id: Q9H3Z4
gene_symbol: DNAJC5
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: DNAJC5 (cysteine string protein alpha, CSPalpha; also CLN4) is a palmitoylated DnaJ/HSP40 co-chaperone of the presynaptic and secretory-vesicle membrane. It carries an N-terminal J domain that recruits and stimulates the constitutive HSP70 chaperone HSC70/HSPA8 and a central cysteine-string domain whose extensive palmitoylation anchors the protein to vesicle membranes. As a vesicle-localized co-chaperone it maintains the conformational integrity of the SNARE machinery, acting as a co-chaperone for SNAP-25 (with HSC70 and SGTA) and interacting with synaptotagmins, thereby supporting regulated/calcium-dependent exocytosis and the synaptic vesicle cycle and protecting nerve terminals against activity-dependent degeneration. Loss-of-function or aggregation-prone mutations in the cysteine-string domain (Leu115Arg, Leu116del) cause autosomal-dominant adult-onset neuronal ceroid lipofuscinosis (CLN4/ANCL, Kufs type).
alternative_products:
- name: '1'
  id: Q9H3Z4-1
- name: '2'
  id: Q9H3Z4-2
  sequence_note: VSP_001292
existing_annotations:
- term:
    id: GO:0006457
    label: protein folding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: Phylogenetic inference that DNAJC5 participates in protein folding, reflecting its J-domain co-chaperone family membership. CSPalpha assists HSC70 rather than acting as an autonomous foldase.
    action: KEEP_AS_NON_CORE
    reason: Protein folding is a downstream outcome of the HSC70/HSP70 machine that CSPalpha supports as a J-domain co-chaperone; the informative molecular function is co-chaperone/HSP70-activator activity, so folding is retained as non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a general chaperone in regulated exocytosis
- term:
    id: GO:0016020
    label: membrane
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: CSPalpha is a palmitoylated, membrane-anchored co-chaperone; membrane is a correct but generic compartment.
    action: KEEP_AS_NON_CORE
    reason: Membrane localization is correct and palmitoylation-dependent, but the more specific and informative compartment is the synaptic/secretory vesicle membrane and presynapse; bare membrane is retained as non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0098793
    label: presynapse
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: CSPalpha acts at the presynaptic terminal on synaptic vesicles, supporting neurotransmitter release. This is a core site of action.
    action: ACCEPT
    reason: Strongly supported by the presynaptic/synaptic-vesicle biology of CSPalpha and its role in calcium-dependent neurotransmitter release at nerve endings.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: May be involved in calcium-dependent
- term:
    id: GO:0098693
    label: regulation of synaptic vesicle cycle
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: CSPalpha regulates the synaptic vesicle cycle by chaperoning the exocytic SNARE machinery and supporting regulated exocytosis.
    action: ACCEPT
    reason: Consistent with the established presynaptic co-chaperone role of CSPalpha in maintaining release-competent synaptic vesicles.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a co-chaperone for the SNARE protein SNAP-25
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: located_in
  review:
    summary: Electronic cytoplasm annotation; CSPalpha has a cytosolic pool but functions mainly on vesicle membranes.
    action: KEEP_AS_NON_CORE
    reason: Generic cytoplasm localization; consistent with the documented cytosol pool but less informative than the vesicle-membrane/presynapse localization.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm, cytosol'
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Cytosol localization from the UniProt subcellular-location mapping.
    action: KEEP_AS_NON_CORE
    reason: Consistent with a cytosolic pool but peripheral to the membrane-anchored functional localization.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm, cytosol'
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Plasma membrane localization, corroborated by direct IDA evidence (PMID:21820099) and by the palmitoylation-dependent membrane anchor.
    action: KEEP_AS_NON_CORE
    reason: CSPalpha is found at the cell membrane in addition to vesicle membranes; a genuine but non-core compartment relative to the synaptic-vesicle site of action.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Cell membrane {ECO:0000269|PubMed:21820099}
- term:
    id: GO:0016020
    label: membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Generic membrane localization from UniProt subcellular-location mapping.
    action: KEEP_AS_NON_CORE
    reason: Correct but generic; the informative compartment is the vesicle membrane/presynapse.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0042470
    label: melanosome
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Melanosome localization derived from large-scale melanosome proteomics (PMID:17081065), captured as an UniProt subcellular-location keyword.
    action: KEEP_AS_NON_CORE
    reason: A genuine proteomic detection in melanosome fractions but a specialized, peripheral context unrelated to CSPalpha's core synaptic co-chaperone function.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Identified by mass
- term:
    id: GO:0042584
    label: chromaffin granule membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Chromaffin granule (secretory vesicle) membrane localization, consistent with the secretory-vesicle role of CSPalpha in regulated exocytosis.
    action: ACCEPT
    reason: CSPalpha is an established component of secretory/chromaffin granule membranes where it chaperones the exocytic machinery; a relevant specific localization.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: secretory vesicle,
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:29997244
  qualifier: enables
  review:
    summary: Quantitative two-hybrid (LuTHy) capture of the CSPalpha-ZDHHC17 interaction. The bare protein binding term is uninformative; the partner is the palmitoyltransferase ZDHHC17, which palmitoylates CSPalpha.
    action: KEEP_AS_NON_CORE
    reason: Records a real, biologically meaningful interaction with the ZDHHC17 palmitoyltransferase but bare protein binding is uninformative and is not elevated to core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Interacts with ZDHHC17 (via ANK repeats)
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:33961781
  qualifier: enables
  review:
    summary: BioPlex affinity-purification interactome also capturing the CSPalpha-ZDHHC17 interaction. Bare protein binding is uninformative.
    action: KEEP_AS_NON_CORE
    reason: Corroborates the ZDHHC17 interaction but the bare protein binding term is uninformative; retained as non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Interacts with ZDHHC17 (via ANK repeats)
- term:
    id: GO:0006457
    label: protein folding
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: Ensembl-projected protein folding annotation from the mouse ortholog, reflecting the J-domain co-chaperone role.
    action: KEEP_AS_NON_CORE
    reason: Same rationale as the IBA protein folding annotation; a downstream process of the HSC70 machine CSPalpha assists, not its core molecular function.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a general chaperone in regulated exocytosis
- term:
    id: GO:0008021
    label: synaptic vesicle
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: located_in
  review:
    summary: Synaptic vesicle localization projected from the mouse ortholog; a core site for CSPalpha.
    action: ACCEPT
    reason: CSPalpha is a canonical synaptic-vesicle protein; this localization is central to its function.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: secretory vesicle,
- term:
    id: GO:0030672
    label: synaptic vesicle membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: is_active_in
  review:
    summary: CSPalpha acts on the synaptic vesicle membrane, where its palmitoylated cysteine-string domain anchors it. This is the core functional localization.
    action: ACCEPT
    reason: The palmitoylation-anchored, vesicle-membrane localization is where CSPalpha chaperones the exocytic machinery; strongly supported.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0031594
    label: neuromuscular junction
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: is_active_in
  review:
    summary: Neuromuscular junction localization projected from the mouse ortholog, a presynaptic site where CSPalpha operates.
    action: KEEP_AS_NON_CORE
    reason: A specific presynaptic site consistent with CSPalpha biology; retained as a non-core localization subsumed by the broader presynapse annotation.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: important role in
- term:
    id: GO:0043008
    label: ATP-dependent protein binding
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: enables
  review:
    summary: ATP-dependent protein binding projected from the rat ortholog, reflecting the ATP-dependent interaction of CSPalpha with HSC70/HSPA8 via its J domain.
    action: MODIFY
    reason: The interaction this captures is the J-domain-mediated, ATP-dependent recruitment of HSC70/HSPA8; the informative molecular function is HSP70/HSC70 co-chaperone (Hsp70 protein binding), which is more specific than the generic ATP-dependent protein binding term.
    proposed_replacement_terms:
    - id: GO:0030544
      label: Hsp70 protein binding
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Interacts with the chaperone complex consisting of HSC70 and
- term:
    id: GO:0098693
    label: regulation of synaptic vesicle cycle
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: Ensembl-projected regulation of synaptic vesicle cycle, consistent with the IBA annotation of the same term.
    action: ACCEPT
    reason: Redundant with the IBA annotation and well supported by CSPalpha presynaptic biology.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a co-chaperone for the SNARE protein SNAP-25
- term:
    id: GO:0098793
    label: presynapse
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: is_active_in
  review:
    summary: Ensembl-projected presynapse localization, redundant with the IBA presynapse annotation.
    action: ACCEPT
    reason: Core site of action; redundant with the IBA presynapse annotation.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: May be involved in calcium-dependent
- term:
    id: GO:0016020
    label: membrane
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: ISS membrane localization from the bovine ortholog (Q29455).
    action: KEEP_AS_NON_CORE
    reason: Generic membrane localization; correct but less informative than vesicle membrane.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0042470
    label: melanosome
  evidence_type: EXP
  original_reference_id: PMID:17081065
  qualifier: located_in
  review:
    summary: Experimental (mass spectrometry) detection of CSPalpha in melanosome fractions.
    action: KEEP_AS_NON_CORE
    reason: A genuine proteomic localization in a specialized lysosome-related organelle, peripheral to the core synaptic co-chaperone function.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Identified by mass
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: ISS cytosol localization from the bovine ortholog.
    action: KEEP_AS_NON_CORE
    reason: Consistent with a cytosolic pool; peripheral to the membrane-anchored functional localization.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm, cytosol'
- term:
    id: GO:0035577
    label: azurophil granule membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6798739
  qualifier: located_in
  review:
    summary: Reactome neutrophil-degranulation pathway annotation placing CSPalpha on the azurophil granule membrane.
    action: KEEP_AS_NON_CORE
    reason: A specialized leukocyte secretory-granule context from pathway curation; peripheral to the core neuronal/secretory co-chaperone role.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: secretory vesicle,
- term:
    id: GO:0035579
    label: specific granule membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6799350
  qualifier: located_in
  review:
    summary: Reactome neutrophil-degranulation annotation placing CSPalpha on the specific granule membrane.
    action: KEEP_AS_NON_CORE
    reason: Specialized leukocyte secretory-granule context; peripheral to the core function.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: secretory vesicle,
- term:
    id: GO:0006887
    label: exocytosis
  evidence_type: NAS
  original_reference_id: PMID:10099709
  qualifier: involved_in
  review:
    summary: CSPalpha participates in exocytosis as a vesicle-membrane co-chaperone supporting the release machinery.
    action: KEEP_AS_NON_CORE
    reason: Exocytosis is a genuine process CSPalpha contributes to, but the more specific regulated/synaptic-vesicle exocytosis terms better capture its role; retained as a non-core (parent) process.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a general chaperone in regulated exocytosis
- term:
    id: GO:0016079
    label: synaptic vesicle exocytosis
  evidence_type: TAS
  original_reference_id: PMID:10099709
  qualifier: involved_in
  review:
    summary: CSPalpha supports synaptic vesicle exocytosis at nerve terminals.
    action: ACCEPT
    reason: Well supported by CSPalpha's presynaptic role in calcium-dependent neurotransmitter release.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: calcium-dependent neurotransmitter release at nerve endings
- term:
    id: GO:0045055
    label: regulated exocytosis
  evidence_type: TAS
  original_reference_id: PMID:15217342
  qualifier: involved_in
  review:
    summary: CSPalpha acts as a general chaperone in regulated exocytosis.
    action: ACCEPT
    reason: Directly stated in UniProt FUNCTION and central to CSPalpha biology in both neuronal and endocrine secretory cells.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Acts as a general chaperone in regulated exocytosis
- term:
    id: GO:0016020
    label: membrane
  evidence_type: HDA
  original_reference_id: PMID:19946888
  qualifier: located_in
  review:
    summary: High-throughput proteomics detection of CSPalpha in a membrane fraction.
    action: KEEP_AS_NON_CORE
    reason: Generic membrane localization from large-scale data; correct but non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6798739
  qualifier: located_in
  review:
    summary: Reactome neutrophil-degranulation annotation placing CSPalpha at the plasma membrane (post-fusion).
    action: KEEP_AS_NON_CORE
    reason: Plasma membrane is a genuine CSPalpha compartment but this annotation derives from a specialized degranulation pathway; non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Cell membrane {ECO:0000269|PubMed:21820099}
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6799350
  qualifier: located_in
  review:
    summary: Reactome neutrophil-degranulation annotation placing CSPalpha at the plasma membrane.
    action: KEEP_AS_NON_CORE
    reason: Same as the other Reactome degranulation plasma-membrane annotation; non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Cell membrane {ECO:0000269|PubMed:21820099}
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-888589
  qualifier: located_in
  review:
    summary: Reactome GABA-vesicle pathway annotation placing CSPalpha at the plasma membrane.
    action: KEEP_AS_NON_CORE
    reason: Genuine plasma-membrane compartment from pathway curation; non-core relative to the vesicle-membrane site of action.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Cell membrane {ECO:0000269|PubMed:21820099}
- term:
    id: GO:0061202
    label: clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-888589
  qualifier: located_in
  review:
    summary: Reactome annotation placing CSPalpha on the clathrin-sculpted GABA transport vesicle membrane, a specific synaptic-vesicle subtype membrane.
    action: ACCEPT
    reason: A specific synaptic-vesicle membrane localization consistent with CSPalpha's vesicle-membrane co-chaperone role.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0061202
    label: clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-917744
  qualifier: located_in
  review:
    summary: Second Reactome annotation for the clathrin-sculpted GABA transport vesicle membrane.
    action: ACCEPT
    reason: Redundant with the other R-HSA-888589 annotation; a relevant synaptic-vesicle membrane localization.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: regulates DNAJC5 membrane attachment
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: HDA
  original_reference_id: PMID:20833797
  qualifier: located_in
  review:
    summary: High-throughput proteomics detection of CSPalpha in a mitochondrial fraction.
    action: MARK_AS_OVER_ANNOTATED
    reason: Mitochondrial localization is not supported by CSPalpha's biology (a palmitoylated vesicle-membrane/cytosolic co-chaperone) and most likely reflects fractionation cross-contamination in large-scale proteomics.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-goa.tsv
      supporting_text: mitochondrion
- term:
    id: GO:0005765
    label: lysosomal membrane
  evidence_type: HDA
  original_reference_id: PMID:17897319
  qualifier: located_in
  review:
    summary: High-throughput proteomics detection of CSPalpha at the lysosomal membrane.
    action: KEEP_AS_NON_CORE
    reason: CSPalpha has documented links to lysosome-related organelles (melanosome) and unconventional secretion, so a lysosomal-membrane pool is plausible but peripheral; retained as non-core.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-goa.tsv
      supporting_text: lysosomal membrane
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: IDA
  original_reference_id: PMID:21820099
  qualifier: located_in
  review:
    summary: Direct immunolocalization of CSPalpha at the cell membrane, from the study that identified the CLN4B disease variants.
    action: KEEP_AS_NON_CORE
    reason: A directly observed plasma-membrane pool; genuine but non-core relative to the vesicle-membrane/presynapse site of action.
    supported_by:
    - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
      supporting_text: Cell membrane {ECO:0000269|PubMed:21820099}
references:
- id: GO_REF:0000024
  title: Manual transfer of experimentally-verified manual GO annotation data to orthologs using Ensembl Compara
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation through association of InterPro records with GO terms
  findings: []
- id: GO_REF:0000107
  title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning models
  findings: []
- id: PMID:10099709
  title: 'Genetics of synaptic vesicle function: toward the complete functional anatomy of an organelle.'
  findings:
  - statement: Review of synaptic-vesicle protein function used as the basis for the exocytosis / synaptic-vesicle-exocytosis annotations of CSPalpha.
    reference_section_type: ABSTRACT
- id: PMID:15217342
  title: The synaptic vesicle cycle.
  findings:
  - statement: Review of the synaptic vesicle cycle (exocytosis followed by endocytosis and recycling) used as the basis for the regulated-exocytosis annotation.
    reference_section_type: ABSTRACT
- id: PMID:17081065
  title: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.
  findings:
  - statement: CSPalpha was identified by mass spectrometry in melanosome fractions from stage I to stage IV.
    reference_section_type: RESULTS
- id: PMID:17897319
  title: Integral and associated lysosomal membrane proteins.
  findings: []
- id: PMID:19946888
  title: Defining the membrane proteome of NK cells.
  findings: []
- id: PMID:20833797
  title: Phosphoproteome analysis of functional mitochondria isolated from resting human muscle reveals extensive phosphorylation of inner membrane protein complexes and enzymes.
  findings: []
- id: PMID:21820099
  title: Mutations in DNAJC5, encoding cysteine-string protein alpha, cause autosomal-dominant adult-onset neuronal ceroid lipofuscinosis.
  reference_review:
    relevance: HIGH
    correctness: UNVERIFIED
    review_notes: "Disease-gene reference establishing that CLN4/ANCL-causing CSPalpha variants in the cysteine-string domain abolish palmitoylated monomeric CSPalpha, underpinning the in vivo importance of DNAJC5's synaptic co-chaperone function; also the IDA source for the plasma-membrane localization. Not cached in publications/, so the identifier/content could not be checked against a cached/PubMed anchor; title is consistent with the GOA IDA plasma-membrane row but left UNVERIFIED."
  findings:
  - statement: CLN4B variants Leu115Arg and Leu116del in the cysteine-string domain cause near absence of palmitoylated monomeric CSPalpha and formation of high molecular mass aggregates; CSPalpha was directly localized to the cell membrane.
    reference_section_type: RESULTS
- id: PMID:29997244
  title: 'LuTHy: a double-readout bioluminescence-based two-hybrid technology for quantitative mapping of protein-protein interactions in mammalian cells.'
  findings: []
- id: PMID:33961781
  title: Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
  findings: []
- id: Reactome:R-HSA-6798739
  title: Neutrophil degranulation (azurophil granule membrane)
  findings: []
- id: Reactome:R-HSA-6799350
  title: Neutrophil degranulation (specific granule membrane)
  findings: []
- id: Reactome:R-HSA-888589
  title: 'GABA synthesis, release, reuptake and degradation'
  findings: []
- id: Reactome:R-HSA-917744
  title: Clathrin-sculpted GABA transport vesicle membrane localization
  findings: []
- id: file:human/DNAJC5/DNAJC5-uniprot.txt
  title: UniProt entry Q9H3Z4 (DNJC5_HUMAN), cysteine string protein alpha
  findings:
  - statement: CSPalpha acts as a general chaperone in regulated exocytosis and a co-chaperone for SNAP-25; interacts with the HSC70/SGTA chaperone complex and with synaptotagmins; palmitoylated in its cysteine-string domain, which anchors it to vesicle membranes; CLN4B disease gene.
    reference_section_type: OTHER
core_functions:
- description: Membrane-anchored HSC70/HSP70 co-chaperone that, via its J domain, recruits and stimulates HSC70/HSPA8 to chaperone the presynaptic SNARE machinery (SNAP-25), maintaining release-competent synaptic vesicles.
  molecular_function:
    id: GO:0030544
    label: Hsp70 protein binding
  locations:
  - id: GO:0030672
    label: synaptic vesicle membrane
  - id: GO:0098793
    label: presynapse
  supported_by:
  - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
    supporting_text: Interacts with the chaperone complex consisting of HSC70 and
  - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
    supporting_text: Acts as a co-chaperone for the SNARE protein SNAP-25
- description: General chaperone of regulated/synaptic-vesicle exocytosis that supports calcium-dependent neurotransmitter release at nerve endings and protects synapses against activity-dependent degeneration.
  molecular_function:
    id: GO:0030544
    label: Hsp70 protein binding
  locations:
  - id: GO:0030672
    label: synaptic vesicle membrane
  supported_by:
  - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
    supporting_text: Acts as a general chaperone in regulated exocytosis
  - reference_id: file:human/DNAJC5/DNAJC5-uniprot.txt
    supporting_text: calcium-dependent neurotransmitter release at nerve endings
  directly_involved_in:
  - id: GO:0016079
    label: synaptic vesicle exocytosis
proposed_new_terms: []
suggested_questions:
- question: How does palmitoylation of the cysteine-string domain coordinate CSPalpha's membrane targeting with its J-domain-dependent recruitment of HSC70 to SNARE clients?
- question: By what mechanism do the CLN4B mutations (Leu115Arg, Leu116del) cause a dominant, aggregation-prone gain of toxicity, and how does this relate to lipofuscin accumulation?
- question: Are the melanosome, lysosomal-membrane and mitochondrial proteomic localizations functionally meaningful pools of CSPalpha or fractionation artifacts?
suggested_experiments:
- description: Reconstituted HSC70 ATPase assays comparing wild-type CSPalpha with a J-domain HPD-motif mutant to quantify its HSP70-stimulating co-chaperone activity, and with CLN4B variants to test for loss of co-chaperone function.
- description: Acyl-biotin-exchange / SwissPalm-guided palmitoylation mapping in neurons combined with live imaging to correlate CSPalpha palmitoylation state with synaptic-vesicle membrane targeting and SNAP-25 chaperoning.
- description: Neuronal CSPalpha knockout/rescue with wild-type versus CLN4B variants to dissect the contribution of loss-of-co-chaperone function versus aggregate gain-of-toxicity to neurodegeneration.
