EMC10

UniProt ID: Q5UCC4
Organism: Homo sapiens
Review Status: COMPLETE
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Gene Description

EMC10 (ER membrane protein complex subunit 10; also C19orf63, INM02) is a 262 aa single-pass type I ER membrane glycoprotein with a cleavable N-terminal signal peptide, a large lumenal domain (N-glycosylated at Asn-182), a single transmembrane helix, and a short cytoplasmic tail. It is a constitutive lumenal/peripheral subunit of the ER membrane protein complex (EMC), a conserved transmembrane-domain insertase and membrane-protein chaperone that mediates energy-independent insertion of newly synthesized membrane proteins into the ER membrane, including post-translational insertion of tail-anchored proteins and cotranslational insertion and topogenesis of multipass membrane proteins such as G protein-coupled receptors. The membrane insertase activity resides in the EMC3/EMC6 membrane core; EMC10 is a non-catalytic structural subunit whose bulk projects into the ER lumen. An alternatively spliced isoform is secreted (HSS1) and circulates; secreted EMC10 has been characterized as a bone marrow-derived angiogenic growth factor that stimulates endothelial cell migration and outgrowth and promotes tissue repair after myocardial infarction. Biallelic loss-of-function variants in EMC10 cause a neurodevelopmental disorder with dysmorphic facies and variable seizures. EMC10 is broadly expressed, with the membrane form localizing to the ER membrane.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0072546 EMC complex
IBA
GO_REF:0000033
ACCEPT
Summary: EMC10 is a constitutive subunit of the ER membrane protein complex; phylogenetic assignment is consistent with direct experimental and structural evidence. Core structural identity.
Reason: EMC complex membership is the core cellular-component identity of EMC10; supported by IDA, cryo-EM, and the conserved EMC10 family.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Component of the ER membrane protein complex (EMC).
GO:0005576 extracellular region
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: Electronic transfer of the secreted (extracellular) localization from UniProt, reflecting the secreted isoform 2 (HSS1). Genuine but peripheral to the core EMC ER membrane role.
Reason: Real secreted-isoform localization but peripheral to the core EMC insertase function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 2]: Secreted
GO:0005789 endoplasmic reticulum membrane
IEA
GO_REF:0000044
ACCEPT
Summary: Electronic transfer of the ER membrane subcellular location of the membrane isoform from UniProt; the correct and core compartment for EMC10.
Reason: Correct core location; redundant with experimental IDA evidence.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 1]: Endoplasmic reticulum membrane
GO:0005789 endoplasmic reticulum membrane
NAS
PMID:29242231
The ER membrane protein complex is a transmembrane domain in...
ACCEPT
Summary: NAS annotation of ER membrane localization for the EMC, consistent with experimental evidence and the core compartment of EMC10.
Reason: Correct core location; consistent with EXP/IDA evidence.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 1]: Endoplasmic reticulum membrane
GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence
IDA
PMID:29242231
The ER membrane protein complex is a transmembrane domain in...
KEEP AS NON CORE
Summary: The EMC inserts transmembrane domains including stop-transfer membrane-anchor sequences; EMC10 participates as a structural subunit. A genuine EMC whole-complex process.
Reason: Correct EMC process but complex-level; EMC10 is a lumenal/structural subunit contributing via membership rather than catalysis.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
stop-transfer membrane-anchor sequences become ER membrane spanning
GO:0071816 tail-anchored membrane protein insertion into ER membrane
IDA
PMID:29242231
The ER membrane protein complex is a transmembrane domain in...
KEEP AS NON CORE
Summary: The EMC mediates post-translational insertion of tail-anchored proteins; EMC10 participates as a structural subunit. A genuine EMC whole-complex process.
Reason: Correct EMC process but complex-level; EMC10's contribution is via membership.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
post-translational insertion of tail-
GO:0072546 EMC complex
IPI
PMID:32439656
Structural basis for membrane insertion by the human ER memb...
ACCEPT
Summary: ComplexPortal/structural IPI assignment of EMC complex membership based on the cryo-EM structure of the human EMC. Core structural identity.
Reason: Structurally demonstrated core EMC membership.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Component of the ER membrane protein complex (EMC).
GO:0005576 extracellular region
EXP
PMID:19570817
Molecular cloning of a novel secreted peptide, INM02, and re...
KEEP AS NON CORE
Summary: INM02 (EMC10) is detectable in human serum; experimental secreted-form localization. Peripheral to the EMC's core ER membrane role.
Reason: Real secreted-form observation but peripheral to the core EMC insertase function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Present in serum
GO:0005576 extracellular region
EXP
Q5UCC4-2
PMID:20680400
hHSS1: a novel secreted factor and suppressor of glioma grow...
KEEP AS NON CORE
Summary: The alternatively spliced isoform 2 (HSS1) is secreted; experimental evidence of a secreted form. Genuine but isoform-specific and peripheral to the EMC's core ER membrane role.
Reason: Real secreted isoform but peripheral to the core EMC insertase function and specific to isoform 2.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 2]: Secreted
GO:0005576 extracellular region
EXP
PMID:28931551
EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni...
KEEP AS NON CORE
Summary: Secreted EMC10 acts as an extracellular angiogenic growth factor after myocardial infarction. Genuine secreted localization, peripheral to the core EMC role.
Reason: Real secreted-form observation but peripheral to the core EMC insertase function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 2]: Secreted
GO:0032977 membrane insertase activity
IMP
PMID:29809151
The ER membrane protein complex interacts cotranslationally ...
KEEP AS NON CORE
Summary: IMP evidence that EMC subunit depletion impairs membrane insertion; EMC10 contributes to the complex-level insertase activity but is not the catalytic subunit (the EMC3/EMC6 core is catalytic).
Reason: contributes_to is appropriate at complex level; not EMC10's standalone enzymatic core MF, as it is a lumenal/structural subunit.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
energy-independent insertion into endoplasmic
GO:0032977 membrane insertase activity
IMP
PMID:30415835
EMC Is Required to Initiate Accurate Membrane Protein Topoge...
KEEP AS NON CORE
Summary: IMP evidence (topogenesis study) supporting the EMC's membrane insertase activity, to which EMC10 contributes as a structural subunit.
Reason: contributes_to is appropriate at complex level; not EMC10's standalone enzymatic core MF.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
energy-independent insertion into endoplasmic
GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence
IMP
PMID:29809151
The ER membrane protein complex interacts cotranslationally ...
KEEP AS NON CORE
Summary: The EMC is required for cotranslational insertion of multipass proteins in which stop-transfer membrane-anchor sequences become membrane-spanning helices; EMC10 participates as a subunit.
Reason: Correct EMC process but complex-level; EMC10's contribution is via membership.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
stop-transfer membrane-anchor sequences become ER membrane spanning
GO:0005789 endoplasmic reticulum membrane
IDA
PMID:32439656
Structural basis for membrane insertion by the human ER memb...
ACCEPT
Summary: Direct (structural) evidence placing EMC10 in the ER membrane. Core compartment.
Reason: Experimentally supported core location.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 1]: Endoplasmic reticulum membrane
GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence
IMP
PMID:30415835
EMC Is Required to Initiate Accurate Membrane Protein Topoge...
KEEP AS NON CORE
Summary: IMP (topogenesis study) supporting the EMC's role in insertion of stop-transfer membrane-anchor sequences; EMC10 participates as a subunit.
Reason: Correct EMC process but complex-level; EMC10's contribution is via membership.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
stop-transfer membrane-anchor sequences become ER membrane spanning
GO:0001938 positive regulation of endothelial cell proliferation
IDA
PMID:28931551
EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni...
KEEP AS NON CORE
Summary: Secreted EMC10 promotes endothelial cell outgrowth/proliferation in angiogenic assays. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role.
Reason: Real secreted-form activity but peripheral to the core EMC function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Stimulates cardiac endothelial cell migration and outgrowth
GO:0010595 positive regulation of endothelial cell migration
ISS
GO_REF:0000024
KEEP AS NON CORE
Summary: Secreted EMC10 stimulates cardiac endothelial cell migration via p38 MAPK/PAK/MK2 signaling. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role.
Reason: Real secreted-form activity but peripheral to the core EMC function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Stimulates cardiac endothelial cell migration and outgrowth
GO:0045766 positive regulation of angiogenesis
IMP
PMID:28931551
EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni...
KEEP AS NON CORE
Summary: Loss/gain-of-function evidence that secreted EMC10 promotes angiogenesis and tissue repair after myocardial infarction. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role.
Reason: Experimentally supported but pertains to the secreted form and is peripheral to the core EMC function.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Promotes angiogenesis and tissue repair in the heart
GO:0016020 membrane
IDA
PMID:22119785
Defining human ERAD networks through an integrative mapping ...
KEEP AS NON CORE
Summary: Direct generic membrane localization from the EMC-discovery study; a parent of the specific ER membrane term.
Reason: Correct but generic; the ER membrane term captures the informative localization.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
[Isoform 1]: Endoplasmic reticulum membrane
GO:0072546 EMC complex
IDA
PMID:22119785
Defining human ERAD networks through an integrative mapping ...
ACCEPT
Summary: Direct experimental identification of EMC10 in the EMC by the foundational ERAD-network mapping study. Core structural identity.
Reason: Core EMC membership; directly demonstrated.
Supporting Evidence:
file:human/EMC10/EMC10-uniprot.txt
Component of the ER membrane protein complex (EMC).

Core Functions

Constitutive lumenal/peripheral subunit of the ER membrane protein complex (EMC), localizing to the ER membrane and contributing to the EMC-mediated insertion and biogenesis of membrane proteins.

Molecular Function:
structural molecule activity
In Complex:
EMC complex
Supporting Evidence:
  • file:human/EMC10/EMC10-uniprot.txt
    Component of the ER membrane protein complex (EMC).

References

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Suggested Questions for Experts

Q: Is the secreted/angiogenic activity of EMC10 mechanistically independent of its EMC insertase role, and does the NEDDFAS neurodevelopmental phenotype arise from loss of EMC-mediated membrane protein biogenesis, loss of the secreted factor, or both?

Q: What is the structural contribution of EMC10's lumenal domain to EMC stability and substrate handling?

Suggested Experiments

Experiment: Separate the membrane (EMC) and secreted (HSS1) functions using isoform-specific or domain-targeted knock-ins, and assess effects on EMC client biogenesis versus angiogenesis/endothelial signaling.

Experiment: Define the EMC10-dependent client repertoire by quantitative membrane proteomics in EMC10-deficient versus rescued neurons to connect the molecular EMC defect to the NEDDFAS phenotype.

Deep Research

Falcon

(EMC10-deep-research-falcon.md)

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πŸ“š Additional Documentation

Notes

(EMC10-notes.md)

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Pn Notes

(EMC10-pn-notes.md)

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πŸ“„ View Raw YAML

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