DRG2

UniProt ID: P55039
Organism: Homo sapiens
Review Status: COMPLETE
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Gene Description

DRG2 (Developmentally-regulated GTP-binding protein 2) is a translational GTPase of the TRAFAC class, OBG-HflX-like superfamily (DRG/OBG GTPase family). It catalyzes hydrolysis of GTP to GDP, using Mg2+ as cofactor, and belongs to the conserved DRG family of ribosome-associated GTPases. DRG2 is stabilized by and functions together with its DFRP (DRG family regulatory protein) cofactor DFRP2/RWDD1, whose binding protects DRG2 from polyubiquitination and proteolytic degradation. DRG2 is a substrate of the JmjC oxygenase JMJD7, which catalyzes (3S)-lysyl hydroxylation at Lys-21; this modification is associated with RNA binding and a role in translation. DRG2 is found in both the cytoplasm and the nucleus and is most highly expressed in skeletal muscle, heart and kidney. Through its GTPase activity and ribosome/translation association it is implicated in regulation of protein synthesis, and at the cellular level it has been linked to cell proliferation and growth control.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0002181 cytoplasmic translation
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: DRG2 is a ribosome-associated translational GTPase, so a broad "cytoplasmic translation" process annotation is plausible by phylogenetic inference. Recent work frames DRG2 (with its paralog DRG1) as a translation factor that associates with stalled/paused ribosomes through its DFRP2 partner, but the detailed mechanism (e.g. stimulation of peptidyl transfer) is largely extrapolated from DRG1, bacterial Obg, and yeast Rbg2 orthologs rather than directly demonstrated for human DRG2. The specific regulatory role of human DRG2 in translation therefore remains imprecisely defined, so this broad term is retained as non-core.
Reason: DRG/OBG-family GTPases associate with translating ribosomes, but the broad cytoplasmic translation term does not capture a specific mechanism; the informative core is the GTPase activity. The falcon deep-research synthesis supports a ribosome/translation association for DRG2 but the stalled-ribosome rescue mechanism is inferred from paralogs and ortholog structures, so the term is kept non-core in line with handling of broad translation terms for ribosome-associated factors.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
may bind to RNA and play a role in translation
file:human/DRG2/DRG2-deep-research-falcon.md
DRG2, in complex with its binding partner DFRP2, associates with ribosomes that have paused or stalled during translation elongation
GO:0003924 GTPase activity
IEA
GO_REF:0000120
ACCEPT
Summary: DRG2 hydrolyzes GTP to GDP; GTPase activity is the core molecular function. Electronic transfer here agrees with direct experimental (IDA) evidence.
Reason: GTPase activity is experimentally demonstrated and is the defining catalytic function of DRG2.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
Catalyzes the conversion of GTP to GDP through hydrolysis of
GO:0005525 GTP binding
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: DRG2 binds GTP as the substrate for its GTPase activity. GTP binding is a structural prerequisite for, and subordinate to, the catalytic GTPase function.
Reason: GTP binding is real but the informative core molecular function is GTPase activity; retained as a supporting non-core annotation.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
hydrolysis of the gamma-phosphate bond in GTP
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: DRG2 has a documented nuclear pool, consistent with the experimental (IDA) nuclear localization.
Reason: Nuclear localization is experimentally supported; DRG2 is both nuclear and cytoplasmic.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
SUBCELLULAR LOCATION: Nucleus
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: DRG2 is cytoplasmic, consistent with its ribosome/translation association and with the experimental (IDA) cytoplasm annotation.
Reason: Cytoplasmic localization is experimentally supported and consistent with its function.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
Cytoplasm
GO:0005515 protein binding
IPI
PMID:16189514
Towards a proteome-scale map of the human protein-protein in...
KEEP AS NON CORE
Summary: Interaction with RWDD1/DFRP2 (Q9H446), the DRG-family regulatory cofactor that stabilizes DRG2. The bare protein binding term is uninformative, though this is DRG2's key functional partner; the falcon deep-research synthesis reiterates that DFRP2 binding is essential for DRG2 protein stability and its loss leads to rapid DRG2 degradation.
Reason: Records the functionally important DRG2-RWDD1/DFRP2 interaction, but the term is uninformative; the regulatory relationship is described in the gene narrative.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:16189514 UniProtKB:Q9H446
file:human/DRG2/DRG2-deep-research-falcon.md
This interaction is essential for DRG2 stability; loss of DFRP2 leads to rapid degradation of DRG2
GO:0005515 protein binding
IPI
PMID:25416956
A proteome-scale map of the human interactome network.
KEEP AS NON CORE
Summary: Y2H interactome interaction with RWDD1/DFRP2 (Q9H446). Bare protein binding is uninformative.
Reason: Records the DRG2-RWDD1 interaction but uninformative term; not core.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:25416956 UniProtKB:Q9H446
GO:0005515 protein binding
IPI
PMID:28514442
Architecture of the human interactome defines protein commun...
KEEP AS NON CORE
Summary: Interactome interaction with RWDD1/DFRP2 (Q9H446). Bare protein binding is uninformative.
Reason: Records the DRG2-RWDD1 interaction but uninformative term; not core.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:28514442 UniProtKB:Q9H446
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
KEEP AS NON CORE
Summary: HuRI binary interactome capturing multiple DRG2 interactions including RWDD1/DFRP2 (Q9H446), JMJD7 (P0C870), EIF4A3 (P38919), NAB2 (Q15742) and TSSK3 (Q96PN8). Bare protein binding is uninformative; RWDD1 and JMJD7 are the biologically meaningful partners.
Reason: Records real interactions (RWDD1, JMJD7) but uninformative term; captured by the regulatory/PTM narrative. Other partners are likely incidental Y2H hits.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:32296183 UniProtKB:P0C870
GO:0005515 protein binding
IPI
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative ...
KEEP AS NON CORE
Summary: Neurodegeneration interactome capturing DRG2 interactions with SPRED1 (Q7Z699) and JPH3 (Q8WXH2). Bare protein binding is uninformative and these are isolated HT hits.
Reason: Isolated high-throughput interactions with partners unrelated to DRG2's GTPase/translation function; uninformative term, not core.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:32814053 UniProtKB:Q7Z699
GO:0005515 protein binding
IPI
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling...
KEEP AS NON CORE
Summary: BioPlex affinity-purification capturing DRG2-RWDD1/DFRP2 (Q9H446). Bare protein binding is uninformative.
Reason: Records the DRG2-RWDD1 interaction but uninformative term; not core.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:33961781 UniProtKB:Q9H446
GO:0005515 protein binding
IPI
PMID:40205054
Multimodal cell maps as a foundation for structural and func...
KEEP AS NON CORE
Summary: Multimodal cell-maps interactome capturing DRG2-RWDD1/DFRP2 (Q9H446). Bare protein binding is uninformative.
Reason: Records the DRG2-RWDD1 interaction but uninformative term; not core.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005515 protein binding molecular_function ECO:0000353 IPI PMID:40205054 UniProtKB:Q9H446
GO:0005829 cytosol
IDA
GO_REF:0000052
ACCEPT
Summary: HPA immunofluorescence cytosolic localization, consistent with DRG2's cytoplasmic site of action.
Reason: Direct evidence for cytosolic localization, consistent with function.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005829 cytosol cellular_component ECO:0000314 IDA
GO:0005829 cytosol
TAS
Reactome:R-HSA-9629578
ACCEPT
Summary: Reactome curated cytosolic localization, consistent with the IDA cytosol annotation.
Reason: Correct cytosolic localization.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005829 cytosol cellular_component ECO:0000304 TAS Reactome:R-HSA-9629578
GO:0003723 RNA binding
IDA
PMID:29915238
The Jumonji-C oxygenase JMJD7 catalyzes (3S)-lysyl hydroxyla...
KEEP AS NON CORE
Summary: DRG2 binds RNA, an activity linked to JMJD7-mediated (3S)-lysyl hydroxylation at Lys-21 and to its translation role. A real but conditional/secondary activity.
Reason: RNA binding is experimentally demonstrated but is a hydroxylation-dependent, secondary activity relative to the core GTPase function.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
When hydroxylated at C-3 of 'Lys-21' by JMJD7, may bind to RNA and play a role in translation
GO:0003924 GTPase activity
IDA
PMID:29915238
The Jumonji-C oxygenase JMJD7 catalyzes (3S)-lysyl hydroxyla...
ACCEPT
Summary: Direct experimental demonstration that DRG2 hydrolyzes GTP. This is the core molecular function.
Reason: IDA evidence for GTP hydrolysis establishes GTPase activity as DRG2's core catalytic function.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
Catalyzes the conversion of GTP to GDP through hydrolysis of
GO:0005515 protein binding
IPI
PMID:29915238
The Jumonji-C oxygenase JMJD7 catalyzes (3S)-lysyl hydroxyla...
KEEP AS NON CORE
Summary: Direct interaction with JMJD7 (P0C870), the JmjC oxygenase that hydroxylates DRG2 at Lys-21. Bare protein binding is uninformative, but this is a biologically meaningful enzyme-substrate interaction.
Reason: Records the functionally relevant DRG2-JMJD7 (hydroxylase) interaction, but the term is uninformative; the PTM relationship is captured in the gene narrative.
Supporting Evidence:
file:human/DRG2/DRG2-uniprot.txt
Interacts with JMJD7; this interaction is direct
GO:0005634 nucleus
IDA
PMID:29915238
The Jumonji-C oxygenase JMJD7 catalyzes (3S)-lysyl hydroxyla...
ACCEPT
Summary: Direct evidence for nuclear localization of DRG2.
Reason: Experimentally supported nuclear pool.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005634 nucleus cellular_component ECO:0000314 IDA PMID:29915238
GO:0005737 cytoplasm
IDA
PMID:29915238
The Jumonji-C oxygenase JMJD7 catalyzes (3S)-lysyl hydroxyla...
ACCEPT
Summary: Direct evidence for cytoplasmic localization of DRG2.
Reason: Experimentally supported cytoplasmic localization, consistent with function.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005737 cytoplasm cellular_component ECO:0000314 IDA PMID:29915238
GO:0016020 membrane
HDA
PMID:19946888
Defining the membrane proteome of NK cells.
MARK AS OVER ANNOTATED
Summary: DRG2 appeared in a high-throughput NK-cell membrane-proteome dataset. Generic, non-specific localization for a cytosolic/nuclear GTPase.
Reason: Generic "membrane" from a high-throughput proteomics survey; uninformative and inconsistent with DRG2's documented cytoplasmic/nuclear localization.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0016020 membrane cellular_component ECO:0007005 HDA PMID:19946888
GO:0005525 GTP binding
TAS
PMID:7929244
A novel GTP-binding protein which is selectively repressed i...
KEEP AS NON CORE
Summary: Original (1994) identification of DRG2 as a GTP-binding protein. GTP binding is real but subordinate to the GTPase catalytic function.
Reason: GTP binding is supported but the informative core MF is GTPase activity; retained as a supporting non-core annotation.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0005525 GTP binding molecular_function ECO:0000304 TAS PMID:7929244
GO:0007165 signal transduction
TAS
PMID:7929244
A novel GTP-binding protein which is selectively repressed i...
MARK AS OVER ANNOTATED
Summary: A vague legacy "signal transduction" inference from the 1994 paper that identified DRG2 as a GTP-binding protein repressed in SV40-transformed fibroblasts. No specific signaling pathway is established; DRG2 is a translational GTPase, not a classical signaling GTPase.
Reason: Over-broad, unsupported by a defined pathway; DRG2's function is as a translational GTPase rather than a signal-transducing GTPase.
Supporting Evidence:
file:human/DRG2/DRG2-goa.tsv
GO:0007165 signal transduction biological_process ECO:0000304 TAS PMID:7929244

Core Functions

Translational GTPase of the DRG/OBG family that catalyzes hydrolysis of GTP to GDP (Mg2+-dependent); functions in association with its DFRP2/RWDD1 cofactor and is implicated in regulation of translation.

Molecular Function:
GTPase activity
Cellular Locations:
Supporting Evidence:
  • file:human/DRG2/DRG2-uniprot.txt
    Catalyzes the conversion of GTP to GDP through hydrolysis of
  • file:human/DRG2/DRG2-uniprot.txt
    Belongs to the TRAFAC class OBG-HflX-like GTPase

References

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Suggested Questions for Experts

Q: Does human DRG2 physically associate with translating ribosomes (as known for DRG-family GTPases) and at what step does its GTPase cycle act on translation?

Q: How does DFRP2/RWDD1 binding regulate DRG2's GTPase activity, stability, and ribosome association?

Q: What is the functional role of JMJD7-mediated Lys-21 hydroxylation in switching DRG2 between GTPase and RNA-binding/translation activities?

Suggested Experiments

Experiment: Ribosome co-sedimentation / polysome profiling with tagged DRG2 (with and without RWDD1) to test ribosome association and translational state dependence.

Experiment: In vitro GTP-hydrolysis assays of DRG2 alone and in complex with DFRP2/RWDD1 to define cofactor effects on GTPase kinetics.

Experiment: Compare RNA binding and translation phenotypes of wild-type DRG2 versus a Lys-21 hydroxylation-deficient mutant and in JMJD7-knockout cells.

Deep Research

Falcon

(DRG2-deep-research-falcon.md)

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πŸ“š Additional Documentation

Notes

(DRG2-notes.md)

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Pn Notes

(DRG2-pn-notes.md)

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