CKB

UniProt ID: P12277
Organism: Homo sapiens
Review Status: COMPLETE
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Gene Description

CKB encodes the B-type (brain-type) cytosolic creatine kinase, a 381-residue enzyme (EC 2.7.3.2) of the ATP:guanido phosphotransferase (phosphagen kinase) family. It reversibly catalyzes transfer of the high-energy phosphoryl group between ATP and creatine (creatine + ATP = N-phosphocreatine + ADP + H+), interconverting ATP and the phosphocreatine energy reservoir. The active enzyme is a dimer: B-CK assembles into CK-BB homodimers and, with the muscle-type subunit CKM, into CK-MB heterodimers. As the cytosolic limb of the phosphocreatine/creatine-kinase shuttle, B-CK is functionally coupled to ATP-consuming processes (e.g. membrane ion transporters and other ATPases), locally regenerating ATP from phosphocreatine and providing temporal and spatial energy buffering in cells with high, fluctuating energy demands. B-CK is the predominant cytosolic creatine kinase of brain and is broadly expressed in smooth muscle and most non-muscle tissues. Beyond catalysis it acts as an ATP-regenerating partner in membrane microcompartments — for example binding the C-terminal domain of the K-Cl cotransporter KCC3 (SLC12A6) and supporting its transport activity — and is a substrate of the ECS(ASB9) Cullin-RING E3 ubiquitin ligase, which targets it for proteasomal degradation.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005576 extracellular region
IBA
GO_REF:0000033
REMOVE
Summary: Phylogenetic (IBA) inference that B-CK is active in the extracellular region. B-CK is a cytosolic enzyme; it is detected in exosomes/secretome but is not active extracellularly. The "is_active_in extracellular region" call is an over-propagation and is biologically incorrect as a site of activity.
Reason: Creatine kinase catalysis requires cytosolic ATP/ADP and creatine; the enzyme is not known to function in the extracellular region. Detection in secreted vesicles does not make the extracellular region a site of activity, so an "is_active_in extracellular region" assertion is incorrect. Aligned with the parallel CKM review, which REMOVEs the identical IBA annotation; genuine extracellular/exosome detection is retained separately under the extracellular-exosome annotations.
GO:0004111 creatine kinase activity
IBA
GO_REF:0000033
ACCEPT
Summary: Creatine kinase activity is the core molecular function of CKB, supported phylogenetically (IBA) and experimentally. Accept.
Reason: This is the defining, experimentally established activity of CKB (EC 2.7.3.2); the IBA inference is consistent with direct assays.
Supporting Evidence:
PMID:8186255
The results showed residues Cys-283 and Arg-292 are essential for enzyme catalysis.
GO:0046314 phosphocreatine biosynthetic process
IBA
GO_REF:0000033
ACCEPT
Summary: The biological process corresponding to the forward (ATP -> phosphocreatine) direction of the creatine kinase reaction. Core process for CKB. Accept.
Reason: Directly reflects the physiological left-to-right reaction direction catalyzed by CKB; consistent with the experimentally demonstrated activity.
GO:0003824 catalytic activity
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: Generic root catalytic-activity term assigned by InterPro2GO. Correct but uninformative; subsumed by the specific creatine kinase activity annotation.
Reason: A high-level ancestor of GO:0004111; adds no information beyond the specific molecular function and should not be retained as a meaningful annotation.
GO:0004111 creatine kinase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Electronic (IEA) assignment of the core creatine kinase activity, consistent with experimental evidence. Accept (redundant with the experimental annotation but correct).
Reason: Same correct core molecular function; electronic support via RHEA/EC mapping aligns with direct evidence.
GO:0005739 mitochondrion
IEA
GO_REF:0000120
MARK AS OVER ANNOTATED
Summary: Electronic mitochondrion localization transferred by similarity from the mouse ortholog (Q04447) in the context of thermogenic-fat / futile-creatine-cycle biology. Human CKB is predominantly cytosolic; a mitochondrial pool is not directly demonstrated for human B-CK.
Reason: B-CK is the cytosolic creatine kinase isoform; mitochondrial creatine kinase is a distinct gene product (uMtCK/CKMT1). The mitochondrial call is a by-similarity transfer specific to adipocyte thermogenesis and is not the core localization of human CKB.
GO:0005829 cytosol
IEA
GO_REF:0000044
ACCEPT
Summary: Electronic cytosol localization from the UniProt subcellular-location mapping. Correct core localization. Accept.
Reason: B-CK is a cytosolic enzyme; consistent with IDA (HPA) and Reactome TAS annotations to cytosol.
GO:0005886 plasma membrane
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: Electronic plasma-membrane call from UniProt subcellular-location mapping, reflecting peripheral recruitment of B-CK to membrane ATPase microcompartments (e.g. with KCC3). Real but peripheral, not the core compartment.
Reason: CKB is not an integral membrane protein; it is recruited to the membrane to supply ATP to transporters such as KCC3 (PMID:18566107). Retain as a non-core peripheral localization.
GO:0016301 kinase activity
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: Generic kinase-activity parent from InterPro2GO; subsumed by the specific creatine kinase activity. Uninformative.
Reason: Ancestor of GO:0004111; carries no information beyond the specific molecular function.
GO:0016772 transferase activity, transferring phosphorus-containing groups
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: Generic phosphotransferase parent from InterPro2GO; subsumed by the specific creatine kinase activity. Uninformative.
Reason: High-level ancestor of GO:0004111; redundant generic term.
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: The immediate parent class of creatine kinase activity (phosphotransfer to a nitrogenous/guanidino acceptor). Correct but redundant with the specific term.
Reason: Direct ancestor of GO:0004111; the specific creatine kinase activity term is preferred and makes this generic term redundant.
GO:0046314 phosphocreatine biosynthetic process
IEA
GO_REF:0000002
ACCEPT
Summary: Electronic assignment of the core phosphocreatine biosynthetic process, consistent with experimental evidence. Accept.
Reason: Correct core process for CKB; redundant with the IDA/IBA annotations but not erroneous.
GO:0005515 protein binding
IPI
PMID:16189514
Towards a proteome-scale map of the human protein-protein in...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a high-throughput interactome screen. Uninformative as a molecular function; the biologically meaningful interactions are captured by more specific annotations.
Reason: Bare protein binding does not describe a function; retained as non-core evidence of interaction only.
GO:0005515 protein binding
IPI
PMID:19060904
An empirical framework for binary interactome mapping.
KEEP AS NON CORE
Summary: Generic 'protein binding' from a high-throughput binary interactome. Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:19264780
Involvement of creatine kinase B in hepatitis C virus genome...
KEEP AS NON CORE
Summary: Interaction with hepatitis C virus NS4A, recruiting CKB to the viral replication complex. A genuine moonlighting interaction but represented only as generic 'protein binding'.
Reason: Biologically real host-factor interaction (PMID:19264780) but a non-core, condition-specific role; the bare term is uninformative as a core function.
Supporting Evidence:
PMID:19264780
CKB interacts with HCV NS4A protein and forms a complex with NS3-4A, which possesses multiple enzyme activities.
GO:0005515 protein binding
IPI
PMID:21145461
Dynamics of cullin-RING ubiquitin ligase network revealed by...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a cullin-RING ligase network proteomic study (CUL3 association). Uninformative as a function.
Reason: Bare protein binding; relates to CKB's role as a CRL substrate, retained as non-core.
GO:0005515 protein binding
IPI
PMID:25416956
A proteome-scale map of the human interactome network.
KEEP AS NON CORE
Summary: Generic 'protein binding' from a high-throughput interactome map. Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:28514442
Architecture of the human interactome defines protein commun...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a BioPlex interactome (includes CKM and ASB9 partners). Uninformative as a standalone function.
Reason: Bare protein binding; the meaningful partners (CKM dimerization, ASB9 E3 ligase) are better captured specifically. Retained as non-core.
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
KEEP AS NON CORE
Summary: Generic 'protein binding' from the HuRI binary interactome (ASB9). Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a dual proteome-scale interactome (CKM, ASB9). Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:35271311
OpenCell: Endogenous tagging for the cartography of human ce...
KEEP AS NON CORE
Summary: Generic 'protein binding' from the OpenCell endogenous-tagging map. Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:37207277
Using brain cell-type-specific protein interactomes to inter...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a brain cell-type interactome (TCF4, CUL3). Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0005515 protein binding
IPI
PMID:40205054
Multimodal cell maps as a foundation for structural and func...
KEEP AS NON CORE
Summary: Generic 'protein binding' from a multimodal cell-map interactome (ASB9). Uninformative molecular function.
Reason: Bare protein binding is not a core function; retained as non-core.
GO:0140651 futile creatine cycle
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Electronic transfer (from mouse Q04447) of involvement in the futile creatine cycle (adipocyte thermogenesis). This role is characterized for the thermogenic-fat mitochondrial creatine cycle and has not been demonstrated for human B-CK; retain as a non-core, by-similarity possibility.
Reason: The futile creatine cycle is a specialized thermogenic-fat process inferred by orthology; it is plausible but not the core energy-buffering function of cytosolic B-CK in humans.
GO:0005829 cytosol
IDA
GO_REF:0000052
ACCEPT
Summary: Direct immunofluorescence (HPA) localization to the cytosol. This is the core, experimentally supported localization of B-CK. Accept.
Reason: B-CK is a cytosolic enzyme; IDA from HPA directly supports the core localization.
GO:0005739 mitochondrion
ISS
GO_REF:0000024
MARK AS OVER ANNOTATED
Summary: ISS mitochondrion localization transferred from mouse Q04447 (thermogenic-fat creatine cycle). Not the core compartment of human cytosolic B-CK.
Reason: By-similarity mitochondrial localization tied to adipocyte thermogenesis; human B-CK is the cytosolic isoform and a mitochondrial pool is not directly established.
GO:0005886 plasma membrane
EXP
PMID:18566107
HMSN/ACC truncation mutations disrupt brain-type creatine ki...
KEEP AS NON CORE
Summary: Experimental co-localization of CK-B with KCC3 at the plasma membrane, consistent with recruitment of B-CK to membrane ATPase microcompartments. Real but peripheral, not the core cytosolic compartment.
Reason: CKB associates with the membrane via interaction with the KCC3 transporter to supply ATP locally; it is not an integral membrane protein. Retain as a non-core peripheral localization.
Supporting Evidence:
PMID:18566107
immunofluorescence labeling showed that CK-B co-localizes with wild-type KCC3
GO:0004111 creatine kinase activity
IDA
PMID:8186255
Determination of the catalytic site of creatine kinase by si...
ACCEPT
Summary: Direct experimental evidence (site-directed mutagenesis of human B-CK) for creatine kinase activity, including identification of essential catalytic residues. The strongest support for the core molecular function. Accept.
Reason: Direct assay of human CKB enzymatic activity; defines the core molecular function (EC 2.7.3.2).
Supporting Evidence:
PMID:8186255
The results showed residues Cys-283 and Arg-292 are essential for enzyme catalysis.
GO:0046314 phosphocreatine biosynthetic process
IDA
PMID:8186255
Determination of the catalytic site of creatine kinase by si...
ACCEPT
Summary: Direct evidence for the phosphocreatine-forming (forward) direction of the creatine kinase reaction. Core process for CKB. Accept.
Reason: Reflects the physiological left-to-right reaction catalyzed by CKB, directly demonstrated for the human enzyme.
GO:0004111 creatine kinase activity
ISS
GO_REF:0000024
ACCEPT
Summary: ISS support (from ortholog) for the core creatine kinase activity. Consistent with direct evidence. Accept.
Reason: Correct core molecular function; redundant with the experimental annotation but not erroneous.
GO:0005739 mitochondrion
ISS
GO_REF:0000024
MARK AS OVER ANNOTATED
Summary: ISS 'is_active_in mitochondrion' transferred from mouse Q04447. Human B-CK is the cytosolic isoform; an active mitochondrial pool is not directly established.
Reason: By-similarity mitochondrial activity tied to thermogenic-fat biology; not the core localization or site of activity of human cytosolic B-CK.
GO:0070062 extracellular exosome
HDA
PMID:11487543
Intestinal epithelial cells secrete exosome-like vesicles.
KEEP AS NON CORE
Summary: High-throughput proteomic detection of CKB in exosomes. A real observation but reflects passive secretion/vesicle loading rather than a functional compartment.
Reason: Exosome detection is common for abundant cytosolic enzymes; retain as a non-core localization, not a site of creatine kinase function.
GO:0005576 extracellular region
ISS
GO_REF:0000024
MARK AS OVER ANNOTATED
Summary: ISS extracellular-region localization transferred from an ortholog. B-CK is a cytosolic enzyme; extracellular detection (exosomes/secretome) does not establish a functional extracellular localization.
Reason: Over-propagated localization for a cytosolic enzyme; not a site of activity. Exosomal detection is better captured by the exosome annotation.
GO:0031625 ubiquitin protein ligase binding
IPI
PMID:19725078
Proteomic analysis of increased Parkin expression and its in...
KEEP AS NON CORE
Summary: CKB binds an E3 ubiquitin ligase component (Parkin/E3 interactant proteomics), consistent with CKB being a substrate of the ECS(ASB9) Cullin-RING E3 ligase that targets it for degradation. A real binding activity but reflecting CKB's role as a degradation substrate rather than a core enzyme function.
Reason: Informative interaction (E3 ligase/degradation axis) but not part of CKB's core energy-metabolism function; retain as non-core.
GO:0070062 extracellular exosome
HDA
PMID:23533145
In-depth proteomic analyses of exosomes isolated from expres...
KEEP AS NON CORE
Summary: High-throughput proteomic detection of CKB in prostatic-secretion exosomes. Same interpretation as other exosome detections.
Reason: Proteomic exosome detection; non-core localization, not a functional compartment for catalysis.
GO:0021762 substantia nigra development
HEP
PMID:22926577
Quantitative proteomic analysis of human substantia nigra in...
MARK AS OVER ANNOTATED
Summary: HEP annotation derived from a disease-state differential-abundance proteomic survey of human substantia nigra. Differential expression in neurodegenerative disease does not establish a role in substantia nigra development.
Reason: The supporting study compares protein abundance in disease vs control substantia nigra; it does not provide evidence that CKB is involved in the developmental process. Over-interpretation of an expression observation.
GO:0070062 extracellular exosome
HDA
PMID:19056867
Large-scale proteomics and phosphoproteomics of urinary exos...
KEEP AS NON CORE
Summary: High-throughput proteomic detection of CKB in urinary exosomes. Same interpretation as other exosome detections.
Reason: Proteomic exosome detection; non-core localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-200318
ACCEPT
Summary: Traceable author statement (Reactome) placing the creatine kinase reaction in the cytosol. Consistent with the core cytosolic localization. Accept.
Reason: Correct core localization; the creatine kinase reaction catalyzed by CKB occurs in the cytosol.
GO:0004111 creatine kinase activity
TAS
PMID:3034271
Human creatine kinase: isolation and sequence analysis of cD...
ACCEPT
Summary: Traceable author statement (original CKB cDNA cloning paper) for creatine kinase activity. Core molecular function. Accept.
Reason: Correct core molecular function, supported by the foundational cloning/characterization reference.

Core Functions

B-type cytosolic creatine kinase reversibly transfers the high-energy phosphoryl group between ATP and creatine (creatine + ATP = N-phosphocreatine + ADP + H+), acting in the cytosol to interconvert ATP and the phosphocreatine energy reservoir. The forward direction generates phosphocreatine (phosphocreatine biosynthetic process), buffering cellular ATP in brain and non-muscle tissues.

Molecular Function:
creatine kinase activity
Cellular Locations:
Supporting Evidence:
  • PMID:8186255
    The results showed residues Cys-283 and Arg-292 are essential for enzyme catalysis.

References

Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Combined Automated Annotation using Multiple IEA Methods
Intestinal epithelial cells secrete exosome-like vesicles.
Towards a proteome-scale map of the human protein-protein interaction network.
HMSN/ACC truncation mutations disrupt brain-type creatine kinase-dependant activation of K+/Cl- co-transporter 3.
Large-scale proteomics and phosphoproteomics of urinary exosomes.
An empirical framework for binary interactome mapping.
Involvement of creatine kinase B in hepatitis C virus genome replication through interaction with the viral NS4A protein.
Proteomic analysis of increased Parkin expression and its interactants provides evidence for a role in modulation of mitochondrial function.
Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.
Quantitative proteomic analysis of human substantia nigra in Alzheimer's disease, Huntington's disease and Multiple sclerosis.
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
A proteome-scale map of the human interactome network.
Architecture of the human interactome defines protein communities and disease networks.
Human creatine kinase: isolation and sequence analysis of cDNA clones for the B subunit, development of subunit specific probes and determination of gene copy number.
A reference map of the human binary protein interactome.
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
OpenCell: Endogenous tagging for the cartography of human cellular organization.
Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia.
Multimodal cell maps as a foundation for structural and functional genomics.
Determination of the catalytic site of creatine kinase by site-directed mutagenesis.
  • Site-directed mutagenesis of human B-CK shows Cys-283 and Arg-292 are essential for catalysis; mutants abolish homodimer enzymatic activity without preventing dimerization.
    "The results showed residues Cys-283 and Arg-292 are essential for enzyme catalysis."
Structural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3--creatine transition-state analogue complex.
The creatine kinase system and pleiotropic effects of creatine.
Reactome:R-HSA-200318
creatine + ATP => phosphocreatine + ADP [CKB,CKM]

Suggested Questions for Experts

Q: Does human cytosolic B-CK have any direct, functionally relevant mitochondrial or futile-creatine-cycle role, or are the mitochondrion/futile-cycle annotations entirely by-similarity from the mouse thermogenic-fat ortholog?

Q: How general is the role of B-CK as an ATP-supplying partner physically coupled to membrane ATPases/transporters (e.g. KCC2/KCC3) across tissues, and is its kinase activity strictly required for transporter function?

Suggested Experiments

Experiment: Determine the subcellular distribution of endogenous human B-CK (cytosol vs mitochondrion vs membrane microcompartments) across brain, smooth muscle, and adipose tissue using fractionation and quantitative imaging, to test whether any mitochondrial/futile-cycle role exists for the human protein.

Hypothesis: Human B-CK is overwhelmingly cytosolic, with membrane and mitochondrial pools being minor and context-specific.

Experiment: Reconstitute B-CK with KCC2/KCC3 in a controlled system and measure cotransport activity with catalytically active versus catalytically dead B-CK to test whether local ATP regeneration, rather than mere binding, drives transporter activation.

Hypothesis: B-CK kinase activity is required to sustain KCC transporter activity by locally regenerating ATP at the membrane microcompartment.

📚 Additional Documentation

Notes

(CKB-notes.md)

CKB (P12277) — Creatine kinase B-type — review notes

Identity

  • UniProt P12277, KCRB_HUMAN, gene CKB (HGNC:1991), synonym CKBB. 381 aa, EC 2.7.3.2.
  • Brain-type / B-type cytosolic creatine kinase. Forms CK-BB homodimers and CK-MB heterodimers (with CKM, muscle-type).
  • Member of the ATP:guanido phosphotransferase (phosphagen kinase) family.

Catalytic function and reaction direction

  • Reversibly catalyzes transfer of the high-energy phosphoryl between ATP and creatine:
    creatine + ATP = N-phosphocreatine + ADP + H(+) (Rhea:RHEA:17157, EC 2.7.3.2).
  • UniProt FUNCTION: "Reversibly catalyzes the transfer of phosphate between ATP and various phosphogens (e.g. creatine phosphate) (PubMed:8186255). Creatine kinase isoenzymes play a central role in energy transduction in tissues with large, fluctuating energy demands, such as skeletal muscle, heart, brain and spermatozoa."
  • Catalytic residues established by site-directed mutagenesis: Cys-283 and Arg-292 essential for catalysis PMID:8186255; Cys283->Ser/Tyr abolishes activity without affecting dimerization; Asp340->Glu had no effect. This paper grounds GO:0004111 (creatine kinase activity, IDA) and GO:0046314 (phosphocreatine biosynthetic process, IDA).
  • Crystal structure of human B-CK with ADP-Mg2+-NO3--creatine transition-state analogue, 2.0 Å (PMID:18977227; PDB 3B6R, 3DRB, 3DRE), confirms active site and dimer.

Dimer composition / subunit

  • "Dimer of identical or non-identical chains, which can be either B (brain type) or M (muscle type). With MM being the major form in skeletal muscle and myocardium, MB existing in myocardium, and BB existing in many tissues, especially brain." (UniProt SUBUNIT).
  • CK-MB (CKB:CKM heterodimer) — IntAct interaction with CKM (P06732) recorded; clinically the CK-MB heterodimer is a cardiac biomarker.
  • PMID:8186255 also shows heterodimerization and dominant-negative inhibition of the normal subunit by the mutant subunit in BB and MB dimers.

Cytosolic localization coupled to ATPases / phosphocreatine shuttle

  • Cytosolic (cytoplasm, cytosol) is the canonical localization. GOA: GO:0005829 cytosol IDA (HPA), TAS (Reactome).
  • Phosphocreatine/creatine kinase (PCr/CK) shuttle: mitochondrial CK (a separate gene product, uMtCK/CKMT1) regenerates phosphocreatine in mitochondria; PCr diffuses to the cytosol where cytosolic CK (B-CK) coupled to ATPases regenerates ATP locally [Wikipedia/Wallimann review: "PCr generated by mtCK in mitochondria is shuttled to cytosolic CK that is coupled to ATP-dependent processes... CK is associated with the ATPases, forming a coupled microcompartment"].
  • Wallimann review (PMID:21448658): CK/PCr functions as (a) temporal energy buffer, (b) spatial energy buffer/shuttle, (c) metabolic regulator.
  • CKB is the cytosolic ATP-regenerating limb; it is NOT itself a mitochondrial creatine kinase. The GOA mitochondrion annotations (ISS/IEA from Q04447, the mouse "futile creatine cycle" / thermogenic-fat protein) are by-similarity transfers from the futile-creatine-cycle work and should be treated cautiously — human CKB is overwhelmingly cytosolic. Note Q04447 is itself the brain CK ortholog (mouse Ckb), and the UniProt "futile creatine cycle / thermogenic fat mitochondrion" annotations derive from adipocyte thermogenesis studies (Kazak et al.). For HUMAN CKB the mitochondrial/futile-cycle annotations are by-similarity, not directly demonstrated.

Tissue expression

  • BB-CK expressed in brain and in most non-muscle tissues, and in smooth muscle. HPA: "Tissue enhanced (brain, intestine)".
  • Brain: cytosolic B-CK is the dominant cytosolic CK isoform; PCr/CK system supports neuronal/astrocytic energy metabolism.

Known interactions / moonlighting roles (most are GO:0005515 protein binding, IPI)

  • SLC12A6 / KCC3 (K-Cl cotransporter 3): CK-B binds the C-terminal domain of KCC3; the interaction (and CK-B kinase activity) is required for KCC3 cotransport activity PMID:18566107. CK-B is also a partner of the neuronal KCC2 (PMID:16336223, not in GOA). This is the "ATP-regenerating enzyme coupled to a membrane ATP-consuming transporter" microcompartment paradigm. UniProt records plasma-membrane localization (EXP, PMID:18566107) and the SLC12A6 interaction.
  • ASB9 (Q96DX5): substrate-recognition subunit of an ECS(ASB9)/Cullin-RING E3 ligase; CKB is ubiquitinated by ECS(ASB9), leading to proteasomal degradation [UniProt PTM, PMID:33268465]. EM structure of CKB in complex with ASB9-ELOB-ELOC (PMID:32513959, PDB 6V9H). Many IntAct "protein binding" rows (Q96DX5) and the GO:0031625 "ubiquitin protein ligase binding" (IPI, PMID:19725078, with O60260 = Parkin) reflect this E3-ligase/degradation axis. CUL3 (Q13618), CUL5 also recorded.
  • HCV NS4A: CKB interacts with hepatitis C virus NS4A and is recruited to the viral replication complex, upregulating NS3-4A helicase/replicase activity — a host-factor/moonlighting role PMID:19264780. (Q03463 xeno interaction.)
  • TCF4 (P15884), various high-throughput interactome maps (PMID:16189514, 19060904, 25416956, 28514442, 32296183, 33961781, 35271311, 37207277, 40205054) — generic Y2H/AP-MS "protein binding" hits, low individual functional informativeness.

PTMs

  • Phosphorylated (Ser-4, Thr-35, Ser-199, etc.); ubiquitinated (Lys-45, 101, 107, 381) by ECS(ASB9); nitrated (Tyr-269). Mostly large-scale proteomics.

Annotation review judgments (summary)

  • CORE: creatine kinase activity (GO:0004111) — multiple lines (IDA PMID:8186255, IBA, ISS, TAS, IEA). ACCEPT the experimental/IBA; the redundant IEA/ISS/TAS duplicates kept as non-core or accepted.
  • CORE: phosphocreatine biosynthetic process (GO:0046314) — the BP for the reaction (left-to-right physiological direction). ACCEPT.
  • CORE location: cytosol (GO:0005829) — IDA (HPA) ACCEPT.
  • Generic parent MF terms from InterPro IEA (GO:0003824 catalytic activity, GO:0016301 kinase activity, GO:0016772 transferase transferring P, GO:0016775 phosphotransferase N acceptor) — these are correct but uninformative parents of creatine kinase activity → MARK_AS_OVER_ANNOTATED (redundant generic ancestors).
  • protein binding (GO:0005515) IPI rows — uninformative bare "protein binding"; KEEP_AS_NON_CORE (real interactions, but term is uninformative; the informative ones, KCC3 and ASB9/E3 ligase, are captured elsewhere). Avoid as core.
  • ubiquitin protein ligase binding (GO:0031625) IPI — real (ASB9/Parkin E3 axis); KEEP_AS_NON_CORE (CKB is the substrate, not function of CKB per se, but it does bind the ligase).
  • mitochondrion (GO:0005739) ISS/IEA, is_active_in — by-similarity from mouse Q04447 thermogenic-fat work; human CKB is cytosolic. MARK_AS_OVER_ANNOTATED / KEEP_AS_NON_CORE (cannot fully exclude small mito pool, but not the core cytosolic function).
  • futile creatine cycle (GO:0140651) IEA (from Q04447) — by-similarity, adipocyte thermogenesis; KEEP_AS_NON_CORE for human (not demonstrated in human CKB).
  • plasma membrane (GO:0005886) EXP PMID:18566107 — CK-B co-localizes with KCC3 at membrane microcompartment; KEEP_AS_NON_CORE (peripheral/recruited, not a transmembrane protein).
  • extracellular exosome (GO:0070062) HDA, extracellular region (GO:0005576/IBA/ISS), extracellular space — CKB detected in exosomes/secretome (proteomic). KEEP_AS_NON_CORE (real proteomic detection but not the functional compartment); the IBA extracellular_region is questionable for a cytosolic enzyme → MARK_AS_OVER_ANNOTATED for the IBA/ISS extracellular_region (likely over-propagation), KEEP exosome HDA as non-core.
  • substantia nigra development (GO:0021762) HEP PMID:22926577 — differential expression in a substantia nigra proteomic disease study; HEP from an abstract about differential protein expression in neurodegenerative disease does not establish a developmental role. MARK_AS_OVER_ANNOTATED.

📄 View Raw YAML

id: P12277
gene_symbol: CKB
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: >-
  CKB encodes the B-type (brain-type) cytosolic creatine kinase, a 381-residue
  enzyme (EC 2.7.3.2) of the ATP:guanido phosphotransferase (phosphagen kinase)
  family. It reversibly catalyzes transfer of the high-energy phosphoryl group
  between ATP and creatine (creatine + ATP = N-phosphocreatine + ADP + H+),
  interconverting ATP and the phosphocreatine energy reservoir. The active enzyme
  is a dimer: B-CK assembles into CK-BB homodimers and, with the muscle-type
  subunit CKM, into CK-MB heterodimers. As the cytosolic limb of the
  phosphocreatine/creatine-kinase shuttle, B-CK is functionally coupled to
  ATP-consuming processes (e.g. membrane ion transporters and other ATPases),
  locally regenerating ATP from phosphocreatine and providing temporal and spatial
  energy buffering in cells with high, fluctuating energy demands. B-CK is the
  predominant cytosolic creatine kinase of brain and is broadly expressed in smooth
  muscle and most non-muscle tissues. Beyond catalysis it acts as an
  ATP-regenerating partner in membrane microcompartments — for example binding the
  C-terminal domain of the K-Cl cotransporter KCC3 (SLC12A6) and supporting its
  transport activity — and is a substrate of the ECS(ASB9) Cullin-RING E3 ubiquitin
  ligase, which targets it for proteasomal degradation.
references:
- id: GO_REF:0000002
  title: Gene Ontology annotation through association of InterPro records with GO
    terms
  findings: []
- id: GO_REF:0000024
  title: Manual transfer of experimentally-verified manual GO annotation data to orthologs
    by curator judgment of sequence similarity
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
    vocabulary mapping, accompanied by conservative changes to GO terms applied by
    UniProt
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: GO_REF:0000107
  title: Automatic transfer of experimentally verified manual GO annotation data to
    orthologs using Ensembl Compara
  findings: []
- id: GO_REF:0000120
  title: Combined Automated Annotation using Multiple IEA Methods
  findings: []
- id: PMID:11487543
  title: Intestinal epithelial cells secrete exosome-like vesicles.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Proteomic exosome study; supports detection of CKB in secreted
      vesicles but not a functional extracellular role.
- id: PMID:16189514
  title: Towards a proteome-scale map of the human protein-protein interaction network.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput Y2H interactome map; generic 'protein binding'
      support, low functional informativeness for CKB.
- id: PMID:18566107
  title: HMSN/ACC truncation mutations disrupt brain-type creatine kinase-dependant
    activation of K+/Cl- co-transporter 3.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Establishes CK-B (CKB) binding to the KCC3/SLC12A6 C-terminal
      domain, co-localization at the membrane, and a kinase-dependent functional
      role in cotransport.
- id: PMID:19056867
  title: Large-scale proteomics and phosphoproteomics of urinary exosomes.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Exosome proteomic detection of CKB; supports exosome localization
      annotation, not a functional role.
- id: PMID:19060904
  title: An empirical framework for binary interactome mapping.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput binary interactome; generic protein-binding hit.
- id: PMID:19264780
  title: Involvement of creatine kinase B in hepatitis C virus genome replication
    through interaction with the viral NS4A protein.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Shows CKB interacts with HCV NS4A and is recruited to the viral
      replication complex; a moonlighting host-factor role, not a core function.
- id: PMID:19725078
  title: Proteomic analysis of increased Parkin expression and its interactants provides
    evidence for a role in modulation of mitochondrial function.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Parkin (E3 ligase) interactant proteomics; supports CKB as an E3
      ligase-binding substrate, not an independent CKB function.
- id: PMID:21145461
  title: Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative
    proteomics.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: CRL network proteomics; CKB recorded as a CUL3-associated protein
      (consistent with ECS/Cullin-RING substrate role).
- id: PMID:22926577
  title: Quantitative proteomic analysis of human substantia nigra in Alzheimer's
    disease, Huntington's disease and Multiple sclerosis.
  findings: []
  reference_review:
    relevance: LOW
    correctness: MISCITED
    review_notes: A disease-state differential-abundance proteomic survey of substantia
      nigra; it does not demonstrate a role for CKB in substantia nigra development.
- id: PMID:23533145
  title: In-depth proteomic analyses of exosomes isolated from expressed prostatic
    secretions in urine.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Exosome proteomic detection; supports exosome localization, not a
      functional extracellular role.
- id: PMID:25416956
  title: A proteome-scale map of the human interactome network.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput interactome map; generic protein-binding support.
- id: PMID:28514442
  title: Architecture of the human interactome defines protein communities and disease
    networks.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput interactome (BioPlex); generic protein-binding hits
      including CKM and ASB9.
- id: PMID:3034271
  title: 'Human creatine kinase: isolation and sequence analysis of cDNA clones for
    the B subunit, development of subunit specific probes and determination of gene
    copy number.'
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Original cloning/sequence of the human CKB (B-subunit) cDNA;
      cited for creatine kinase activity (TAS).
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput binary interactome (HuRI); generic protein-binding
      hit (ASB9).
- id: PMID:33961781
  title: Dual proteome-scale networks reveal cell-specific remodeling of the human
    interactome.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: High-throughput interactome; generic protein-binding hits (CKM,
      ASB9).
- id: PMID:35271311
  title: 'OpenCell: Endogenous tagging for the cartography of human cellular organization.'
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Endogenous-tagging interactome/localization map; generic protein-binding
      hit.
- id: PMID:37207277
  title: Using brain cell-type-specific protein interactomes to interpret neurodevelopmental
    genetic signals in schizophrenia.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Brain cell-type interactome study; generic protein-binding hits
      (TCF4, CUL3).
- id: PMID:40205054
  title: Multimodal cell maps as a foundation for structural and functional genomics.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Multimodal cell-map interactome; generic protein-binding hit (ASB9).
- id: PMID:8186255
  title: Determination of the catalytic site of creatine kinase by site-directed mutagenesis.
  findings:
  - statement: Site-directed mutagenesis of human B-CK shows Cys-283 and Arg-292
      are essential for catalysis; mutants abolish homodimer enzymatic activity
      without preventing dimerization.
    supporting_text: The results showed residues Cys-283 and Arg-292 are essential
      for enzyme catalysis.
    reference_section_type: ABSTRACT
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Direct functional evidence for human CKB creatine kinase activity
      and its catalytic residues; basis for the GO:0004111 IDA and GO:0046314 IDA.
- id: PMID:18977227
  title: Structural studies of human brain-type creatine kinase complexed with the
    ADP-Mg2+-NO3--creatine transition-state analogue complex.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Crystal structure of human B-CK with transition-state analogue;
      confirms active site, substrate binding, and the dimer.
- id: PMID:21448658
  title: The creatine kinase system and pleiotropic effects of creatine.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Authoritative review of the PCr/CK shuttle and energy-buffering
      roles of cytosolic creatine kinases.
- id: Reactome:R-HSA-200318
  title: creatine + ATP => phosphocreatine + ADP [CKB,CKM]
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Reactome reaction for the creatine kinase activity of CKB/CKM.
existing_annotations:
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: Phylogenetic (IBA) inference that B-CK is active in the extracellular
      region. B-CK is a cytosolic enzyme; it is detected in exosomes/secretome but
      is not active extracellularly. The "is_active_in extracellular region" call
      is an over-propagation and is biologically incorrect as a site of activity.
    action: REMOVE
    reason: Creatine kinase catalysis requires cytosolic ATP/ADP and creatine; the
      enzyme is not known to function in the extracellular region. Detection in
      secreted vesicles does not make the extracellular region a site of activity,
      so an "is_active_in extracellular region" assertion is incorrect. Aligned with
      the parallel CKM review, which REMOVEs the identical IBA annotation; genuine
      extracellular/exosome detection is retained separately under the
      extracellular-exosome annotations.
- term:
    id: GO:0004111
    label: creatine kinase activity
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    summary: Creatine kinase activity is the core molecular function of CKB,
      supported phylogenetically (IBA) and experimentally. Accept.
    action: ACCEPT
    reason: This is the defining, experimentally established activity of CKB
      (EC 2.7.3.2); the IBA inference is consistent with direct assays.
    supported_by:
    - reference_id: PMID:8186255
      supporting_text: The results showed residues Cys-283 and Arg-292 are essential
        for enzyme catalysis.
- term:
    id: GO:0046314
    label: phosphocreatine biosynthetic process
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: The biological process corresponding to the forward (ATP -> phosphocreatine)
      direction of the creatine kinase reaction. Core process for CKB. Accept.
    action: ACCEPT
    reason: Directly reflects the physiological left-to-right reaction direction
      catalyzed by CKB; consistent with the experimentally demonstrated activity.
- term:
    id: GO:0003824
    label: catalytic activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: enables
  review:
    summary: Generic root catalytic-activity term assigned by InterPro2GO. Correct
      but uninformative; subsumed by the specific creatine kinase activity annotation.
    action: MARK_AS_OVER_ANNOTATED
    reason: A high-level ancestor of GO:0004111; adds no information beyond the
      specific molecular function and should not be retained as a meaningful
      annotation.
- term:
    id: GO:0004111
    label: creatine kinase activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  qualifier: enables
  review:
    summary: Electronic (IEA) assignment of the core creatine kinase activity,
      consistent with experimental evidence. Accept (redundant with the experimental
      annotation but correct).
    action: ACCEPT
    reason: Same correct core molecular function; electronic support via RHEA/EC
      mapping aligns with direct evidence.
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  qualifier: located_in
  review:
    summary: Electronic mitochondrion localization transferred by similarity from the
      mouse ortholog (Q04447) in the context of thermogenic-fat / futile-creatine-cycle
      biology. Human CKB is predominantly cytosolic; a mitochondrial pool is not
      directly demonstrated for human B-CK.
    action: MARK_AS_OVER_ANNOTATED
    reason: B-CK is the cytosolic creatine kinase isoform; mitochondrial creatine
      kinase is a distinct gene product (uMtCK/CKMT1). The mitochondrial call is a
      by-similarity transfer specific to adipocyte thermogenesis and is not the core
      localization of human CKB.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Electronic cytosol localization from the UniProt subcellular-location
      mapping. Correct core localization. Accept.
    action: ACCEPT
    reason: B-CK is a cytosolic enzyme; consistent with IDA (HPA) and Reactome TAS
      annotations to cytosol.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Electronic plasma-membrane call from UniProt subcellular-location
      mapping, reflecting peripheral recruitment of B-CK to membrane ATPase
      microcompartments (e.g. with KCC3). Real but peripheral, not the core compartment.
    action: KEEP_AS_NON_CORE
    reason: CKB is not an integral membrane protein; it is recruited to the membrane
      to supply ATP to transporters such as KCC3 (PMID:18566107). Retain as a
      non-core peripheral localization.
- term:
    id: GO:0016301
    label: kinase activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: enables
  review:
    summary: Generic kinase-activity parent from InterPro2GO; subsumed by the
      specific creatine kinase activity. Uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Ancestor of GO:0004111; carries no information beyond the specific
      molecular function.
- term:
    id: GO:0016772
    label: transferase activity, transferring phosphorus-containing groups
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: enables
  review:
    summary: Generic phosphotransferase parent from InterPro2GO; subsumed by the
      specific creatine kinase activity. Uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: High-level ancestor of GO:0004111; redundant generic term.
- term:
    id: GO:0016775
    label: phosphotransferase activity, nitrogenous group as acceptor
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: enables
  review:
    summary: The immediate parent class of creatine kinase activity (phosphotransfer
      to a nitrogenous/guanidino acceptor). Correct but redundant with the specific
      term.
    action: MARK_AS_OVER_ANNOTATED
    reason: Direct ancestor of GO:0004111; the specific creatine kinase activity term
      is preferred and makes this generic term redundant.
- term:
    id: GO:0046314
    label: phosphocreatine biosynthetic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: involved_in
  review:
    summary: Electronic assignment of the core phosphocreatine biosynthetic process,
      consistent with experimental evidence. Accept.
    action: ACCEPT
    reason: Correct core process for CKB; redundant with the IDA/IBA annotations but
      not erroneous.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16189514
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a high-throughput interactome screen.
      Uninformative as a molecular function; the biologically meaningful interactions
      are captured by more specific annotations.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding does not describe a function; retained as non-core
      evidence of interaction only.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19060904
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a high-throughput binary interactome.
      Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19264780
  qualifier: enables
  review:
    summary: Interaction with hepatitis C virus NS4A, recruiting CKB to the viral
      replication complex. A genuine moonlighting interaction but represented only as
      generic 'protein binding'.
    action: KEEP_AS_NON_CORE
    reason: Biologically real host-factor interaction (PMID:19264780) but a
      non-core, condition-specific role; the bare term is uninformative as a core
      function.
    supported_by:
    - reference_id: PMID:19264780
      supporting_text: CKB interacts with HCV NS4A protein and forms a complex with
        NS3-4A, which possesses multiple enzyme activities.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21145461
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a cullin-RING ligase network proteomic
      study (CUL3 association). Uninformative as a function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding; relates to CKB's role as a CRL substrate, retained
      as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25416956
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a high-throughput interactome map.
      Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:28514442
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a BioPlex interactome (includes CKM and
      ASB9 partners). Uninformative as a standalone function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding; the meaningful partners (CKM dimerization, ASB9 E3
      ligase) are better captured specifically. Retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  qualifier: enables
  review:
    summary: Generic 'protein binding' from the HuRI binary interactome (ASB9).
      Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:33961781
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a dual proteome-scale interactome (CKM,
      ASB9). Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:35271311
  qualifier: enables
  review:
    summary: Generic 'protein binding' from the OpenCell endogenous-tagging map.
      Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:37207277
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a brain cell-type interactome (TCF4,
      CUL3). Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:40205054
  qualifier: enables
  review:
    summary: Generic 'protein binding' from a multimodal cell-map interactome (ASB9).
      Uninformative molecular function.
    action: KEEP_AS_NON_CORE
    reason: Bare protein binding is not a core function; retained as non-core.
- term:
    id: GO:0140651
    label: futile creatine cycle
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: Electronic transfer (from mouse Q04447) of involvement in the futile
      creatine cycle (adipocyte thermogenesis). This role is characterized for the
      thermogenic-fat mitochondrial creatine cycle and has not been demonstrated for
      human B-CK; retain as a non-core, by-similarity possibility.
    action: KEEP_AS_NON_CORE
    reason: The futile creatine cycle is a specialized thermogenic-fat process
      inferred by orthology; it is plausible but not the core energy-buffering
      function of cytosolic B-CK in humans.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: Direct immunofluorescence (HPA) localization to the cytosol. This is the
      core, experimentally supported localization of B-CK. Accept.
    action: ACCEPT
    reason: B-CK is a cytosolic enzyme; IDA from HPA directly supports the core
      localization.
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: ISS mitochondrion localization transferred from mouse Q04447
      (thermogenic-fat creatine cycle). Not the core compartment of human cytosolic
      B-CK.
    action: MARK_AS_OVER_ANNOTATED
    reason: By-similarity mitochondrial localization tied to adipocyte thermogenesis;
      human B-CK is the cytosolic isoform and a mitochondrial pool is not directly
      established.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: EXP
  original_reference_id: PMID:18566107
  qualifier: located_in
  review:
    summary: Experimental co-localization of CK-B with KCC3 at the plasma membrane,
      consistent with recruitment of B-CK to membrane ATPase microcompartments.
      Real but peripheral, not the core cytosolic compartment.
    action: KEEP_AS_NON_CORE
    reason: CKB associates with the membrane via interaction with the KCC3
      transporter to supply ATP locally; it is not an integral membrane protein.
      Retain as a non-core peripheral localization.
    supported_by:
    - reference_id: PMID:18566107
      supporting_text: immunofluorescence labeling showed that CK-B co-localizes with
        wild-type KCC3
- term:
    id: GO:0004111
    label: creatine kinase activity
  evidence_type: IDA
  original_reference_id: PMID:8186255
  qualifier: enables
  review:
    summary: Direct experimental evidence (site-directed mutagenesis of human B-CK)
      for creatine kinase activity, including identification of essential catalytic
      residues. The strongest support for the core molecular function. Accept.
    action: ACCEPT
    reason: Direct assay of human CKB enzymatic activity; defines the core molecular
      function (EC 2.7.3.2).
    supported_by:
    - reference_id: PMID:8186255
      supporting_text: The results showed residues Cys-283 and Arg-292 are essential
        for enzyme catalysis.
- term:
    id: GO:0046314
    label: phosphocreatine biosynthetic process
  evidence_type: IDA
  original_reference_id: PMID:8186255
  qualifier: involved_in
  review:
    summary: Direct evidence for the phosphocreatine-forming (forward) direction of
      the creatine kinase reaction. Core process for CKB. Accept.
    action: ACCEPT
    reason: Reflects the physiological left-to-right reaction catalyzed by CKB,
      directly demonstrated for the human enzyme.
- term:
    id: GO:0004111
    label: creatine kinase activity
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: enables
  review:
    summary: ISS support (from ortholog) for the core creatine kinase activity.
      Consistent with direct evidence. Accept.
    action: ACCEPT
    reason: Correct core molecular function; redundant with the experimental
      annotation but not erroneous.
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: is_active_in
  review:
    summary: ISS 'is_active_in mitochondrion' transferred from mouse Q04447. Human
      B-CK is the cytosolic isoform; an active mitochondrial pool is not directly
      established.
    action: MARK_AS_OVER_ANNOTATED
    reason: By-similarity mitochondrial activity tied to thermogenic-fat biology;
      not the core localization or site of activity of human cytosolic B-CK.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:11487543
  qualifier: located_in
  review:
    summary: High-throughput proteomic detection of CKB in exosomes. A real
      observation but reflects passive secretion/vesicle loading rather than a
      functional compartment.
    action: KEEP_AS_NON_CORE
    reason: Exosome detection is common for abundant cytosolic enzymes; retain as a
      non-core localization, not a site of creatine kinase function.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: ISS extracellular-region localization transferred from an ortholog.
      B-CK is a cytosolic enzyme; extracellular detection (exosomes/secretome) does
      not establish a functional extracellular localization.
    action: MARK_AS_OVER_ANNOTATED
    reason: Over-propagated localization for a cytosolic enzyme; not a site of
      activity. Exosomal detection is better captured by the exosome annotation.
- term:
    id: GO:0031625
    label: ubiquitin protein ligase binding
  evidence_type: IPI
  original_reference_id: PMID:19725078
  qualifier: enables
  review:
    summary: CKB binds an E3 ubiquitin ligase component (Parkin/E3 interactant
      proteomics), consistent with CKB being a substrate of the ECS(ASB9)
      Cullin-RING E3 ligase that targets it for degradation. A real binding activity
      but reflecting CKB's role as a degradation substrate rather than a core enzyme
      function.
    action: KEEP_AS_NON_CORE
    reason: Informative interaction (E3 ligase/degradation axis) but not part of
      CKB's core energy-metabolism function; retain as non-core.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:23533145
  qualifier: located_in
  review:
    summary: High-throughput proteomic detection of CKB in prostatic-secretion
      exosomes. Same interpretation as other exosome detections.
    action: KEEP_AS_NON_CORE
    reason: Proteomic exosome detection; non-core localization, not a functional
      compartment for catalysis.
- term:
    id: GO:0021762
    label: substantia nigra development
  evidence_type: HEP
  original_reference_id: PMID:22926577
  qualifier: involved_in
  review:
    summary: HEP annotation derived from a disease-state differential-abundance
      proteomic survey of human substantia nigra. Differential expression in
      neurodegenerative disease does not establish a role in substantia nigra
      development.
    action: MARK_AS_OVER_ANNOTATED
    reason: The supporting study compares protein abundance in disease vs control
      substantia nigra; it does not provide evidence that CKB is involved in the
      developmental process. Over-interpretation of an expression observation.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:19056867
  qualifier: located_in
  review:
    summary: High-throughput proteomic detection of CKB in urinary exosomes. Same
      interpretation as other exosome detections.
    action: KEEP_AS_NON_CORE
    reason: Proteomic exosome detection; non-core localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-200318
  qualifier: located_in
  review:
    summary: Traceable author statement (Reactome) placing the creatine kinase
      reaction in the cytosol. Consistent with the core cytosolic localization.
      Accept.
    action: ACCEPT
    reason: Correct core localization; the creatine kinase reaction catalyzed by CKB
      occurs in the cytosol.
- term:
    id: GO:0004111
    label: creatine kinase activity
  evidence_type: TAS
  original_reference_id: PMID:3034271
  qualifier: enables
  review:
    summary: Traceable author statement (original CKB cDNA cloning paper) for
      creatine kinase activity. Core molecular function. Accept.
    action: ACCEPT
    reason: Correct core molecular function, supported by the foundational
      cloning/characterization reference.
core_functions:
- description: >-
    B-type cytosolic creatine kinase reversibly transfers the high-energy phosphoryl
    group between ATP and creatine (creatine + ATP = N-phosphocreatine + ADP + H+),
    acting in the cytosol to interconvert ATP and the phosphocreatine energy
    reservoir. The forward direction generates phosphocreatine (phosphocreatine
    biosynthetic process), buffering cellular ATP in brain and non-muscle tissues.
  molecular_function:
    id: GO:0004111
    label: creatine kinase activity
  directly_involved_in:
  - id: GO:0046314
    label: phosphocreatine biosynthetic process
  locations:
  - id: GO:0005829
    label: cytosol
  supported_by:
  - reference_id: PMID:8186255
    supporting_text: The results showed residues Cys-283 and Arg-292 are essential
      for enzyme catalysis.
suggested_questions:
- question: Does human cytosolic B-CK have any direct, functionally relevant
    mitochondrial or futile-creatine-cycle role, or are the mitochondrion/futile-cycle
    annotations entirely by-similarity from the mouse thermogenic-fat ortholog?
- question: How general is the role of B-CK as an ATP-supplying partner physically
    coupled to membrane ATPases/transporters (e.g. KCC2/KCC3) across tissues, and is
    its kinase activity strictly required for transporter function?
suggested_experiments:
- description: Determine the subcellular distribution of endogenous human B-CK
    (cytosol vs mitochondrion vs membrane microcompartments) across brain, smooth
    muscle, and adipose tissue using fractionation and quantitative imaging, to test
    whether any mitochondrial/futile-cycle role exists for the human protein.
  hypothesis: Human B-CK is overwhelmingly cytosolic, with membrane and mitochondrial
    pools being minor and context-specific.
- description: Reconstitute B-CK with KCC2/KCC3 in a controlled system and measure
    cotransport activity with catalytically active versus catalytically dead B-CK to
    test whether local ATP regeneration, rather than mere binding, drives transporter
    activation.
  hypothesis: B-CK kinase activity is required to sustain KCC transporter activity by
    locally regenerating ATP at the membrane microcompartment.