DNAJC12 (also called JDP1) is a small cytosolic "J domain-only" co-chaperone of the DnaJ/Hsp40 (DNAJC) family, consisting of an N-terminal J domain (with the conserved HPD motif) and a C-terminal intrinsically disordered region. As a co-chaperone of the HSP70 family, it binds the cognate Hsp70 chaperone Hsc70 (HSPA8) and, through its J domain, stimulates HSP70 ATPase activity. DNAJC12 is a dedicated chaperone for the biopterin (BH4)-dependent aromatic amino acid hydroxylases, interacting with phenylalanine hydroxylase (PAH), tyrosine hydroxylase (TH) and tryptophan hydroxylases (TPH1, TPH2) and assisting their proper folding and stability. It is diffusely cytoplasmic and is up-regulated by ER stress. Biallelic loss-of-function variants cause autosomal-recessive non-BH4-deficient hyperphenylalaninemia accompanied by dopamine and serotonin deficiency, dystonia/parkinsonism and intellectual disability, a condition treatable with BH4 and neurotransmitter precursors.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred cytoplasmic localization, consistent with the experimentally established cytoplasmic localization where DNAJC12 acts as an HSP70 co-chaperone for aromatic amino acid hydroxylases.
Reason: Cytoplasm is the experimentally supported site of action of DNAJC12 (PMID:24122553 IDA).
Supporting Evidence:
file:human/DNAJC12/DNAJC12-uniprot.txt
[Isoform a]: Cytoplasm
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Automated subcellular-location transfer of cytoplasmic localization, consistent with the experimentally established compartment.
Reason: Cytoplasm is the experimentally supported compartment of DNAJC12.
Supporting Evidence:
file:human/DNAJC12/DNAJC12-uniprot.txt
[Isoform a]: Cytoplasm
|
|
GO:0005515
protein binding
|
IPI
PMID:28514442 Architecture of the human interactome defines protein commun... |
KEEP AS NON CORE |
Summary: Interaction (IntAct WITH tryptophan hydroxylase 1, TPH1, P17752). The bare protein binding term records a real client interaction but is uninformative; it reflects DNAJC12's binding to an aromatic amino acid hydroxylase client.
Reason: Bare protein binding is uninformative; this interaction reflects the hydroxylase-client binding that underlies DNAJC12's chaperone function, captured in the core functions.
Supporting Evidence:
file:human/DNAJC12/DNAJC12-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:28514442 UniProtKB:P17752
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
KEEP AS NON CORE |
Summary: BioPlex affinity-purification interactome capturing a DNAJC12-TPH1 (P17752) interaction. The bare protein binding term reflects binding to a hydroxylase client.
Reason: Bare protein binding is uninformative; the TPH1 interaction reflects the hydroxylase-client binding underlying DNAJC12's chaperone function.
Supporting Evidence:
file:human/DNAJC12/DNAJC12-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:33961781 UniProtKB:P17752
|
|
GO:0005515
protein binding
|
IPI
PMID:24122553 The co-chaperone DNAJC12 binds to Hsc70 and is upregulated b... |
MODIFY |
Summary: Immunoaffinity-MS and co-IP showing DNAJC12 interacts with the cognate Hsp70 chaperone Hsc70 (HSPA8, P11142). The bare protein binding term is uninformative; the interaction is specifically with an HSP70-family chaperone.
Reason: Bare protein binding is uninformative. The documented partner is the Hsp70 chaperone Hsc70/HSPA8, so the informative molecular function is Hsp70 protein binding (GO:0030544).
Proposed replacements:
Hsp70 protein binding
Supporting Evidence:
PMID:24122553
The most frequently identified partner of DNAJC12 in unstressed cells was Hsc70, a cognate Hsp70 chaperone
|
|
GO:0005737
cytoplasm
|
IDA
PMID:24122553 The co-chaperone DNAJC12 binds to Hsc70 and is upregulated b... |
ACCEPT |
Summary: Direct immunofluorescence evidence that DNAJC12 is diffusely distributed in the cytoplasm.
Reason: Cytoplasm is the experimentally established compartment where DNAJC12 acts.
Supporting Evidence:
PMID:24122553
a recombinant DNAJC12 protein is diffusely distributed in the cytoplasm
|
Q: Does DNAJC12 recognize a shared structural feature of the aromatic amino acid hydroxylase fold, and how does it coordinate Hsc70 with BH4 cofactor loading during hydroxylase maturation?
Q: Why does DNAJC12 deficiency preferentially manifest as hyperphenylalaninemia with neurotransmitter deficiency, and what determines the variable neurological severity among patients?
Experiment: Reconstitute PAH (and TH/TPH) folding/stability in vitro with DNAJC12, Hsc70 and ATP, comparing wild-type versus HPD-motif and disease (e.g. R72P) mutants to dissect the J-domain-dependent contribution to client maturation.
Experiment: Quantify aromatic amino acid hydroxylase levels and activities, and dopamine/serotonin output, in DNAJC12-knockout neuronal models with and without BH4 supplementation to define the chaperone's role across the hydroxylase family.
CORE MFs:
- The bare protein binding rows: PMID:24122553 WITH HSPA8 (Hsc70) -> MODIFY to Hsp70 protein binding
(GO:0030544). PMID:28514442 / PMID:33961781 WITH TPH1 -> these capture client (hydroxylase) binding; the
TPH1 interaction reflects the hydroxylase-chaperoning function. Could MODIFY to a client-binding MF but
no specific "aromatic amino acid hydroxylase binding" term; keep as KEEP_AS_NON_CORE or note client.
- No explicit ATPase activator activity / Hsp70 binding term in GOA, so propose Hsp70 protein binding as
core MF (supported by Hsc70 interaction + J-domain ATPase stimulation).
CC:
- cytoplasm (IBA/IEA/IDA): ACCEPT, CORE compartment.
*-deep-research*.md file found in this gene directory.new_to_goa, not more_specific_than_existing_goa as the PN label states (no GO:0031072 parent in GOA) โ a minor status-label inaccuracy. The hydroxylase-chaperone biology is the gene's distinctive story but there is no specific "aromatic amino acid hydroxylase binding" GO term; it is appropriately rendered via GO:0051087 (protein-folding chaperone binding) in core_functions. No NEW term warranted.goa_status from more_specific_than_existing_goa to new_to_goa (GOA lacks the GO:0031072 parent).Cytonuclear proteostasis|Chaperone|HSP70 system|J-domain containing HSP70 cochaperone ; PN-node mapping: type=mapped, scope=ok_for_propagation_to_go, GO:0030544 Hsp70 protein binding (group/class/branch = no_mapping)new_to_goa, not more_specific_than_existing_goa as the PN label states (no GO:0031072 parent in GOA) โ a minor status-label inaccuracy. The hydroxylase-chaperone biology is the gene's distinctive story but there is no specific "aromatic amino acid hydroxylase binding" GO term; it is appropriately rendered via GO:0051087 (protein-folding chaperone binding) in core_functions. No NEW term warranted.goa_status from more_specific_than_existing_goa to new_to_goa (GOA lacks the GO:0031072 parent).This file is generated from the current PROTEOSTASIS phase-1 dossier and local gene-review artifacts. Edit the source review, PN mapping, or dossier rather than this generated note when correcting the underlying curation.
id: Q9UKB3
gene_symbol: DNAJC12
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: DNAJC12 (also called JDP1) is a small cytosolic "J domain-only" co-chaperone of the DnaJ/Hsp40 (DNAJC) family, consisting of an N-terminal J domain (with the conserved HPD motif) and a C-terminal intrinsically disordered region. As a co-chaperone of the HSP70 family, it binds the cognate Hsp70 chaperone Hsc70 (HSPA8) and, through its J domain, stimulates HSP70 ATPase activity. DNAJC12 is a dedicated chaperone for the biopterin (BH4)-dependent aromatic amino acid hydroxylases, interacting with phenylalanine hydroxylase (PAH), tyrosine hydroxylase (TH) and tryptophan hydroxylases (TPH1, TPH2) and assisting their proper folding and stability. It is diffusely cytoplasmic and is up-regulated by ER stress. Biallelic loss-of-function variants cause autosomal-recessive non-BH4-deficient hyperphenylalaninemia accompanied by dopamine and serotonin deficiency, dystonia/parkinsonism and intellectual disability, a condition treatable with BH4 and neurotransmitter precursors.
alternative_products:
- name: a (JDP1a)
id: Q9UKB3-1
- name: B (JDP1b)
id: Q9UKB3-2
sequence_note: VSP_001295, VSP_001296
existing_annotations:
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: Phylogenetically inferred cytoplasmic localization, consistent with the experimentally established cytoplasmic localization where DNAJC12 acts as an HSP70 co-chaperone for aromatic amino acid hydroxylases.
action: ACCEPT
reason: Cytoplasm is the experimentally supported site of action of DNAJC12 (PMID:24122553 IDA).
supported_by:
- reference_id: file:human/DNAJC12/DNAJC12-uniprot.txt
supporting_text: '[Isoform a]: Cytoplasm'
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000044
qualifier: located_in
review:
summary: Automated subcellular-location transfer of cytoplasmic localization, consistent with the experimentally established compartment.
action: ACCEPT
reason: Cytoplasm is the experimentally supported compartment of DNAJC12.
supported_by:
- reference_id: file:human/DNAJC12/DNAJC12-uniprot.txt
supporting_text: '[Isoform a]: Cytoplasm'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28514442
qualifier: enables
review:
summary: Interaction (IntAct WITH tryptophan hydroxylase 1, TPH1, P17752). The bare protein binding term records a real client interaction but is uninformative; it reflects DNAJC12's binding to an aromatic amino acid hydroxylase client.
action: KEEP_AS_NON_CORE
reason: Bare protein binding is uninformative; this interaction reflects the hydroxylase-client binding that underlies DNAJC12's chaperone function, captured in the core functions.
supported_by:
- reference_id: file:human/DNAJC12/DNAJC12-goa.tsv
supporting_text: GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:28514442 UniProtKB:P17752
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
qualifier: enables
review:
summary: BioPlex affinity-purification interactome capturing a DNAJC12-TPH1 (P17752) interaction. The bare protein binding term reflects binding to a hydroxylase client.
action: KEEP_AS_NON_CORE
reason: Bare protein binding is uninformative; the TPH1 interaction reflects the hydroxylase-client binding underlying DNAJC12's chaperone function.
supported_by:
- reference_id: file:human/DNAJC12/DNAJC12-goa.tsv
supporting_text: GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:33961781 UniProtKB:P17752
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24122553
qualifier: enables
review:
summary: Immunoaffinity-MS and co-IP showing DNAJC12 interacts with the cognate Hsp70 chaperone Hsc70 (HSPA8, P11142). The bare protein binding term is uninformative; the interaction is specifically with an HSP70-family chaperone.
action: MODIFY
reason: Bare protein binding is uninformative. The documented partner is the Hsp70 chaperone Hsc70/HSPA8, so the informative molecular function is Hsp70 protein binding (GO:0030544).
proposed_replacement_terms:
- id: GO:0030544
label: Hsp70 protein binding
supported_by:
- reference_id: PMID:24122553
supporting_text: The most frequently identified partner of DNAJC12 in unstressed cells was Hsc70, a cognate Hsp70 chaperone
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:24122553
qualifier: located_in
review:
summary: Direct immunofluorescence evidence that DNAJC12 is diffusely distributed in the cytoplasm.
action: ACCEPT
reason: Cytoplasm is the experimentally established compartment where DNAJC12 acts.
supported_by:
- reference_id: PMID:24122553
supporting_text: a recombinant DNAJC12 protein is diffusely distributed in the cytoplasm
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation through association of InterPro records with GO terms
findings: []
- id: PMID:24122553
title: The co-chaperone DNAJC12 binds to Hsc70 and is upregulated by endoplasmic reticulum stress.
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Cached publication title matches PubMed; body confirms DNAJC12 binds Hsc70 (HSPA8) and is a cytoplasmic stress-upregulated co-chaperone. GOA anchors this PMID to GO:0005737 (cytoplasm, IDA) and GO:0005515, supporting DNAJC12's core J-domain co-chaperone function.
findings:
- statement: DNAJC12 binds the cognate Hsp70 chaperone Hsc70 (HSPA8) in unstressed cells and BiP under stress; it is cytoplasmic and up-regulated by ER stress, clarifying its role in regulating Hsp70 function.
reference_section_type: ABSTRACT
- id: PMID:28132689
title: Biallelic Mutations in DNAJC12 Cause Hyperphenylalaninemia, Dystonia, and Intellectual Disability.
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Cached publication title matches PubMed; body confirms DNAJC12 is an HSP70 co-chaperone of the aromatic amino acid hydroxylases (PAH, TH, TPH) whose biallelic loss-of-function causes hyperphenylalaninemia with neurotransmitter deficiency, establishing the gene's in-vivo specific-client chaperone function.
findings:
- statement: DNAJC12 is an HSP70-family co-chaperone that interacts with phenylalanine hydroxylase (PAH), tyrosine hydroxylase and tryptophan hydroxylase; biallelic loss-of-function causes non-BH4-deficient hyperphenylalaninemia with dopamine/serotonin deficiency, dystonia and intellectual disability.
reference_section_type: ABSTRACT
- statement: PAH enzyme activity is reduced in the presence of DNAJC12 mutations; the J domain (HPD motif) stimulates HSP70 ATPase activity.
reference_section_type: RESULTS
- id: PMID:28514442
title: Architecture of the human interactome defines protein communities and disease networks.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
findings: []
- id: file:human/DNAJC12/DNAJC12-uniprot.txt
title: UniProt entry Q9UKB3 (DJC12_HUMAN), DnaJ homolog subfamily C member 12 / JDP1
findings:
- statement: Probable co-chaperone participating in proper folding of biopterin-dependent aromatic amino acid hydroxylases (PAH, TH, TPH1, TPH2); interacts with HSPA8/Hsc70; cytoplasmic; loss-of-function causes non-BH4-deficient hyperphenylalaninemia.
reference_section_type: OTHER
core_functions:
- description: Cytosolic J-domain co-chaperone of the HSP70 family that binds the cognate Hsp70 chaperone Hsc70 (HSPA8) and stimulates HSP70 ATPase activity via its J-domain HPD motif.
molecular_function:
id: GO:0030544
label: Hsp70 protein binding
locations:
- id: GO:0005737
label: cytoplasm
supported_by:
- reference_id: PMID:24122553
supporting_text: The most frequently identified partner of DNAJC12 in unstressed cells was Hsc70, a cognate Hsp70 chaperone
- reference_id: PMID:28132689
supporting_text: DNAJC12 encodes a co-chaperone of the HSP70 family which interacts with PAH, tyrosine hydroxylase, and tryptophan hydroxylase
- description: Dedicated co-chaperone for the biopterin-dependent aromatic amino acid hydroxylases (PAH, TH, TPH1, TPH2), binding these clients and assisting their proper folding and stability; loss of function reduces PAH activity and causes hyperphenylalaninemia.
molecular_function:
id: GO:0051087
label: protein-folding chaperone binding
locations:
- id: GO:0005737
label: cytoplasm
supported_by:
- reference_id: file:human/DNAJC12/DNAJC12-uniprot.txt
supporting_text: Probable co-chaperone that participates in the proper folding of biopterin-dependent aromatic amino acid hydroxylases, which include phenylalanine-4-hydroxylase (PAH), tyrosine 3-monooxygenase (TH) and peripheral and neuronal tryptophan hydroxylases (TPH1 and TPH2).
- reference_id: PMID:28132689
supporting_text: PAH enzyme activity was reduced in the presence of DNAJC12 mutations
proposed_new_terms: []
suggested_questions:
- question: Does DNAJC12 recognize a shared structural feature of the aromatic amino acid hydroxylase fold, and how does it coordinate Hsc70 with BH4 cofactor loading during hydroxylase maturation?
- question: Why does DNAJC12 deficiency preferentially manifest as hyperphenylalaninemia with neurotransmitter deficiency, and what determines the variable neurological severity among patients?
suggested_experiments:
- description: Reconstitute PAH (and TH/TPH) folding/stability in vitro with DNAJC12, Hsc70 and ATP, comparing wild-type versus HPD-motif and disease (e.g. R72P) mutants to dissect the J-domain-dependent contribution to client maturation.
- description: Quantify aromatic amino acid hydroxylase levels and activities, and dopamine/serotonin output, in DNAJC12-knockout neuronal models with and without BH4 supplementation to define the chaperone's role across the hydroxylase family.