ELOC encodes Elongin C, the SKP1-like adaptor subunit of the Elongin BC module. Together with ELOB, ELOC bridges BC-box, VHL-box, and SOCS-box substrate receptors to Cul2 or Cul5 Cullin-RING ubiquitin ligase scaffolds, while also participating in Elongin transcription elongation complexes.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0006511
ubiquitin-dependent protein catabolic process
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Accepted as a pathway-level consequence. ELOC-containing CRL2/CRL5 complexes target substrates for ubiquitination and downstream proteasomal degradation.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
A central and well-established role of ELOC is within the **VHL–ELOB/ELOC–CUL2–RBX1** E3 ubiquitin ligase
|
|
GO:0070449
elongin complex
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.
|
|
GO:0030674
protein-macromolecule adaptor activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Correct and informative. ELOC acts as a protein-macromolecule adaptor within Elongin BC, bridging BC-box/VHL-box/SOCS-box substrate receptors to Cul2/Cul5 CRL scaffolds.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
|
GO:0000151
ubiquitin ligase complex
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: Correct but broad. ELOC is better captured as an adaptor subunit in specific Cul2/Cul5 ubiquitin ligase complexes rather than by the generic ubiquitin ligase complex term alone.
Reason: More specific Cul2-RING, Cul5-RING, and Elongin complex annotations capture the supported complex membership.
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Supported. ELOC has nuclear functions in Elongin/CRL assemblies and has experimentally observed nuclear/nucleolar localization.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: Correct but less precise than the available cytosol and nuclear/nucleoplasm localization annotations.
Reason: Use cytosol and nucleus/nucleoplasm annotations where available rather than generic cytoplasm.
|
|
GO:0006511
ubiquitin-dependent protein catabolic process
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: Accepted as a pathway-level consequence. ELOC-containing CRL2/CRL5 complexes target substrates for ubiquitination and downstream proteasomal degradation.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
A central and well-established role of ELOC is within the **VHL–ELOB/ELOC–CUL2–RBX1** E3 ubiquitin ligase
|
|
GO:0005515
protein binding
|
IPI
PMID:10205047 Structure of the VHL-ElonginC-ElonginB complex: implications... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:12004076 Structure of an HIF-1alpha -pVHL complex: hydroxyproline rec... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:12050673 Structural basis for the recognition of hydroxyproline in HI... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:12149480 Mammalian mediator subunit mMED8 is an Elongin BC-interactin... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:15601820 VHL-box and SOCS-box domains determine binding specificity f... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:16189514 Towards a proteome-scale map of the human protein-protein in... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:16643902 The E3 ubiquitin ligase HOIL-1 induces the polyubiquitinatio... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:17183367 COMMD1 promotes the ubiquitination of NF-kappaB subunits thr... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:19159283 Array MAPPIT: high-throughput interactome analysis in mammal... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:19322197 Termination of NF-kappaB activity through a gammaherpesvirus... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:19327355 Requirement for microtubule integrity in the SOCS1-mediated ... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:20211142 An atlas of combinatorial transcriptional regulation in mous... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:21145461 Dynamics of cullin-RING ubiquitin ligase network revealed by... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:21516116 Next-generation sequencing to generate interactome datasets. |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:21822215 The tumour antigen PRAME is a subunit of a Cul2 ubiquitin li... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:21988832 Toward an understanding of the protein interaction network o... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:22190034 Global landscape of HIV-human protein complexes. |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:23460923 PRAME is a golgi-targeted protein that associates with the E... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:23563313 CCDC22 deficiency in humans blunts activation of proinflamma... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:25416956 A proteome-scale map of the human interactome network. |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:28514442 Architecture of the human interactome defines protein commun... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:31515488 Extensive disruption of protein interactions by genetic vari... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32353859 A SARS-CoV-2 protein interaction map reveals targets for dru... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:33060197 Comparative host-coronavirus protein interaction networks re... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:33827988 ORF10-Cullin-2-ZYG11B complex is not required for SARS-CoV-2... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:36217030 A comprehensive SARS-CoV-2-human protein-protein interactome... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:40205054 Multimodal cell maps as a foundation for structural and func... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0016567
protein ubiquitination
|
IEA
GO_REF:0000041 |
ACCEPT |
Summary: Accepted. ELOC is not the catalytic ubiquitin-transfer subunit, but it is required as an Elongin BC adaptor component of CRL2/CRL5 ligases that mediate substrate ubiquitination.
Reason: Keep the process annotation because ELOC is a direct required module in CRL ubiquitination complexes. Do not add GO:1990756 for ELOC itself, because substrate recognition is supplied by SOCS-box, VHL-box, or related substrate receptor proteins rather than by ELOC.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
ELOC’s primary biochemical function in these contexts is **protein–protein interaction and complex assembly**, not ubiquitin transfer catalysis per se.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0070449
elongin complex
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:40963025 Covariation MS uncovers a protein that controls cysteine cat... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
NAS
PMID:28591624 Crystal Structure of the Cul2-Rbx1-EloBC-VHL Ubiquitin Ligas... |
KEEP AS NON CORE |
Summary: Kept as non-core. Negative transcriptional regulation can arise in specific Elongin-associated contexts, but it is not the central ELOC molecular function.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
NAS
PMID:31273098 A glycine-specific N-degron pathway mediates the quality con... |
KEEP AS NON CORE |
Summary: Supported as a non-core consequence of ELOC-containing CRL activity. ELOC is an adaptor/regulatory subunit rather than the proteasome or catalytic ubiquitin-transfer component.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
A central and well-established role of ELOC is within the **VHL–ELOB/ELOC–CUL2–RBX1** E3 ubiquitin ligase
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:15601820 VHL-box and SOCS-box domains determine binding specificity f... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:21822215 The tumour antigen PRAME is a subunit of a Cul2 ubiquitin li... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:22649776 The Role of Elongin BC-Containing Ubiquitin Ligases. |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:29779948 The Eukaryotic Proteome Is Shaped by E3 Ubiquitin Ligases Ta... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:33398168 Molecular basis for arginine C-terminal degron recognition b... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
NAS
PMID:34743205 CRL2-KLHDC3 E3 ubiquitin ligase complex suppresses ferroptos... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:1990116
ribosome-associated ubiquitin-dependent protein catabolic process
|
NAS
PMID:33909987 Convergence of mammalian RQC and C-end rule proteolytic path... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL pathway context. ELOC contributes through Elongin BC adaptor function in substrate-specific ligase assemblies.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
|
GO:2000104
negative regulation of DNA-templated DNA replication
|
NAS
PMID:22649776 The Role of Elongin BC-Containing Ubiquitin Ligases. |
KEEP AS NON CORE |
Summary: Kept as non-core. Negative regulation of DNA-templated DNA replication is likely a downstream substrate-specific consequence of ELOC-containing ligase activity rather than ELOC's primary molecular role.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
ELOC’s primary biochemical function in these contexts is **protein–protein interaction and complex assembly**, not ubiquitin transfer catalysis per se.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:39039081 Molecular insights into degron recognition by CRL5(ASB7) ubi... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:40440427 ASB7 is a negative regulator of H3K9me3 homeostasis. |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031462
Cul2-RING ubiquitin ligase complex
|
IDA
PMID:37844242 Molecular basis for C-degron recognition by CRL2(APPBP2) ubi... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul2-RING ligase assemblies such as CRL2-VHL.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
|
IDA
PMID:37844242 Molecular basis for C-degron recognition by CRL2(APPBP2) ubi... |
KEEP AS NON CORE |
Summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:35512830 Rab40c regulates focal adhesions and PP6 activity by control... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:37816714 Structure-based design of a phosphotyrosine-masked covalent ... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:34857742 Discovery of an exosite on the SOCS2-SH2 domain that enhance... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:21980433 The SOCS2 ubiquitin ligase complex regulates growth hormone ... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:25505247 Biophysical studies on interactions and assembly of full-siz... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:38418882 The CRL5-SPSB3 ubiquitin ligase targets nuclear cGAS for deg... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:31387940 BIK ubiquitination by the E3 ligase Cul5-ASB11 determines ce... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:32513959 Structure and dynamics of the ASB9 CUL-RING E3 Ligase. |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:23837592 Multimeric complexes among ankyrin-repeat and SOCS-box prote... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:33268465 The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 Ligas... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0140958
target-directed miRNA degradation
|
IMP
PMID:33184237 The ZSWIM8 ubiquitin ligase mediates target-directed microRN... |
KEEP AS NON CORE |
Summary: Kept as non-core. Target-directed miRNA degradation is a specialized pathway context for an ELOC-containing CRL assembly rather than the general function of ELOC itself.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
|
GO:0005515
protein binding
|
IPI
PMID:22510880 Nuclear receptor binding protein 1 regulates intestinal prog... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0001222
transcription corepressor binding
|
IPI
PMID:7660122 Inhibition of transcription elongation by the VHL tumor supp... |
KEEP AS NON CORE |
Summary: Kept as non-core. ELOC can participate in transcriptional regulatory complexes, but its primary role is the Elongin BC adaptor/regulatory module.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
|
GO:0006367
transcription initiation at RNA polymerase II promoter
|
IDA
PMID:7660122 Inhibition of transcription elongation by the VHL tumor supp... |
REMOVE |
Summary: Remove. The cited PMID:7660122 paper concerns VHL inhibition of Elongin-dependent RNA polymerase II transcription elongation, not transcription initiation.
Reason: Evidence-term mismatch: PMID:7660122 supports transcription elongation biology, not GO:0006367 transcription initiation at RNA polymerase II promoter.
|
|
GO:0070449
elongin complex
|
IDA
PMID:7660122 Inhibition of transcription elongation by the VHL tumor supp... |
ACCEPT |
Summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.
|
|
GO:0016567
protein ubiquitination
|
IDA
PMID:30166453 CRL4(AMBRA1) targets Elongin C for ubiquitination and degrad... |
ACCEPT |
Summary: Accepted. ELOC is not the catalytic ubiquitin-transfer subunit, but it is required as an Elongin BC adaptor component of CRL2/CRL5 ligases that mediate substrate ubiquitination.
Reason: Keep the process annotation because ELOC is a direct required module in CRL ubiquitination complexes. Do not add GO:1990756 for ELOC itself, because substrate recognition is supplied by SOCS-box, VHL-box, or related substrate receptor proteins rather than by ELOC.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
ELOC’s primary biochemical function in these contexts is **protein–protein interaction and complex assembly**, not ubiquitin transfer catalysis per se.
|
|
GO:0031466
Cul5-RING ubiquitin ligase complex
|
IDA
PMID:30166453 CRL4(AMBRA1) targets Elongin C for ubiquitination and degrad... |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.
|
|
GO:0005515
protein binding
|
IPI
PMID:21119685 Notch-induced Asb2 expression promotes protein ubiquitinatio... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0031462
Cul2-RING ubiquitin ligase complex
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul2-RING ligase assemblies such as CRL2-VHL.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.
|
|
GO:0005515
protein binding
|
IPI
PMID:21199876 Regulation of inducible nitric-oxide synthase by the SPRY do... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234159 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234163 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234173 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234175 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234177 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234183 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-180540 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-180555 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-180603 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8952039 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8952044 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8952625 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8952626 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8955241 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8955289 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956040 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956099 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956103 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956106 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9705738 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9755303 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9833107 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9833155 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9954721 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9954723 |
ACCEPT |
Summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112379 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112385 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112392 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112395 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112396 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112435 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-112436 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-113411 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-113412 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-113413 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-113414 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-113429 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-1234169 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-1234172 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-1234175 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-6797606 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-6797616 |
ACCEPT |
Summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
|
|
GO:0005515
protein binding
|
IPI
PMID:15590694 Suppressors of cytokine signaling 4 and 5 regulate epidermal... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0005515
protein binding
|
IPI
PMID:10851083 Tracheal development and the von Hippel-Lindau tumor suppres... |
REMOVE |
Summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
Reason: Replace generic binding with specific adaptor and CRL complex annotations.
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
TAS
PMID:7660129 Elongin (SIII): a multisubunit regulator of elongation by RN... |
KEEP AS NON CORE |
Summary: Kept as non-core. Regulation of RNA polymerase II transcription is a supported broader context, but ELOC is best captured by Elongin BC adaptor and CRL complex roles.
Supporting Evidence:
file:human/ELOC/ELOC-deep-research-falcon.md
The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
|
Q: Which ELOC-containing CRL assemblies are most sensitive to ELOC interface variants such as Y79C, and how do these differ from VHL loss?
Q: How separable are ELOC roles in classical Elongin transcription elongation from its dominant CRL2/CRL5 adaptor functions across human cell types?
Experiment: Rescue ELOC-depleted cells with interface mutants and compare VHL-HIF turnover, SOCS-box CRL5 substrate degradation, and RNA polymerase II elongation readouts.
Hypothesis: ELOC interface residues differentially support CRL2-VHL, CRL5-SOCS, and Elongin transcription elongation assemblies.
Experiment: Reconstitute ELOBC-containing CRL2 and CRL5 complexes with wild-type and mutant ELOC and measure complex formation, substrate receptor recruitment, and ubiquitination kinetics.
Hypothesis: ELOC promotes ubiquitin-dependent substrate degradation through adaptor-mediated complex assembly rather than catalytic ubiquitin transfer.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The literature retrieved here consistently uses ELOC as the human gene encoding Elongin C (also called TCEB1) and describes it as the Elongin B/C adaptor subunit that binds BC-box/VHL-box/SOCS-box motifs and bridges substrate receptors to CUL2 or CUL5 in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 54-57, fischer2023decipheringthemolecular pages 65-67)
ELOC (Elongin C) forms a heterodimer with ELOB (Elongin B), commonly referred to as the Elongin BC module. This module is reused as an adaptor in multiple pathways and complexes, notably:
- transcription-related Elongin (ABC) complexes, and
- CRL2 and CRL5 ubiquitin ligases, where Elongin BC bridges substrate receptors to a cullin scaffold. (fischer2023decipheringthemolecular pages 54-57, fischer2023decipheringthemolecular pages 57-59)
At the interaction-motif level, many substrate receptors carry a BC-box (often within a larger VHL-box or SOCS-box), which binds Elongin BC; for VHL-box proteins, an additional CUL2-box mediates selective binding to CUL2, while for SOCS-box proteins a CUL5-box mediates binding to CUL5. (fischer2023decipheringthemolecular pages 54-57, fischer2023decipheringthemolecular pages 57-59)
Cullin-RING ligases are modular E3 ubiquitin ligases. For the ELOC-relevant CRLs:
- CRL2 uses CUL2 as scaffold and RBX1 as the RING component, and uniquely uses ELOB/ELOC as adaptor proteins for substrate receptors like VHL. (fischer2023decipheringthemolecular pages 54-57)
- CRL5 uses CUL5 and RBX2/SAG, and commonly uses SOCS-box substrate receptors that recruit ELOB/ELOC as adaptors. (fischer2023decipheringthemolecular pages 57-59)
ELOC’s primary biochemical function in these contexts is protein–protein interaction and complex assembly, not ubiquitin transfer catalysis per se. Its functional impact is therefore mainly through:
- enabling assembly of active E3 complexes,
- selecting cullin scaffold (CUL2 vs CUL5) via receptor motifs, and
- controlling kinetics/geometry of ubiquitination indirectly through complex stability and dynamics. (lin2024diversityofstructure pages 3-5, wang2024cand1inhibitscullin2ring pages 6-8)
A central and well-established role of ELOC is within the VHL–ELOB/ELOC–CUL2–RBX1 E3 ubiquitin ligase (often termed CRL2^VHL), which targets HIF-α subunits for ubiquitination after proline hydroxylation by PHD enzymes. (fischer2023decipheringthemolecular pages 54-57, andreou2022elonginc(eloctceb1)associated pages 4-7)
Structural/mechanistic evidence for the ELOC–pVHL interface. A recurrent disease hotspot variant ELOC p.Tyr79Cys lies in a conserved region important for pVHL interaction; Tyr79 mediates a key contact (hydrogen bond) with pVHL (shown structurally). (andreou2022elonginc(eloctceb1)associated pages 2-4, andreou2022elonginc(eloctceb1)associated media cca6df01)
Functional consequence in tumors. In ELOC-mutated RCC described as “VHL-competent,” the Tyr79Cys variant shows reduced co-precipitation with other complex components and correlates with accumulation of HIF-1α and HIF-2α, consistent with impaired CRL2^VHL-mediated degradation. (andreou2022elonginc(eloctceb1)associated pages 4-7)
Network-level impact. HIF activation drives broad transcriptional programs; one synthesis in the retrieved literature states HIF directly regulates >800 target genes, illustrating the magnitude of downstream consequences when the ELOC/VHL axis is disrupted. (fischer2023decipheringthemolecular pages 54-57)
ELOC also functions as the adaptor (via ELOB/ELOC) that allows SOCS-box proteins to assemble CRL5 complexes with CUL5 and RBX2. In this framework, SOCS-box proteins use a BC-box to bind ELOB/ELOC and a CUL5-box (LPΦP-like motif) to bind CUL5. (fischer2023decipheringthemolecular pages 57-59)
In the disease-genetics study on ELOC-associated VHL-like disease, ELOC is explicitly linked to SOCS-mediated complexes and their substrates, including signaling proteins such as JAK2, reinforcing the connection to cytokine/JAK/STAT pathway control via CRL5 assemblies. (andreou2022elonginc(eloctceb1)associated pages 4-7)
ELOC is not only a shared component of CRL5-type ligases; it can itself be polyubiquitinated and degraded. A proteomics-driven EMBO Journal study reported that CRL4^AMBRA1 targets ELOC for ubiquitination and degradation, disrupting CRL5 assembly and attenuating CRL5 activity; this cross-regulation was tied to IL-6/STAT3 signaling and HIV-1 infectivity (via CRL5^Vif). (chen2018crl4ambra1targetselongin pages 1-2)
In human HuH-7 cells, endogenous Elongin C shows nuclear/nucleolar-like speckles with 1:1 overlap with nucleolin. During infection with La Crosse virus (LACV), the viral protein NSs triggers a marked redistribution of Elongin C away from these nucleolar speckles without decreasing ELOC protein abundance on immunoblots, consistent with relocalization rather than degradation. (schoen2020elonginccontributes pages 7-8)
Mechanistically, inhibiting CRM1/exportin-1 with leptomycin B partially traps Elongin C back in nucleoli during infection, supporting an export- or retention-based relocalization mechanism. (schoen2020elonginccontributes pages 8-11)
A 2024 Nature Structural & Molecular Biology study provided quantitative kinetic and cellular evidence that CAND1 binds unneddylated CUL2 and prevents stable assembly of CUL2 with the VHL•ELOB•ELOC (VBC) substrate-receptor module, functioning as an inhibitor of CRL2 (contrasting with the exchange-factor role of CAND1 in CRL1). (wang2024cand1inhibitscullin2ring pages 3-4)
Key quantitative findings relevant to CRL2^VHL (hence ELOC-containing CRL2):
- CRL2^VHL assembly is biphasic with reported parameters kon,fast = 1.1×10^6 M−1 s−1, kon,slow = 0.015 s−1, and koff = 5.7×10−4 s−1 (t1/2 ≈ 20 min). (wang2024cand1inhibitscullin2ring pages 6-8)
- Adding CAND1 can accelerate VBC dissociation from CUL2 dramatically (maximum observed rate ~0.15 s−1; KM ~60 nM), effectively increasing the dissociation rate from 5.7×10−4 s−1 to ~0.15 s−1 in the in vitro assay context. (wang2024cand1inhibitscullin2ring pages 6-8)
- In cells, CAND1 knockout accelerated PROTAC-induced degradation (e.g., ARV-771-induced BRD2 degradation showed 34% reduction in t1/2 and 42% lower plateau versus WT), demonstrating that CRL2^VHL regulatory dynamics can strongly affect induced proximity pharmacology. (wang2024cand1inhibitscullin2ring pages 3-4)
These data support an emerging view that ELOC-containing CRL2 activity is shaped not only by receptor affinity, but also by assembly/disassembly control and neddylation state, with consequences for both endogenous substrates and drug-induced neo-substrates. (wang2024cand1inhibitscullin2ring pages 9-11, wang2024cand1inhibitscullin2ring pages 6-8)
A 2024 Virchows Archiv review emphasizes that the 2022 WHO classification incorporated “molecularly defined” renal tumor entities, explicitly including ELOC-mutated RCC, underscoring the clinical shift toward NGS-based classification. (zhang2024genomicalterationsand pages 1-3)
The review also notes that ELOC (formerly TCEB1) is located on chromosome 8, encodes elongin C as a crucial component of the VHL complex, and that ELOC mutations often occur in the VHL-binding site, consistent with disruption of the VHL–HIF axis. (zhang2024genomicalterationsand pages 5-6)
A 2024 Nature Reviews Nephrology synthesis reports that:
- ELOC is deleted in ~40% of ccRCC (consistent with chromosome 8 loss), and inactivating ELOC mutations occur in ~3% of ccRCC; ELOC and VHL mutations are mutually exclusive. (coffey2024metabolicalterationsin pages 4-6)
- Because loss of ELOC collapses the pVHL-associated E3 ligase complex and stabilizes HIF, the authors suggest that HIF2α inhibitors used in VHL syndrome could be therapeutic for ELOC-mutated RCC. (coffey2024metabolicalterationsin pages 4-6)
The same review summarizes clinical performance of HIF2α inhibition in VHL-associated disease and sporadic ccRCC:
- In VHL syndrome-associated ccRCC, belzutifan reduced tumor growth in 49% of patients and stabilized disease in another 49% for 2 years, and received FDA approval in 2021 for VHL syndrome-associated ccRCC. (coffey2024metabolicalterationsin pages 4-6)
- In sporadic/metastatic ccRCC, a PT2977 analog (PT2385) produced complete, partial, and stable responses in 2%, 12%, and 52% of patients, respectively, with 34% resistance in that context (versus ~2% resistance in VHL-associated ccRCC reported in the synthesis). (coffey2024metabolicalterationsin pages 4-6)
ELOC-mutated RCC is now treated as a molecularly defined renal tumor entity in contemporary diagnostic frameworks (WHO 2022). This creates direct real-world applications:
- Using NGS to identify defining ELOC variants (e.g., p.Y79C) when morphology overlaps with other RCC types. (zhang2024genomicalterationsand pages 3-5, zhang2024genomicalterationsand pages 1-3)
- Incorporating ELOC/TCEB1 findings into differential diagnosis, consistent with the broader move toward genotype-informed renal tumor classification. (zhang2024genomicalterationsand pages 5-6, zhang2024genomicalterationsand pages 1-3)
Because ELOC loss impairs CRL2^VHL and stabilizes HIF, the current expert synthesis supports therapeutic inference that HIF2α inhibitors (e.g., belzutifan) used in VHL syndrome may be relevant for ELOC-mutant RCC, even though the clinical evidence base is largely derived from VHL pathway contexts. (coffey2024metabolicalterationsin pages 4-6)
CRL2^VHL is a widely used E3 ligase system for targeted protein degradation. The 2024 mechanistic findings on CAND1-mediated inhibition demonstrate that cellular CRL2^VHL availability and dynamics can materially affect degradation kinetics and depth for VHL-recruiting PROTACs, suggesting that ELOC-containing complex regulation is a practical consideration in degrader design and interpretation. (wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 9-11)
Note: These data are context-specific (cell type, infection), but they provide direct experimental support for at least one physiological localization state and its perturbability. (schoen2020elonginccontributes pages 7-8, schoen2020elonginccontributes pages 11-12)
Across reviews and mechanistic studies, ELOC emerges as a reused adaptor subunit—analogous in concept to other adaptor proteins (e.g., SKP1)—that enables modular recruitment of many distinct substrate receptors to a limited set of cullin scaffolds. This reuse explains why:
- ELOC mutations can phenocopy defects in specific receptors (e.g., VHL) by collapsing the assembly interface. (coffey2024metabolicalterationsin pages 4-6)
- ELOC dynamics can affect drug-induced ubiquitination (PROTACs) by altering assembly/disassembly kinetics and the effective concentration of ligase-competent CRL2^VHL. (wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 9-11)
The disease genetics and renal-cancer literature converge on a mechanistic model: ELOC mutations at the VHL-binding interface (e.g., Y79C) impair CRL2^VHL assembly/function, stabilizing HIF and driving a “pseudohypoxic” transcriptional/metabolic state typical of VHL pathway disruption. This supports both diagnostic classification and therapeutic inference (HIF-2α targeting). (andreou2022elonginc(eloctceb1)associated pages 2-4, coffey2024metabolicalterationsin pages 4-6, zhang2024genomicalterationsand pages 5-6)
The table below consolidates ELOC’s major functional contexts, key interfaces, and quantitative evidence.
| Functional context/complex | Core role of ELOC | Key binding interfaces/motifs/residues | Representative recent sources (date, URL) | Key quantitative/statistical data |
|---|---|---|---|---|
| Elongin ABC transcription elongation factor | ELOC (Elongin C/TCEB1) forms the Elongin BC heterodimer with ELOB and stabilizes/assembles Elongin A-containing complexes involved in transcription elongation; it also serves as the BC-box-binding subunit used by BC-box proteins in transcription-linked complexes. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 51-54, bi2026dysregulationofthe pages 4-5) | BC-box recognition surface on ELOC; hydrophobic BC-box pocket mapped to residues including Y76, L102, A107 in peptide/HDX studies; ELOC is the central adaptor subunit of the ELOB/C module. (fischer2023decipheringthemolecular pages 76-79, fischer2023decipheringthemolecular pages 79-82) | Kim et al., 2025, https://doi.org/10.1038/s41598-025-88166-2; Fischer, 2023, https://doi.org/10.17192/z2023.0625; Beringer et al., 2016, https://doi.org/10.1016/j.molcel.2016.10.018 (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 76-79, fischer2023decipheringthemolecular pages 51-54) | No robust gene-specific kinetics reported here; role is primarily structural/adaptor rather than catalytic. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 51-54) |
| CRL2^VHL (VHL–ELOB/C–CUL2–RBX1) | ELOC is the adaptor that bridges VHL-box substrate receptors such as pVHL to CUL2, enabling assembly of the CRL2^VHL E3 ligase that targets HIF-α for ubiquitination and proteasomal degradation. Loss or mutation of ELOC destabilizes this pathway and phenocopies VHL deficiency. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 54-57, andreou2022elonginc(eloctceb1)associated pages 4-7, andreou2022elonginc(eloctceb1)associated pages 2-4) | ELOC residues Glu64, Met105, Phe109 contact CUL2; Tyr79 is a conserved hotspot residue in ELOC that hydrogen-bonds with pVHL Pro154; BC-box/VHL-box interactions position VHL on ELOC. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 67-70, andreou2022elonginc(eloctceb1)associated pages 2-4, andreou2022elonginc(eloctceb1)associated media cca6df01) | Andreou et al., 2022, https://doi.org/10.1093/hmg/ddac066; Wang et al., 2024, https://doi.org/10.1038/s41594-023-01167-5; Coffey & Simon, 2024, https://doi.org/10.1038/s41581-023-00800-2 (andreou2022elonginc(eloctceb1)associated pages 4-7, andreou2022elonginc(eloctceb1)associated pages 2-4, coffey2024metabolicalterationsin pages 4-6, wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 6-8) | In RCC cohorts, ELOC is deleted in ~40% of ccRCC and inactivating ELOC mutations occur in ~3% of ccRCC; ELOC and VHL mutations are mutually exclusive. In the 100,000 Genomes RCC cohort, 8/1336 RCCs had candidate pathogenic somatic ELOC variants; 4 carried p.Tyr79Cys. Belzutifan data cited for VHL-associated ccRCC: 49% tumor shrinkage, 49% stable disease over 2 years; 14 active/recruiting Belzutifan RCC trials. CRL2^VHL assembly kinetics: kon,fast = 1.1×10^6 M^-1 s^-1, kon,slow = 0.015 s^-1, koff = 5.7×10^-4 s^-1, t1/2 ≈ 20 min. (andreou2022elonginc(eloctceb1)associated pages 2-4, coffey2024metabolicalterationsin pages 4-6, wang2024cand1inhibitscullin2ring pages 9-11, wang2024cand1inhibitscullin2ring pages 6-8) |
| CRL5^SOCS / SOCS-box ligases | ELOC, as part of the ELOB/C adaptor, recruits SOCS-box proteins to CUL5/RBX2 complexes, linking cytokine-signaling substrate receptors to CRL5-mediated ubiquitination. This places ELOC in pathways such as JAK/STAT and broader cytokine signaling. (kim2025identificationofnovel pages 4-6, fischer2023decipheringthemolecular pages 57-59, andreou2022elonginc(eloctceb1)associated pages 4-7) | SOCS-box proteins use a BC-box to bind ELOB/C and a CUL5-box (including LPΦP motif features) to bind CUL5; ELOC is the BC-box-engaging adaptor within this bipartite recruitment system. (fischer2023decipheringthemolecular pages 65-67, fischer2023decipheringthemolecular pages 57-59) | Zhou et al., 2024, https://doi.org/10.1038/s41467-024-50556-x; Ramachandran et al., 2023, https://doi.org/10.1038/s41467-023-41894-3; Fischer, 2023, https://doi.org/10.17192/z2023.0625 (fischer2023decipheringthemolecular pages 57-59, fischer2023decipheringthemolecular pages 65-67) | No direct ELOC-specific kinetic constants reported in the cited SOCS-focused excerpts, but structural work confirms conserved EloBC recruitment by SOCS-box receptors and CRL5 assembly logic. (fischer2023decipheringthemolecular pages 57-59, fischer2023decipheringthemolecular pages 65-67) |
| Other CRL cross-regulation / CRL2 control | ELOC is itself regulated as a shared CRL component: CRL4^AMBRA1 can polyubiquitinate and degrade ELOC, thereby attenuating CRL5 complex assembly/activity. In CRL2, ELOC-containing VBC assembly is additionally controlled by CAND1 and cullin neddylation, which regulate complex disassembly/reassembly and substrate selectivity. (chen2018crl4ambra1targetselongin pages 1-2, wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 9-11, wang2024cand1inhibitscullin2ring pages 6-8) | CAND1 binds unneddylated CUL2 and is incompatible with stable VBC occupancy; VBC plus neddylation promote CUL2•CAND1 disassembly. ELOC isoform usage also affects CUL2 affinity. (wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 8-9, wang2024cand1inhibitscullin2ring pages 4-6, wang2024cand1inhibitscullin2ring pages 6-8) | Wang et al., 2024, https://doi.org/10.1038/s41594-023-01167-5; Chen et al., 2018, https://doi.org/10.15252/embj.201797508; Lin & Komives, 2024, https://doi.org/10.1016/j.sbi.2024.102879 (chen2018crl4ambra1targetselongin pages 1-2, lin2024diversityofstructure pages 3-5, wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 6-8) | CAND1 knockout accelerated ARV-771-induced BRD2 degradation with 34% lower t1/2 and 42% lower plateau; after 18 h BRD2 levels were 50–60% lower. Natural CRL2 substrate half-lives were reduced by 57% (CODD) and 87% (MIC19) in DKO cells. CAND1 increased VBC dissociation from 5.7×10^-4 s^-1 to 0.15 s^-1 (KM ≈ 60 nM); neddylation increased CRL2^VHL t1/2 ~3.5-fold and reduced CUL2•CAND1 half-life from 20 min to 4 min when combined with VBC. ELOC17-112 weakened CUL2•VBC affinity ~10-fold versus ELOC1-112. (wang2024cand1inhibitscullin2ring pages 3-4, wang2024cand1inhibitscullin2ring pages 8-9, wang2024cand1inhibitscullin2ring pages 9-11, wang2024cand1inhibitscullin2ring pages 4-6, wang2024cand1inhibitscullin2ring pages 6-8) |
| Viral hijacking / host-pathogen interactions | Viral proteins exploit or perturb ELOC-containing ligases. HIV-1 Vif uses CRL5 containing ELOC/ELOB; La Crosse virus NSs functionally depends in part on ELOC for RNAPII RPB1 degradation and relocalizes ELOC from nucleolar speckles. (chen2018crl4ambra1targetselongin pages 1-2, fischer2023decipheringthemolecular pages 65-67, schoen2020elonginccontributes pages 7-8, schoen2020elonginccontributes pages 1-2) | Viral BC-box-like interactions with EloBC are documented for Vif; in LACV infection, ELOC relocalizes from nucleolin-overlapping nucleolar speckles and this can be partially trapped by leptomycin B, implying CRM1-dependent export/redistribution. (fischer2023decipheringthemolecular pages 65-67, schoen2020elonginccontributes pages 7-8, schoen2020elonginccontributes pages 8-11, schoen2020elonginccontributes pages 11-12) | Schoen et al., 2020, https://doi.org/10.1128/jvi.02134-19; Chen et al., 2018, https://doi.org/10.15252/embj.201797508; Fischer, 2023, https://doi.org/10.17192/z2023.0625 (chen2018crl4ambra1targetselongin pages 1-2, fischer2023decipheringthemolecular pages 65-67, schoen2020elonginccontributes pages 7-8, schoen2020elonginccontributes pages 8-11) | In HuH-7 cells, endogenous ELOC shows nucleolar/nuclear speckles with 1:1 overlap with nucleolin; redistribution was observed after wild-type LACV infection at MOI 1, while α-amanitin (10 µg/mL, 16 h) dissolved speckles but preserved nuclear signal. LMB (16 nM, 1 h pretreatment) partially trapped ELOC in nucleoli. RPB1 degradation began by 1 h post-infection; ELOC depletion partially rescued RNAPII transcription and IFN-β expression. (schoen2020elonginccontributes pages 7-8, schoen2020elonginccontributes pages 8-11, schoen2020elonginccontributes pages 11-12, schoen2020elonginccontributes pages 1-2) |
Table: This table summarizes the main experimentally supported roles of human ELOC/TCEB1 across transcription, CRL2/CRL5 ubiquitin ligases, regulatory cross-talk, and viral hijacking. It also captures key interfaces and recent quantitative findings useful for functional annotation.
A structural view of the ELOC–pVHL interface highlighting ELOC Tyr79 (hotspot mutated to Cys in RCC/VHL-like phenotypes) is available in Andreou et al. 2022 (Figure 3D). (andreou2022elonginc(eloctceb1)associated media cca6df01)
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(coffey2024metabolicalterationsin pages 4-6): Nathan J. Coffey and M. Celeste Simon. Metabolic alterations in hereditary and sporadic renal cell carcinoma. Nature reviews. Nephrology, 20:233-250, Jan 2024. URL: https://doi.org/10.1038/s41581-023-00800-2, doi:10.1038/s41581-023-00800-2. This article has 46 citations.
(zhang2024genomicalterationsand pages 3-5): Xingming Zhang, Hella A. Bolck, Niels J. Rupp, and Holger Moch. Genomic alterations and diagnosis of renal cancer. Virchows Archiv, 484:323-337, Nov 2024. URL: https://doi.org/10.1007/s00428-023-03700-9, doi:10.1007/s00428-023-03700-9. This article has 20 citations and is from a peer-reviewed journal.
(schoen2020elonginccontributes pages 11-12): Andreas Schoen, Simone Lau, Paul Verbruggen, and Friedemann Weber. Elongin c contributes to rna polymerase ii degradation by the interferon antagonist nss of la crosse orthobunyavirus. Journal of Virology, Mar 2020. URL: https://doi.org/10.1128/jvi.02134-19, doi:10.1128/jvi.02134-19. This article has 28 citations and is from a domain leading peer-reviewed journal.
(fischer2023decipheringthemolecular pages 51-54): Sabrina Fischer. Deciphering the molecular mechanisms of cancer and developing precision therapeutics. Text, Jul 2023. URL: https://doi.org/10.17192/z2023.0625, doi:10.17192/z2023.0625. This article has 0 citations and is from a peer-reviewed journal.
(bi2026dysregulationofthe pages 4-5): Yege Bi, Rui Wang, Lu Li, Lili Wang, Xingwang Chen, Xiaomei Nie, Jia Meng, and Shanjun Cai. Dysregulation of the ubiquitin-proteasome system in von hippel-lindau syndrome: molecular insights and clinical perspectives. Clinical and Experimental Medicine, Dec 2026. URL: https://doi.org/10.1007/s10238-025-01978-4, doi:10.1007/s10238-025-01978-4. This article has 1 citations and is from a peer-reviewed journal.
(fischer2023decipheringthemolecular pages 76-79): Sabrina Fischer. Deciphering the molecular mechanisms of cancer and developing precision therapeutics. Text, Jul 2023. URL: https://doi.org/10.17192/z2023.0625, doi:10.17192/z2023.0625. This article has 0 citations and is from a peer-reviewed journal.
(fischer2023decipheringthemolecular pages 79-82): Sabrina Fischer. Deciphering the molecular mechanisms of cancer and developing precision therapeutics. Text, Jul 2023. URL: https://doi.org/10.17192/z2023.0625, doi:10.17192/z2023.0625. This article has 0 citations and is from a peer-reviewed journal.
(fischer2023decipheringthemolecular pages 67-70): Sabrina Fischer. Deciphering the molecular mechanisms of cancer and developing precision therapeutics. Text, Jul 2023. URL: https://doi.org/10.17192/z2023.0625, doi:10.17192/z2023.0625. This article has 0 citations and is from a peer-reviewed journal.
(wang2024cand1inhibitscullin2ring pages 8-9): Kankan Wang, Stephanie Diaz, Lihong Li, Jeremy R. Lohman, and Xing Liu. Cand1 inhibits cullin-2-ring ubiquitin ligases for enhanced substrate specificity. Nature Structural & Molecular Biology, pages 1-13, Jan 2024. URL: https://doi.org/10.1038/s41594-023-01167-5, doi:10.1038/s41594-023-01167-5. This article has 5 citations and is from a highest quality peer-reviewed journal.
(wang2024cand1inhibitscullin2ring pages 4-6): Kankan Wang, Stephanie Diaz, Lihong Li, Jeremy R. Lohman, and Xing Liu. Cand1 inhibits cullin-2-ring ubiquitin ligases for enhanced substrate specificity. Nature Structural & Molecular Biology, pages 1-13, Jan 2024. URL: https://doi.org/10.1038/s41594-023-01167-5, doi:10.1038/s41594-023-01167-5. This article has 5 citations and is from a highest quality peer-reviewed journal.
(schoen2020elonginccontributes pages 1-2): Andreas Schoen, Simone Lau, Paul Verbruggen, and Friedemann Weber. Elongin c contributes to rna polymerase ii degradation by the interferon antagonist nss of la crosse orthobunyavirus. Journal of Virology, Mar 2020. URL: https://doi.org/10.1128/jvi.02134-19, doi:10.1128/jvi.02134-19. This article has 28 citations and is from a domain leading peer-reviewed journal.
id: Q15369
gene_symbol: ELOC
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: ELOC encodes Elongin C, the SKP1-like adaptor subunit of the Elongin BC module. Together with ELOB, ELOC bridges BC-box, VHL-box, and SOCS-box substrate receptors to Cul2 or Cul5 Cullin-RING ubiquitin ligase scaffolds, while also participating in Elongin transcription elongation complexes.
alternative_products:
- name: '1'
id: Q15369-1
- name: '2'
id: Q15369-2
sequence_note: VSP_045955
existing_annotations:
- term:
id: GO:0006511
label: ubiquitin-dependent protein catabolic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Accepted as a pathway-level consequence. ELOC-containing CRL2/CRL5 complexes target substrates for ubiquitination and downstream proteasomal degradation.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "A central and well-established role of ELOC is within the **VHL\u2013ELOB/ELOC\u2013CUL2\u2013RBX1** E3 ubiquitin ligase"
- term:
id: GO:0070449
label: elongin complex
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.'
- term:
id: GO:0030674
label: protein-macromolecule adaptor activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Correct and informative. ELOC acts as a protein-macromolecule adaptor within Elongin BC, bridging BC-box/VHL-box/SOCS-box substrate receptors to Cul2/Cul5 CRL scaffolds.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- term:
id: GO:0000151
label: ubiquitin ligase complex
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: Correct but broad. ELOC is better captured as an adaptor subunit in specific Cul2/Cul5 ubiquitin ligase complexes rather than by the generic ubiquitin ligase complex term alone.
action: MARK_AS_OVER_ANNOTATED
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: More specific Cul2-RING, Cul5-RING, and Elongin complex annotations capture the supported complex membership.
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: Supported. ELOC has nuclear functions in Elongin/CRL assemblies and has experimentally observed nuclear/nucleolar localization.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: Correct but less precise than the available cytosol and nuclear/nucleoplasm localization annotations.
action: MARK_AS_OVER_ANNOTATED
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Use cytosol and nucleus/nucleoplasm annotations where available rather than generic cytoplasm.
- term:
id: GO:0006511
label: ubiquitin-dependent protein catabolic process
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: Accepted as a pathway-level consequence. ELOC-containing CRL2/CRL5 complexes target substrates for ubiquitination and downstream proteasomal degradation.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "A central and well-established role of ELOC is within the **VHL\u2013ELOB/ELOC\u2013CUL2\u2013RBX1** E3 ubiquitin ligase"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10205047
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12004076
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12050673
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12149480
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15601820
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16189514
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16643902
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17183367
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19159283
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19322197
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19327355
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20211142
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21145461
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21516116
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21822215
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21988832
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22190034
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23460923
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23563313
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25416956
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28514442
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31515488
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31980649
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32353859
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33060197
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33827988
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:36217030
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:40205054
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0016567
label: protein ubiquitination
evidence_type: IEA
original_reference_id: GO_REF:0000041
review:
summary: Accepted. ELOC is not the catalytic ubiquitin-transfer subunit, but it is required as an Elongin BC adaptor component of CRL2/CRL5 ligases that mediate substrate ubiquitination.
action: ACCEPT
reason: Keep the process annotation because ELOC is a direct required module in
CRL ubiquitination complexes. Do not add GO:1990756 for ELOC itself, because
substrate recognition is supplied by SOCS-box, VHL-box, or related substrate
receptor proteins rather than by ELOC.
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "ELOC\u2019s primary biochemical function in these contexts is **protein\u2013protein interaction and complex assembly**, not ubiquitin transfer catalysis per se."
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0070449
label: elongin complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:40963025
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: NAS
original_reference_id: PMID:28591624
review:
summary: Kept as non-core. Negative transcriptional regulation can arise in specific Elongin-associated contexts, but it is not the central ELOC molecular function.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: NAS
original_reference_id: PMID:31273098
review:
summary: Supported as a non-core consequence of ELOC-containing CRL activity. ELOC is an adaptor/regulatory subunit rather than the proteasome or catalytic ubiquitin-transfer component.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "A central and well-established role of ELOC is within the **VHL\u2013ELOB/ELOC\u2013CUL2\u2013RBX1** E3 ubiquitin ligase"
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:15601820
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:21822215
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:22649776
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:29779948
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:33398168
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: NAS
original_reference_id: PMID:34743205
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:1990116
label: ribosome-associated ubiquitin-dependent protein catabolic process
evidence_type: NAS
original_reference_id: PMID:33909987
review:
summary: Supported as a non-core specialized CRL pathway context. ELOC contributes through Elongin BC adaptor function in substrate-specific ligase assemblies.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- term:
id: GO:2000104
label: negative regulation of DNA-templated DNA replication
evidence_type: NAS
original_reference_id: PMID:22649776
review:
summary: Kept as non-core. Negative regulation of DNA-templated DNA replication is likely a downstream substrate-specific consequence of ELOC-containing ligase activity rather than ELOC's primary molecular role.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "ELOC\u2019s primary biochemical function in these contexts is **protein\u2013protein interaction and complex assembly**, not ubiquitin transfer catalysis per se."
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:39039081
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:40440427
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031462
label: Cul2-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:37844242
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul2-RING ligase assemblies such as CRL2-VHL.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0140627
label: ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
evidence_type: IDA
original_reference_id: PMID:37844242
review:
summary: Supported as a non-core specialized CRL2 pathway context. ELOC participates through the shared Elongin BC adaptor module, not as the substrate receptor itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:35512830
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:37816714
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:34857742
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:21980433
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:25505247
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:38418882
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:31387940
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:32513959
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:23837592
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:33268465
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0140958
label: target-directed miRNA degradation
evidence_type: IMP
original_reference_id: PMID:33184237
review:
summary: Kept as non-core. Target-directed miRNA degradation is a specialized pathway context for an ELOC-containing CRL assembly rather than the general function of ELOC itself.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22510880
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0001222
label: transcription corepressor binding
evidence_type: IPI
original_reference_id: PMID:7660122
review:
summary: Kept as non-core. ELOC can participate in transcriptional regulatory complexes, but its primary role is the Elongin BC adaptor/regulatory module.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- term:
id: GO:0006367
label: transcription initiation at RNA polymerase II promoter
evidence_type: IDA
original_reference_id: PMID:7660122
review:
summary: Remove. The cited PMID:7660122 paper concerns VHL inhibition of Elongin-dependent
RNA polymerase II transcription elongation, not transcription initiation.
action: REMOVE
reason: 'Evidence-term mismatch: PMID:7660122 supports transcription elongation biology,
not GO:0006367 transcription initiation at RNA polymerase II promoter.'
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0070449
label: elongin complex
evidence_type: IDA
original_reference_id: PMID:7660122
review:
summary: Correct. ELOC is Elongin C, the SKP1-like subunit of the Elongin BC module and Elongin complex.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.'
- term:
id: GO:0016567
label: protein ubiquitination
evidence_type: IDA
original_reference_id: PMID:30166453
review:
summary: Accepted. ELOC is not the catalytic ubiquitin-transfer subunit, but it is required as an Elongin BC adaptor component of CRL2/CRL5 ligases that mediate substrate ubiquitination.
action: ACCEPT
reason: Keep the process annotation because ELOC is a direct required module in
CRL ubiquitination complexes. Do not add GO:1990756 for ELOC itself, because
substrate recognition is supplied by SOCS-box, VHL-box, or related substrate
receptor proteins rather than by ELOC.
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "ELOC\u2019s primary biochemical function in these contexts is **protein\u2013protein interaction and complex assembly**, not ubiquitin transfer catalysis per se."
- term:
id: GO:0031466
label: Cul5-RING ubiquitin ligase complex
evidence_type: IDA
original_reference_id: PMID:30166453
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul5-RING ligase assemblies recruited by SOCS-box proteins.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL5** uses **CUL5** and **RBX2/SAG**, and commonly uses **SOCS-box** substrate receptors that recruit **ELOB/ELOC** as adaptors.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21119685
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0031462
label: Cul2-RING ubiquitin ligase complex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: Correct. ELOC is the adaptor subunit of Elongin BC in Cul2-RING ligase assemblies such as CRL2-VHL.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**CRL2** uses **CUL2** as scaffold and **RBX1** as the RING component, and uniquely uses **ELOB/ELOC** as adaptor proteins for substrate receptors like VHL.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21199876
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234159
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234163
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234173
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234175
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234177
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234183
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-180540
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-180555
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-180603
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8952039
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8952044
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8952625
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8952626
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8955241
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8955289
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956040
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956099
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956103
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956106
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9705738
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9755303
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9833107
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9833155
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9954721
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9954723
review:
summary: Supported. ELOC-containing CRL2/CRL5 complexes and their substrate receptor assemblies operate in cytosolic as well as nuclear contexts.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112379
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112385
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112392
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112395
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112396
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112435
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-112436
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-113411
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-113412
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-113413
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-113414
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-113429
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234169
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234172
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234175
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6797606
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6797616
review:
summary: Supported. ELOC has a prominent nuclear/nucleoplasmic pool consistent with Elongin transcriptional and nuclear CRL functions.
action: ACCEPT
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: In human **HuH-7** cells, endogenous Elongin C shows **nuclear/nucleolar-like speckles** with **1:1 overlap with nucleolin**.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15590694
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10851083
review:
summary: Protein binding is too generic for ELOC. The informative annotation is Elongin BC adaptor activity and specific Cul2/Cul5 ligase complex membership.
action: REMOVE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
reason: Replace generic binding with specific adaptor and CRL complex annotations.
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: TAS
original_reference_id: PMID:7660129
review:
summary: Kept as non-core. Regulation of RNA polymerase II transcription is a supported broader context, but ELOC is best captured by Elongin BC adaptor and CRL complex roles.
action: KEEP_AS_NON_CORE
additional_reference_ids:
- file:human/ELOC/ELOC-deep-research-falcon.md
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO terms
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000041
title: Gene Ontology annotation based on UniPathway vocabulary mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: PMID:10205047
title: 'Structure of the VHL-ElonginC-ElonginB complex: implications for VHL tumor suppressor function.'
findings: []
- id: PMID:10851083
title: Tracheal development and the von Hippel-Lindau tumor suppressor homolog in Drosophila.
findings: []
- id: PMID:12004076
title: 'Structure of an HIF-1alpha -pVHL complex: hydroxyproline recognition in signaling.'
findings: []
- id: PMID:12050673
title: Structural basis for the recognition of hydroxyproline in HIF-1 alpha by pVHL.
findings: []
- id: PMID:12149480
title: Mammalian mediator subunit mMED8 is an Elongin BC-interacting protein that can assemble with Cul2 and Rbx1 to reconstitute a ubiquitin ligase.
findings: []
- id: PMID:15590694
title: Suppressors of cytokine signaling 4 and 5 regulate epidermal growth factor receptor signaling.
findings: []
- id: PMID:15601820
title: VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases.
findings: []
- id: PMID:16189514
title: Towards a proteome-scale map of the human protein-protein interaction network.
findings: []
- id: PMID:16643902
title: The E3 ubiquitin ligase HOIL-1 induces the polyubiquitination and degradation of SOCS6 associated proteins.
findings: []
- id: PMID:17183367
title: COMMD1 promotes the ubiquitination of NF-kappaB subunits through a cullin-containing ubiquitin ligase.
findings: []
- id: PMID:19159283
title: 'Array MAPPIT: high-throughput interactome analysis in mammalian cells.'
findings: []
- id: PMID:19322197
title: Termination of NF-kappaB activity through a gammaherpesvirus protein that assembles an EC5S ubiquitin-ligase.
findings: []
- id: PMID:19327355
title: Requirement for microtubule integrity in the SOCS1-mediated intracellular dynamics of HIV-1 Gag.
findings: []
- id: PMID:20211142
title: An atlas of combinatorial transcriptional regulation in mouse and man.
findings: []
- id: PMID:21119685
title: Notch-induced Asb2 expression promotes protein ubiquitination by forming non-canonical E3 ligase complexes.
findings: []
- id: PMID:21145461
title: Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.
findings: []
- id: PMID:21199876
title: Regulation of inducible nitric-oxide synthase by the SPRY domain- and SOCS box-containing proteins.
findings: []
- id: PMID:21516116
title: Next-generation sequencing to generate interactome datasets.
findings: []
- id: PMID:21822215
title: The tumour antigen PRAME is a subunit of a Cul2 ubiquitin ligase and associates with active NFY promoters.
findings: []
- id: PMID:21980433
title: The SOCS2 ubiquitin ligase complex regulates growth hormone receptor levels.
findings: []
- id: PMID:21988832
title: Toward an understanding of the protein interaction network of the human liver.
findings: []
- id: PMID:22190034
title: Global landscape of HIV-human protein complexes.
findings: []
- id: PMID:22510880
title: Nuclear receptor binding protein 1 regulates intestinal progenitor cell homeostasis and tumour formation.
findings: []
- id: PMID:22649776
title: The Role of Elongin BC-Containing Ubiquitin Ligases.
findings: []
- id: PMID:23460923
title: PRAME is a golgi-targeted protein that associates with the Elongin BC complex and is upregulated by interferon-gamma and bacterial PAMPs.
findings: []
- id: PMID:23563313
title: "CCDC22 deficiency in humans blunts activation of proinflammatory NF-\u03BAB signaling."
findings: []
- id: PMID:23837592
title: 'Multimeric complexes among ankyrin-repeat and SOCS-box protein 9 (ASB9), ElonginBC, and Cullin 5: insights into the structure and assembly of ECS-type Cullin-RING E3 ubiquitin ligases.'
findings: []
- id: PMID:25416956
title: A proteome-scale map of the human interactome network.
findings: []
- id: PMID:25505247
title: 'Biophysical studies on interactions and assembly of full-size E3 ubiquitin ligase: suppressor of cytokine signaling 2 (SOCS2)-elongin BC-cullin 5-ring box protein 2 (RBX2).'
findings: []
- id: PMID:28514442
title: Architecture of the human interactome defines protein communities and disease networks.
findings: []
- id: PMID:28591624
title: Crystal Structure of the Cul2-Rbx1-EloBC-VHL Ubiquitin Ligase Complex.
findings: []
- id: PMID:29779948
title: "The Eukaryotic Proteome Is Shaped by E3\_Ubiquitin Ligases Targeting C-Terminal Degrons."
findings: []
- id: PMID:30166453
title: CRL4(AMBRA1) targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling.
findings: []
- id: PMID:31273098
title: A glycine-specific N-degron pathway mediates the quality control of protein N-myristoylation.
findings: []
- id: PMID:31387940
title: BIK ubiquitination by the E3 ligase Cul5-ASB11 determines cell fate during cellular stress.
findings: []
- id: PMID:31515488
title: Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
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title: Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS(G13D).
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title: A reference map of the human binary protein interactome.
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title: A SARS-CoV-2 protein interaction map reveals targets for drug repurposing.
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- id: PMID:32513959
title: Structure and dynamics of the ASB9 CUL-RING E3 Ligase.
findings: []
- id: PMID:33060197
title: Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.
findings: []
- id: PMID:33184237
title: The ZSWIM8 ubiquitin ligase mediates target-directed microRNA degradation.
findings: []
- id: PMID:33268465
title: The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 Ligases.
findings: []
- id: PMID:33398168
title: Molecular basis for arginine C-terminal degron recognition by Cul2(FEM1) E3 ligase.
findings: []
- id: PMID:33827988
title: ORF10-Cullin-2-ZYG11B complex is not required for SARS-CoV-2 infection.
findings: []
- id: PMID:33909987
title: Convergence of mammalian RQC and C-end rule proteolytic pathways via alanine tailing.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
findings: []
- id: PMID:34743205
title: CRL2-KLHDC3 E3 ubiquitin ligase complex suppresses ferroptosis through promoting p14(ARF) degradation.
findings: []
- id: PMID:34857742
title: Discovery of an exosite on the SOCS2-SH2 domain that enhances SH2 binding to phosphorylated ligands.
findings: []
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title: Rab40c regulates focal adhesions and PP6 activity by controlling ANKRD28 ubiquitylation.
findings: []
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title: A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets.
findings: []
- id: PMID:37816714
title: Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2.
findings: []
- id: PMID:37844242
title: Molecular basis for C-degron recognition by CRL2(APPBP2) ubiquitin ligase.
findings: []
- id: PMID:38418882
title: The CRL5-SPSB3 ubiquitin ligase targets nuclear cGAS for degradation.
findings: []
- id: PMID:39039081
title: Molecular insights into degron recognition by CRL5(ASB7) ubiquitin ligase.
findings: []
- id: PMID:40205054
title: Multimodal cell maps as a foundation for structural and functional genomics.
findings: []
- id: PMID:40440427
title: ASB7 is a negative regulator of H3K9me3 homeostasis.
findings: []
- id: PMID:40963025
title: Covariation MS uncovers a protein that controls cysteine catabolism.
findings: []
- id: PMID:7660122
title: Inhibition of transcription elongation by the VHL tumor suppressor protein.
findings: []
- id: PMID:7660129
title: 'Elongin (SIII): a multisubunit regulator of elongation by RNA polymerase II.'
findings: []
- id: Reactome:R-HSA-112379
title: Recruitment of elongation factors to form elongation complex
findings: []
- id: Reactome:R-HSA-112385
title: Addition of nucleotides leads to transcript elongation
findings: []
- id: Reactome:R-HSA-112392
title: Resumption of elongation after recovery from pausing
findings: []
- id: Reactome:R-HSA-112395
title: Abortive termination of elongation after arrest
findings: []
- id: Reactome:R-HSA-112396
title: Separation of elongating transcript from template
findings: []
- id: Reactome:R-HSA-112435
title: Formation of Elongin BC complex
findings: []
- id: Reactome:R-HSA-112436
title: Formation of Elongin complex
findings: []
- id: Reactome:R-HSA-113411
title: 2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing
findings: []
- id: Reactome:R-HSA-113412
title: Pol II elongation complex moves on the template as transcript elongates
findings: []
- id: Reactome:R-HSA-113413
title: TFIIS-mediated recovery of elongation from arrest
findings: []
- id: Reactome:R-HSA-113414
title: 7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest
findings: []
- id: Reactome:R-HSA-113429
title: Elongating transcript encounters a lesion in the template
findings: []
- id: Reactome:R-HSA-1234159
title: Proteasome proteolyzes ub-HIF-alpha
findings: []
- id: Reactome:R-HSA-1234163
title: Cytosolic VBC complex ubiquitinylates hydroxyprolyl-HIF-alpha
findings: []
- id: Reactome:R-HSA-1234169
title: Nuclear VHL:EloB,C:CUL2:RBX1 binds hydroxyprolyl-HIF-alpha
findings: []
- id: Reactome:R-HSA-1234172
title: Nuclear VBC complex ubiquitinylates HIF-alpha
findings: []
- id: Reactome:R-HSA-1234173
title: Cytosolic PHD2,3 hydroxylates proline residues on HIF3A
findings: []
- id: Reactome:R-HSA-1234175
title: ub-hydroxyPro-HIF-alpha:VHL:EloB,C:CUL2:RBX1 translocates from the nucleus to the cytosol
findings: []
- id: Reactome:R-HSA-1234177
title: Cytosolic PHD2,3 hydroxylates proline residues on HIF1A
findings: []
- id: Reactome:R-HSA-1234183
title: Cytosolic VHL:EloB,C:CUL2:RBX1 binds hydroxyprolyl-HIF-alpha
findings: []
- id: Reactome:R-HSA-180540
title: Multi-ubiquitination of APOBEC3G
findings: []
- id: Reactome:R-HSA-180555
title: Association of APOBEC3G:Vif with the Cul5-SCF complex
findings: []
- id: Reactome:R-HSA-180603
title: Proteosome-mediated degradation of APOBEC3G
findings: []
- id: Reactome:R-HSA-6797606
title: CDK12 phosphorylates RNA Pol II CTD at DNA repair genes
findings: []
- id: Reactome:R-HSA-6797616
title: CCNK:CDK12 binds RNA Pol II at DNA repair genes
findings: []
- id: Reactome:R-HSA-8952039
title: NEDD8:AcM-UBE2F binds CRL5 E3 ubiquitin ligase complex
findings: []
- id: Reactome:R-HSA-8952044
title: AcM-UBE2F transfers NEDD8 to CRL5 E3 ubiquitin ligase complex
findings: []
- id: Reactome:R-HSA-8952625
title: NEDD8:AcM-UBE2M binds CRL2 E3 ubiquitin ligase complex
findings: []
- id: Reactome:R-HSA-8952626
title: AcM-UBE2M transfers NEDD8 to CRL2 E3 ubiquitin ligase complex
findings: []
- id: Reactome:R-HSA-8955241
title: CAND1 binds cytosolic CRL E3 ubiquitin ligases
findings: []
- id: Reactome:R-HSA-8955289
title: COMMDs displace CAND1 from cytosolic CRL E3 ubiquitin ligase complexes
findings: []
- id: Reactome:R-HSA-8956040
title: COP9 signalosome deneddylates cytosolic CRL E3 ubiquitin ligase complexes
findings: []
- id: Reactome:R-HSA-8956099
title: VHL:EloB,C:NEDD8-CUL2:RBX1 complex binds UBXN7
findings: []
- id: Reactome:R-HSA-8956103
title: VHL:EloB,C:NEDD8-CUL2:RBX1 complex binds hydroxyprolyl-HIF-alpha
findings: []
- id: Reactome:R-HSA-8956106
title: VHL:EloB,C:NEDD8-CUL2:RBX1 complex ubiquitinylates HIF-alpha
findings: []
- id: Reactome:R-HSA-9705738
title: SOCS1,3 ubiquitinates CSF3R in SOCS1,3:p-4Y-CSF3R:CSF3 dimer:LYN:p-Y-JAK1:p-JAK2:p-SYK:p-HCK:p-TYK2:CUL5:ELOB:ELOC:RNF7
findings: []
- id: Reactome:R-HSA-9755303
title: 26S proteasome degrades HIFalpha
findings: []
- id: Reactome:R-HSA-9833107
title: Association of NS1 (1C) with Cul5 and SCF
findings: []
- id: Reactome:R-HSA-9833155
title: Ubiquitination of STAT2
findings: []
- id: Reactome:R-HSA-9954721
title: NEDD8-K699-CUL2:ELOB:ELOC:RBX1:KLHDC10 K48 polyubiquitinates alanine-tailed nascent peptide
findings: []
- id: Reactome:R-HSA-9954723
title: NEDD8-K699-CUL2:ELOB:ELOC:RBX1:KLHDC10 binds alanine-tailed nascent peptide
findings: []
- id: file:human/ELOC/ELOC-deep-research-falcon.md
title: Falcon deep research report for human ELOC
findings: []
core_functions:
- description: ELOC is the SKP1-like adaptor subunit of Elongin BC that enables substrate-receptor coupling and assembly of Elongin, CRL2, and CRL5 complexes rather than acting as a ubiquitin-transfer enzyme itself.
supported_by:
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: The literature retrieved here consistently uses **ELOC** as the human gene encoding **Elongin C** (also called **TCEB1**) and describes it as the **Elongin B/C adaptor subunit** that binds **BC-box/VHL-box/SOCS-box** motifs and bridges substrate receptors to **CUL2** or **CUL5** in Cullin-RING ubiquitin ligases (CRLs), matching the UniProt-provided identity and SKP1-like adaptor role.
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: '**ELOC (Elongin C)** forms a heterodimer with **ELOB (Elongin B)**, commonly referred to as the **Elongin BC** module.'
- reference_id: file:human/ELOC/ELOC-deep-research-falcon.md
supporting_text: "ELOC\u2019s primary biochemical function in these contexts is **protein\u2013protein interaction and complex assembly**, not ubiquitin transfer catalysis per se."
molecular_function:
id: GO:0030674
label: protein-macromolecule adaptor activity
directly_involved_in:
- id: GO:0016567
label: protein ubiquitination
- id: GO:0006511
label: ubiquitin-dependent protein catabolic process
locations:
- id: GO:0005654
label: nucleoplasm
- id: GO:0005829
label: cytosol
in_complex:
id: GO:0070449
label: elongin complex
proposed_new_terms: []
suggested_questions:
- question: Which ELOC-containing CRL assemblies are most sensitive to ELOC interface variants such as Y79C, and how do these differ from VHL loss?
experts: []
- question: How separable are ELOC roles in classical Elongin transcription elongation from its dominant CRL2/CRL5 adaptor functions across human cell types?
experts: []
suggested_experiments:
- hypothesis: ELOC interface residues differentially support CRL2-VHL, CRL5-SOCS, and Elongin transcription elongation assemblies.
description: Rescue ELOC-depleted cells with interface mutants and compare VHL-HIF turnover, SOCS-box CRL5 substrate degradation, and RNA polymerase II elongation readouts.
- hypothesis: ELOC promotes ubiquitin-dependent substrate degradation through adaptor-mediated complex assembly rather than catalytic ubiquitin transfer.
description: Reconstitute ELOBC-containing CRL2 and CRL5 complexes with wild-type and mutant ELOC and measure complex formation, substrate receptor recruitment, and ubiquitination kinetics.