CBLIF

UniProt ID: P27352
Organism: Homo sapiens
Review Status: INITIALIZED
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Gene Description

CBLIF (gastric intrinsic factor, GIF; also called intrinsic factor, IF) is a secreted cobalamin (vitamin B12)-binding glycoprotein produced by gastric parietal cells (and, at the margins of gastric anatomical regions, by some chief and enteroendocrine cells). Its principal role is the intestinal absorption of dietary cobalamin: after cobalamin is released from salivary/gastric haptocorrin in the proximal small intestine, CBLIF binds it tightly, and the resulting CBLIF-cobalamin complex is recognized in the distal ileum by the cubam receptor formed by cubilin (CUBN) and amnionless (AMN). Cubam mediates receptor-dependent endocytosis of the complex, which is then delivered to lysosomes where cobalamin is released for cellular use. Structurally CBLIF is a two-domain alpha6/alpha6 barrel protein that binds one cobalamin at the domain interface in a base-on conformation. It is not an enzyme; it functions as a cobalamin-binding carrier and as the ligand recognized by the cubam cargo receptor. Loss-of-function mutations cause hereditary intrinsic factor deficiency (congenital/juvenile pernicious anemia; MIM:261000), a form of megaloblastic anemia resulting from vitamin B12 malabsorption.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005576 extracellular region
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetic (IBA) annotation placing CBLIF in the extracellular region. CBLIF is a secreted protein that acts extracellularly (in the gut lumen / on the intestinal apical surface) to bind and deliver cobalamin, so this is correct and part of the core biology.
Reason: UniProt records the protein as secreted, and it functions extracellularly as a cobalamin carrier. The IBA call is consistent with experimental localization and the known biology.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0015889 cobalamin transport
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetic (IBA) annotation to cobalamin transport. CBLIF is required for intestinal absorption of dietary cobalamin, binding it and mediating cubam(CUBN/AMN)-dependent uptake in the ileum. This is a core biological process for the gene.
Reason: Supported experimentally by human loss-of-function disease (hereditary IF deficiency) and by the well-established IF-cobalamin/cubam absorption pathway. Correct and core.
Supporting Evidence:
PMID:20237569
This occurs by the combined action of the gastric intrinsic factor (IF) and the ileal endocytic cubam receptor formed by the 460-kilodalton (kDa) protein cubilin and the 45-kDa transmembrane protein amnionless.
file:human/CBLIF/CBLIF-uniprot.txt
Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis.
GO:0031419 cobalamin binding
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetic (IBA) annotation to cobalamin binding, the defining molecular function of CBLIF. This is directly supported by the crystal structure of the human IF-cobalamin complex and by defined cobalamin-contacting residues in UniProt.
Reason: Cobalamin binding is the core molecular function of intrinsic factor, confirmed by structural and biochemical evidence. The IBA call is at the correct level of specificity.
Supporting Evidence:
PMID:17954916
the Cbl is bound at the interface of the domains in a base-on conformation
GO:0005576 extracellular region
IEA
GO_REF:0000044
ACCEPT
Summary: Electronic annotation to extracellular region derived from the UniProt "Secreted" subcellular location keyword mapping. Consistent with the experimental and phylogenetic evidence for a secreted protein.
Reason: Redundant with the IBA/IDA extracellular-region calls but correct; the SubCell mapping accurately reflects the secreted nature of the protein.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0015889 cobalamin transport
IEA
GO_REF:0000002
ACCEPT
Summary: InterPro2GO electronic annotation (IPR002157, cobalamin-binding protein) to cobalamin transport. Consistent with the experimentally supported transport role.
Reason: The InterPro family mapping is biologically appropriate for CBLIF and matches the experimental IMP/IBA/TAS annotations to the same process.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum.
GO:0031419 cobalamin binding
IEA
GO_REF:0000002
ACCEPT
Summary: InterPro2GO electronic annotation (IPR002157) to cobalamin binding. Matches the structurally validated core molecular function.
Reason: The cobalamin-binding domain assignment is correct for CBLIF and the mapped MF term is the defining function, corroborated by crystallography (PMID:17954916).
Supporting Evidence:
PMID:17954916
The structure of intrinsic factor (IF) in complex with cobalamin (Cbl) was determined at 2.6-A resolution.
GO:0005515 protein binding
IPI
PMID:20237569
Structural basis for receptor recognition of vitamin-B(12)-i...
MARK AS OVER ANNOTATED
Summary: IPI annotation to the generic term protein binding, capturing the interaction with cubilin (CUBN, IntAct O60494). This interaction is real and functionally central (the IF-Cbl complex is recognized by the CUBN/AMN cubam receptor for ileal uptake), and is structurally defined. However, the bare "protein binding" term is uninformative about the actual function.
Reason: Per curation guidance, the uninformative "protein binding" term should not be treated as a core function even though the underlying CUBN interaction is genuine. The functional content of this interaction is better represented by the cobalamin-transport process and the cargo receptor ligand activity annotations, and by the specific CUBN partner recorded in UniProt SUBUNIT.
Supporting Evidence:
PMID:20237569
how two distant CUB domains embrace the Cbl molecule by binding the two IF domains in a Ca(2+)-dependent manner
file:human/CBLIF/CBLIF-uniprot.txt
Interacts with CUBN (via CUB domains).
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
MARK AS OVER ANNOTATED
Summary: IPI annotation to protein binding from the HuRI high-throughput binary (yeast two-hybrid) interactome screen. The recorded partners (FFAR2, SLC13A4, SLC22A23, SLC7A1, SLC7A14, TMEM237) are membrane transporters/GPCRs with no established biological relationship to a secreted cobalamin-binding protein.
Reason: These are uninformative large-scale screen hits and the bare "protein binding" term conveys no functional information; they are very unlikely to reflect physiological partners of a secreted extracellular Cbl carrier. Marked as over-annotated rather than removed, per policy for IPI protein-binding annotations.
Supporting Evidence:
PMID:32296183
reference interactome map of human binary protein interactions
GO:0015889 cobalamin transport
TAS
Reactome:R-HSA-9758881
ACCEPT
Summary: Reactome TAS annotation to cobalamin transport, from the "Uptake of dietary cobalamins into enterocytes" pathway. CBLIF binds dietary cobalamin and delivers it to the ileal cubam receptor for absorption; this is the core process.
Reason: Reactome's pathway representation accurately captures CBLIF's role in the intestinal cobalamin absorption pathway, consistent with experimental (IMP) and phylogenetic (IBA) annotations.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum.
GO:0140355 cargo receptor ligand activity
EXP
PMID:17954916
Crystal structure of human intrinsic factor: cobalamin compl...
ACCEPT
Summary: Experimental annotation to cargo receptor ligand activity. The cobalamin-loaded CBLIF complex is the ligand recognized by the cubam (CUBN/AMN) cargo receptor, which then internalizes it by endocytosis in the ileum. This captures the receptor-recognition facet of CBLIF's transport function.
Reason: Structural work shows CUBN recognizes the Cbl-saturated IF complex, and the complex is taken up by receptor-mediated endocytosis; "cargo receptor ligand activity" is the appropriate MF for a secreted carrier ligand that engages an endocytic receptor. This is an informative, core molecular function.
Supporting Evidence:
PMID:17954916
CUB recognizes both the full-length Cbl-saturated IF complex and the Cbl-saturated cleaved IF complex but not the isolated
file:human/CBLIF/CBLIF-uniprot.txt
After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3000103
ACCEPT
Summary: Reactome TAS localization to extracellular region for the reaction in which the cubam (CUBN:AMN) receptor binds the secreted CBLIF:RCbl complex. Correct for a secreted protein acting on the intestinal luminal/apical surface.
Reason: Consistent with the secreted subcellular location and with the other extracellular annotations.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3000120
ACCEPT
Summary: Reactome TAS localization to extracellular region for the reaction "CBLIF binds RCbl" (binding of free cobalamin by secreted intrinsic factor in the intestinal lumen). Correct for the secreted protein.
Reason: Redundant with other extracellular-region calls but accurate; the binding of cobalamin by CBLIF occurs extracellularly in the gut lumen.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3000137
ACCEPT
Summary: Reactome TAS localization to extracellular region for the cubam-mediated uptake reaction. Correct for the secreted CBLIF:RCbl complex engaging the cell-surface receptor prior to internalization.
Reason: Consistent with the secreted nature of the protein and its extracellular site of action.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3296462
ACCEPT
Summary: Reactome TAS localization to extracellular region for the disease reaction "Defective CUBN does not transport GIF:Cbl". The extracellular localization of CBLIF is correct regardless of the disease context.
Reason: Accurate secreted localization; redundant with the other extracellular annotations.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3296477
ACCEPT
Summary: Reactome TAS localization to extracellular region for the disease reaction "Defective AMN does not transport GIF:Cbl". The secreted CBLIF localization is correct.
Reason: Accurate secreted localization; redundant with the other extracellular annotations.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0005576 extracellular region
TAS
Reactome:R-HSA-3315455
ACCEPT
Summary: Reactome TAS localization to extracellular region for the disease reaction "Defective CBLIF does not bind Cbl". The secreted CBLIF localization is correct.
Reason: Accurate secreted localization; redundant with the other extracellular annotations.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
GO:0043202 lysosomal lumen
TAS
Reactome:R-HSA-3000137
KEEP AS NON CORE
Summary: Reactome TAS localization to lysosomal lumen. After cubam-mediated endocytosis in the ileal enterocyte, the CBLIF:RCbl complex is delivered to lysosomes, where cobalamin is released and CBLIF is degraded. This is a genuine trafficking endpoint but not the protein's core (secreted, cobalamin-binding) function.
Reason: The lysosomal-lumen localization reflects the fate of the internalized complex in the target enterocyte rather than where CBLIF performs its defining function; retain as a correct but non-core localization.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis.
GO:0043202 lysosomal lumen
TAS
Reactome:R-HSA-3000243
KEEP AS NON CORE
Summary: Reactome TAS localization to lysosomal lumen for the reaction in which a lysosomal protease degrades CBLIF:RCbl to release cobalamin. Same non-core trafficking endpoint as R-HSA-3000137.
Reason: Correct localization of the internalized complex within the enterocyte lysosome, but peripheral to CBLIF's defining secreted cobalamin-binding function.
Supporting Evidence:
file:human/CBLIF/CBLIF-uniprot.txt
After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis.
GO:0005576 extracellular region
IDA
PMID:14695536
A genetic polymorphism in the coding region of the gastric i...
ACCEPT
Summary: IDA localization to extracellular region. Recombinant CBLIF expressed in COS-7 cells was secreted with size, secretion rate, and pepsin sensitivity similar to native IF, supporting the secreted/extracellular localization.
Reason: Direct experimental support for secretion of the protein; core extracellular localization.
Supporting Evidence:
PMID:14695536
The apparent size, secretion rate, and sensitivity to pepsin hydrolysis of the expressed IF were similar to native IF.
GO:0005768 endosome
IDA
PMID:8886952
Human gastric intrinsic factor expression is not restricted ...
KEEP AS NON CORE
Summary: IDA localization to endosome, from immunoelectron microscopy of human gastric mucosa showing highest intrinsic factor antigen density on endocytic (and apical) membranes of parietal cells. Reflects the intracellular biosynthetic/secretory and endocytic compartments in the producing cell rather than the core secreted function.
Reason: A real, experimentally observed localization within intrinsic-factor-producing cells, but peripheral to the protein's defining extracellular cobalamin-binding/transport role.
Supporting Evidence:
PMID:8886952
Immunoelectron microscopy demonstrated the highest antigen density on endocytic and apical membranes of parietal cells.
GO:0005902 microvillus
IDA
PMID:8886952
Human gastric intrinsic factor expression is not restricted ...
KEEP AS NON CORE
Summary: IDA localization to microvillus, from the same immuno-localization study of intrinsic factor in gastric mucosa. Represents cell-surface/apical membrane localization in the producing parietal cell; non-core relative to the secreted function.
Reason: Experimentally observed apical/microvillar membrane association in parietal cells; correct but peripheral to CBLIF's core secreted cobalamin-binding/transport function.
Supporting Evidence:
PMID:8886952
Immunoelectron microscopy demonstrated the highest antigen density on endocytic and apical membranes of parietal cells.
GO:0015889 cobalamin transport
IMP
PMID:15738392
Hereditary juvenile cobalamin deficiency caused by mutations...
ACCEPT
Summary: IMP annotation to cobalamin transport based on human genetics: biallelic nonsense and missense GIF (CBLIF) mutations cause hereditary intrinsic factor deficiency with juvenile megaloblastic anemia due to intestinal cobalamin malabsorption. This is the strongest experimental support for CBLIF's role in cobalamin transport/absorption.
Reason: Loss-of-function mutations abolishing intestinal cobalamin absorption directly demonstrate CBLIF's requirement for cobalamin transport; core process.
Supporting Evidence:
PMID:15738392
harbored homozygous nonsense and missense mutations in these four families and in three additional families. The disease in these cases therefore should be classified as hereditary IF deficiency.
GO:0016324 apical plasma membrane
IDA
PMID:8886952
Human gastric intrinsic factor expression is not restricted ...
KEEP AS NON CORE
Summary: IDA localization to apical plasma membrane, from immunoelectron microscopy showing highest intrinsic factor antigen density on apical (and endocytic) membranes of gastric parietal cells. Reflects the apical secretory surface of the producing cell.
Reason: Experimentally supported apical membrane association in parietal cells; a correct but non-core localization relative to the secreted extracellular function.
Supporting Evidence:
PMID:8886952
Immunoelectron microscopy demonstrated the highest antigen density on endocytic and apical membranes of parietal cells.
GO:0031419 cobalamin binding
IDA
PMID:14695536
A genetic polymorphism in the coding region of the gastric i...
ACCEPT
Summary: IDA annotation to cobalamin binding, the defining molecular function of CBLIF, assessed for recombinant IF (studied in the context of the congenital IF deficiency-associated Q23R variant). Directly corroborated by the crystal structure of the IF-cobalamin complex.
Reason: Cobalamin binding is CBLIF's core molecular function, supported here by direct assay of the recombinant protein and by structural evidence (PMID:17954916).
Supporting Evidence:
PMID:14695536
The apparent size, secretion rate, and sensitivity to pepsin hydrolysis of the expressed IF were similar to native IF.
PMID:17954916
the Cbl is bound at the interface of the domains in a base-on conformation

Core Functions

Binds dietary cobalamin (vitamin B12) as a secreted carrier and functions as the ligand recognized by the ileal cubam (CUBN/AMN) cargo receptor, thereby mediating receptor-dependent intestinal absorption of cobalamin.

Molecular Function:
cobalamin binding
Directly Involved In:
Cellular Locations:
Supporting Evidence:
  • PMID:17954916
    the Cbl is bound at the interface of the domains in a base-on conformation
  • PMID:15738392
    harbored homozygous nonsense and missense mutations in these four families and in three additional families. The disease in these cases therefore should be classified as hereditary IF deficiency.
  • file:human/CBLIF/CBLIF-uniprot.txt
    Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis.

Acts as the cargo ligand for the ileal endocytic cubam receptor: the cobalamin-loaded CBLIF complex is recognized by CUBN/AMN and internalized by receptor-mediated endocytosis, coupling cobalamin binding to its cellular uptake.

Directly Involved In:
Cellular Locations:
Supporting Evidence:
  • PMID:20237569
    This occurs by the combined action of the gastric intrinsic factor (IF) and the ileal endocytic cubam receptor formed by the 460-kilodalton (kDa) protein cubilin and the 45-kDa transmembrane protein amnionless.
  • PMID:17954916
    CUB recognizes both the full-length Cbl-saturated IF complex and the Cbl-saturated cleaved IF complex but not the isolated

References

Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
A genetic polymorphism in the coding region of the gastric intrinsic factor gene (GIF) is associated with congenital intrinsic factor deficiency.
Hereditary juvenile cobalamin deficiency caused by mutations in the intrinsic factor gene.
Crystal structure of human intrinsic factor: cobalamin complex at 2.6-A resolution.
Structural basis for receptor recognition of vitamin-B(12)-intrinsic factor complexes.
A reference map of the human binary protein interactome.
Human gastric intrinsic factor expression is not restricted to parietal cells.
file:human/CBLIF/CBLIF-uniprot.txt
UniProtKB entry P27352 (IF_HUMAN), Cobalamin binding intrinsic factor
Reactome:R-HSA-3000103
CUBN:AMN binds CBLIF:RCbl
Reactome:R-HSA-3000120
CBLIF binds RCbl
Reactome:R-HSA-3000137
CUBN:AMN-mediated CBLIF:RCbl uptake and delivery to lysosome
Reactome:R-HSA-3000243
Unknown lysosomal protease degrades CBLIF:RCbl to release Cbl
Reactome:R-HSA-3296462
Defective CUBN does not transport GIF:Cbl
Reactome:R-HSA-3296477
Defective AMN does not transport GIF:Cbl
Reactome:R-HSA-3315455
Defective CBLIF does not bind Cbl
Reactome:R-HSA-9758881
Uptake of dietary cobalamins into enterocytes

πŸ“š Additional Documentation

Notes

(CBLIF-notes.md)

CBLIF (Gastric intrinsic factor / GIF) β€” review notes

UniProtKB:P27352 (IF_HUMAN). HGNC:4268. Synonyms: GIF, IFMH. NCBITaxon:9606.

Summary of function

CBLIF is the secreted cobalamin (vitamin B12)-binding glycoprotein produced by
gastric parietal cells (and, at anatomical margins, some chief/enteroendocrine cells).
Its core function is to bind dietary cobalamin in the small intestine and to mediate
its receptor-dependent absorption in the distal ileum
. The IF–cobalamin complex is taken
up by the ileal cubam receptor (cubilin/CUBN + amnionless/AMN) via receptor-mediated
endocytosis; the complex is delivered to lysosomes where Cbl is released. CBLIF is NOT an
enzyme. Loss of function causes hereditary intrinsic factor deficiency (IFD, MIM:261000),
a form of juvenile/congenital pernicious anemia presenting as megaloblastic anemia from B12
malabsorption.

Key provenance

  • FUNCTION: [file:human/CBLIF/CBLIF-uniprot.txt "Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis."]
  • SUBUNIT: [file:human/CBLIF/CBLIF-uniprot.txt "Interacts with CUBN (via CUB domains)."]
  • SUBCELLULAR LOCATION: Secreted [file:human/CBLIF/CBLIF-uniprot.txt "SUBCELLULAR LOCATION: Secreted."]
  • TISSUE SPECIFICITY: Gastric mucosa [file:human/CBLIF/CBLIF-uniprot.txt "TISSUE SPECIFICITY: Gastric mucosa."]
  • DISEASE IFD: megaloblastic anemia [file:human/CBLIF/CBLIF-uniprot.txt "Autosomal recessive disorder characterized by megaloblastic anemia."]
  • SIMILARITY: eukaryotic cobalamin transport proteins family (with TCN1 haptocorrin / TCN2 transcobalamin).
  • Cbl-binding residues (BINDING features): 171, 222, 270, 365-370, 386-395; C-terminal beta-domain essential for retention.

Literature

  • PMID:17954916 (Mathews et al. 2007, PNAS) β€” crystal structure of human IF:Cbl at 2.6 Γ…; alpha6/alpha6 barrel two-domain protein; Cbl bound base-on at domain interface. Basis of Reactome's EXP cargo receptor ligand activity and cobalamin binding calls. PMID:17954916 and PMID:17954916. Also describes the CUB(N) receptor recognition: PMID:17954916.

  • PMID:20237569 (Andersen et al. 2010, Nature) β€” crystal structure of IF:Cbl bound to cubilin CUB(5-8); defines how the cubam receptor recognizes the IF-Cbl complex. Source of the CUBN IPI (IntAct O60494). Abstract-only in cache. Abstract: PMID:20237569 and PMID:20237569.

  • PMID:15738392 (Tanner et al. 2005, PNAS) β€” biallelic GIF mutations (nonsense/missense) cause hereditary IF deficiency; distinct from Imerslund-Grasbeck (CUBN/AMN). IMP evidence for role in cobalamin transport/absorption. PMID:15738392

  • PMID:14695536 (Gordon et al. 2004, Hum Mutat) β€” Gln5β†’Arg (mature Q23R) coding polymorphism associated with congenital IF deficiency; recombinant IF expressed/secreted from COS-7 with native size, secretion rate, pepsin sensitivity. Supports secreted localization and Cbl binding of the expressed protein. PMID:14695536

  • PMID:8886952 (Howard et al. 1996, J Anat) β€” immuno-localization of human IF; parietal cells are the main source but expression is not restricted to them. Immunoelectron microscopy: highest antigen density on endocytic and apical membranes of parietal cells; also secretory granules. IDA support for endosome / microvillus / apical plasma membrane localization in the producing cell. PMID:8886952

  • PMID:32296183 (Luck et al. 2020, Nature) β€” HuRI high-throughput binary (Y2H) interactome. Source of several IPI protein binding calls (FFAR2, SLC13A4, SLC22A23, SLC7A1, SLC7A14, TMEM237). These are large-scale screen hits with no established biological role for a secreted Cbl-binding protein; treat as uninformative protein binding over-annotations, not true partners.

Curation decisions (high level)

  • MF cobalamin binding (GO:0031419): CORE. Multiple lines (IDA/IBA/IEA, crystal structures). ACCEPT.
  • BP cobalamin transport (GO:0015889): CORE. IMP (disease), IBA, TAS(Reactome), IEA. ACCEPT.
  • CC extracellular region (GO:0005576): CORE (secreted). ACCEPT IBA/IDA; IEA/TAS ACCEPT.
  • MF cargo receptor ligand activity (GO:0140355) EXP/Reactome: the IF-Cbl complex is the ligand recognized by the cubam cargo receptor β€” biologically apt; ACCEPT (this is essentially the receptor-recognition facet of its transport role).
  • CC endosome / microvillus / apical plasma membrane (IDA, PMID:8886952): localizations in the producing parietal cell / uptake compartments; not the core secreted function but real. KEEP_AS_NON_CORE.
  • CC lysosomal lumen (TAS Reactome): the IF-Cbl complex is delivered to lysosomes in the enterocyte for degradation/Cbl release; real trafficking endpoint, non-core. KEEP_AS_NON_CORE.
  • MF protein binding (GO:0005515) IPI: CUBN (PMID:20237569) is the real, functionally central partner but the bare protein binding term is uninformative β†’ MARK_AS_OVER_ANNOTATED (per policy, not REMOVE). HuRI hits (PMID:32296183) β†’ MARK_AS_OVER_ANNOTATED (uninformative screen hits).

πŸ“„ View Raw YAML

id: P27352
gene_symbol: CBLIF
product_type: PROTEIN
status: INITIALIZED
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: >-
  CBLIF (gastric intrinsic factor, GIF; also called intrinsic factor, IF) is a secreted
  cobalamin (vitamin B12)-binding glycoprotein produced by gastric parietal cells (and,
  at the margins of gastric anatomical regions, by some chief and enteroendocrine cells).
  Its principal role is the intestinal absorption of dietary cobalamin: after cobalamin is
  released from salivary/gastric haptocorrin in the proximal small intestine, CBLIF binds
  it tightly, and the resulting CBLIF-cobalamin complex is recognized in the distal ileum
  by the cubam receptor formed by cubilin (CUBN) and amnionless (AMN). Cubam mediates
  receptor-dependent endocytosis of the complex, which is then delivered to lysosomes where
  cobalamin is released for cellular use. Structurally CBLIF is a two-domain alpha6/alpha6
  barrel protein that binds one cobalamin at the domain interface in a base-on conformation.
  It is not an enzyme; it functions as a cobalamin-binding carrier and as the ligand
  recognized by the cubam cargo receptor. Loss-of-function mutations cause hereditary
  intrinsic factor deficiency (congenital/juvenile pernicious anemia; MIM:261000), a form of
  megaloblastic anemia resulting from vitamin B12 malabsorption.
alternative_products:
- name: '1'
  id: P27352-1
- name: '2'
  id: P27352-2
  sequence_note: VSP_041585
existing_annotations:
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: >-
      Phylogenetic (IBA) annotation placing CBLIF in the extracellular region. CBLIF is a
      secreted protein that acts extracellularly (in the gut lumen / on the intestinal
      apical surface) to bind and deliver cobalamin, so this is correct and part of the
      core biology.
    action: ACCEPT
    reason: >-
      UniProt records the protein as secreted, and it functions extracellularly as a
      cobalamin carrier. The IBA call is consistent with experimental localization and the
      known biology.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0015889
    label: cobalamin transport
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: >-
      Phylogenetic (IBA) annotation to cobalamin transport. CBLIF is required for intestinal
      absorption of dietary cobalamin, binding it and mediating cubam(CUBN/AMN)-dependent
      uptake in the ileum. This is a core biological process for the gene.
    action: ACCEPT
    reason: >-
      Supported experimentally by human loss-of-function disease (hereditary IF deficiency)
      and by the well-established IF-cobalamin/cubam absorption pathway. Correct and core.
    supported_by:
    - reference_id: PMID:20237569
      supporting_text: >-
        This occurs by the combined action of the gastric intrinsic factor (IF) and the
        ileal endocytic cubam receptor formed by the 460-kilodalton (kDa) protein cubilin
        and the 45-kDa transmembrane protein amnionless.
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After
        interaction with CUBN, the CBLIF-cobalamin complex is internalized via
        receptor-mediated endocytosis.
- term:
    id: GO:0031419
    label: cobalamin binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    summary: >-
      Phylogenetic (IBA) annotation to cobalamin binding, the defining molecular function of
      CBLIF. This is directly supported by the crystal structure of the human IF-cobalamin
      complex and by defined cobalamin-contacting residues in UniProt.
    action: ACCEPT
    reason: >-
      Cobalamin binding is the core molecular function of intrinsic factor, confirmed by
      structural and biochemical evidence. The IBA call is at the correct level of
      specificity.
    supported_by:
    - reference_id: PMID:17954916
      supporting_text: >-
        the Cbl is bound at the interface of the domains in a base-on conformation
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: >-
      Electronic annotation to extracellular region derived from the UniProt "Secreted"
      subcellular location keyword mapping. Consistent with the experimental and
      phylogenetic evidence for a secreted protein.
    action: ACCEPT
    reason: >-
      Redundant with the IBA/IDA extracellular-region calls but correct; the SubCell mapping
      accurately reflects the secreted nature of the protein.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0015889
    label: cobalamin transport
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: involved_in
  review:
    summary: >-
      InterPro2GO electronic annotation (IPR002157, cobalamin-binding protein) to cobalamin
      transport. Consistent with the experimentally supported transport role.
    action: ACCEPT
    reason: >-
      The InterPro family mapping is biologically appropriate for CBLIF and matches the
      experimental IMP/IBA/TAS annotations to the same process.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum.
- term:
    id: GO:0031419
    label: cobalamin binding
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: enables
  review:
    summary: >-
      InterPro2GO electronic annotation (IPR002157) to cobalamin binding. Matches the
      structurally validated core molecular function.
    action: ACCEPT
    reason: >-
      The cobalamin-binding domain assignment is correct for CBLIF and the mapped MF term is
      the defining function, corroborated by crystallography (PMID:17954916).
    supported_by:
    - reference_id: PMID:17954916
      supporting_text: >-
        The structure of intrinsic factor (IF) in complex with cobalamin (Cbl) was
        determined at 2.6-A resolution.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:20237569
  qualifier: enables
  review:
    summary: >-
      IPI annotation to the generic term protein binding, capturing the interaction with
      cubilin (CUBN, IntAct O60494). This interaction is real and functionally central (the
      IF-Cbl complex is recognized by the CUBN/AMN cubam receptor for ileal uptake), and is
      structurally defined. However, the bare "protein binding" term is uninformative about
      the actual function.
    action: MARK_AS_OVER_ANNOTATED
    reason: >-
      Per curation guidance, the uninformative "protein binding" term should not be treated
      as a core function even though the underlying CUBN interaction is genuine. The
      functional content of this interaction is better represented by the
      cobalamin-transport process and the cargo receptor ligand activity annotations, and by
      the specific CUBN partner recorded in UniProt SUBUNIT.
    supported_by:
    - reference_id: PMID:20237569
      supporting_text: >-
        how two distant CUB domains embrace the Cbl molecule by binding the two IF domains
        in a Ca(2+)-dependent manner
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "Interacts with CUBN (via CUB domains)."
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  qualifier: enables
  review:
    summary: >-
      IPI annotation to protein binding from the HuRI high-throughput binary (yeast
      two-hybrid) interactome screen. The recorded partners (FFAR2, SLC13A4, SLC22A23,
      SLC7A1, SLC7A14, TMEM237) are membrane transporters/GPCRs with no established
      biological relationship to a secreted cobalamin-binding protein.
    action: MARK_AS_OVER_ANNOTATED
    reason: >-
      These are uninformative large-scale screen hits and the bare "protein binding" term
      conveys no functional information; they are very unlikely to reflect physiological
      partners of a secreted extracellular Cbl carrier. Marked as over-annotated rather than
      removed, per policy for IPI protein-binding annotations.
    supported_by:
    - reference_id: PMID:32296183
      supporting_text: >-
        reference interactome map of human binary protein interactions
- term:
    id: GO:0015889
    label: cobalamin transport
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-9758881
  qualifier: involved_in
  review:
    summary: >-
      Reactome TAS annotation to cobalamin transport, from the "Uptake of dietary cobalamins
      into enterocytes" pathway. CBLIF binds dietary cobalamin and delivers it to the ileal
      cubam receptor for absorption; this is the core process.
    action: ACCEPT
    reason: >-
      Reactome's pathway representation accurately captures CBLIF's role in the intestinal
      cobalamin absorption pathway, consistent with experimental (IMP) and phylogenetic
      (IBA) annotations.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum.
- term:
    id: GO:0140355
    label: cargo receptor ligand activity
  evidence_type: EXP
  original_reference_id: PMID:17954916
  qualifier: enables
  review:
    summary: >-
      Experimental annotation to cargo receptor ligand activity. The cobalamin-loaded CBLIF
      complex is the ligand recognized by the cubam (CUBN/AMN) cargo receptor, which then
      internalizes it by endocytosis in the ileum. This captures the receptor-recognition
      facet of CBLIF's transport function.
    action: ACCEPT
    reason: >-
      Structural work shows CUBN recognizes the Cbl-saturated IF complex, and the complex is
      taken up by receptor-mediated endocytosis; "cargo receptor ligand activity" is the
      appropriate MF for a secreted carrier ligand that engages an endocytic receptor. This
      is an informative, core molecular function.
    supported_by:
    - reference_id: PMID:17954916
      supporting_text: >-
        CUB recognizes both the full-length Cbl-saturated IF complex and the Cbl-saturated
        cleaved IF complex but not the isolated
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        After interaction with CUBN, the CBLIF-cobalamin complex is internalized via
        receptor-mediated endocytosis.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3000103
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the reaction in which the cubam
      (CUBN:AMN) receptor binds the secreted CBLIF:RCbl complex. Correct for a secreted
      protein acting on the intestinal luminal/apical surface.
    action: ACCEPT
    reason: >-
      Consistent with the secreted subcellular location and with the other extracellular
      annotations.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3000120
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the reaction "CBLIF binds RCbl"
      (binding of free cobalamin by secreted intrinsic factor in the intestinal lumen).
      Correct for the secreted protein.
    action: ACCEPT
    reason: >-
      Redundant with other extracellular-region calls but accurate; the binding of cobalamin
      by CBLIF occurs extracellularly in the gut lumen.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3000137
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the cubam-mediated uptake
      reaction. Correct for the secreted CBLIF:RCbl complex engaging the cell-surface
      receptor prior to internalization.
    action: ACCEPT
    reason: >-
      Consistent with the secreted nature of the protein and its extracellular site of
      action.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3296462
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the disease reaction "Defective
      CUBN does not transport GIF:Cbl". The extracellular localization of CBLIF is correct
      regardless of the disease context.
    action: ACCEPT
    reason: >-
      Accurate secreted localization; redundant with the other extracellular annotations.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3296477
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the disease reaction "Defective
      AMN does not transport GIF:Cbl". The secreted CBLIF localization is correct.
    action: ACCEPT
    reason: >-
      Accurate secreted localization; redundant with the other extracellular annotations.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3315455
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to extracellular region for the disease reaction "Defective
      CBLIF does not bind Cbl". The secreted CBLIF localization is correct.
    action: ACCEPT
    reason: >-
      Accurate secreted localization; redundant with the other extracellular annotations.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: "SUBCELLULAR LOCATION: Secreted."
- term:
    id: GO:0043202
    label: lysosomal lumen
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3000137
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to lysosomal lumen. After cubam-mediated endocytosis in the
      ileal enterocyte, the CBLIF:RCbl complex is delivered to lysosomes, where cobalamin is
      released and CBLIF is degraded. This is a genuine trafficking endpoint but not the
      protein's core (secreted, cobalamin-binding) function.
    action: KEEP_AS_NON_CORE
    reason: >-
      The lysosomal-lumen localization reflects the fate of the internalized complex in the
      target enterocyte rather than where CBLIF performs its defining function; retain as a
      correct but non-core localization.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        After interaction with CUBN, the CBLIF-cobalamin complex is internalized via
        receptor-mediated endocytosis.
- term:
    id: GO:0043202
    label: lysosomal lumen
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3000243
  qualifier: located_in
  review:
    summary: >-
      Reactome TAS localization to lysosomal lumen for the reaction in which a lysosomal
      protease degrades CBLIF:RCbl to release cobalamin. Same non-core trafficking endpoint
      as R-HSA-3000137.
    action: KEEP_AS_NON_CORE
    reason: >-
      Correct localization of the internalized complex within the enterocyte lysosome, but
      peripheral to CBLIF's defining secreted cobalamin-binding function.
    supported_by:
    - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
      supporting_text: >-
        After interaction with CUBN, the CBLIF-cobalamin complex is internalized via
        receptor-mediated endocytosis.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IDA
  original_reference_id: PMID:14695536
  qualifier: located_in
  review:
    summary: >-
      IDA localization to extracellular region. Recombinant CBLIF expressed in COS-7 cells
      was secreted with size, secretion rate, and pepsin sensitivity similar to native IF,
      supporting the secreted/extracellular localization.
    action: ACCEPT
    reason: >-
      Direct experimental support for secretion of the protein; core extracellular
      localization.
    supported_by:
    - reference_id: PMID:14695536
      supporting_text: >-
        The apparent size, secretion rate, and sensitivity to pepsin hydrolysis of the
        expressed IF were similar to native IF.
- term:
    id: GO:0005768
    label: endosome
  evidence_type: IDA
  original_reference_id: PMID:8886952
  qualifier: located_in
  review:
    summary: >-
      IDA localization to endosome, from immunoelectron microscopy of human gastric mucosa
      showing highest intrinsic factor antigen density on endocytic (and apical) membranes
      of parietal cells. Reflects the intracellular biosynthetic/secretory and endocytic
      compartments in the producing cell rather than the core secreted function.
    action: KEEP_AS_NON_CORE
    reason: >-
      A real, experimentally observed localization within intrinsic-factor-producing cells,
      but peripheral to the protein's defining extracellular cobalamin-binding/transport
      role.
    supported_by:
    - reference_id: PMID:8886952
      supporting_text: >-
        Immunoelectron microscopy demonstrated the highest antigen density on endocytic and
        apical membranes of parietal cells.
- term:
    id: GO:0005902
    label: microvillus
  evidence_type: IDA
  original_reference_id: PMID:8886952
  qualifier: located_in
  review:
    summary: >-
      IDA localization to microvillus, from the same immuno-localization study of intrinsic
      factor in gastric mucosa. Represents cell-surface/apical membrane localization in the
      producing parietal cell; non-core relative to the secreted function.
    action: KEEP_AS_NON_CORE
    reason: >-
      Experimentally observed apical/microvillar membrane association in parietal cells;
      correct but peripheral to CBLIF's core secreted cobalamin-binding/transport function.
    supported_by:
    - reference_id: PMID:8886952
      supporting_text: >-
        Immunoelectron microscopy demonstrated the highest antigen density on endocytic and
        apical membranes of parietal cells.
- term:
    id: GO:0015889
    label: cobalamin transport
  evidence_type: IMP
  original_reference_id: PMID:15738392
  qualifier: involved_in
  review:
    summary: >-
      IMP annotation to cobalamin transport based on human genetics: biallelic nonsense and
      missense GIF (CBLIF) mutations cause hereditary intrinsic factor deficiency with
      juvenile megaloblastic anemia due to intestinal cobalamin malabsorption. This is the
      strongest experimental support for CBLIF's role in cobalamin transport/absorption.
    action: ACCEPT
    reason: >-
      Loss-of-function mutations abolishing intestinal cobalamin absorption directly
      demonstrate CBLIF's requirement for cobalamin transport; core process.
    supported_by:
    - reference_id: PMID:15738392
      supporting_text: >-
        harbored homozygous nonsense and missense mutations in these four families and in
        three additional families. The disease in these cases therefore should be classified
        as hereditary IF deficiency.
- term:
    id: GO:0016324
    label: apical plasma membrane
  evidence_type: IDA
  original_reference_id: PMID:8886952
  qualifier: located_in
  review:
    summary: >-
      IDA localization to apical plasma membrane, from immunoelectron microscopy showing
      highest intrinsic factor antigen density on apical (and endocytic) membranes of gastric
      parietal cells. Reflects the apical secretory surface of the producing cell.
    action: KEEP_AS_NON_CORE
    reason: >-
      Experimentally supported apical membrane association in parietal cells; a correct but
      non-core localization relative to the secreted extracellular function.
    supported_by:
    - reference_id: PMID:8886952
      supporting_text: >-
        Immunoelectron microscopy demonstrated the highest antigen density on endocytic and
        apical membranes of parietal cells.
- term:
    id: GO:0031419
    label: cobalamin binding
  evidence_type: IDA
  original_reference_id: PMID:14695536
  qualifier: enables
  review:
    summary: >-
      IDA annotation to cobalamin binding, the defining molecular function of CBLIF, assessed
      for recombinant IF (studied in the context of the congenital IF deficiency-associated
      Q23R variant). Directly corroborated by the crystal structure of the IF-cobalamin
      complex.
    action: ACCEPT
    reason: >-
      Cobalamin binding is CBLIF's core molecular function, supported here by direct assay of
      the recombinant protein and by structural evidence (PMID:17954916).
    supported_by:
    - reference_id: PMID:14695536
      supporting_text: >-
        The apparent size, secretion rate, and sensitivity to pepsin hydrolysis of the
        expressed IF were similar to native IF.
    - reference_id: PMID:17954916
      supporting_text: >-
        the Cbl is bound at the interface of the domains in a base-on conformation
core_functions:
- description: >-
    Binds dietary cobalamin (vitamin B12) as a secreted carrier and functions as the ligand
    recognized by the ileal cubam (CUBN/AMN) cargo receptor, thereby mediating
    receptor-dependent intestinal absorption of cobalamin.
  molecular_function:
    id: GO:0031419
    label: cobalamin binding
  directly_involved_in:
  - id: GO:0015889
    label: cobalamin transport
  locations:
  - id: GO:0005576
    label: extracellular region
  supported_by:
  - reference_id: PMID:17954916
    supporting_text: >-
      the Cbl is bound at the interface of the domains in a base-on conformation
  - reference_id: PMID:15738392
    supporting_text: >-
      harbored homozygous nonsense and missense mutations in these four families and in
      three additional families. The disease in these cases therefore should be classified
      as hereditary IF deficiency.
  - reference_id: file:human/CBLIF/CBLIF-uniprot.txt
    supporting_text: >-
      Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After
      interaction with CUBN, the CBLIF-cobalamin complex is internalized via
      receptor-mediated endocytosis.
- description: >-
    Acts as the cargo ligand for the ileal endocytic cubam receptor: the cobalamin-loaded
    CBLIF complex is recognized by CUBN/AMN and internalized by receptor-mediated
    endocytosis, coupling cobalamin binding to its cellular uptake.
  molecular_function:
    id: GO:0140355
    label: cargo receptor ligand activity
  directly_involved_in:
  - id: GO:0015889
    label: cobalamin transport
  locations:
  - id: GO:0005576
    label: extracellular region
  supported_by:
  - reference_id: PMID:20237569
    supporting_text: >-
      This occurs by the combined action of the gastric intrinsic factor (IF) and the ileal
      endocytic cubam receptor formed by the 460-kilodalton (kDa) protein cubilin and the
      45-kDa transmembrane protein amnionless.
  - reference_id: PMID:17954916
    supporting_text: >-
      CUB recognizes both the full-length Cbl-saturated IF complex and the Cbl-saturated
      cleaved IF complex but not the isolated
references:
- id: GO_REF:0000002
  title: Gene Ontology annotation through association of InterPro records with GO
    terms
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
    vocabulary mapping, accompanied by conservative changes to GO terms applied by
    UniProt
  findings: []
- id: PMID:14695536
  title: A genetic polymorphism in the coding region of the gastric intrinsic factor
    gene (GIF) is associated with congenital intrinsic factor deficiency.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: >-
      PubMed-verified. Reports the GIF Q5R (mature Q23R) coding polymorphism associated with
      congenital IF deficiency and shows recombinant IF is secreted with native-like
      properties; supports secreted localization and cobalamin binding of the protein.
- id: PMID:15738392
  title: Hereditary juvenile cobalamin deficiency caused by mutations in the intrinsic
    factor gene.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      PubMed-verified. Establishes that biallelic GIF (CBLIF) mutations cause hereditary
      intrinsic factor deficiency (juvenile megaloblastic anemia from B12 malabsorption);
      strong genetic support for CBLIF's role in intestinal cobalamin transport.
- id: PMID:17954916
  title: 'Crystal structure of human intrinsic factor: cobalamin complex at 2.6-A
    resolution.'
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      PubMed-verified. Crystal structure of human IF-cobalamin; establishes cobalamin
      binding at the two-domain interface and discusses CUBN receptor recognition of the
      Cbl-saturated complex.
- id: PMID:20237569
  title: Structural basis for receptor recognition of vitamin-B(12)-intrinsic factor
    complexes.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      PubMed-verified (abstract-only in cache). Crystal structure of the IF-Cbl complex bound
      to cubilin CUB(5-8); source of the CUBN IPI and defines cubam receptor recognition.
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
  reference_review:
    relevance: LOW
    correctness: LOW_QUALITY
    review_notes: >-
      PubMed-verified. HuRI high-throughput binary (Y2H) interactome; the CBLIF hits
      (FFAR2, SLC13A4, SLC22A23, SLC7A1, SLC7A14, TMEM237) are unvalidated screen
      interactions with no established biological role for a secreted Cbl-binding protein.
- id: PMID:8886952
  title: Human gastric intrinsic factor expression is not restricted to parietal cells.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: >-
      PubMed-verified. Immuno-localization of intrinsic factor in human gastric mucosa;
      supports parietal-cell production and apical/endocytic membrane localization; source
      of the endosome/microvillus/apical plasma membrane IDA localizations.
- id: file:human/CBLIF/CBLIF-uniprot.txt
  title: UniProtKB entry P27352 (IF_HUMAN), Cobalamin binding intrinsic factor
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      UniProt curated record; source of the FUNCTION (secreted cobalamin absorption via
      CUBN), SUBUNIT (interacts with CUBN via CUB domains), secreted subcellular location,
      gastric-mucosa tissue specificity, and IFD disease association.
- id: Reactome:R-HSA-3000103
  title: CUBN:AMN binds CBLIF:RCbl
  findings: []
- id: Reactome:R-HSA-3000120
  title: CBLIF binds RCbl
  findings: []
- id: Reactome:R-HSA-3000137
  title: CUBN:AMN-mediated CBLIF:RCbl uptake and delivery to lysosome
  findings: []
- id: Reactome:R-HSA-3000243
  title: Unknown lysosomal protease degrades CBLIF:RCbl to release Cbl
  findings: []
- id: Reactome:R-HSA-3296462
  title: Defective CUBN does not transport GIF:Cbl
  findings: []
- id: Reactome:R-HSA-3296477
  title: Defective AMN does not transport GIF:Cbl
  findings: []
- id: Reactome:R-HSA-3315455
  title: Defective CBLIF does not bind Cbl
  findings: []
- id: Reactome:R-HSA-9758881
  title: Uptake of dietary cobalamins into enterocytes
  findings: []