supporting_text: 2010 Nov 16. Critical scaffolding regions of the
tumor suppressor Axin1 are natively unfolded.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28546513
review:
summary: >-
SIAH E3 ligases promote Wnt signaling by mediating AXIN1 degradation; AXIN1-SIAH1/SIAH2
interactions.
action: ACCEPT
reason: >-
Novel E3 ligase interaction regulating AXIN1 turnover.
supported_by:
- reference_id: PMID:28546513
supporting_text: May 25. The SIAH E3 ubiquitin ligases promote
Wnt/β-catenin signaling through mediating Wnt-induced Axin
degradation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4839734
review:
summary: >-
TAS from Reactome - AXIN mutants destabilize destruction complex.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IC
original_reference_id: PMID:9601641
review:
summary: >-
Inferred from Curator based on beta-catenin destruction complex membership.
action: ACCEPT
reason: >-
Core function, logically inferred from scaffold role in destruction complex.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble to coordinate the regulation of beta-catenin signaling"
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:10644691
review:
summary: >-
IDA evidence showing AXIN1-mediated repression of LEF-1-dependent transcription.
action: ACCEPT
reason: >-
Core function directly demonstrated.
supported_by:
- reference_id: PMID:10644691
supporting_text: "PP2C expression relieves Axin-mediated repression of LEF-1-dependent
transcription"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28829046
review:
summary: >-
GID8 is a beta-catenin nuclear retention factor; AXIN1 interactions with GID8,
GSK3B,
and beta-catenin.
action: ACCEPT
reason: >-
Novel interactor GID8 characterized.
supported_by:
- reference_id: PMID:28829046
supporting_text: Twa1/Gid8 is a β-catenin nuclear retention factor in
Wnt signaling and colorectal tumorigenesis.
- term:
id: GO:0035591
label: signaling adaptor activity
evidence_type: TAS
original_reference_id: PMID:21799911
review:
summary: >-
TAS from review of RNF146 regulation of tankyrase and AXIN1.
action: ACCEPT
reason: >-
Core function.
supported_by:
- reference_id: PMID:21799911
supporting_text: Ubiquitin ligase RNF146 regulates tankyrase and Axin
to promote Wnt signaling.
- term:
id: GO:0060090
label: molecular adaptor activity
evidence_type: IDA
original_reference_id: PMID:9601641
review:
summary: >-
Foundational paper demonstrating AXIN1 as scaffold for the destruction complex.
action: ACCEPT
reason: >-
Core function directly demonstrated.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27484798
review:
summary: >-
GSKIP regulates beta-catenin through interactions with PKA and GSK3B; AXIN1-GSK3B
context.
action: ACCEPT
reason: >-
Destruction complex interactions.
supported_by:
- reference_id: PMID:27484798
supporting_text: 2016 Aug 2. The A-Kinase Anchoring Protein (AKAP)
Glycogen Synthase Kinase 3β Interaction Protein (GSKIP) Regulates
β-Catenin through Its Interactions with Both Protein Kinase A (PKA)
and GSK3β.
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:22899650
review:
summary: >-
LRRK2 functions as Wnt signaling scaffold bridging cytosolic proteins and
LRP6;
AXIN1 role in Wnt suppression demonstrated by loss-of-function.
action: ACCEPT
reason: >-
Core function demonstrated by mutant phenotype.
supported_by:
- reference_id: PMID:22899650
supporting_text: Aug 16. LRRK2 functions as a Wnt signaling scaffold,
bridging cytosolic proteins and membrane-localized LRP6.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4641129
review:
summary: >-
TAS from Reactome - AXIN ubiquitination by SMURF2.
action: ACCEPT
reason: >-
Cytosolic context for AXIN1 regulation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4641256
review:
summary: >-
TAS from Reactome - Ubiquitinated AXIN degradation.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640861
review:
summary: >-
TAS from Reactome - RNF146 ubiquitinates ADP-ribosylated AXIN.
action: ACCEPT
reason: >-
Cytosolic context for AXIN1 regulation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640872
review:
summary: >-
TAS from Reactome - USP34 deubiquitinates AXIN1/AXIN2.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640874
review:
summary: >-
TAS from Reactome - Ub-RibC-AXIN degradation by proteasome.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640844
review:
summary: >-
TAS from Reactome - RNF146 binds RibC-AXIN:TNKS complex.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640858
review:
summary: >-
TAS from Reactome - Tankyrase ADP-ribosylates AXIN.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1504186
review:
summary: >-
TAS from Reactome - DVL recruits GSK3beta:AXIN1 to receptor complex.
action: ACCEPT
reason: >-
Cytosolic context for Wnt signaling.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-195251
review:
summary: >-
TAS from Reactome - Assembly of the destruction complex.
action: ACCEPT
reason: >-
Cytosolic localization for destruction complex assembly.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-201677
review:
summary: >-
TAS from Reactome - Phosphorylation of LRP5/6 cytoplasmic domain.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-201685
review:
summary: >-
TAS from Reactome - Beta-catenin release from destruction complex.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640862
review:
summary: >-
TAS from Reactome - Tankyrase binds AXIN.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4641134
review:
summary: >-
TAS from Reactome - SMURF2 binds AXIN.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4791278
review:
summary: >-
TAS from Reactome - APC truncation mutants have impaired AXIN binding.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4827388
review:
summary: >-
TAS from Reactome - CTNNB1 S45 mutants not phosphorylated by CK1alpha.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4839634
review:
summary: >-
TAS from Reactome - CTNNB1 S33 mutants not phosphorylated by GSK3beta.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4839635
review:
summary: >-
TAS from Reactome - CTNNB1 S37 mutants not phosphorylated by GSK3beta.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4839638
review:
summary: >-
TAS from Reactome - CTNNB1 T41 mutants not phosphorylated by GSK3beta.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4839746
review:
summary: >-
TAS from Reactome - Truncated AMER1 mutants destabilize destruction complex.
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5251555
review:
summary: >-
TAS from Reactome - Expression of AXIN1 gene.
action: ACCEPT
reason: >-
Gene expression context for cytosolic protein.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5368596
review:
summary: >-
TAS from Reactome - WNT3A stimulates caveolin-dependent internalization.
action: ACCEPT
reason: >-
Cytosolic context for Wnt signaling.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8932076
review:
summary: >-
TAS from Reactome - AXIN1 gene expression regulated by ESR1 and RUNX1.
action: ACCEPT
reason: >-
Gene expression context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-1458902
review:
summary: >-
TAS from Reactome - CK1gamma phosphorylates LRP5/6 (frog model).
action: ACCEPT
reason: >-
Cytosolic context.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12192039
review:
summary: >-
I-mfa domain proteins (MDFI, MDFIC) interact with AXIN1 and affect Wnt and
JNK
signaling.
action: ACCEPT
reason: >-
Novel interactors affecting AXIN1 function.
supported_by:
- reference_id: PMID:12192039
supporting_text: I-mfa domain proteins interact with Axin and affect
its regulation of the Wnt and c-Jun N-terminal kinase signaling
pathways.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:21383061
review:
summary: >-
USP34 regulates AXIN1 stability; nuclear localization observed.
action: ACCEPT
reason: >-
Nuclear localization documented.
supported_by:
- reference_id: PMID:21383061
supporting_text: Mar 7. The ubiquitin-specific protease USP34
regulates axin stability and Wnt/β-catenin signaling.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:21383061
review:
summary: >-
Cytoplasmic localization observed in USP34-AXIN1 study.
action: ACCEPT
reason: >-
Primary localization.
supported_by:
- reference_id: PMID:21383061
supporting_text: Mar 7. The ubiquitin-specific protease USP34
regulates axin stability and Wnt/β-catenin signaling.
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IPI
original_reference_id: PMID:19759537
review:
summary: >-
AXIN1 binds tankyrase (TNKS/TNKS2) enzymes.
action: ACCEPT
reason: >-
Important for AXIN1 regulation.
supported_by:
- reference_id: PMID:19759537
supporting_text: Tankyrase inhibition stabilizes axin and antagonizes
Wnt signalling.
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IPI
original_reference_id: PMID:21383061
review:
summary: >-
AXIN1 binds USP34 deubiquitinase.
action: ACCEPT
reason: >-
Important for AXIN1 stability regulation.
supported_by:
- reference_id: PMID:21383061
supporting_text: Mar 7. The ubiquitin-specific protease USP34
regulates axin stability and Wnt/β-catenin signaling.
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IPI
original_reference_id: PMID:21478859
review:
summary: >-
AXIN1 binds RNF146 E3 ligase and tankyrase.
action: ACCEPT
reason: >-
Important for AXIN1 regulation.
supported_by:
- reference_id: PMID:21478859
supporting_text: RNF146 is a poly(ADP-ribose)-directed E3 ligase that
regulates axin degradation and Wnt signalling.
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: IPI
original_reference_id: PMID:21478859
review:
summary: >-
AXIN1 binds RNF146 E3 ubiquitin ligase.
action: ACCEPT
reason: >-
Important for AXIN1 turnover regulation.
supported_by:
- reference_id: PMID:21478859
supporting_text: RNF146 is a poly(ADP-ribose)-directed E3 ligase that
regulates axin degradation and Wnt signalling.
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: IDA
original_reference_id: PMID:19038973
review:
summary: >-
Perinuclear localization observed in human cumulus cells.
action: ACCEPT
reason: >-
Localization pattern consistent with cytoplasmic function.
supported_by:
- reference_id: PMID:19038973
supporting_text: Identification of WNT/beta-CATENIN signaling pathway
components in human cumulus cells.
- term:
id: GO:0071944
label: cell periphery
evidence_type: IDA
original_reference_id: PMID:19038973
review:
summary: >-
Cell periphery localization observed.
action: ACCEPT
reason: >-
Consistent with membrane recruitment during Wnt signaling.
supported_by:
- reference_id: PMID:19038973
supporting_text: Identification of WNT/beta-CATENIN signaling pathway
components in human cumulus cells.
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
ISS from mouse ortholog. AXIN1 binds GSK3B and CK1 kinases.
action: ACCEPT
reason: >-
Core function.
- term:
id: GO:2000060
label: positive regulation of ubiquitin-dependent protein catabolic
process
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
ISS from mouse ortholog. AXIN1 promotes beta-catenin ubiquitination and degradation.
action: ACCEPT
reason: >-
Core function.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:17569865
review:
summary: >-
Wnt induces LRP6 signalosomes; AXIN1 cytoplasmic localization.
action: ACCEPT
reason: >-
Primary localization.
supported_by:
- reference_id: PMID:17569865
supporting_text: Wnt induces LRP6 signalosomes and promotes
dishevelled-dependent LRP6 phosphorylation.
- term:
id: GO:0065003
label: protein-containing complex assembly
evidence_type: IDA
original_reference_id: PMID:16601693
review:
summary: >-
AXIN1 promotes assembly of the Smad7-Arkadia complex for TGF-beta signaling.
action: ACCEPT
reason: >-
AXIN1 scaffolding function in complex assembly.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin activates TGF-beta signaling by forming a multimeric
complex consisting of Smad7 and ubiquitin E3 ligase Arkadia"
- term:
id: GO:0045732
label: positive regulation of protein catabolic process
evidence_type: IDA
original_reference_id: PMID:9601641
review:
summary: >-
AXIN1 promotes beta-catenin degradation.
action: ACCEPT
reason: >-
Core function.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Overexpression of hAxin strongly promoted the downregulation
of wild-type beta-catenin"
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IDA
original_reference_id: PMID:16188939
review:
summary: >-
IDA evidence for destruction complex membership from study of APC complexes.
action: ACCEPT
reason: >-
Core complex membership.
supported_by:
- reference_id: PMID:16188939
supporting_text: Sep 27. The adenomatous polyposis coli protein (APC)
exists in two distinct soluble complexes with different functions.
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IDA
original_reference_id: PMID:19759537
review:
summary: >-
Tankyrase inhibition stabilizes AXIN1 in the destruction complex.
action: ACCEPT
reason: >-
Core complex membership.
supported_by:
- reference_id: PMID:19759537
supporting_text: Tankyrase inhibition stabilizes axin and antagonizes
Wnt signalling.
- term:
id: GO:0045732
label: positive regulation of protein catabolic process
evidence_type: IC
original_reference_id: PMID:16188939
review:
summary: >-
Inferred from Curator based on destruction complex function.
action: ACCEPT
reason: >-
Logical inference from scaffold role.
supported_by:
- reference_id: PMID:16188939
supporting_text: Sep 27. The adenomatous polyposis coli protein (APC)
exists in two distinct soluble complexes with different functions.
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: IPI
original_reference_id: PMID:16601693
review:
summary: >-
AXIN1 binds SMAD7 in TGF-beta signaling context.
action: ACCEPT
reason: >-
Experimentally validated.
supported_by:
- reference_id: PMID:16601693
supporting_text: "Axin activates TGF-beta signaling by forming a multimeric
complex consisting of Smad7"
- term:
id: GO:0008013
label: beta-catenin binding
evidence_type: IDA
original_reference_id: PMID:10644691
review:
summary: >-
PP2C dephosphorylates AXIN1; beta-catenin binding context demonstrated.
action: ACCEPT
reason: >-
Core function.
supported_by:
- reference_id: PMID:10644691
supporting_text: Protein phosphatase 2Calpha dephosphorylates axin and
activates LEF-1-dependent transcription.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
ISS from mouse ortholog. AXIN1 homodimerizes.
action: ACCEPT
reason: >-
DIX domain-mediated self-association.
- term:
id: GO:0070016
label: armadillo repeat domain binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
AXIN1 binds armadillo repeats of beta-catenin.
action: ACCEPT
reason: >-
Structural basis for beta-catenin interaction.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17588722
review:
summary: >-
Htid-1 (DNAJA3) interaction with APC; AXIN1 context.
action: ACCEPT
reason: >-
APC complex interactions.
supported_by:
- reference_id: PMID:17588722
supporting_text: 2007 Jun 2. Htid-1, the human homolog of the
Drosophila melanogaster l(2)tid tumor suppressor, defines a novel
physiological role of APC.
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: IPI
original_reference_id: PMID:18593713
review:
summary: >-
Smad7-AXIN1 interaction in cell adhesion context.
action: ACCEPT
reason: >-
Validated interaction.
supported_by:
- reference_id: PMID:18593713
supporting_text: "A Smad7-Axin interaction disassociates GSK-3beta and beta-catenin
from Axin"
- term:
id: GO:0046332
label: SMAD binding
evidence_type: IPI
original_reference_id: PMID:18593713
review:
summary: >-
AXIN1 binds SMAD7.
action: ACCEPT
reason: >-
Validated interaction.
supported_by:
- reference_id: PMID:18593713
supporting_text: 2008 Jun 30. Smad7 stabilizes beta-catenin binding to
E-cadherin complex and promotes cell-cell adhesion.
- term:
id: GO:0031410
label: cytoplasmic vesicle
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
ISS from mouse ortholog.
action: KEEP_AS_NON_CORE
reason: >-
Secondary localization, not the primary site of function.
- term:
id: GO:0042803
label: protein homodimerization activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
ISS from mouse ortholog. DIX domain-mediated homodimerization.
action: ACCEPT
reason: >-
Well-supported by experimental data.
- term:
id: GO:0046330
label: positive regulation of JNK cascade
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
AXIN1 activates JNK signaling independently of Wnt.
action: KEEP_AS_NON_CORE
reason: >-
Secondary function of AXIN1 distinct from core Wnt pathway role.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9601641
review:
summary: >-
Foundational paper demonstrating AXIN1 interactions with APC, beta-catenin,
and GSK3B.
action: ACCEPT
reason: >-
Multiple core interactions demonstrated.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Human Axin (hAxin) binds directly to beta-catenin, GSK3
beta, and APC in vitro, and the endogenous proteins are found in a complex
in cells"
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IDA
original_reference_id: PMID:9601641
review:
summary: >-
Foundational paper demonstrating AXIN1 as scaffold of the destruction complex.
action: ACCEPT
reason: >-
Core complex membership demonstrated.
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble"
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:12072559
review:
summary: >-
Nuclear localization observed in colon tissue.
action: ACCEPT
reason: >-
AXIN1 can localize to nucleus.
supported_by:
- reference_id: PMID:12072559
supporting_text: Subcellular distribution of Wnt pathway proteins in
normal and neoplastic colon.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:12072559
review:
summary: >-
Cytoplasmic localization in colon tissue.
action: ACCEPT
reason: >-
Primary localization.
supported_by:
- reference_id: PMID:12072559
supporting_text: Subcellular distribution of Wnt pathway proteins in
normal and neoplastic colon.
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:12072559
review:
summary: >-
Lateral plasma membrane localization observed in colon epithelium.
action: ACCEPT
reason: >-
Tissue-specific membrane localization pattern.
supported_by:
- reference_id: PMID:12072559
supporting_text: Subcellular distribution of Wnt pathway proteins in
normal and neoplastic colon.
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with
GO terms
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data
to orthologs by curator judgment of sequence similarity
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular
Location vocabulary mapping
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation
data to orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning
models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:9601641
title: Downregulation of beta-catenin by human Axin and its association with
the APC tumor suppressor, beta-catenin and GSK3 beta.
findings:
- statement: AXIN1 acts as scaffold for destruction complex assembly
- statement: AXIN1 promotes beta-catenin phosphorylation by GSK3B
- statement: AXIN1 binds APC, beta-catenin, and GSK3B directly
- id: PMID:10644691
title: Protein phosphatase 2Calpha dephosphorylates axin and activates
LEF-1-dependent transcription.
findings:
- statement: PP2C dephosphorylates AXIN1
- statement: AXIN1 represses LEF-1-dependent transcription
- statement: AXIN1 is a negative regulator of Wnt signaling
- id: PMID:16601693
title: Axin is a scaffold protein in TGF-beta signaling that promotes
degradation of Smad7 by Arkadia.
findings:
- statement: AXIN1 activates TGF-beta signaling
- statement: AXIN1 forms complex with Smad7 and Arkadia (RNF111)
- statement: AXIN1 promotes Smad7 ubiquitination and degradation
- id: PMID:18593713
title: Smad7 stabilizes beta-catenin binding to E-cadherin complex and
promotes cell-cell adhesion.
findings:
- statement: Smad7-AXIN1 interaction affects destruction complex
- statement: Smad7 binding disassociates GSK3B and beta-catenin from AXIN1
- id: PMID:10481074
title: A GSK3-binding peptide from FRAT1 selectively inhibits the
GSK3-catalysed phosphorylation of axin and beta-catenin.
findings: []
- id: PMID:10811618
title: Structural basis of the Axin-adenomatous polyposis coli interaction.
findings: []
- id: PMID:11738041
title: The structure of phosphorylated GSK-3beta complexed with a peptide,
FRATtide, that inhibits beta-catenin phosphorylation.
findings: []
- id: PMID:16169070
title: "A human protein-protein interaction network: a resource for annotating
the proteome."
findings: []
- id: PMID:16293619
title: Beta-catenin-ligand interactions.
findings: []
- id: PMID:17318175
title: Protein phosphatase 1 regulates assembly and function of the
beta-catenin degradation complex.
findings: []
- id: PMID:17318191
title: Bcr-Abl stabilizes beta-catenin in chronic myeloid leukemia through
its tyrosine phosphorylation.
findings: []
- id: PMID:17510365
title: Wilms tumor suppressor WTX negatively regulates WNT/beta-catenin
signaling.
findings: []
- id: PMID:17601533
title: Two functionally distinct Axin-like proteins regulate canonical Wnt
signaling in C. elegans.
findings: []
- id: PMID:18786926
title: Identification of a link between the SAMP repeats of adenomatous
polyposis coli tumor suppressor and the Src homology 3 domain of DDEF.
findings: []
- id: PMID:19131971
title: The Axin1 scaffold protein promotes formation of a degradation
complex for c-Myc.
findings: []
- id: PMID:19166851
title: Kaiso is a bimodal modulator for Wnt/beta-catenin signaling.
findings: []
- id: PMID:19202075
title: Beta-arrestin links endothelin A receptor to beta-catenin signaling.
findings: []
- id: PMID:19249679
title: Oncogenic function of ATDC in pancreatic cancer through Wnt pathway
activation and beta-catenin stabilization.
findings: []
- id: PMID:19303846
title: Disrupted in schizophrenia 1 regulates neuronal progenitor
proliferation via modulation of GSK3beta/beta-catenin signaling.
findings: []
- id: PMID:19390532
title: Axin localizes to the centrosome and is involved in microtubule
nucleation.
findings: []
- id: PMID:19759537
title: Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling.
findings: []
- id: PMID:20080667
title: Role of DAB2IP in modulating epithelial-to-mesenchymal transition and
prostate cancer metastasis.
findings: []
- id: PMID:21057547
title: AXIN is an essential co-activator for the promyelocytic leukemia
protein in p53 activation.
findings: []
- id: PMID:21242974
title: Methylation by protein arginine methyltransferase 1 increases
stability of Axin, a negative regulator of Wnt signaling.
findings: []
- id: PMID:21245303
title: Dishevelled interacts with the DIX domain polymerization interface of
Axin to interfere with its function in down-regulating β-catenin.
findings: []
- id: PMID:21988832
title: Toward an understanding of the protein interaction network of the
human liver.
findings: []
- id: PMID:22153077
title: Structural basis and sequence rules for substrate recognition by
Tankyrase explain the basis for cherubism disease.
findings: []
- id: PMID:22682247
title: Wnt signaling through inhibition of β-catenin degradation in an
intact Axin1 complex.
findings: []
- id: PMID:22773187
title: Dual functions of DP1 promote biphasic Wnt-on and Wnt-off states
during anteroposterior neural patterning.
findings: []
- id: PMID:23455922
title: Interlaboratory reproducibility of large-scale human protein-complex
analysis by standardized AP-MS.
findings: []
- id: PMID:23602568
title: The protein interaction landscape of the human CMGC kinase group.
findings: []
- id: PMID:24976009
title: YAP/TAZ incorporation in the β-catenin destruction complex
orchestrates the Wnt response.
findings: []
- id: PMID:25241761
title: Using an in situ proximity ligation assay to systematically profile
endogenous protein-protein interactions in a pathway network.
findings: []
- id: PMID:25873176
title: TGIF governs a feed-forward network that empowers Wnt signaling to
drive mammary tumorigenesis.
findings: []
- id: PMID:26496610
title: Human interactome in three quantitative dimensions.
findings: []
- id: PMID:26871637
title: Widespread Expansion of Protein Interaction Capabilities by
Alternative Splicing.
findings: []
- id: PMID:27098453
title: WDR26 is a new partner of Axin1 in the canonical Wnt signaling
pathway.
findings: []
- id: PMID:29568061
title: An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping
of protein interactions and subcellular localizations.
findings: []
- id: PMID:32707033
title: Kinase Interaction Network Expands Functional and Disease Roles of
Human Kinases.
findings: []
- id: PMID:32814053
title: Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the
human interactome.
findings: []
- id: PMID:35271311
title: OpenCell Endogenous tagging for the cartography of human cellular
organization.
findings: []
- id: PMID:21087614
title: Critical scaffolding regions of the tumor suppressor Axin1 are
natively unfolded.
findings: []
- id: PMID:28546513
title: The SIAH E3 ubiquitin ligases promote Wnt/β-catenin signaling through
mediating Wnt-induced Axin degradation.
findings: []
- id: PMID:28829046
title: Twa1/Gid8 is a β-catenin nuclear retention factor in Wnt signaling
and colorectal tumorigenesis.
findings: []
- id: PMID:21799911
title: Ubiquitin ligase RNF146 regulates tankyrase and Axin to promote Wnt
signaling.
findings: []
- id: PMID:27484798
title: The A-Kinase Anchoring Protein (AKAP) Glycogen Synthase Kinase 3β
Interaction Protein (GSKIP) Regulates β-Catenin through Its Interactions
with Both Protein Kinase A (PKA) and GSK3β.
findings: []
- id: PMID:22899650
title: LRRK2 functions as a Wnt signaling scaffold, bridging cytosolic
proteins and membrane-localized LRP6.
findings: []
- id: PMID:12192039
title: I-mfa domain proteins interact with Axin and affect its regulation of
the Wnt and c-Jun N-terminal kinase signaling pathways.
findings: []
- id: PMID:21383061
title: The ubiquitin-specific protease USP34 regulates axin stability and
Wnt/β-catenin signaling.
findings: []
- id: PMID:21478859
title: RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulates axin
degradation and Wnt signalling.
findings: []
- id: PMID:19038973
title: Identification of WNT/beta-CATENIN signaling pathway components in
human cumulus cells.
findings: []
- id: PMID:17569865
title: Wnt induces LRP6 signalosomes.
findings: []
- id: PMID:16188939
title: The adenomatous polyposis coli protein (APC) exists in two distinct
soluble complexes with different functions.
findings: []
- id: PMID:17588722
title: Htid-1, the human homolog of the Drosophila melanogaster l(2)tid
tumor suppressor, defines a novel physiological role of APC.
findings: []
- id: PMID:12072559
title: Subcellular distribution of Wnt pathway proteins in normal and
neoplastic colon.
findings: []
- id: Reactome:R-HSA-195275
title: Phosphorylation of APC in the destruction complex
findings: []
- id: Reactome:R-HSA-195280
title: Dissociation of beta-catenin from Axin and association with
phospho-APC
findings: []
- id: Reactome:R-HSA-195283
title: GSK3 phosphorylation of beta-catenin at Ser37
findings: []
- id: Reactome:R-HSA-195287
title: GSK3 phosphorylation of beta-catenin at Thr41
findings: []
- id: Reactome:R-HSA-195300
title: GSK3 phosphorylation of beta-catenin at Ser33
findings: []
- id: Reactome:R-HSA-195304
title: Association of beta-catenin with destruction complex
findings: []
- id: Reactome:R-HSA-195318
title: CK1alpha phosphorylation of beta-catenin at Ser45
findings: []
- id: Reactome:R-HSA-2130279
title: Beta-catenin association with SCF(beta-TrCP) complex
findings: []
- id: Reactome:R-HSA-2130282
title: Degradation of ubiquitinated beta-catenin
findings: []
- id: Reactome:R-HSA-2130286
title: Multi-ubiquitination of phospho-beta-catenin
findings: []
- id: Reactome:R-HSA-5229343
title: AXIN phosphorylation in destruction complex
findings: []
- id: Reactome:R-HSA-5339713
title: Misspliced GSK3beta mutants stabilize beta-catenin
findings: []
- id: Reactome:R-HSA-4839734
title: AXIN mutants destabilize destruction complex
findings: []
- id: Reactome:R-HSA-4641129
title: AXIN ubiquitination by SMURF2
findings: []
- id: Reactome:R-HSA-4641256
title: Ubiquitinated AXIN degradation
findings: []
- id: Reactome:R-HSA-3640861
title: RNF146 ubiquitinates ADP-ribosylated AXIN
findings: []
- id: Reactome:R-HSA-3640872
title: USP34 deubiquitinates AXIN1/AXIN2
findings: []
- id: Reactome:R-HSA-3640874
title: Ub-RibC-AXIN degradation by proteasome
findings: []
- id: Reactome:R-HSA-3640844
title: RNF146 binds RibC-AXIN:TNKS complex
findings: []
- id: Reactome:R-HSA-3640858
title: Tankyrase ADP-ribosylates AXIN
findings: []
- id: Reactome:R-HSA-1504186
title: DVL recruits GSK3beta:AXIN1 to receptor complex
findings: []
- id: Reactome:R-HSA-195251
title: Assembly of the destruction complex
findings: []
- id: Reactome:R-HSA-201677
title: Phosphorylation of LRP5/6 cytoplasmic domain
findings: []
- id: Reactome:R-HSA-201685
title: Beta-catenin release from destruction complex
findings: []
- id: Reactome:R-HSA-3640862
title: Tankyrase binds AXIN
findings: []
- id: Reactome:R-HSA-4641134
title: SMURF2 binds AXIN
findings: []
- id: Reactome:R-HSA-4791278
title: APC truncation mutants have impaired AXIN binding
findings: []
- id: Reactome:R-HSA-4827388
title: CTNNB1 S45 mutants not phosphorylated by CK1alpha
findings: []
- id: Reactome:R-HSA-4839634
title: CTNNB1 S33 mutants not phosphorylated by GSK3beta
findings: []
- id: Reactome:R-HSA-4839635
title: CTNNB1 S37 mutants not phosphorylated by GSK3beta
findings: []
- id: Reactome:R-HSA-4839638
title: CTNNB1 T41 mutants not phosphorylated by GSK3beta
findings: []
- id: Reactome:R-HSA-4839746
title: Truncated AMER1 mutants destabilize destruction complex
findings: []
- id: Reactome:R-HSA-5251555
title: Expression of AXIN1 gene
findings: []
- id: Reactome:R-HSA-5368596
title: WNT3A stimulates caveolin-dependent internalization
findings: []
- id: Reactome:R-HSA-8932076
title: AXIN1 gene expression regulated by ESR1 and RUNX1
findings: []
- id: Reactome:R-NUL-1458902
title: CK1gamma phosphorylates LRP5/6 (frog model)
findings: []
- id: file:human/AXIN1/AXIN1-deep-research-falcon.md
title: Deep research report on AXIN1
findings: []
core_functions:
- description: >-
THE core function of AXIN1. As the central scaffold of the beta-catenin destruction
complex, AXIN1 coordinates CK1 and GSK3B phosphorylation of beta-catenin, leading
to its ubiquitination and degradation, thereby suppressing Wnt target gene
transcription.
molecular_function:
id: GO:0060090
label: molecular adaptor activity
directly_involved_in:
- id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
in_complex:
id: GO:0030877
label: beta-catenin destruction complex
locations:
- id: GO:0005829
label: cytosol
supported_by:
- reference_id: PMID:9601641
supporting_text: "Axin acts as a scaffold upon which APC, beta-catenin and
GSK3 beta assemble to coordinate the regulation of beta-catenin signaling."
proposed_new_terms: []
suggested_questions:
- question: >-
How does AXIN1 condensate formation (degradasomes) contribute to the efficiency
of beta-catenin destruction complex function?
- question: >-
What is the relative contribution of AXIN1 versus AXIN2 to Wnt pathway regulation
in different tissue contexts?
suggested_experiments: []