BIRC5 (survivin) is a member of the inhibitor of apoptosis (IAP) family that functions primarily as an essential component of the chromosomal passenger complex (CPC). Despite its historical name "apoptosis inhibitor survivin," contemporary evidence establishes that survivin's best-characterized and evolutionarily conserved function is in mitotic regulation, not apoptosis inhibition. As a CPC component, survivin associates with Aurora B kinase, INCENP, and borealin to regulate chromosome alignment, kinetochore-microtubule attachment, spindle midzone assembly, and cytokinesis. The protein localizes dynamically during mitosis: to centromeres during prometaphase/metaphase, to the spindle midzone during anaphase, and to the midbody during cytokinesis. While survivin has been implicated in anti-apoptotic activity, this appears to be indirect and context-dependent, likely mediated through interactions with XIAP and sequestration of SMAC/DIABLO, rather than direct caspase inhibition. Unlike other IAP family members, survivin lacks the full RING domain required for direct caspase ubiquitination. Expression peaks at G2/M phase and is largely absent from most normal adult tissues but highly overexpressed in cancers.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0007059
chromosome segregation
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Chromosome segregation is a core function of survivin as a CPC component. The CPC containing survivin regulates kinetochore-microtubule attachment and chromosome bi-orientation essential for proper segregation [PMID:16322459, PMID:17956729].
Reason: This annotation accurately reflects survivin's essential role in chromosome segregation as a CPC component. IBA annotations from phylogenetic analysis support this as a conserved function. Multiple studies demonstrate that survivin depletion causes chromosome missegregation and aneuploidy [PMID:16322459].
Supporting Evidence:
PMID:16322459
Proper chromosome segregation requires the attachment of sister kinetochores to microtubules from opposite spindle poles to form bi-oriented chromosomes on the metaphase spindle. The chromosome passenger complex containing Survivin and the kinase Aurora B regulates this process from the centromeres.
PMID:17956729
The chromosomal passenger complex (CPC) is a key regulator of chromosome segregation and cytokinesis.
file:human/BIRC5/BIRC5-deep-research-falcon.md
model: Edison Scientific Literature
|
|
GO:0032133
chromosome passenger complex
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin is an essential structural component of the CPC, forming a triple-helix bundle with INCENP and borealin that anchors Aurora B kinase [PMID:17956729].
Reason: This is the core cellular component annotation for survivin. Crystal structure studies at 1.4 A resolution demonstrate that survivin forms the structural core of the CPC regulatory complex [PMID:17956729]. This is survivin's primary, non-redundant cellular role.
Supporting Evidence:
PMID:17956729
Survivin, Borealin, and INCENP are the three components of the CPC that regulate the activity and localization of its enzymatic component, the kinase Aurora B. We determined the 1.4 A resolution crystal structure of the regulatory core of the CPC, revealing that Borealin and INCENP associate with the helical domain of Survivin to form a tight three-helical bundle.
|
|
GO:0000281
mitotic cytokinesis
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin localizes to the midbody during cytokinesis and is required for completion of cell division [PMID:16344111, PMID:17956729].
Reason: Mitotic cytokinesis is a core function of the CPC. Survivin mediates CPC targeting to the midbody where it is essential for cytokinesis completion. This IBA annotation is well-supported.
Supporting Evidence:
PMID:16344111
Survivin is a fascinating little protein that acts as a component of the chromosomal passenger complex, which is essential for cell division
PMID:17956729
The complex first localizes to centromeres and later associates with the central spindle and midbody.
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin is present in cytoplasm, particularly during certain cell cycle phases and in cancer cells with a mitochondrial pool [PMID:20627126, PMID:21364656].
Reason: Cytoplasmic localization is well-documented. Survivin shows nucleocytoplasmic shuttling controlled by CRM1/exportin-dependent nuclear export.
Supporting Evidence:
PMID:21364656
survivin was specifically detectable as a cytoplasmic and nuclear protein in the organ of Corti
|
|
GO:0043066
negative regulation of apoptotic process
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: While survivin has documented anti-apoptotic activity, this is likely indirect and context-dependent, mediated through XIAP interactions and SMAC sequestration rather than direct caspase inhibition. Contemporary reviews emphasize that survivin's primary function is mitotic regulation via CPC.
Reason: The deep research review states: "survivin's best-established function is as an essential CPC component regulating mitotic progression" and "Anti-apoptotic effects are context-dependent and likely mediated by networks (XIAP, SMAC) rather than direct caspase inhibition." Unlike other IAPs, survivin lacks a full RING domain for caspase ubiquitination. The apoptosis-related function is real but secondary and indirect - keep as non-core.
Supporting Evidence:
PMID:21536684
We showed that survivin monomer interacts with Smac/DIABLO and X-linked inhibitor of apoptosis protein (XIAP) both in vitro and in vivo. Due to this feature, it protects cells from caspase-dependent apoptosis
|
|
GO:0000776
kinetochore
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin localizes to kinetochores during metaphase as part of the CPC, which is essential for kinetochore-microtubule attachment [PMID:15665297].
Reason: Kinetochore localization is a core aspect of survivin's CPC function during prometaphase and metaphase. Well-supported by IDA evidence.
Supporting Evidence:
PMID:15665297
Survivin, another IAP family member, and cIAP1 were both localized on midbody microtubules at telophase
|
|
GO:0007052
mitotic spindle organization
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin, through its interaction with RAN-GTP, plays a role in mitotic spindle formation by delivering TPX2 to microtubules [PMID:18591255].
Reason: This is a core function of survivin as CPC component. The survivin-RAN complex regulates spindle assembly, particularly in tumor cells.
Supporting Evidence:
PMID:18591255
it inhibits the delivery of the Ran effector molecule TPX2 to microtubules. In turn, this results in aberrant mitotic spindle formation
|
|
GO:0051233
spindle midzone
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Survivin localizes to the spindle midzone during anaphase as part of normal CPC dynamics [PMID:17956729, PMID:16239925].
Reason: Spindle midzone localization during anaphase is a well-documented aspect of survivin's dynamic CPC localization pattern.
Supporting Evidence:
PMID:17956729
The complex first localizes to centromeres and later associates with the central spindle and midbody.
PMID:16239925
Survivin mediates targeting of the chromosomal passenger complex to the centromere and midbody.
|
|
GO:0000775
chromosome, centromeric region
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Survivin localizes to centromeres during early mitosis where it anchors the CPC via recognition of histone H3 phosphorylated at Thr-3 [PMID:16322459].
Reason: Centromeric localization is well-established and essential for CPC function in early mitosis. IEA annotation is appropriately broad and supported by multiple IDA studies.
Supporting Evidence:
PMID:16322459
The chromosome passenger complex containing Survivin and the kinase Aurora B regulates this process from the centromeres.
|
|
GO:0000776
kinetochore
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Kinetochore localization during metaphase is supported by experimental evidence [PMID:15665297].
Reason: Duplicate of IBA annotation. Both are valid; kinetochore localization is well-documented.
|
|
GO:0004869
cysteine-type endopeptidase inhibitor activity
|
IEA
GO_REF:0000043 |
MARK AS OVER ANNOTATED |
Summary: Survivin has been reported to inhibit caspases (CASP3, CASP7), but this activity is controversial and may be indirect through XIAP interactions [PMID:21536684].
Reason: Deep research indicates "Direct caspase inhibition by survivin remains unproven." Unlike other IAPs such as XIAP, survivin lacks the structural features (full RING domain) for direct caspase inhibition. Anti-apoptotic effects appear mediated through XIAP binding and SMAC sequestration. This annotation implies direct caspase inhibition which is over-annotation.
Supporting Evidence:
PMID:21536684
survivin monomer interacts with Smac/DIABLO and X-linked inhibitor of apoptosis protein (XIAP) both in vitro and in vivo
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Nuclear localization is well-documented, particularly for acetylated survivin and during mitosis when it associates with chromosomes [PMID:20627126, PMID:21364656].
Reason: Nuclear localization supported by multiple IDA studies. Acetylation at Lys-129 promotes nuclear retention by enhancing homodimerization and inhibiting CRM1-mediated export.
Supporting Evidence:
PMID:21364656
survivin was specifically detectable as a cytoplasmic and nuclear protein in the organ of Corti
|
|
GO:0005694
chromosome
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Survivin associates with chromosomes during mitosis as part of the CPC [PMID:16322459].
Reason: Chromosome association is part of the core CPC function. Appropriately general term.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Duplicate of IBA annotation - cytoplasmic localization is well-documented.
Reason: Valid IEA annotation consistent with experimental evidence.
|
|
GO:0005819
spindle
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Spindle localization is part of survivin's mitotic function [PMID:18591255].
Reason: Spindle association is essential for CPC function during anaphase.
|
|
GO:0005874
microtubule
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Survivin associates with microtubules, particularly during anaphase and cytokinesis [PMID:15665297].
Reason: Microtubule association is well-documented, particularly at spindle midzone and midbody.
Supporting Evidence:
PMID:15665297
Survivin, another IAP family member, and cIAP1 were both localized on midbody microtubules at telophase
|
|
GO:0006915
apoptotic process
|
IEA
GO_REF:0000043 |
MARK AS OVER ANNOTATED |
Summary: This annotation from UniProtKB keyword mapping reflects survivin's historical classification as an IAP. However, survivin's primary function is mitotic regulation, not apoptosis.
Reason: This IEA annotation from SPKW mapping is based on survivin's IAP family membership and gene name "apoptosis inhibitor survivin." However, deep research clearly states: "survivin's best-established function is as an essential CPC component regulating mitotic progression" and "anti-apoptotic effects are context-dependent and likely mediated by networks (XIAP, SMAC) rather than direct caspase inhibition." The core evolved function is mitosis (CPC), not apoptosis. This represents historical over-annotation based on misleading gene nomenclature.
|
|
GO:0007059
chromosome segregation
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Duplicate of IBA annotation - chromosome segregation is core CPC function.
Reason: Consistent with IBA annotation and experimental evidence.
|
|
GO:0030414
peptidase inhibitor activity
|
IEA
GO_REF:0000043 |
MARK AS OVER ANNOTATED |
Summary: Parent term of cysteine-type endopeptidase inhibitor activity. Same concerns apply.
Reason: Same rationale as GO:0004869. Direct peptidase inhibition by survivin is not well-established. Anti-apoptotic effects are indirect.
|
|
GO:0030496
midbody
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Midbody localization during cytokinesis is well-documented [PMID:15665297, PMID:17956729].
Reason: Core CPC localization during cytokinesis. Essential for cell division completion.
Supporting Evidence:
PMID:15665297
Survivin, another IAP family member, and cIAP1 were both localized on midbody microtubules at telophase
|
|
GO:0043066
negative regulation of apoptotic process
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: ARBA machine learning annotation for anti-apoptotic activity. Same caveats as IBA annotation.
Reason: Anti-apoptotic activity is documented but secondary to mitotic function. Keep as non-core.
|
|
GO:0046872
metal ion binding
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Survivin coordinates zinc ions through its BIR domain [PMID:17956729].
Reason: Crystal structure demonstrates zinc coordination. Zinc binding is essential for BIR domain structure and function.
Supporting Evidence:
PMID:17956729
We determined the 1.4 A resolution crystal structure of the regulatory core of the CPC
|
|
GO:0051301
cell division
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Cell division is the core biological process for survivin function [PMID:16344111].
Reason: This appropriately captures survivin's primary role in mitotic cell division as a CPC component.
Supporting Evidence:
PMID:16344111
Survivin is a fascinating little protein that acts as a component of the chromosomal passenger complex, which is essential for cell division
|
|
GO:0005515
protein binding
|
IPI
PMID:16239925 Survivin mediates targeting of the chromosomal passenger com... |
REMOVE |
Summary: Study demonstrates survivin interaction with borealin/CDCA8 for CPC targeting [PMID:16239925].
Reason: Generic protein binding annotation is uninformative. The specific interaction with CDCA8 is captured by CPC annotations. More specific MF terms should be used.
Proposed replacements:
chromosome passenger complex
Supporting Evidence:
PMID:16239925
Survivin mediates targeting of the chromosomal passenger complex to the centromere and midbody.
|
|
GO:0005515
protein binding
|
IPI
PMID:16291752 Molecular analysis of survivin isoforms - evidence that alte... |
REMOVE |
Summary: Study examines survivin isoform interactions and binding to borealin [PMID:16291752].
Reason: Generic protein binding is uninformative. Specific interactions captured elsewhere.
Supporting Evidence:
PMID:16291752
survivin-2beta and survivin-deltaEx3 can interact with wild type survivin but have reduced affinity for the partner protein of survivin, borealin
|
|
GO:0005515
protein binding
|
IPI
PMID:17099693 The Survivin-Crm1 interaction is essential for chromosomal p... |
REMOVE |
Summary: Study examines survivin-CRM1 interaction for CPC localization.
Reason: Generic protein binding uninformative. Publication not available for detailed review.
Supporting Evidence:
PMID:17099693
The Survivin-Crm1 interaction is essential for chromosomal passenger complex localization and function.
|
|
GO:0005515
protein binding
|
IPI
PMID:17681274 Cell death in leukemia: passenger protein regulation by topo... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:17681274
Cell death in leukemia: passenger protein regulation by topoisomerase inhibitors.
|
|
GO:0005515
protein binding
|
IPI
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
REMOVE |
Summary: Crystal structure study demonstrating survivin-borealin-INCENP complex [PMID:17956729].
Reason: Generic protein binding uninformative. The specific CPC interactions are captured by GO:0032133 (chromosome passenger complex).
Supporting Evidence:
PMID:17956729
Borealin and INCENP associate with the helical domain of Survivin to form a tight three-helical bundle
|
|
GO:0005515
protein binding
|
IPI
PMID:18243099 Mps1 phosphorylates Borealin to control Aurora B activity an... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:18243099
Mps1 phosphorylates Borealin to control Aurora B activity and chromosome alignment.
|
|
GO:0005515
protein binding
|
IPI
PMID:19357306 A single amino acid change converts Aurora-A into Aurora-B-l... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:19357306
A single amino acid change converts Aurora-A into Aurora-B-like kinase in terms of partner specificity and cellular function.
|
|
GO:0005515
protein binding
|
IPI
PMID:20638385 Interaction of Beclin 1 with survivin regulates sensitivity ... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:20638385
Epub 2010 Jul 16. Interaction of Beclin 1 with survivin regulates sensitivity of human glioma cells to TRAIL-induced apoptosis.
|
|
GO:0005515
protein binding
|
IPI
PMID:20739936 Phosphorylation of the CPC by Cdk1 promotes chromosome bi-or... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:20739936
Phosphorylation of the CPC by Cdk1 promotes chromosome bi-orientation.
|
|
GO:0005515
protein binding
|
IPI
PMID:21051298 Spatio-temporal composition of the mitotic Chromosomal Passe... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:21051298
Oct 16. Spatio-temporal composition of the mitotic Chromosomal Passenger Complex detected using in situ proximity ligation assay.
|
|
GO:0005515
protein binding
|
IPI
PMID:21225229 PAR, a protein involved in the cell cycle, is functionally r... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:21225229
PAR, a protein involved in the cell cycle, is functionally related to chromosomal passenger proteins.
|
|
GO:0005515
protein binding
|
IPI
PMID:21988832 Toward an understanding of the protein interaction network o... |
REMOVE |
Summary: Large-scale interactome study.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:21988832
Toward an understanding of the protein interaction network of the human liver.
|
|
GO:0005515
protein binding
|
IPI
PMID:23251006 Impairment of glioma stem cell survival and growth by a nove... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:23251006
Epub 2012 Dec 18. Impairment of glioma stem cell survival and growth by a novel inhibitor for Survivin-Ran protein complex.
|
|
GO:0005515
protein binding
|
IPI
PMID:24571573 The GAR domain of GAS2L3 mediates binding to the chromosomal... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:24571573
The GAR domain of GAS2L3 mediates binding to the chromosomal passenger complex and is required for localization of GAS2L3 to the constriction zone during abscission.
|
|
GO:0005515
protein binding
|
IPI
PMID:27332895 Aurora-C Interactions with Survivin and INCENP Reveal Shared... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner and relevance.
Supporting Evidence:
PMID:27332895
eCollection 2016. Aurora-C Interactions with Survivin and INCENP Reveal Shared and Distinct Features Compared with Aurora-B Chromosome Passenger Protein Complex.
|
|
GO:0005515
protein binding
|
IPI
PMID:28514442 Architecture of the human interactome defines protein commun... |
REMOVE |
Summary: Large-scale interactome study.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:28514442
Architecture of the human interactome defines protein communities and disease networks.
|
|
GO:0005515
protein binding
|
IPI
PMID:29568061 An AP-MS- and BioID-compatible MAC-tag enables comprehensive... |
REMOVE |
Summary: Large-scale interactome/BioID study.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:29568061
An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping of protein interactions and subcellular localizations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
REMOVE |
Summary: Large-scale interactome study.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:32296183
Apr 8. A reference map of the human binary protein interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... |
REMOVE |
Summary: Large-scale interactome study related to neurodegeneration.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
REMOVE |
Summary: Large-scale proteomics study.
Reason: Generic protein binding from high-throughput studies is uninformative.
Supporting Evidence:
PMID:33961781
2021 May 6. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:17099693 The Survivin-Crm1 interaction is essential for chromosomal p... |
ACCEPT |
Summary: Survivin forms homodimers in the apo state [PMID:10949038, PMID:21536684].
Reason: Survivin homodimerization is well-documented and functionally relevant. The dimer-monomer equilibrium affects function (dimers enhance tubulin stability, monomers better inhibit apoptosis).
Supporting Evidence:
PMID:17099693
The Survivin-Crm1 interaction is essential for chromosomal passenger complex localization and function.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:23251006 Impairment of glioma stem cell survival and growth by a nove... |
ACCEPT |
Summary: Publication not available for detailed review, but homodimerization is well-established.
Reason: Consistent with known homodimerization.
Supporting Evidence:
PMID:23251006
Epub 2012 Dec 18. Impairment of glioma stem cell survival and growth by a novel inhibitor for Survivin-Ran protein complex.
|
|
GO:0045171
intercellular bridge
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: Immunofluorescence data showing localization to intercellular bridge during cytokinesis.
Reason: Consistent with midbody localization during cytokinesis.
|
|
GO:0000278
mitotic cell cycle
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: Survivin is essential for mitotic cell cycle progression as a CPC component [PMID:17956729].
Reason: Core function. CPC is essential for mitosis.
Supporting Evidence:
PMID:17956729
The chromosomal passenger complex (CPC) is a key regulator of chromosome segregation and cytokinesis.
|
|
GO:0000281
mitotic cytokinesis
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: Duplicate annotation - mitotic cytokinesis is core CPC function.
Reason: Consistent with IBA annotation.
Supporting Evidence:
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:0015630
microtubule cytoskeleton
|
IDA
PMID:9859993 Control of apoptosis and mitotic spindle checkpoint by survi... |
ACCEPT |
Summary: Early study demonstrating survivin association with microtubule cytoskeleton.
Reason: Well-supported cellular component annotation.
Supporting Evidence:
PMID:9859993
Control of apoptosis and mitotic spindle checkpoint by survivin.
|
|
GO:0051256
mitotic spindle midzone assembly
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: CPC including survivin is involved in spindle midzone assembly [PMID:17956729].
Reason: Core CPC function during anaphase.
Supporting Evidence:
PMID:17956729
Association of the core "passenger" proteins creates a single structural unit, whose composite molecular surface presents conserved residues essential for central spindle and midbody localization
|
|
GO:0090267
positive regulation of mitotic cell cycle spindle assembly checkpoint
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: CPC regulates spindle assembly checkpoint signaling.
Reason: CPC function in checkpoint regulation is well-documented.
Supporting Evidence:
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:0090307
mitotic spindle assembly
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: Survivin-RAN complex involved in spindle assembly [PMID:18591255].
Reason: Core mitotic function supported by experimental evidence.
Supporting Evidence:
PMID:18591255
survivin is a novel effector of Ran signaling, and this pathway may be preferentially exploited for spindle assembly
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:1901970
positive regulation of mitotic sister chromatid separation
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: CPC including survivin is essential for sister chromatid separation [PMID:16322459].
Reason: Core CPC function in chromosome segregation.
Supporting Evidence:
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:1902425
positive regulation of attachment of mitotic spindle microtubules to kinetochore
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: CPC regulates kinetochore-microtubule attachment [PMID:16322459].
Reason: Core CPC function during prometaphase/metaphase.
Supporting Evidence:
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:1903490
positive regulation of mitotic cytokinesis
|
NAS
PMID:17956729 Structure of a Survivin-Borealin-INCENP core complex reveals... |
ACCEPT |
Summary: CPC is essential for cytokinesis completion.
Reason: Core CPC function at midbody during cytokinesis.
Supporting Evidence:
PMID:17956729
Structure of a Survivin-Borealin-INCENP core complex reveals how chromosomal passengers travel together.
|
|
GO:0043066
negative regulation of apoptotic process
|
IDA
PMID:10949038 Crystal structure and mutagenic analysis of the inhibitor-of... |
KEEP AS NON CORE |
Summary: Crystal structure study with mutagenesis showing survivin's role in apoptosis inhibition. However, this is indirect via dimerization and interaction surfaces [PMID:10949038].
Reason: The study demonstrates structural features required for anti-apoptotic activity, but this is secondary to the core mitotic function. Keep as non-core.
Supporting Evidence:
PMID:10949038
Mutagenesis analysis revealed that survivin dimerization and an extended negatively charged surface surrounding Asp-71 are required to counteract apoptosis and preserve ploidy.
|
|
GO:0005515
protein binding
|
IPI
PMID:28218735 Aurora kinase A regulates Survivin stability through targeti... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to determine specific interaction partner.
Supporting Evidence:
PMID:28218735
Aurora kinase A regulates Survivin stability through targeting FBXL7 in gastric cancer drug resistance and prognosis.
|
|
GO:0043066
negative regulation of apoptotic process
|
IMP
PMID:28218735 Aurora kinase A regulates Survivin stability through targeti... |
KEEP AS NON CORE |
Summary: Study on Aurora kinase A regulation of survivin stability through FBXL7.
Reason: Anti-apoptotic function documented but secondary to core mitotic function.
Supporting Evidence:
PMID:28218735
Aurora kinase A regulates Survivin stability through targeting FBXL7 in gastric cancer drug resistance and prognosis.
|
|
GO:0005515
protein binding
|
IPI
PMID:25778398 The Proapoptotic F-box Protein Fbxl7 Regulates Mitochondrial... |
REMOVE |
Summary: Study demonstrates survivin-FBXL7 interaction for ubiquitination.
Reason: Generic protein binding uninformative. The specific E3 ligase interaction could be better captured by more specific terms.
Supporting Evidence:
PMID:25778398
2015 Mar 16. The Proapoptotic F-box Protein Fbxl7 Regulates Mitochondrial Function by Mediating the Ubiquitylation and Proteasomal Degradation of Survivin.
|
|
GO:0043066
negative regulation of apoptotic process
|
IMP
PMID:25778398 The Proapoptotic F-box Protein Fbxl7 Regulates Mitochondrial... |
KEEP AS NON CORE |
Summary: Study links survivin to mitochondrial function and apoptosis regulation.
Reason: Anti-apoptotic function documented but secondary.
Supporting Evidence:
PMID:25778398
2015 Mar 16. The Proapoptotic F-box Protein Fbxl7 Regulates Mitochondrial Function by Mediating the Ubiquitylation and Proteasomal Degradation of Survivin.
|
|
GO:0005515
protein binding
|
IPI
PMID:23825075 Renal uptake of the antiapoptotic protein survivin is mediat... |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication.
Supporting Evidence:
PMID:23825075
Renal uptake of the antiapoptotic protein survivin is mediated by megalin at the apical membrane of the proximal tubule.
|
|
GO:0005634
nucleus
|
IDA
PMID:20627126 Expression analysis suggests a potential cytoprotective role... |
ACCEPT |
Summary: Nuclear localization demonstrated in cochlea studies [PMID:20627126].
Reason: Nuclear localization well-documented.
Supporting Evidence:
PMID:20627126
the apoptosis inhibitor protein Birc5 is expressed in cell types critical for hearing perception
|
|
GO:0005634
nucleus
|
IDA
PMID:21364656 An otoprotective role for the apoptosis inhibitor protein su... |
ACCEPT |
Summary: Nuclear localization confirmed in cochlea studies [PMID:21364656].
Reason: Consistent with other IDA evidence.
Supporting Evidence:
PMID:21364656
survivin was specifically detectable as a cytoplasmic and nuclear protein in the organ of Corti
|
|
GO:0005737
cytoplasm
|
IDA
PMID:20627126 Expression analysis suggests a potential cytoprotective role... |
ACCEPT |
Summary: Cytoplasmic localization demonstrated [PMID:20627126].
Reason: Well-documented.
Supporting Evidence:
PMID:20627126
Epub 2010 Jul 17. Expression analysis suggests a potential cytoprotective role of Birc5 in the inner ear.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:21364656 An otoprotective role for the apoptosis inhibitor protein su... |
ACCEPT |
Summary: Cytoplasmic localization confirmed [PMID:21364656].
Reason: Consistent with other evidence.
Supporting Evidence:
PMID:21364656
An otoprotective role for the apoptosis inhibitor protein survivin.
|
|
GO:0007605
sensory perception of sound
|
IEP
PMID:20627126 Expression analysis suggests a potential cytoprotective role... |
KEEP AS NON CORE |
Summary: Survivin expression correlates with auditory function in cochlea studies [PMID:20627126].
Reason: This is a tissue-specific expression pattern correlation, not a core function. The cytoprotective role in auditory cells is context-dependent.
Supporting Evidence:
PMID:20627126
the apoptosis inhibitor protein Birc5 is expressed in cell types critical for hearing perception
|
|
GO:0043066
negative regulation of apoptotic process
|
IDA
PMID:20627126 Expression analysis suggests a potential cytoprotective role... |
KEEP AS NON CORE |
Summary: Cytoprotective activity demonstrated against ototoxins [PMID:20627126].
Reason: Anti-apoptotic activity in specific cellular context, but not core function.
Supporting Evidence:
PMID:20627126
The cytoprotective activity of the guinea pig and human Birc5 protein was confirmed by cloning of the gene and by subsequent ectopic expression and challenging studies against the ototoxin gentamicin
|
|
GO:0043066
negative regulation of apoptotic process
|
IDA
PMID:21364656 An otoprotective role for the apoptosis inhibitor protein su... |
KEEP AS NON CORE |
Summary: Otoprotective role demonstrated [PMID:21364656].
Reason: Secondary function in specific tissue context.
Supporting Evidence:
PMID:21364656
overexpression of survivin from both species significantly counteracted PCD as determined by quantitating apoptotic nuclei and caspase-3 activity
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956026 |
ACCEPT |
Summary: Reactome pathway annotation for cytosolic localization.
Reason: Consistent with general cytoplasmic localization.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-4655355 |
ACCEPT |
Summary: Reactome pathway annotation for nucleoplasm localization.
Reason: Consistent with nuclear localization during CPC function.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-6790036 |
ACCEPT |
Summary: Reactome annotation - duplicate.
Reason: Consistent annotation.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-6797763 |
ACCEPT |
Summary: Reactome annotation for TP53-BIRC5 regulation.
Reason: Consistent annotation.
|
|
GO:0043066
negative regulation of apoptotic process
|
IMP
PMID:21536684 Survivin monomer plays an essential role in apoptosis regula... |
KEEP AS NON CORE |
Summary: Study demonstrates survivin monomer role in apoptosis regulation through XIAP and SMAC interactions [PMID:21536684].
Reason: This study actually supports that anti-apoptotic effects are indirect through XIAP/SMAC interactions. Keep as non-core.
Supporting Evidence:
PMID:21536684
survivin monomer interacts with Smac/DIABLO and X-linked inhibitor of apoptosis protein (XIAP) both in vitro and in vivo. Due to this feature, it protects cells from caspase-dependent apoptosis
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-141409 |
ACCEPT |
Summary: Reactome annotation for spindle checkpoint pathway.
Reason: Consistent with cytosolic localization.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-141422 |
ACCEPT |
Summary: Reactome spindle checkpoint annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-141431 |
ACCEPT |
Summary: Reactome spindle checkpoint annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-141439 |
ACCEPT |
Summary: Reactome spindle checkpoint annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1638803 |
ACCEPT |
Summary: Reactome annotation for cohesin phosphorylation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1638821 |
ACCEPT |
Summary: Reactome annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2467809 |
ACCEPT |
Summary: Reactome annotation for separase/cohesin cleavage.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2467811 |
ACCEPT |
Summary: Reactome annotation for sister chromatid separation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2468287 |
ACCEPT |
Summary: Reactome annotation for CDK1 phosphorylation of sororin.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2484822 |
ACCEPT |
Summary: Reactome annotation for kinetochore assembly.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-375302 |
ACCEPT |
Summary: Reactome annotation for kinetochore capture.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4655355 |
ACCEPT |
Summary: Reactome annotation for CPC SUMOylation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5666129 |
ACCEPT |
Summary: Reactome annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5666160 |
ACCEPT |
Summary: Reactome annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5666169 |
ACCEPT |
Summary: Reactome annotation.
Reason: Consistent annotation.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9648114 |
ACCEPT |
Summary: Reactome annotation for mitotic spindle.
Reason: Consistent annotation.
|
|
GO:0000776
kinetochore
|
IDA
PMID:15665297 cIAP1 Localizes to the nuclear compartment and modulates the... |
ACCEPT |
Summary: Kinetochore localization demonstrated [PMID:15665297].
Reason: Core CPC localization during metaphase.
Supporting Evidence:
PMID:15665297
Survivin, another IAP family member, and cIAP1 were both localized on midbody microtubules at telophase
|
|
GO:0005515
protein binding
|
IPI
PMID:20826784 Acetylation directs survivin nuclear localization to repress... |
REMOVE |
Summary: Study demonstrates survivin-STAT3 and survivin-CRM1 interactions.
Reason: Generic protein binding uninformative. Specific interactions could be captured by more specific terms.
Supporting Evidence:
PMID:20826784
2010 Sep 8. Acetylation directs survivin nuclear localization to repress STAT3 oncogenic activity.
|
|
GO:0005515
protein binding
|
IPI
PMID:21536684 Survivin monomer plays an essential role in apoptosis regula... |
REMOVE |
Summary: Study demonstrates survivin interactions with XIAP and SMAC [PMID:21536684].
Reason: Generic protein binding uninformative. The specific XIAP and SMAC interactions are functionally important but should be captured by more specific terms.
Supporting Evidence:
PMID:21536684
2011 May 2. Survivin monomer plays an essential role in apoptosis regulation.
|
|
GO:0005634
nucleus
|
IDA
PMID:15665297 cIAP1 Localizes to the nuclear compartment and modulates the... |
ACCEPT |
Summary: Nuclear localization demonstrated [PMID:15665297].
Reason: Well-documented localization.
Supporting Evidence:
PMID:15665297
cIAP1 Localizes to the nuclear compartment and modulates the cell cycle.
|
|
GO:0005634
nucleus
|
IDA
PMID:20826784 Acetylation directs survivin nuclear localization to repress... |
ACCEPT |
Summary: Nuclear localization controlled by acetylation at Lys-129.
Reason: Well-documented with mechanistic detail.
Supporting Evidence:
PMID:20826784
2010 Sep 8. Acetylation directs survivin nuclear localization to repress STAT3 oncogenic activity.
|
|
GO:0008017
microtubule binding
|
TAS
PMID:21536684 Survivin monomer plays an essential role in apoptosis regula... |
ACCEPT |
Summary: Survivin dimers enhance tubulin stability [PMID:21536684].
Reason: Microtubule binding is part of survivin's mitotic function.
Supporting Evidence:
PMID:21536684
only wild-type survivin, but not the monomer mutant form, enhances tubulin stability in cells
|
|
GO:0008284
positive regulation of cell population proliferation
|
TAS
PMID:16344111 Survivin - a protein with dual roles in mitosis and apoptosi... |
ACCEPT |
Summary: Survivin promotes cell proliferation through its role in mitosis [PMID:16344111].
Reason: Cell proliferation is a consequence of survivin's essential mitotic function.
Supporting Evidence:
PMID:16344111
Survivin is a fascinating little protein that acts as a component of the chromosomal passenger complex, which is essential for cell division, and as an inhibitor of apoptosis. With dual roles in promoting cell proliferation and preventing apoptosis
|
|
GO:0030496
midbody
|
IDA
PMID:15665297 cIAP1 Localizes to the nuclear compartment and modulates the... |
ACCEPT |
Summary: Midbody localization during cytokinesis [PMID:15665297].
Reason: Core CPC localization.
Supporting Evidence:
PMID:15665297
Survivin, another IAP family member, and cIAP1 were both localized on midbody microtubules at telophase
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
IMP
PMID:20826784 Acetylation directs survivin nuclear localization to repress... |
KEEP AS NON CORE |
Summary: Acetylated survivin represses STAT3 transactivation.
Reason: Transcriptional repression is a secondary, context-dependent function.
Supporting Evidence:
PMID:20826784
2010 Sep 8. Acetylation directs survivin nuclear localization to repress STAT3 oncogenic activity.
|
|
GO:0005515
protein binding
|
IPI
PMID:15665297 cIAP1 Localizes to the nuclear compartment and modulates the... |
REMOVE |
Summary: Survivin-cIAP1 interaction demonstrated [PMID:15665297].
Reason: Generic protein binding uninformative.
Supporting Evidence:
PMID:15665297
cIAP1 Localizes to the nuclear compartment and modulates the cell cycle.
|
|
GO:0005737
cytoplasm
|
IDA
GO_REF:0000054 |
ACCEPT |
Summary: Cytoplasmic localization from fusion protein studies.
Reason: Consistent with other evidence.
|
|
GO:0000228
nuclear chromosome
|
IDA
PMID:16322459 Chromosome alignment and segregation regulated by ubiquitina... |
ACCEPT |
Summary: Survivin associates with chromosomes during mitosis [PMID:16322459].
Reason: Core CPC function - chromosome association.
Supporting Evidence:
PMID:16322459
The chromosome passenger complex containing Survivin and the kinase Aurora B regulates this process from the centromeres.
|
|
GO:0000775
chromosome, centromeric region
|
IDA
PMID:16322459 Chromosome alignment and segregation regulated by ubiquitina... |
ACCEPT |
Summary: Centromeric localization demonstrated [PMID:16322459].
Reason: Core CPC localization during early mitosis.
Supporting Evidence:
PMID:16322459
Chromosome alignment and segregation regulated by ubiquitination of survivin.
|
|
GO:0005515
protein binding
|
IPI
PMID:14610074 Aurora-B phosphorylation in vitro identifies a residue of su... |
REMOVE |
Summary: Survivin-INCENP interaction demonstrated.
Reason: Generic protein binding. CPC interactions captured by GO:0032133.
Supporting Evidence:
PMID:14610074
2003 Nov 10. Aurora-B phosphorylation in vitro identifies a residue of survivin that is essential for its localization and binding to inner centromere protein (INCENP) in vivo.
|
|
GO:0005829
cytosol
|
IDA
PMID:18591255 A survivin-ran complex regulates spindle formation in tumor ... |
ACCEPT |
Summary: Cytosolic localization during survivin-RAN complex function [PMID:18591255].
Reason: Well-documented localization.
Supporting Evidence:
PMID:18591255
Jun 30. A survivin-ran complex regulates spindle formation in tumor cells.
|
|
GO:0019899
enzyme binding
|
IPI
PMID:16322459 Chromosome alignment and segregation regulated by ubiquitina... |
ACCEPT |
Summary: Survivin binds Aurora B kinase as part of CPC.
Reason: More informative than generic protein binding. Aurora B is the enzymatic component of CPC.
Supporting Evidence:
PMID:16322459
Chromosome alignment and segregation regulated by ubiquitination of survivin.
|
|
GO:0031267
small GTPase binding
|
IPI
PMID:18591255 A survivin-ran complex regulates spindle formation in tumor ... |
ACCEPT |
Summary: Survivin binds RAN-GTP [PMID:18591255].
Reason: Well-characterized interaction with functional significance for spindle assembly.
Supporting Evidence:
PMID:18591255
survivin associates with the small GTPase Ran in an evolutionarily conserved recognition in mammalian cells
|
|
GO:0032133
chromosome passenger complex
|
IPI
PMID:15260989 The chromosomal passenger complex is required for chromatin-... |
ACCEPT |
Summary: CPC component identification [PMID:15260989].
Reason: Core annotation for survivin's primary cellular role.
Supporting Evidence:
PMID:15260989
the vertebrate chromosomal passenger complex containing Incenp, Survivin, and the kinase Aurora B
|
|
GO:0032133
chromosome passenger complex
|
IPI
PMID:18591255 A survivin-ran complex regulates spindle formation in tumor ... |
ACCEPT |
Summary: CPC function confirmed [PMID:18591255].
Reason: Core annotation.
Supporting Evidence:
PMID:18591255
Disruption of a survivin-Ran complex does not affect the assembly of survivin within the chromosomal passenger complex
|
|
GO:0051087
protein-folding chaperone binding
|
IPI
PMID:18086682 Hsp60 regulation of tumor cell apoptosis. |
UNDECIDED |
Summary: Publication not available for detailed review.
Reason: Unable to access publication to evaluate Hsp60 interaction relevance.
Supporting Evidence:
PMID:18086682
2007 Dec 17. Hsp60 regulation of tumor cell apoptosis.
|
|
GO:0031503
protein-containing complex localization
|
IMP
PMID:16239925 Survivin mediates targeting of the chromosomal passenger com... |
ACCEPT |
Summary: Survivin mediates CPC targeting to centromeres and midbody [PMID:16239925].
Reason: Core function - survivin directs CPC localization.
Supporting Evidence:
PMID:16239925
Survivin mediates targeting of the chromosomal passenger complex to the centromere and midbody.
|
|
GO:0000775
chromosome, centromeric region
|
IDA
PMID:11084331 Survivin and the inner centromere protein INCENP show simila... |
ACCEPT |
Summary: Centromeric localization demonstrated in foundational study.
Reason: Core CPC localization.
Supporting Evidence:
PMID:11084331
Survivin and the inner centromere protein INCENP show similar cell-cycle localization and gene knockout phenotype.
|
|
GO:0030496
midbody
|
IDA
PMID:11084331 Survivin and the inner centromere protein INCENP show simila... |
ACCEPT |
Summary: Midbody localization demonstrated in foundational study.
Reason: Core CPC localization during cytokinesis.
Supporting Evidence:
PMID:11084331
Survivin and the inner centromere protein INCENP show similar cell-cycle localization and gene knockout phenotype.
|
Q: What is the precise mechanism by which survivin contributes to anti-apoptotic activity? Is it entirely through XIAP potentiation and SMAC sequestration, or are there additional direct mechanisms?
Q: Do the splice variants (survivin-2B, survivin-DeltaEx3) have any physiological function or are they non-functional products of alternative splicing?
Q: What determines the balance between survivin's mitotic and potential apoptotic functions in different cellular contexts?
Experiment: Structure-function studies with BIR domain mutants that specifically disrupt caspase binding without affecting CPC assembly to determine direct vs. indirect anti-apoptotic mechanisms.
Experiment: Isoform-specific knockdown/rescue experiments to determine if splice variants have any non-mitotic functions.
provider: falcon
model: Edison Scientific Literature
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start_time: '2026-01-18T20:18:11.399257'
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template_file: templates/gene_research_go_focused.md
template_variables:
organism: human
gene_id: BIRC5
gene_symbol: BIRC5
uniprot_accession: O15392
protein_description: 'RecName: Full=Baculoviral IAP repeat-containing protein 5;
AltName: Full=Apoptosis inhibitor 4; AltName: Full=Apoptosis inhibitor survivin;'
gene_info: Name=BIRC5; Synonyms=API4, IAP4;
organism_full: Homo sapiens (Human).
protein_family: Belongs to the IAP family. .
protein_domains: Baculoviral_IAP. (IPR051190); BIR_rpt. (IPR001370); BIR (PF00653)
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citation_count: 14
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'BIRC5' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene BIRC5 (gene ID: BIRC5, UniProt: O15392) in human.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'BIRC5' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene BIRC5 (gene ID: BIRC5, UniProt: O15392) in human.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Plan and verification
- Target identity: BIRC5 (UniProt O15392) encodes survivin (also called apoptosis inhibitor 4), a human inhibitor of apoptosis (IAP) family protein with a single BIR domain; identity and domain architecture match the UniProt description and current reviews (Apr 2024 Cancers review; Feb 2024 Translational Lung Cancer Research narrative review). URLs and dates: https://doi.org/10.3390/cancers16091705 (Apr 2024); https://doi.org/10.21037/tlcr-23-621 (Feb 2024) (wang2024survivinasa pages 1-2, pachimatla2024survivininlung pages 2-4).
Comprehensive research report: BIRC5 (survivin) in human
1) Key concepts and definitions
- Definition and structure: Survivin is a 142–amino acid, ~16.5 kDa IAP-family protein with a single N‑terminal BIR domain and a C‑terminal helical tail that mediates interactions with the chromosomal passenger complex (CPC) components (Aurora B/AURKB, INCENP, and borealin/CDCA8) (Cancers 2024 review; TLCR 2024 review). URLs: https://doi.org/10.3390/cancers16091705 (Apr 2024); https://doi.org/10.21037/tlcr-23-621 (Feb 2024) (wang2024survivinasa pages 1-2, pachimatla2024survivininlung pages 2-4).
- Primary cellular role: Although originally identified as an IAP, survivin’s best-established function is as an essential CPC component regulating mitotic progression, including centromere targeting, kinetochore–microtubule attachment, chromosome alignment, spindle midzone localization, and cytokinesis; survivin loss yields mitotic catastrophe and aneuploidy (Cancers 2024 review; 2018 background summary) (https://doi.org/10.3390/cancers16091705; publication year 2018 source without DOI in the extract) (wang2024survivinasa pages 1-2, humphry2018theroleof pages 16-21).
- Apoptosis-related activities: Survivin contributes to apoptosis resistance in cancer, often via network interactions (e.g., with XIAP and SMAC/DIABLO) rather than direct caspase inhibition; mitochondrial survivin is linked to anti-apoptotic activity (Cancers 2024 review; TLCR 2024 review). URLs: https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621 (wang2024survivinasa pages 4-5, pachimatla2024survivininlung pages 2-4).
2) Subcellular localization and dynamics
- Cell cycle regulation: BIRC5 expression peaks at G2/M and declines after mitosis; survivin localizes to centromeres in metaphase, the spindle midzone in anaphase, and the midbody during cytokinesis as part of the CPC (2018 summary; Cancers 2024 review) (publication year 2018 source without DOI in the extract; https://doi.org/10.3390/cancers16091705) (humphry2018theroleof pages 16-21, wang2024survivinasa pages 1-2).
- Nuclear–cytoplasmic shuttling: Survivin contains a Crm1/Exportin 1–dependent nuclear export signal (NES) that controls nucleocytoplasmic distribution; NES mutations alter localization and cytoprotective activity (Cancers 2024 review; Apr 2024) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 4-5).
- Mitochondrial pool: An N‑terminal targeting sequence is reported to direct a survivin pool to mitochondria in cancer cells, where it is associated with apoptosis suppression and potentially metastasis (Cancers 2024 review; Apr 2024; TLCR 2024 review; Feb 2024) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 4-5, pachimatla2024survivininlung pages 2-4).
3) Domains, complexes, and mechanistic features
- BIR domain and CPC anchoring: The BIR domain presents the epigenetic-histone-binding surface that anchors the CPC to chromatin (e.g., recognition of H3T3ph by CPC); survivin’s C‑terminus participates in CPC assembly with borealin and INCENP, enabling Aurora B kinase localization and function (2018 summary; Apr 2024 review) (publication year 2018 source without DOI in the extract; https://doi.org/10.3390/cancers16091705) (humphry2018theroleof pages 16-21, wang2024survivinasa pages 4-5).
- Post-translational regulation: Ubiquitination within the BIR domain affects centromere localization; multiple phosphorylations (e.g., by Aurora B, CDK1/PLK1) modulate CPC function; acetylation and other PTMs may influence dimerization and stability (Apr 2024 review; 2018 background) (https://doi.org/10.3390/cancers16091705; publication year 2018 source without DOI in the extract) (wang2024survivinasa pages 4-5, humphry2018theroleof pages 16-21).
- Splice variants: Several survivin splice variants (e.g., ΔEx3, 2B, 3B) have been described, which may diversify localization and function; detailed variant biology remains an active area (Apr 2024 review; Feb 2024 TLCR) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 1-2, pachimatla2024survivininlung pages 2-4).
4) Pathways and regulation
- Transcriptional control: The BIRC5 promoter is TATA-less with Sp1 sites, CDE/CHR elements, and a CpG island; oncogenic signaling (EGFR→PI3K/AKT, MAPK, NF‑κB, mTOR; Wnt/β‑catenin; Notch; YAP/Hippo; Hedgehog) upregulates BIRC5, whereas TP53, PTEN, RB, BRCA1 constrain expression (Apr 2024 Cancers review) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 1-2).
- Cell-cycle coupling: CDE/CHR promoter elements couple BIRC5 to late cell cycle, with maximal expression in G2/M and reduction after cytokinesis (2018 background; Apr 2024 review) (publication year 2018 source without DOI in the extract; https://doi.org/10.3390/cancers16091705) (humphry2018theroleof pages 16-21, wang2024survivinasa pages 1-2).
- Post-transcriptional regulation: Numerous microRNAs (e.g., miR‑34a, miR‑203) and signaling-dependent ubiquitination/phosphorylation modify survivin levels and localization (Feb 2024 TLCR review; Apr 2024 review) (https://doi.org/10.21037/tlcr-23-621; https://doi.org/10.3390/cancers16091705) (pachimatla2024survivininlung pages 2-4, wang2024survivinasa pages 4-5).
- Autophagy cross-talk: Survivin is implicated in autophagy–apoptosis switching, interacting with components such as Beclin1 and ATG5/12 and participating in mitophagy/ROS responses (2024 overview) (publication year 2024 source without DOI in the extract) (brederbonk2024roleofsurvivin pages 13-16, brederbonk2024roleofsurvivin pages 16-19).
5) Recent developments and latest research (priority 2023–2024)
- Reframing apoptosis function: Contemporary reviews emphasize that survivin’s central, non-redundant role is mitotic regulation via the CPC; anti-apoptotic effects are context-dependent and likely mediated by networks (XIAP, SMAC) and subcellular pools rather than direct caspase inhibition (Cancers 2024 review; Apr 2024) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 1-2, wang2024survivinasa pages 4-5, wang2024survivinasa pages 8-9).
- Mitochondrial survivin and therapy resistance: 2024 analyses consolidate evidence linking mitochondrial survivin enrichment in tumors to drug/radiation resistance and invasion; nuclear versus cytoplasmic localization may carry differing prognostic implications across tumor types (TLCR 2024 review; Apr 2024 Cancers review) (https://doi.org/10.21037/tlcr-23-621; https://doi.org/10.3390/cancers16091705) (pachimatla2024survivininlung pages 2-4, wang2024survivinasa pages 8-9).
- Autophagy/mitophagy interface: 2024 work highlights survivin’s role in modulating autophagic flux and mitophagy under stress, further linking it to metabolic survival strategies in cancer (2024 autophagy-focused overview) (publication year 2024 source without DOI in the extract) (brederbonk2024roleofsurvivin pages 13-16, brederbonk2024roleofsurvivin pages 16-19).
6) Current applications and real-world implementations
- Biomarker: Survivin is broadly overexpressed across cancers and largely absent from most normal adult tissues (with some expression in stem/progenitor compartments), supporting its use as a cancer-associated biomarker and prognostic indicator (Apr 2024 review; Feb 2024 TLCR review) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 7-8, pachimatla2024survivininlung pages 2-4).
- Therapeutic targeting strategies under investigation:
• Small molecules that destabilize or inhibit survivin: structure- or screen-derived compounds including S12 (targets the dimer interface) and LQZ-7F/7I (induce proteasomal degradation) show preclinical activity (Apr 2024 review) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 7-8).
• Immunotherapies and vaccines: survivin-derived peptide vaccines (e.g., SurVaxM) and dendritic-cell approaches have generated immunogenicity and early clinical signals in selected settings (summarized in Apr 2024 review) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 7-8).
• Pathway-targeted modulation: because BIRC5 is transcriptionally regulated by EGFR/PI3K/AKT, MAPK, NF‑κB, and mTOR, inhibitors in these pathways can indirectly reduce survivin expression to enhance chemo/radiotherapy (Apr 2024 review; TLCR 2024 review) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 8-9, pachimatla2024survivininlung pages 2-4).
7) Expert opinions and analysis from authoritative 2024 sources
- Consensus view: Survivin’s essential mitotic function via the CPC is the dominant, non-redundant role; its apoptosis-modulating capacity is likely indirect and compartment-specific. Therapeutically, survivin remains attractive due to the tumor-versus-normal expression differential; however, on-target, clinically effective, and specific survivin inhibitors are still an unmet need (Cancers 2024 review; TLCR 2024 review) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 1-2, wang2024survivinasa pages 7-8, pachimatla2024survivininlung pages 2-4).
8) Relevant statistics and quantitative data from recent and foundational studies
- Cell-cycle regulation magnitude: BIRC5/survivin mRNA and protein increase markedly at G2/M; foundational work summarized a ~40-fold increase at mitosis relative to G1, consistent with CPC function in late cell cycle (2018 background summary) (publication year 2018 source without DOI in the extract) (humphry2018theroleof pages 16-21).
- Clinical association breadth: Multiple tumor types report survivin overexpression correlating with poor outcomes and therapy resistance; the 2024 reviews compile multi-cancer evidence and emphasize its prevalent overexpression and limited normal-tissue expression (Apr 2024 review; Feb 2024 TLCR review) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 8-9, pachimatla2024survivininlung pages 2-4).
9) Summary of function, localization, and pathways (concise)
- Function: Essential CPC component for mitosis (centromere targeting, spindle midzone/midbody localization, chromosome segregation, cytokinesis); contributes to apoptosis resistance indirectly via network effects and mitochondrial localization (Apr 2024 and Feb 2024 reviews) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 1-2, wang2024survivinasa pages 4-5, pachimatla2024survivininlung pages 2-4).
- Localization: Dynamic CPC localization through mitosis; nucleocytoplasmic shuttling via Crm1-dependent NES; a cancer-associated mitochondrial pool (Apr 2024 Cancers; Feb 2024 TLCR) (https://doi.org/10.3390/cancers16091705; https://doi.org/10.21037/tlcr-23-621) (wang2024survivinasa pages 4-5, pachimatla2024survivininlung pages 2-4).
- Pathways: Upregulated by EGFR/PI3K/AKT, MAPK, NF‑κB, mTOR, Wnt/β‑catenin, Notch, YAP/Hippo; suppressed by TP53/PTEN/RB/BRCA1; integrated into autophagy/mitophagy responses (Apr 2024 Cancers; 2024 autophagy review) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 1-2, brederbonk2024roleofsurvivin pages 13-16, brederbonk2024roleofsurvivin pages 16-19).
Limitations and open questions
- Direct caspase inhibition by survivin remains unproven; compartment-specific roles (mitochondrial versus nuclear) and splice-variant contributions require further mechanistic clarification. Many published effects derive from overexpression or non-selective knockdowns; refined genetic/biophysical methods are needed to define endogenous functions (Apr 2024 review) (https://doi.org/10.3390/cancers16091705) (wang2024survivinasa pages 4-5).
Cited sources (URLs and dates)
- Wang Q, Greene MI. Survivin as a Therapeutic Target for the Treatment of Human Cancer. Cancers. 16:1705. Apr 2024. URL: https://doi.org/10.3390/cancers16091705 (wang2024survivinasa pages 1-2, wang2024survivinasa pages 4-5, wang2024survivinasa pages 8-9, wang2024survivinasa pages 7-8).
- Pachimatla AG, Fenstermaker R, Ciesielski M, Yendamuri S. Survivin in lung cancer: a potential target for therapy and prevention—a narrative review. Transl Lung Cancer Res. 13:362–374. Feb 2024. URL: https://doi.org/10.21037/tlcr-23-621 (pachimatla2024survivininlung pages 2-4).
- Humphry N. The role of survivin in autophagy. 2018 summary (no URL provided in extract). Used for CPC and mitotic-localization background and G2/M expression magnitude (humphry2018theroleof pages 16-21).
- Breder-Bonk C. Role of survivin as a resistor against nanotoxicity in cancer cells—Autophagy as a key mechanism. 2024 overview (no URL provided in extract). Used for autophagy cross-talk and PTM/localization overview (brederbonk2024roleofsurvivin pages 13-16, brederbonk2024roleofsurvivin pages 16-19).
References
(wang2024survivinasa pages 1-2): Qiang Wang and Mark I. Greene. Survivin as a therapeutic target for the treatment of human cancer. Cancers, 16:1705, Apr 2024. URL: https://doi.org/10.3390/cancers16091705, doi:10.3390/cancers16091705. This article has 21 citations and is from a poor quality or predatory journal.
(pachimatla2024survivininlung pages 2-4): Akhil Goud Pachimatla, Robert Fenstermaker, Michael Ciesielski, and Sai Yendamuri. Survivin in lung cancer: a potential target for therapy and prevention—a narrative review. Translational Lung Cancer Research, 13:362-374, Feb 2024. URL: https://doi.org/10.21037/tlcr-23-621, doi:10.21037/tlcr-23-621. This article has 14 citations and is from a peer-reviewed journal.
(humphry2018theroleof pages 16-21): N Humphry. The role of survivin in autophagy. Unknown journal, 2018.
(wang2024survivinasa pages 4-5): Qiang Wang and Mark I. Greene. Survivin as a therapeutic target for the treatment of human cancer. Cancers, 16:1705, Apr 2024. URL: https://doi.org/10.3390/cancers16091705, doi:10.3390/cancers16091705. This article has 21 citations and is from a poor quality or predatory journal.
(brederbonk2024roleofsurvivin pages 13-16): C Breder-Bonk. Role of survivin as a resistor against nanotoxicity in cancer cells-autophagy as a key mechanism. Unknown journal, 2024.
(brederbonk2024roleofsurvivin pages 16-19): C Breder-Bonk. Role of survivin as a resistor against nanotoxicity in cancer cells-autophagy as a key mechanism. Unknown journal, 2024.
(wang2024survivinasa pages 8-9): Qiang Wang and Mark I. Greene. Survivin as a therapeutic target for the treatment of human cancer. Cancers, 16:1705, Apr 2024. URL: https://doi.org/10.3390/cancers16091705, doi:10.3390/cancers16091705. This article has 21 citations and is from a poor quality or predatory journal.
(wang2024survivinasa pages 7-8): Qiang Wang and Mark I. Greene. Survivin as a therapeutic target for the treatment of human cancer. Cancers, 16:1705, Apr 2024. URL: https://doi.org/10.3390/cancers16091705, doi:10.3390/cancers16091705. This article has 21 citations and is from a poor quality or predatory journal.
id: O15392
gene_symbol: BIRC5
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
BIRC5 (survivin) is a member of the inhibitor of apoptosis (IAP) family that functions
primarily
as an essential component of the chromosomal passenger complex (CPC). Despite its
historical name
"apoptosis inhibitor survivin," contemporary evidence establishes that survivin's
best-characterized
and evolutionarily conserved function is in mitotic regulation, not apoptosis inhibition.
As a CPC
component, survivin associates with Aurora B kinase, INCENP, and borealin to regulate
chromosome
alignment, kinetochore-microtubule attachment, spindle midzone assembly, and cytokinesis.
The protein
localizes dynamically during mitosis: to centromeres during prometaphase/metaphase,
to the spindle
midzone during anaphase, and to the midbody during cytokinesis. While survivin has
been implicated
in anti-apoptotic activity, this appears to be indirect and context-dependent, likely
mediated through
interactions with XIAP and sequestration of SMAC/DIABLO, rather than direct caspase
inhibition.
Unlike other IAP family members, survivin lacks the full RING domain required for
direct caspase
ubiquitination. Expression peaks at G2/M phase and is largely absent from most normal
adult tissues
but highly overexpressed in cancers.
existing_annotations:
- term:
id: GO:0007059
label: chromosome segregation
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Chromosome segregation is a core function of survivin as a CPC component.
The CPC containing
survivin regulates kinetochore-microtubule attachment and chromosome bi-orientation
essential
for proper segregation [PMID:16322459, PMID:17956729].
action: ACCEPT
reason: >-
This annotation accurately reflects survivin's essential role in chromosome
segregation as a
CPC component. IBA annotations from phylogenetic analysis support this as
a conserved function.
Multiple studies demonstrate that survivin depletion causes chromosome missegregation
and
aneuploidy [PMID:16322459].
supported_by:
- reference_id: PMID:16322459
supporting_text: "Proper chromosome segregation requires the attachment
of sister kinetochores to microtubules from opposite spindle poles to
form bi-oriented chromosomes on the metaphase spindle. The chromosome
passenger complex containing Survivin and the kinase Aurora B regulates
this process from the centromeres."
- reference_id: PMID:17956729
supporting_text: "The chromosomal passenger complex (CPC) is a key regulator
of chromosome segregation and cytokinesis."
- reference_id: file:human/BIRC5/BIRC5-deep-research-falcon.md
supporting_text: 'model: Edison Scientific Literature'
- term:
id: GO:0032133
label: chromosome passenger complex
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin is an essential structural component of the CPC, forming a triple-helix
bundle with
INCENP and borealin that anchors Aurora B kinase [PMID:17956729].
action: ACCEPT
reason: >-
This is the core cellular component annotation for survivin. Crystal structure
studies at 1.4 A
resolution demonstrate that survivin forms the structural core of the CPC
regulatory complex
[PMID:17956729]. This is survivin's primary, non-redundant cellular role.
supported_by:
- reference_id: PMID:17956729
supporting_text: "Survivin, Borealin, and INCENP are the three components
of the CPC that regulate the activity and localization of its enzymatic
component, the kinase Aurora B. We determined the 1.4 A resolution crystal
structure of the regulatory core of the CPC, revealing that Borealin and
INCENP associate with the helical domain of Survivin to form a tight three-helical
bundle."
- term:
id: GO:0000281
label: mitotic cytokinesis
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin localizes to the midbody during cytokinesis and is required for completion
of cell
division [PMID:16344111, PMID:17956729].
action: ACCEPT
reason: >-
Mitotic cytokinesis is a core function of the CPC. Survivin mediates CPC targeting
to the
midbody where it is essential for cytokinesis completion. This IBA annotation
is well-supported.
supported_by:
- reference_id: PMID:16344111
supporting_text: "Survivin is a fascinating little protein that acts as
a component of the chromosomal passenger complex, which is essential for
cell division"
- reference_id: PMID:17956729
supporting_text: "The complex first localizes to centromeres and later associates
with the central spindle and midbody."
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin is present in cytoplasm, particularly during certain cell cycle phases
and in cancer
cells with a mitochondrial pool [PMID:20627126, PMID:21364656].
action: ACCEPT
reason: >-
Cytoplasmic localization is well-documented. Survivin shows nucleocytoplasmic
shuttling
controlled by CRM1/exportin-dependent nuclear export.
supported_by:
- reference_id: PMID:21364656
supporting_text: "survivin was specifically detectable as a cytoplasmic
and nuclear protein in the organ of Corti"
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
While survivin has documented anti-apoptotic activity, this is likely indirect
and context-dependent,
mediated through XIAP interactions and SMAC sequestration rather than direct
caspase inhibition.
Contemporary reviews emphasize that survivin's primary function is mitotic
regulation via CPC.
action: KEEP_AS_NON_CORE
reason: >-
The deep research review states: "survivin's best-established function is
as an essential CPC
component regulating mitotic progression" and "Anti-apoptotic effects are
context-dependent and
likely mediated by networks (XIAP, SMAC) rather than direct caspase inhibition."
Unlike other
IAPs, survivin lacks a full RING domain for caspase ubiquitination. The apoptosis-related
function is real but secondary and indirect - keep as non-core.
supported_by:
- reference_id: PMID:21536684
supporting_text: "We showed that survivin monomer interacts with Smac/DIABLO
and X-linked inhibitor of apoptosis protein (XIAP) both in vitro and in
vivo. Due to this feature, it protects cells from caspase-dependent apoptosis"
- term:
id: GO:0000776
label: kinetochore
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin localizes to kinetochores during metaphase as part of the CPC, which
is essential
for kinetochore-microtubule attachment [PMID:15665297].
action: ACCEPT
reason: >-
Kinetochore localization is a core aspect of survivin's CPC function during
prometaphase and
metaphase. Well-supported by IDA evidence.
supported_by:
- reference_id: PMID:15665297
supporting_text: "Survivin, another IAP family member, and cIAP1 were both
localized on midbody microtubules at telophase"
- term:
id: GO:0007052
label: mitotic spindle organization
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin, through its interaction with RAN-GTP, plays a role in mitotic spindle
formation by
delivering TPX2 to microtubules [PMID:18591255].
action: ACCEPT
reason: >-
This is a core function of survivin as CPC component. The survivin-RAN complex
regulates
spindle assembly, particularly in tumor cells.
supported_by:
- reference_id: PMID:18591255
supporting_text: "it inhibits the delivery of the Ran effector molecule
TPX2 to microtubules. In turn, this results in aberrant mitotic spindle
formation"
- term:
id: GO:0051233
label: spindle midzone
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Survivin localizes to the spindle midzone during anaphase as part of normal
CPC dynamics
[PMID:17956729, PMID:16239925].
action: ACCEPT
reason: >-
Spindle midzone localization during anaphase is a well-documented aspect of
survivin's
dynamic CPC localization pattern.
supported_by:
- reference_id: PMID:17956729
supporting_text: "The complex first localizes to centromeres and later associates
with the central spindle and midbody."
- reference_id: PMID:16239925
supporting_text: "Survivin mediates targeting of the chromosomal passenger
complex to the centromere and midbody."
- term:
id: GO:0000775
label: chromosome, centromeric region
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Survivin localizes to centromeres during early mitosis where it anchors the
CPC via recognition
of histone H3 phosphorylated at Thr-3 [PMID:16322459].
action: ACCEPT
reason: >-
Centromeric localization is well-established and essential for CPC function
in early mitosis.
IEA annotation is appropriately broad and supported by multiple IDA studies.
supported_by:
- reference_id: PMID:16322459
supporting_text: "The chromosome passenger complex containing Survivin and
the kinase Aurora B regulates this process from the centromeres."
- term:
id: GO:0000776
label: kinetochore
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Kinetochore localization during metaphase is supported by experimental evidence
[PMID:15665297].
action: ACCEPT
reason: >-
Duplicate of IBA annotation. Both are valid; kinetochore localization is well-documented.
- term:
id: GO:0004869
label: cysteine-type endopeptidase inhibitor activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Survivin has been reported to inhibit caspases (CASP3, CASP7), but this activity
is controversial
and may be indirect through XIAP interactions [PMID:21536684].
action: MARK_AS_OVER_ANNOTATED
reason: >-
Deep research indicates "Direct caspase inhibition by survivin remains unproven."
Unlike other
IAPs such as XIAP, survivin lacks the structural features (full RING domain)
for direct caspase
inhibition. Anti-apoptotic effects appear mediated through XIAP binding and
SMAC sequestration.
This annotation implies direct caspase inhibition which is over-annotation.
supported_by:
- reference_id: PMID:21536684
supporting_text: "survivin monomer interacts with Smac/DIABLO and X-linked
inhibitor of apoptosis protein (XIAP) both in vitro and in vivo"
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Nuclear localization is well-documented, particularly for acetylated survivin
and during
mitosis when it associates with chromosomes [PMID:20627126, PMID:21364656].
action: ACCEPT
reason: >-
Nuclear localization supported by multiple IDA studies. Acetylation at Lys-129
promotes
nuclear retention by enhancing homodimerization and inhibiting CRM1-mediated
export.
supported_by:
- reference_id: PMID:21364656
supporting_text: "survivin was specifically detectable as a cytoplasmic
and nuclear protein in the organ of Corti"
- term:
id: GO:0005694
label: chromosome
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Survivin associates with chromosomes during mitosis as part of the CPC [PMID:16322459].
action: ACCEPT
reason: >-
Chromosome association is part of the core CPC function. Appropriately general
term.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Duplicate of IBA annotation - cytoplasmic localization is well-documented.
action: ACCEPT
reason: >-
Valid IEA annotation consistent with experimental evidence.
- term:
id: GO:0005819
label: spindle
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Spindle localization is part of survivin's mitotic function [PMID:18591255].
action: ACCEPT
reason: >-
Spindle association is essential for CPC function during anaphase.
- term:
id: GO:0005874
label: microtubule
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Survivin associates with microtubules, particularly during anaphase and cytokinesis
[PMID:15665297].
action: ACCEPT
reason: >-
Microtubule association is well-documented, particularly at spindle midzone
and midbody.
supported_by:
- reference_id: PMID:15665297
supporting_text: "Survivin, another IAP family member, and cIAP1 were both
localized on midbody microtubules at telophase"
- term:
id: GO:0006915
label: apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
This annotation from UniProtKB keyword mapping reflects survivin's historical
classification
as an IAP. However, survivin's primary function is mitotic regulation, not
apoptosis.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This IEA annotation from SPKW mapping is based on survivin's IAP family membership
and gene
name "apoptosis inhibitor survivin." However, deep research clearly states:
"survivin's
best-established function is as an essential CPC component regulating mitotic
progression"
and "anti-apoptotic effects are context-dependent and likely mediated by networks
(XIAP, SMAC)
rather than direct caspase inhibition." The core evolved function is mitosis
(CPC), not
apoptosis. This represents historical over-annotation based on misleading
gene nomenclature.
- term:
id: GO:0007059
label: chromosome segregation
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Duplicate of IBA annotation - chromosome segregation is core CPC function.
action: ACCEPT
reason: >-
Consistent with IBA annotation and experimental evidence.
- term:
id: GO:0030414
label: peptidase inhibitor activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Parent term of cysteine-type endopeptidase inhibitor activity. Same concerns
apply.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Same rationale as GO:0004869. Direct peptidase inhibition by survivin is not
well-established.
Anti-apoptotic effects are indirect.
- term:
id: GO:0030496
label: midbody
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
Midbody localization during cytokinesis is well-documented [PMID:15665297,
PMID:17956729].
action: ACCEPT
reason: >-
Core CPC localization during cytokinesis. Essential for cell division completion.
supported_by:
- reference_id: PMID:15665297
supporting_text: "Survivin, another IAP family member, and cIAP1 were both
localized on midbody microtubules at telophase"
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
ARBA machine learning annotation for anti-apoptotic activity. Same caveats
as IBA annotation.
action: KEEP_AS_NON_CORE
reason: >-
Anti-apoptotic activity is documented but secondary to mitotic function. Keep
as non-core.
- term:
id: GO:0046872
label: metal ion binding
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Survivin coordinates zinc ions through its BIR domain [PMID:17956729].
action: ACCEPT
reason: >-
Crystal structure demonstrates zinc coordination. Zinc binding is essential
for BIR domain
structure and function.
supported_by:
- reference_id: PMID:17956729
supporting_text: "We determined the 1.4 A resolution crystal structure of
the regulatory core of the CPC"
- term:
id: GO:0051301
label: cell division
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
Cell division is the core biological process for survivin function [PMID:16344111].
action: ACCEPT
reason: >-
This appropriately captures survivin's primary role in mitotic cell division
as a CPC component.
supported_by:
- reference_id: PMID:16344111
supporting_text: "Survivin is a fascinating little protein that acts as
a component of the chromosomal passenger complex, which is essential for
cell division"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16239925
review:
summary: >-
Study demonstrates survivin interaction with borealin/CDCA8 for CPC targeting
[PMID:16239925].
action: REMOVE
reason: >-
Generic protein binding annotation is uninformative. The specific interaction
with CDCA8
is captured by CPC annotations. More specific MF terms should be used.
proposed_replacement_terms:
- id: GO:0032133
label: chromosome passenger complex
supported_by:
- reference_id: PMID:16239925
supporting_text: Survivin mediates targeting of the chromosomal
passenger complex to the centromere and midbody.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16291752
review:
summary: >-
Study examines survivin isoform interactions and binding to borealin [PMID:16291752].
action: REMOVE
reason: >-
Generic protein binding is uninformative. Specific interactions captured elsewhere.
supported_by:
- reference_id: PMID:16291752
supporting_text: "survivin-2beta and survivin-deltaEx3 can interact with
wild type survivin but have reduced affinity for the partner protein of
survivin, borealin"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17099693
review:
summary: >-
Study examines survivin-CRM1 interaction for CPC localization.
action: REMOVE
reason: >-
Generic protein binding uninformative. Publication not available for detailed
review.
supported_by:
- reference_id: PMID:17099693
supporting_text: The Survivin-Crm1 interaction is essential for
chromosomal passenger complex localization and function.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17681274
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:17681274
supporting_text: 'Cell death in leukemia: passenger protein regulation by
topoisomerase inhibitors.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17956729
review:
summary: >-
Crystal structure study demonstrating survivin-borealin-INCENP complex [PMID:17956729].
action: REMOVE
reason: >-
Generic protein binding uninformative. The specific CPC interactions are captured
by
GO:0032133 (chromosome passenger complex).
supported_by:
- reference_id: PMID:17956729
supporting_text: "Borealin and INCENP associate with the helical domain
of Survivin to form a tight three-helical bundle"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18243099
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:18243099
supporting_text: Mps1 phosphorylates Borealin to control Aurora B
activity and chromosome alignment.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19357306
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:19357306
supporting_text: A single amino acid change converts Aurora-A into
Aurora-B-like kinase in terms of partner specificity and cellular
function.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20638385
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:20638385
supporting_text: Epub 2010 Jul 16. Interaction of Beclin 1 with
survivin regulates sensitivity of human glioma cells to
TRAIL-induced apoptosis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20739936
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:20739936
supporting_text: Phosphorylation of the CPC by Cdk1 promotes
chromosome bi-orientation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21051298
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:21051298
supporting_text: Oct 16. Spatio-temporal composition of the mitotic
Chromosomal Passenger Complex detected using in situ proximity
ligation assay.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21225229
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:21225229
supporting_text: PAR, a protein involved in the cell cycle, is
functionally related to chromosomal passenger proteins.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21988832
review:
summary: >-
Large-scale interactome study.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:21988832
supporting_text: Toward an understanding of the protein interaction
network of the human liver.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23251006
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:23251006
supporting_text: Epub 2012 Dec 18. Impairment of glioma stem cell
survival and growth by a novel inhibitor for Survivin-Ran protein
complex.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24571573
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:24571573
supporting_text: The GAR domain of GAS2L3 mediates binding to the
chromosomal passenger complex and is required for localization of
GAS2L3 to the constriction zone during abscission.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27332895
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner and
relevance.
supported_by:
- reference_id: PMID:27332895
supporting_text: eCollection 2016. Aurora-C Interactions with Survivin
and INCENP Reveal Shared and Distinct Features Compared with
Aurora-B Chromosome Passenger Protein Complex.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28514442
review:
summary: >-
Large-scale interactome study.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:28514442
supporting_text: Architecture of the human interactome defines protein
communities and disease networks.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:29568061
review:
summary: >-
Large-scale interactome/BioID study.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:29568061
supporting_text: An AP-MS- and BioID-compatible MAC-tag enables
comprehensive mapping of protein interactions and subcellular
localizations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
review:
summary: >-
Large-scale interactome study.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:32296183
supporting_text: Apr 8. A reference map of the human binary protein
interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32814053
review:
summary: >-
Large-scale interactome study related to neurodegeneration.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:32814053
supporting_text: Interactome Mapping Provides a Network of
Neurodegenerative Disease Proteins and Uncovers Widespread Protein
Aggregation in Affected Brains.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
review:
summary: >-
Large-scale proteomics study.
action: REMOVE
reason: >-
Generic protein binding from high-throughput studies is uninformative.
supported_by:
- reference_id: PMID:33961781
supporting_text: 2021 May 6. Dual proteome-scale networks reveal
cell-specific remodeling of the human interactome.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:17099693
review:
summary: >-
Survivin forms homodimers in the apo state [PMID:10949038, PMID:21536684].
action: ACCEPT
reason: >-
Survivin homodimerization is well-documented and functionally relevant. The
dimer-monomer
equilibrium affects function (dimers enhance tubulin stability, monomers better
inhibit apoptosis).
supported_by:
- reference_id: PMID:17099693
supporting_text: The Survivin-Crm1 interaction is essential for
chromosomal passenger complex localization and function.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:23251006
review:
summary: >-
Publication not available for detailed review, but homodimerization is well-established.
action: ACCEPT
reason: >-
Consistent with known homodimerization.
supported_by:
- reference_id: PMID:23251006
supporting_text: Epub 2012 Dec 18. Impairment of glioma stem cell
survival and growth by a novel inhibitor for Survivin-Ran protein
complex.
- term:
id: GO:0045171
label: intercellular bridge
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
Immunofluorescence data showing localization to intercellular bridge during
cytokinesis.
action: ACCEPT
reason: >-
Consistent with midbody localization during cytokinesis.
- term:
id: GO:0000278
label: mitotic cell cycle
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
Survivin is essential for mitotic cell cycle progression as a CPC component
[PMID:17956729].
action: ACCEPT
reason: >-
Core function. CPC is essential for mitosis.
supported_by:
- reference_id: PMID:17956729
supporting_text: "The chromosomal passenger complex (CPC) is a key regulator
of chromosome segregation and cytokinesis."
- term:
id: GO:0000281
label: mitotic cytokinesis
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
Duplicate annotation - mitotic cytokinesis is core CPC function.
action: ACCEPT
reason: >-
Consistent with IBA annotation.
supported_by:
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:0015630
label: microtubule cytoskeleton
evidence_type: IDA
original_reference_id: PMID:9859993
review:
summary: >-
Early study demonstrating survivin association with microtubule cytoskeleton.
action: ACCEPT
reason: >-
Well-supported cellular component annotation.
supported_by:
- reference_id: PMID:9859993
supporting_text: Control of apoptosis and mitotic spindle checkpoint
by survivin.
- term:
id: GO:0051256
label: mitotic spindle midzone assembly
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
CPC including survivin is involved in spindle midzone assembly [PMID:17956729].
action: ACCEPT
reason: >-
Core CPC function during anaphase.
supported_by:
- reference_id: PMID:17956729
supporting_text: 'Association of the core "passenger" proteins creates a
single structural unit, whose composite molecular surface presents conserved
residues essential for central spindle and midbody localization'
- term:
id: GO:0090267
label: positive regulation of mitotic cell cycle spindle assembly
checkpoint
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
CPC regulates spindle assembly checkpoint signaling.
action: ACCEPT
reason: >-
CPC function in checkpoint regulation is well-documented.
supported_by:
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:0090307
label: mitotic spindle assembly
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
Survivin-RAN complex involved in spindle assembly [PMID:18591255].
action: ACCEPT
reason: >-
Core mitotic function supported by experimental evidence.
supported_by:
- reference_id: PMID:18591255
supporting_text: "survivin is a novel effector of Ran signaling, and this
pathway may be preferentially exploited for spindle assembly"
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:1901970
label: positive regulation of mitotic sister chromatid separation
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
CPC including survivin is essential for sister chromatid separation [PMID:16322459].
action: ACCEPT
reason: >-
Core CPC function in chromosome segregation.
supported_by:
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:1902425
label: positive regulation of attachment of mitotic spindle microtubules
to kinetochore
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
CPC regulates kinetochore-microtubule attachment [PMID:16322459].
action: ACCEPT
reason: >-
Core CPC function during prometaphase/metaphase.
supported_by:
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:1903490
label: positive regulation of mitotic cytokinesis
evidence_type: NAS
original_reference_id: PMID:17956729
review:
summary: >-
CPC is essential for cytokinesis completion.
action: ACCEPT
reason: >-
Core CPC function at midbody during cytokinesis.
supported_by:
- reference_id: PMID:17956729
supporting_text: Structure of a Survivin-Borealin-INCENP core complex
reveals how chromosomal passengers travel together.
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IDA
original_reference_id: PMID:10949038
review:
summary: >-
Crystal structure study with mutagenesis showing survivin's role in apoptosis
inhibition.
However, this is indirect via dimerization and interaction surfaces [PMID:10949038].
action: KEEP_AS_NON_CORE
reason: >-
The study demonstrates structural features required for anti-apoptotic activity,
but this
is secondary to the core mitotic function. Keep as non-core.
supported_by:
- reference_id: PMID:10949038
supporting_text: "Mutagenesis analysis revealed that survivin dimerization
and an extended negatively charged surface surrounding Asp-71 are required
to counteract apoptosis and preserve ploidy."
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28218735
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to determine specific interaction partner.
supported_by:
- reference_id: PMID:28218735
supporting_text: Aurora kinase A regulates Survivin stability through
targeting FBXL7 in gastric cancer drug resistance and prognosis.
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IMP
original_reference_id: PMID:28218735
review:
summary: >-
Study on Aurora kinase A regulation of survivin stability through FBXL7.
action: KEEP_AS_NON_CORE
reason: >-
Anti-apoptotic function documented but secondary to core mitotic function.
supported_by:
- reference_id: PMID:28218735
supporting_text: Aurora kinase A regulates Survivin stability through
targeting FBXL7 in gastric cancer drug resistance and prognosis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25778398
review:
summary: >-
Study demonstrates survivin-FBXL7 interaction for ubiquitination.
action: REMOVE
reason: >-
Generic protein binding uninformative. The specific E3 ligase interaction
could be
better captured by more specific terms.
supported_by:
- reference_id: PMID:25778398
supporting_text: 2015 Mar 16. The Proapoptotic F-box Protein Fbxl7
Regulates Mitochondrial Function by Mediating the Ubiquitylation and
Proteasomal Degradation of Survivin.
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IMP
original_reference_id: PMID:25778398
review:
summary: >-
Study links survivin to mitochondrial function and apoptosis regulation.
action: KEEP_AS_NON_CORE
reason: >-
Anti-apoptotic function documented but secondary.
supported_by:
- reference_id: PMID:25778398
supporting_text: 2015 Mar 16. The Proapoptotic F-box Protein Fbxl7
Regulates Mitochondrial Function by Mediating the Ubiquitylation and
Proteasomal Degradation of Survivin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23825075
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication.
supported_by:
- reference_id: PMID:23825075
supporting_text: Renal uptake of the antiapoptotic protein survivin is
mediated by megalin at the apical membrane of the proximal tubule.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:20627126
review:
summary: >-
Nuclear localization demonstrated in cochlea studies [PMID:20627126].
action: ACCEPT
reason: >-
Nuclear localization well-documented.
supported_by:
- reference_id: PMID:20627126
supporting_text: "the apoptosis inhibitor protein Birc5 is expressed in
cell types critical for hearing perception"
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:21364656
review:
summary: >-
Nuclear localization confirmed in cochlea studies [PMID:21364656].
action: ACCEPT
reason: >-
Consistent with other IDA evidence.
supported_by:
- reference_id: PMID:21364656
supporting_text: "survivin was specifically detectable as a cytoplasmic
and nuclear protein in the organ of Corti"
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:20627126
review:
summary: >-
Cytoplasmic localization demonstrated [PMID:20627126].
action: ACCEPT
reason: >-
Well-documented.
supported_by:
- reference_id: PMID:20627126
supporting_text: Epub 2010 Jul 17. Expression analysis suggests a
potential cytoprotective role of Birc5 in the inner ear.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:21364656
review:
summary: >-
Cytoplasmic localization confirmed [PMID:21364656].
action: ACCEPT
reason: >-
Consistent with other evidence.
supported_by:
- reference_id: PMID:21364656
supporting_text: An otoprotective role for the apoptosis inhibitor
protein survivin.
- term:
id: GO:0007605
label: sensory perception of sound
evidence_type: IEP
original_reference_id: PMID:20627126
review:
summary: >-
Survivin expression correlates with auditory function in cochlea studies [PMID:20627126].
action: KEEP_AS_NON_CORE
reason: >-
This is a tissue-specific expression pattern correlation, not a core function.
The
cytoprotective role in auditory cells is context-dependent.
supported_by:
- reference_id: PMID:20627126
supporting_text: "the apoptosis inhibitor protein Birc5 is expressed in
cell types critical for hearing perception"
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IDA
original_reference_id: PMID:20627126
review:
summary: >-
Cytoprotective activity demonstrated against ototoxins [PMID:20627126].
action: KEEP_AS_NON_CORE
reason: >-
Anti-apoptotic activity in specific cellular context, but not core function.
supported_by:
- reference_id: PMID:20627126
supporting_text: "The cytoprotective activity of the guinea pig and human
Birc5 protein was confirmed by cloning of the gene and by subsequent ectopic
expression and challenging studies against the ototoxin gentamicin"
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IDA
original_reference_id: PMID:21364656
review:
summary: >-
Otoprotective role demonstrated [PMID:21364656].
action: KEEP_AS_NON_CORE
reason: >-
Secondary function in specific tissue context.
supported_by:
- reference_id: PMID:21364656
supporting_text: "overexpression of survivin from both species significantly
counteracted PCD as determined by quantitating apoptotic nuclei and caspase-3
activity"
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956026
review:
summary: >-
Reactome pathway annotation for cytosolic localization.
action: ACCEPT
reason: >-
Consistent with general cytoplasmic localization.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4655355
review:
summary: >-
Reactome pathway annotation for nucleoplasm localization.
action: ACCEPT
reason: >-
Consistent with nuclear localization during CPC function.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6790036
review:
summary: >-
Reactome annotation - duplicate.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6797763
review:
summary: >-
Reactome annotation for TP53-BIRC5 regulation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IMP
original_reference_id: PMID:21536684
review:
summary: >-
Study demonstrates survivin monomer role in apoptosis regulation through XIAP
and SMAC
interactions [PMID:21536684].
action: KEEP_AS_NON_CORE
reason: >-
This study actually supports that anti-apoptotic effects are indirect through
XIAP/SMAC
interactions. Keep as non-core.
supported_by:
- reference_id: PMID:21536684
supporting_text: "survivin monomer interacts with Smac/DIABLO and X-linked
inhibitor of apoptosis protein (XIAP) both in vitro and in vivo. Due to
this feature, it protects cells from caspase-dependent apoptosis"
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-141409
review:
summary: >-
Reactome annotation for spindle checkpoint pathway.
action: ACCEPT
reason: >-
Consistent with cytosolic localization.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-141422
review:
summary: >-
Reactome spindle checkpoint annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-141431
review:
summary: >-
Reactome spindle checkpoint annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-141439
review:
summary: >-
Reactome spindle checkpoint annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1638803
review:
summary: >-
Reactome annotation for cohesin phosphorylation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1638821
review:
summary: >-
Reactome annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2467809
review:
summary: >-
Reactome annotation for separase/cohesin cleavage.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2467811
review:
summary: >-
Reactome annotation for sister chromatid separation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2468287
review:
summary: >-
Reactome annotation for CDK1 phosphorylation of sororin.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2484822
review:
summary: >-
Reactome annotation for kinetochore assembly.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-375302
review:
summary: >-
Reactome annotation for kinetochore capture.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4655355
review:
summary: >-
Reactome annotation for CPC SUMOylation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5666129
review:
summary: >-
Reactome annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5666160
review:
summary: >-
Reactome annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5666169
review:
summary: >-
Reactome annotation.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9648114
review:
summary: >-
Reactome annotation for mitotic spindle.
action: ACCEPT
reason: >-
Consistent annotation.
- term:
id: GO:0000776
label: kinetochore
evidence_type: IDA
original_reference_id: PMID:15665297
review:
summary: >-
Kinetochore localization demonstrated [PMID:15665297].
action: ACCEPT
reason: >-
Core CPC localization during metaphase.
supported_by:
- reference_id: PMID:15665297
supporting_text: "Survivin, another IAP family member, and cIAP1 were both
localized on midbody microtubules at telophase"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20826784
review:
summary: >-
Study demonstrates survivin-STAT3 and survivin-CRM1 interactions.
action: REMOVE
reason: >-
Generic protein binding uninformative. Specific interactions could be captured
by
more specific terms.
supported_by:
- reference_id: PMID:20826784
supporting_text: 2010 Sep 8. Acetylation directs survivin nuclear
localization to repress STAT3 oncogenic activity.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21536684
review:
summary: >-
Study demonstrates survivin interactions with XIAP and SMAC [PMID:21536684].
action: REMOVE
reason: >-
Generic protein binding uninformative. The specific XIAP and SMAC interactions
are
functionally important but should be captured by more specific terms.
supported_by:
- reference_id: PMID:21536684
supporting_text: 2011 May 2. Survivin monomer plays an essential role
in apoptosis regulation.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15665297
review:
summary: >-
Nuclear localization demonstrated [PMID:15665297].
action: ACCEPT
reason: >-
Well-documented localization.
supported_by:
- reference_id: PMID:15665297
supporting_text: cIAP1 Localizes to the nuclear compartment and
modulates the cell cycle.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:20826784
review:
summary: >-
Nuclear localization controlled by acetylation at Lys-129.
action: ACCEPT
reason: >-
Well-documented with mechanistic detail.
supported_by:
- reference_id: PMID:20826784
supporting_text: 2010 Sep 8. Acetylation directs survivin nuclear
localization to repress STAT3 oncogenic activity.
- term:
id: GO:0008017
label: microtubule binding
evidence_type: TAS
original_reference_id: PMID:21536684
review:
summary: >-
Survivin dimers enhance tubulin stability [PMID:21536684].
action: ACCEPT
reason: >-
Microtubule binding is part of survivin's mitotic function.
supported_by:
- reference_id: PMID:21536684
supporting_text: "only wild-type survivin, but not the monomer mutant form,
enhances tubulin stability in cells"
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: TAS
original_reference_id: PMID:16344111
review:
summary: >-
Survivin promotes cell proliferation through its role in mitosis [PMID:16344111].
action: ACCEPT
reason: >-
Cell proliferation is a consequence of survivin's essential mitotic function.
supported_by:
- reference_id: PMID:16344111
supporting_text: "Survivin is a fascinating little protein that acts as
a component of the chromosomal passenger complex, which is essential for
cell division, and as an inhibitor of apoptosis. With dual roles in promoting
cell proliferation and preventing apoptosis"
- term:
id: GO:0030496
label: midbody
evidence_type: IDA
original_reference_id: PMID:15665297
review:
summary: >-
Midbody localization during cytokinesis [PMID:15665297].
action: ACCEPT
reason: >-
Core CPC localization.
supported_by:
- reference_id: PMID:15665297
supporting_text: "Survivin, another IAP family member, and cIAP1 were both
localized on midbody microtubules at telophase"
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:20826784
review:
summary: >-
Acetylated survivin represses STAT3 transactivation.
action: KEEP_AS_NON_CORE
reason: >-
Transcriptional repression is a secondary, context-dependent function.
supported_by:
- reference_id: PMID:20826784
supporting_text: 2010 Sep 8. Acetylation directs survivin nuclear
localization to repress STAT3 oncogenic activity.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15665297
review:
summary: >-
Survivin-cIAP1 interaction demonstrated [PMID:15665297].
action: REMOVE
reason: >-
Generic protein binding uninformative.
supported_by:
- reference_id: PMID:15665297
supporting_text: cIAP1 Localizes to the nuclear compartment and
modulates the cell cycle.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: GO_REF:0000054
review:
summary: >-
Cytoplasmic localization from fusion protein studies.
action: ACCEPT
reason: >-
Consistent with other evidence.
- term:
id: GO:0000228
label: nuclear chromosome
evidence_type: IDA
original_reference_id: PMID:16322459
review:
summary: >-
Survivin associates with chromosomes during mitosis [PMID:16322459].
action: ACCEPT
reason: >-
Core CPC function - chromosome association.
supported_by:
- reference_id: PMID:16322459
supporting_text: "The chromosome passenger complex containing Survivin and
the kinase Aurora B regulates this process from the centromeres."
- term:
id: GO:0000775
label: chromosome, centromeric region
evidence_type: IDA
original_reference_id: PMID:16322459
review:
summary: >-
Centromeric localization demonstrated [PMID:16322459].
action: ACCEPT
reason: >-
Core CPC localization during early mitosis.
supported_by:
- reference_id: PMID:16322459
supporting_text: Chromosome alignment and segregation regulated by
ubiquitination of survivin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:14610074
review:
summary: >-
Survivin-INCENP interaction demonstrated.
action: REMOVE
reason: >-
Generic protein binding. CPC interactions captured by GO:0032133.
supported_by:
- reference_id: PMID:14610074
supporting_text: 2003 Nov 10. Aurora-B phosphorylation in vitro
identifies a residue of survivin that is essential for its
localization and binding to inner centromere protein (INCENP) in
vivo.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:18591255
review:
summary: >-
Cytosolic localization during survivin-RAN complex function [PMID:18591255].
action: ACCEPT
reason: >-
Well-documented localization.
supported_by:
- reference_id: PMID:18591255
supporting_text: Jun 30. A survivin-ran complex regulates spindle
formation in tumor cells.
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IPI
original_reference_id: PMID:16322459
review:
summary: >-
Survivin binds Aurora B kinase as part of CPC.
action: ACCEPT
reason: >-
More informative than generic protein binding. Aurora B is the enzymatic component
of CPC.
supported_by:
- reference_id: PMID:16322459
supporting_text: Chromosome alignment and segregation regulated by
ubiquitination of survivin.
- term:
id: GO:0031267
label: small GTPase binding
evidence_type: IPI
original_reference_id: PMID:18591255
review:
summary: >-
Survivin binds RAN-GTP [PMID:18591255].
action: ACCEPT
reason: >-
Well-characterized interaction with functional significance for spindle assembly.
supported_by:
- reference_id: PMID:18591255
supporting_text: "survivin associates with the small GTPase Ran in an evolutionarily
conserved recognition in mammalian cells"
- term:
id: GO:0032133
label: chromosome passenger complex
evidence_type: IPI
original_reference_id: PMID:15260989
review:
summary: >-
CPC component identification [PMID:15260989].
action: ACCEPT
reason: >-
Core annotation for survivin's primary cellular role.
supported_by:
- reference_id: PMID:15260989
supporting_text: "the vertebrate chromosomal passenger complex containing
Incenp, Survivin, and the kinase Aurora B"
- term:
id: GO:0032133
label: chromosome passenger complex
evidence_type: IPI
original_reference_id: PMID:18591255
review:
summary: >-
CPC function confirmed [PMID:18591255].
action: ACCEPT
reason: >-
Core annotation.
supported_by:
- reference_id: PMID:18591255
supporting_text: "Disruption of a survivin-Ran complex does not affect the
assembly of survivin within the chromosomal passenger complex"
- term:
id: GO:0051087
label: protein-folding chaperone binding
evidence_type: IPI
original_reference_id: PMID:18086682
review:
summary: >-
Publication not available for detailed review.
action: UNDECIDED
reason: >-
Unable to access publication to evaluate Hsp60 interaction relevance.
supported_by:
- reference_id: PMID:18086682
supporting_text: 2007 Dec 17. Hsp60 regulation of tumor cell
apoptosis.
- term:
id: GO:0031503
label: protein-containing complex localization
evidence_type: IMP
original_reference_id: PMID:16239925
review:
summary: >-
Survivin mediates CPC targeting to centromeres and midbody [PMID:16239925].
action: ACCEPT
reason: >-
Core function - survivin directs CPC localization.
supported_by:
- reference_id: PMID:16239925
supporting_text: "Survivin mediates targeting of the chromosomal passenger
complex to the centromere and midbody."
- term:
id: GO:0000775
label: chromosome, centromeric region
evidence_type: IDA
original_reference_id: PMID:11084331
review:
summary: >-
Centromeric localization demonstrated in foundational study.
action: ACCEPT
reason: >-
Core CPC localization.
supported_by:
- reference_id: PMID:11084331
supporting_text: Survivin and the inner centromere protein INCENP show
similar cell-cycle localization and gene knockout phenotype.
- term:
id: GO:0030496
label: midbody
evidence_type: IDA
original_reference_id: PMID:11084331
review:
summary: >-
Midbody localization demonstrated in foundational study.
action: ACCEPT
reason: >-
Core CPC localization during cytokinesis.
supported_by:
- reference_id: PMID:11084331
supporting_text: Survivin and the inner centromere protein INCENP show
similar cell-cycle localization and gene knockout phenotype.
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular
Location vocabulary mapping
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000054
title: Gene Ontology annotation based on curation of intracellular
localizations of expressed fusion proteins
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning
models
findings: []
- id: PMID:10949038
title: Crystal structure and mutagenic analysis of the
inhibitor-of-apoptosis protein survivin.
findings:
- statement: Crystal structure reveals survivin forms homodimer with
intermolecular zinc coordination
- statement: Dimerization and Asp-71 surface required for anti-apoptotic
activity
- id: PMID:11084331
title: Survivin and the inner centromere protein INCENP show similar
cell-cycle localization and gene knockout phenotype.
findings:
- statement: Survivin localizes to centromeres, spindle midzone, and
midbody during mitosis
- id: PMID:14610074
title: Aurora-B phosphorylation in vitro identifies a residue of survivin
that is essential for its localization and binding to inner centromere
protein (INCENP) in vivo.
findings:
- statement: Aurora B phosphorylates survivin at Thr-117
- statement: Phosphorylation affects INCENP interaction and chromosome
localization
- id: PMID:15260989
title: The chromosomal passenger complex is required for chromatin-induced
microtubule stabilization and spindle assembly.
findings:
- statement: CPC containing survivin is essential for spindle assembly
- statement: Regulates MCAK activity to permit spindle formation
- id: PMID:15665297
title: cIAP1 Localizes to the nuclear compartment and modulates the cell
cycle.
findings:
- statement: Survivin and cIAP1 both localize to midbody microtubules at
telophase
- statement: cIAP1-survivin interaction during mitosis
- id: PMID:16239925
title: Survivin mediates targeting of the chromosomal passenger complex to
the centromere and midbody.
findings:
- statement: Survivin is critical for CPC localization to centromeres and
midbody
- id: PMID:16291752
title: Molecular analysis of survivin isoforms - evidence that alternatively
spliced variants do not play a role in mitosis.
findings:
- statement: Splice variants have reduced borealin affinity and do not
localize with CPC
- statement: Only wild-type survivin can rescue proliferation after RNAi
depletion
- id: PMID:16322459
title: Chromosome alignment and segregation regulated by ubiquitination of
survivin.
findings:
- statement: Survivin ubiquitination regulates centromere association
- statement: Required for proper chromosome segregation
- id: PMID:16344111
title: Survivin - a protein with dual roles in mitosis and apoptosis.
findings:
- statement: Review establishing survivin's dual roles in cell division
and apoptosis inhibition
- id: PMID:17956729
title: Structure of a Survivin-Borealin-INCENP core complex reveals how
chromosomal passengers travel together.
findings:
- statement: 1.4 A crystal structure of CPC regulatory core
- statement: Survivin, borealin, and INCENP form tight three-helical
bundle
- statement: Complex creates composite surface essential for central
spindle/midbody localization
- id: PMID:18591255
title: A survivin-ran complex regulates spindle formation in tumor cells.
findings:
- statement: Survivin associates with RAN-GTP
- statement: Complex delivers TPX2 to microtubules for spindle assembly
- statement: Function preferentially exploited in tumor cells
- id: PMID:20627126
title: Expression analysis suggests a potential cytoprotective role of Birc5
in the inner ear.
findings:
- statement: Survivin expressed in cochlear cell types critical for
hearing
- statement: Noise exposure upregulates survivin expression
- statement: Cytoprotective activity against gentamicin ototoxicity
- id: PMID:21364656
title: An otoprotective role for the apoptosis inhibitor protein survivin.
findings:
- statement: Survivin protects against ototoxin-induced cell death
- statement: Detectable as cytoplasmic and nuclear protein in cochlea
- id: PMID:21536684
title: Survivin monomer plays an essential role in apoptosis regulation.
findings:
- statement: Survivin monomer interacts with XIAP and SMAC/DIABLO
- statement: Monomer protects against caspase-dependent apoptosis through
these interactions
- statement: Only dimeric form enhances tubulin stability
- id: PMID:9859993
title: Control of apoptosis and mitotic spindle checkpoint by survivin.
findings: []
- id: PMID:17099693
title: The Survivin-Crm1 interaction is essential for chromosomal passenger
complex localization and function.
findings: []
- id: PMID:17681274
title: "Cell death in leukemia: passenger protein regulation by topoisomerase
inhibitors."
findings: []
- id: PMID:18086682
title: Hsp60 regulation of tumor cell apoptosis.
findings: []
- id: PMID:18243099
title: Mps1 phosphorylates Borealin to control Aurora B activity and
chromosome alignment.
findings: []
- id: PMID:19357306
title: A single amino acid change converts Aurora-A into Aurora-B-like
kinase in terms of partner specificity and cellular function.
findings: []
- id: PMID:20638385
title: Interaction of Beclin 1 with survivin regulates sensitivity of human
glioma cells to TRAIL-induced apoptosis.
findings: []
- id: PMID:20739936
title: Phosphorylation of the CPC by Cdk1 promotes chromosome
bi-orientation.
findings: []
- id: PMID:20826784
title: Acetylation directs survivin nuclear localization to repress STAT3
oncogenic activity.
findings: []
- id: PMID:21051298
title: Spatio-temporal composition of the mitotic Chromosomal Passenger
Complex detected using in situ proximity ligation assay.
findings: []
- id: PMID:21225229
title: PAR, a protein involved in the cell cycle, is functionally related to
chromosomal passenger proteins.
findings: []
- id: PMID:21988832
title: Toward an understanding of the protein interaction network of the
human liver.
findings: []
- id: PMID:23251006
title: Impairment of glioma stem cell survival and growth by a novel
inhibitor for Survivin-Ran protein complex.
findings: []
- id: PMID:23825075
title: Renal uptake of the antiapoptotic protein survivin is mediated by
megalin at the apical membrane of the proximal tubule.
findings: []
- id: PMID:24571573
title: The GAR domain of GAS2L3 mediates binding to the chromosomal
passenger complex and is required for localization of GAS2L3 to the
constriction zone during abscission.
findings: []
- id: PMID:25778398
title: The Proapoptotic F-box Protein Fbxl7 Regulates Mitochondrial Function
by Mediating the Ubiquitylation and Proteasomal Degradation of Survivin.
findings: []
- id: PMID:27332895
title: Aurora-C Interactions with Survivin and INCENP Reveal Shared and
Distinct Features Compared with Aurora-B Chromosome Passenger Protein
Complex.
findings: []
- id: PMID:28218735
title: Aurora kinase A regulates Survivin stability through targeting FBXL7
in gastric cancer drug resistance and prognosis.
findings: []
- id: PMID:28514442
title: Architecture of the human interactome defines protein communities and
disease networks.
findings: []
- id: PMID:29568061
title: An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping
of protein interactions and subcellular localizations.
findings: []
- id: PMID:32296183
title: A reference map of the human binary protein interactome.
findings: []
- id: PMID:32814053
title: Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the
human interactome.
findings: []
- id: Reactome:R-HSA-8956026
title: Reactome pathway annotation
findings: []
- id: Reactome:R-HSA-4655355
title: SUMOylation of the CPC
findings: []
- id: Reactome:R-HSA-6790036
title: Reactome mitosis pathway
findings: []
- id: Reactome:R-HSA-6797763
title: TP53 regulation of BIRC5
findings: []
- id: Reactome:R-HSA-141409
title: Spindle checkpoint signaling
findings: []
- id: Reactome:R-HSA-141422
title: Spindle checkpoint
findings: []
- id: Reactome:R-HSA-141431
title: Spindle checkpoint pathway
findings: []
- id: Reactome:R-HSA-141439
title: Spindle checkpoint signaling
findings: []
- id: Reactome:R-HSA-1638803
title: Cohesin phosphorylation
findings: []
- id: Reactome:R-HSA-1638821
title: Mitotic pathway
findings: []
- id: Reactome:R-HSA-2467809
title: Separase/cohesin cleavage
findings: []
- id: Reactome:R-HSA-2467811
title: Sister chromatid separation
findings: []
- id: Reactome:R-HSA-2468287
title: CDK1 phosphorylation of sororin
findings: []
- id: Reactome:R-HSA-2484822
title: Kinetochore assembly
findings: []
- id: Reactome:R-HSA-375302
title: Kinetochore capture
findings: []
- id: Reactome:R-HSA-5666129
title: Mitosis pathway
findings: []
- id: Reactome:R-HSA-5666160
title: Cell cycle pathway
findings: []
- id: Reactome:R-HSA-5666169
title: Mitotic pathway
findings: []
- id: Reactome:R-HSA-9648114
title: Mitotic spindle pathway
findings: []
- id: file:human/BIRC5/BIRC5-deep-research-falcon.md
title: Deep research report on BIRC5
findings: []
core_functions:
- molecular_function:
id: GO:0019899
label: enzyme binding
in_complex:
id: GO:0032133
label: chromosome passenger complex
directly_involved_in:
- id: GO:0007059
label: chromosome segregation
- id: GO:0000281
label: mitotic cytokinesis
description: >-
Survivin is an essential structural component of the chromosomal passenger complex
(CPC),
forming a triple-helix bundle with INCENP and borealin that anchors and regulates
the
Aurora B kinase. As a CPC component, survivin is essential for proper chromosome
segregation
during mitosis and mediates CPC targeting to the midbody for cytokinesis completion.
- molecular_function:
id: GO:0031267
label: small GTPase binding
directly_involved_in:
- id: GO:0090307
label: mitotic spindle assembly
description: >-
Through interaction with RAN-GTP, survivin participates in spindle assembly
by delivering
TPX2 to microtubules.
proposed_new_terms: []
suggested_questions:
- question: >-
What is the precise mechanism by which survivin contributes to anti-apoptotic
activity?
Is it entirely through XIAP potentiation and SMAC sequestration, or are there
additional
direct mechanisms?
- question: >-
Do the splice variants (survivin-2B, survivin-DeltaEx3) have any physiological
function
or are they non-functional products of alternative splicing?
- question: >-
What determines the balance between survivin's mitotic and potential apoptotic
functions
in different cellular contexts?
suggested_experiments:
- description: >-
Structure-function studies with BIR domain mutants that specifically disrupt
caspase
binding without affecting CPC assembly to determine direct vs. indirect anti-apoptotic
mechanisms.
- description: >-
Isoform-specific knockdown/rescue experiments to determine if splice variants
have
any non-mitotic functions.