ID DJC11_HUMAN Reviewed; 559 AA. AC Q9NVH1; Q4VWF5; Q5VZN0; Q6PK20; Q6PK70; Q8NDM2; Q96CL7; DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot. DT 25-JUL-2006, sequence version 2. DT 28-JAN-2026, entry version 182. DE RecName: Full=DnaJ homolog subfamily C member 11; GN Name=DNAJC11; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). RA Xu J., Xie Y., Mao Y.; RT "Identification of a novel human DNAJ domain-containing protein."; RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), AND VARIANT MET-267. RC TISSUE=Teratocarcinoma; RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., RA Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=16710414; DOI=10.1038/nature04727; RA Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., RA Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., RA Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., RA Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., RA Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., RA Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., RA Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., RA Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., RA Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., RA Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., RA Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., RA Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., RA Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., RA Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., RA Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., RA Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., RA Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., RA Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., RA Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., RA McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., RA Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., RA Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., RA Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., RA Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., RA Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., RA White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., RA Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., RA Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., RA Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.; RT "The DNA sequence and biological annotation of human chromosome 1."; RL Nature 441:315-321(2006). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3), AND VARIANT RP SER-290. RC TISSUE=Brain, Lung, and Placenta; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-559 (ISOFORM 1). RC TISSUE=Mammary cancer; RX PubMed=17974005; DOI=10.1186/1471-2164-8-399; RA Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., RA Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., RA Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., RA Wiemann S., Schupp I.; RT "The full-ORF clone resource of the German cDNA consortium."; RL BMC Genomics 8:399-399(2007). RN [6] RP SUBUNIT. RX PubMed=17624330; DOI=10.1016/j.febslet.2007.06.052; RA Xie J., Marusich M.F., Souda P., Whitelegge J., Capaldi R.A.; RT "The mitochondrial inner membrane protein mitofilin exists as a complex RT with SAM50, metaxins 1 and 2, coiled-coil-helix coiled-coil-helix domain- RT containing protein 3 and 6 and DnaJC11."; RL FEBS Lett. 581:3545-3549(2007). RN [7] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., RA Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [8] RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR RP METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY RP [LARGE SCALE ANALYSIS]. RX PubMed=22814378; DOI=10.1073/pnas.1210303109; RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A., RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E., Timmerman E., RA Prieto J., Arnesen T., Sherman F., Gevaert K., Aldabe R.; RT "N-terminal acetylome analyses and functional insights of the N-terminal RT acetyltransferase NatB."; RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012). RN [9] RP FUNCTION, SUBCELLULAR LOCATION, AND ALTERNATIVE SPLICING. RX PubMed=25111180; DOI=10.1371/journal.pone.0104237; RA Ioakeimidis F., Ott C., Kozjak-Pavlovic V., Violitzi F., Rinotas V., RA Makrinou E., Eliopoulos E., Fasseas C., Kollias G., Douni E.; RT "A splicing mutation in the novel mitochondrial protein DNAJC11 causes RT motor neuron pathology associated with cristae disorganization, and RT lymphoid abnormalities in mice."; RL PLoS ONE 9:E104237-E104237(2014). RN [10] RP INTERACTION WITH THE MICOS COMPLEX, INTERACTION WITH SAM COMPLEX, AND RP SUBCELLULAR LOCATION. RX PubMed=25997101; DOI=10.7554/elife.06265; RA Guarani V., McNeill E.M., Paulo J.A., Huttlin E.L., Froehlich F., RA Gygi S.P., Van Vactor D., Harper J.W.; RT "QIL1 is a novel mitochondrial protein required for MICOS complex stability RT and cristae morphology."; RL Elife 4:0-0(2015). RN [11] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=25944712; DOI=10.1002/pmic.201400617; RA Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D., RA Lane L., Bairoch A., Van Dorsselaer A., Carapito C.; RT "N-terminome analysis of the human mitochondrial proteome."; RL Proteomics 15:2519-2524(2015). CC -!- FUNCTION: [Isoform 1]: Required for mitochondrial inner membrane CC organization. Seems to function through its association with the MICOS CC complex and the mitochondrial outer membrane sorting assembly machinery CC (SAM) complex. {ECO:0000269|PubMed:25111180, ECO:0000305}. CC -!- SUBUNIT: Associates with the mitochondrial contact site and cristae CC organizing system (MICOS) complex, composed of at least MICOS10/MIC10, CC CHCHD3/MIC19, CHCHD6/MIC25, APOOL/MIC27, IMMT/MIC60, APOO/MIC23/MIC26 CC and QIL1/MIC13. This complex was also known under the names MINOS or CC MitOS complex. The MICOS complex associates with mitochondrial outer CC membrane proteins SAMM50, MTX1 and MTX2 (together described as CC components of the mitochondrial outer membrane sorting assembly CC machinery (SAM) complex) and DNAJC11, mitochondrial inner membrane CC protein TMEM11 and with HSPA9 (PubMed:25997101). The MICOS and SAM CC complexes together with DNAJC11 are part of a large protein complex CC spanning both mitochondrial membranes termed the mitochondrial CC intermembrane space bridging (MIB) complex. CC {ECO:0000269|PubMed:17624330, ECO:0000269|PubMed:25997101, CC ECO:0000305}. CC -!- INTERACTION: CC Q9NVH1; Q9NVT9: ARMC1; NbExp=3; IntAct=EBI-1055336, EBI-3506974; CC Q9NVH1; P42858: HTT; NbExp=3; IntAct=EBI-1055336, EBI-466029; CC Q9NVH1; Q9BS40: LXN; NbExp=3; IntAct=EBI-1055336, EBI-1044504; CC Q9NVH1; Q8IYS1: PM20D2; NbExp=3; IntAct=EBI-1055336, EBI-11339910; CC Q9NVH1; Q8N1B4: VPS52; NbExp=3; IntAct=EBI-1055336, EBI-2799833; CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:25997101}. CC Note=Isoforms show differential submitochondrial localization. A 57 kDa CC form (potentially isoform 3) shows either mitochondrial matrix or CC innermembrane (IM) localization, possibly anchored to the IM facing the CC matrix. A 35 kDa form behaved either as an inner membrane space (IMS) CC or an IM protein exposed to the IMS. {ECO:0000269|PubMed:25111180}. CC -!- SUBCELLULAR LOCATION: [Isoform 1]: Mitochondrion outer membrane CC {ECO:0000269|PubMed:25111180}; Peripheral membrane protein CC {ECO:0000269|PubMed:25111180}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=3; CC Comment=Additional isoforms seem to exist. CC {ECO:0000305|PubMed:25111180}; CC Name=1; CC IsoId=Q9NVH1-1; Sequence=Displayed; CC Name=2; CC IsoId=Q9NVH1-2; Sequence=VSP_019933; CC Name=3; CC IsoId=Q9NVH1-3; Sequence=VSP_019932; CC -!- SIMILARITY: Belongs to the DNAJC11 family. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=AAH08772.1; Type=Erroneous initiation; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AY336749; AAR02411.1; -; mRNA. DR EMBL; AK001599; BAA91780.1; -; mRNA. DR EMBL; AL031447; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL159177; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC006086; AAH06086.1; -; mRNA. DR EMBL; BC008772; AAH08772.1; ALT_INIT; mRNA. DR EMBL; BC014145; AAH14145.1; -; mRNA. DR EMBL; AL833841; CAD38701.1; -; mRNA. DR CCDS; CCDS87.1; -. [Q9NVH1-1] DR RefSeq; NP_060668.2; NM_018198.4. [Q9NVH1-1] DR AlphaFoldDB; Q9NVH1; -. DR SMR; Q9NVH1; -. DR BioGRID; 120854; 261. DR CORUM; Q9NVH1; -. DR FunCoup; Q9NVH1; 3551. DR IntAct; Q9NVH1; 148. DR MINT; Q9NVH1; -. DR STRING; 9606.ENSP00000366800; -. DR GlyGen; Q9NVH1; 1 site, 1 O-linked glycan (1 site). DR iPTMnet; Q9NVH1; -. DR PhosphoSitePlus; Q9NVH1; -. DR SwissPalm; Q9NVH1; -. DR BioMuta; DNAJC11; -. DR DMDM; 110808199; -. DR jPOST; Q9NVH1; -. DR MassIVE; Q9NVH1; -. DR PaxDb; 9606-ENSP00000366800; -. DR PeptideAtlas; Q9NVH1; -. DR ProteomicsDB; 82796; -. [Q9NVH1-1] DR ProteomicsDB; 82797; -. [Q9NVH1-2] DR ProteomicsDB; 82798; -. [Q9NVH1-3] DR Pumba; Q9NVH1; -. DR Antibodypedia; 27462; 110 antibodies from 24 providers. DR DNASU; 55735; -. DR Ensembl; ENST00000294401.11; ENSP00000294401.7; ENSG00000007923.18. [Q9NVH1-3] DR Ensembl; ENST00000377577.10; ENSP00000366800.5; ENSG00000007923.18. [Q9NVH1-1] DR GeneID; 55735; -. DR KEGG; hsa:55735; -. DR MANE-Select; ENST00000377577.10; ENSP00000366800.5; NM_018198.4; NP_060668.2. DR UCSC; uc001aof.3; human. [Q9NVH1-1] DR AGR; HGNC:25570; -. DR ClinPGx; PA134893823; -. DR CTD; 55735; -. DR DisGeNET; 55735; -. DR GeneCards; DNAJC11; -. DR HGNC; HGNC:25570; DNAJC11. DR HPA; ENSG00000007923; Low tissue specificity. DR MIM; 614827; gene. DR OpenTargets; ENSG00000007923; -. DR VEuPathDB; HostDB:ENSG00000007923; -. DR eggNOG; KOG0718; Eukaryota. DR GeneTree; ENSGT00860000133842; -. DR HOGENOM; CLU_019611_2_0_1; -. DR InParanoid; Q9NVH1; -. DR OMA; QLDKHTM; -. DR OrthoDB; 18010at2759; -. DR PAN-GO; Q9NVH1; 1 GO annotation based on evolutionary models. DR PhylomeDB; Q9NVH1; -. DR PathwayCommons; Q9NVH1; -. DR Reactome; R-HSA-8949613; Cristae formation. DR SignaLink; Q9NVH1; -. DR SIGNOR; Q9NVH1; -. DR Agora; ENSG00000007923; -. DR BioGRID-ORCS; 55735; 504 hits in 1178 CRISPR screens. DR CD-CODE; 91857CE7; Nucleolus. DR CD-CODE; FB4E32DD; Presynaptic clusters and postsynaptic densities. DR ChiTaRS; DNAJC11; human. DR GeneWiki; DNAJC11; -. DR GenomeRNAi; 55735; -. DR Pharos; Q9NVH1; Tbio. DR PRO; PR:Q9NVH1; -. DR Proteomes; UP000005640; Chromosome 1. DR RNAct; Q9NVH1; protein. DR Bgee; ENSG00000007923; Expressed in metanephros cortex and 198 other cell types or tissues. DR ExpressionAtlas; Q9NVH1; baseline and differential. DR GO; GO:0140275; C:MIB complex; HDA:UniProtKB. DR GO; GO:0005741; C:mitochondrial outer membrane; IMP:UniProtKB. DR GO; GO:0005739; C:mitochondrion; IDA:HPA. DR GO; GO:0016607; C:nuclear speck; IDA:HPA. DR GO; GO:0005654; C:nucleoplasm; IDA:HPA. DR GO; GO:0001401; C:SAM complex; HDA:UniProtKB. DR GO; GO:0042407; P:cristae formation; IMP:UniProtKB. DR GO; GO:0007007; P:inner mitochondrial membrane organization; IC:UniProtKB. DR CDD; cd06257; DnaJ; 1. DR FunFam; 1.10.287.110:FF:000027; DnaJ (Hsp40) homolog, subfamily C, member 11; 1. DR Gene3D; 1.10.287.110; DnaJ domain; 1. DR InterPro; IPR024586; DnaJ-like_C11_C. DR InterPro; IPR001623; DnaJ_domain. DR InterPro; IPR018253; DnaJ_domain_CS. DR InterPro; IPR055225; DNAJC11-like_beta-barrel. DR InterPro; IPR036869; J_dom_sf. DR InterPro; IPR052243; Mito_inner_membrane_organizer. DR PANTHER; PTHR44157; DNAJ HOMOLOG SUBFAMILY C MEMBER 11; 1. DR PANTHER; PTHR44157:SF1; DNAJ HOMOLOG SUBFAMILY C MEMBER 11; 1. DR Pfam; PF00226; DnaJ; 1. DR Pfam; PF11875; DnaJ-like_C11_C; 1. DR Pfam; PF22774; DNAJC11_beta-barrel; 1. DR PRINTS; PR00625; JDOMAIN. DR SMART; SM00271; DnaJ; 1. DR SUPFAM; SSF46565; Chaperone J-domain; 1. DR PROSITE; PS00636; DNAJ_1; 1. DR PROSITE; PS50076; DNAJ_2; 1. PE 1: Evidence at protein level; KW Acetylation; Alternative splicing; Chaperone; Coiled coil; Membrane; KW Mitochondrion; Mitochondrion outer membrane; Phosphoprotein; KW Proteomics identification; Reference proteome. FT INIT_MET 1 FT /note="Removed" FT /evidence="ECO:0007744|PubMed:22814378" FT CHAIN 2..559 FT /note="DnaJ homolog subfamily C member 11" FT /id="PRO_0000247157" FT DOMAIN 14..82 FT /note="J" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00286" FT COILED 417..457 FT /evidence="ECO:0000255" FT MOD_RES 2 FT /note="N-acetylalanine" FT /evidence="ECO:0007744|PubMed:22814378" FT MOD_RES 204 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q5U458" FT VAR_SEQ 367..418 FT /note="Missing (in isoform 3)" FT /evidence="ECO:0000303|PubMed:15489334" FT /id="VSP_019932" FT VAR_SEQ 465..502 FT /note="Missing (in isoform 2)" FT /evidence="ECO:0000303|Ref.1" FT /id="VSP_019933" FT VARIANT 267 FT /note="V -> M (in dbSNP:rs12137794)" FT /evidence="ECO:0000269|PubMed:14702039" FT /id="VAR_027078" FT VARIANT 290 FT /note="T -> A (in dbSNP:rs200454)" FT /id="VAR_027079" FT VARIANT 290 FT /note="T -> S (in dbSNP:rs200454)" FT /evidence="ECO:0000269|PubMed:15489334" FT /id="VAR_055703" FT CONFLICT 309 FT /note="S -> I (in Ref. 1; BAA91780)" FT /evidence="ECO:0000305" SQ SEQUENCE 559 AA; 63278 MW; B16D49B296362800 CRC64; MATALSEEEL DNEDYYSLLN VRREASSEEL KAAYRRLCML YHPDKHRDPE LKSQAERLFN LVHQAYEVLS DPQTRAIYDI YGKRGLEMEG WEVVERRRTP AEIREEFERL QREREERRLQ QRTNPKGTIS VGVDATDLFD RYDEEYEDVS GSSFPQIEIN KMHISQSIEA PLTATDTAIL SGSLSTQNGN GGGSINFALR RVTSAKGWGE LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI RPGLTTVLAR NLDKNTVGYL QWRWGIQSAM NTSIVRDTKT SHFTVALQLG IPHSFALISY QHKFQDDDQT RVKGSLKAGF FGTVVEYGAE RKISRHSVLG AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAMF YATVGPLVVY FAMHRLIIKP YLRAQKEKEL EKQRESAATD VLQKKQEAES AVRLMQESVR RIIEAEESRM GLIIVNAWYG KFVNDKSRKS EKVKVIDVTV PLQCLVKDSK LILTEASKAG LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMV LDSEALRIPK QSHRIDTDG //