EMC10 (ER membrane protein complex subunit 10; also C19orf63, INM02) is a 262 aa single-pass type I ER membrane glycoprotein with a cleavable N-terminal signal peptide, a large lumenal domain (N-glycosylated at Asn-182), a single transmembrane helix, and a short cytoplasmic tail. It is a constitutive lumenal/peripheral subunit of the ER membrane protein complex (EMC), a conserved transmembrane-domain insertase and membrane-protein chaperone that mediates energy-independent insertion of newly synthesized membrane proteins into the ER membrane, including post-translational insertion of tail-anchored proteins and cotranslational insertion and topogenesis of multipass membrane proteins such as G protein-coupled receptors. The membrane insertase activity resides in the EMC3/EMC6 membrane core; EMC10 is a non-catalytic structural subunit whose bulk projects into the ER lumen. An alternatively spliced isoform is secreted (HSS1) and circulates; secreted EMC10 has been characterized as a bone marrow-derived angiogenic growth factor that stimulates endothelial cell migration and outgrowth and promotes tissue repair after myocardial infarction. Biallelic loss-of-function variants in EMC10 cause a neurodevelopmental disorder with dysmorphic facies and variable seizures. EMC10 is broadly expressed, with the membrane form localizing to the ER membrane.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0072546 EMC complex | IBA GO_REF:0000033 | ACCEPT | Summary: EMC10 is a constitutive subunit of the ER membrane protein complex; phylogenetic assignment is consistent with direct experimental and structural evidence. Core structural identity. Reason: EMC complex membership is the core cellular-component identity of EMC10; supported by IDA, cryo-EM, and the conserved EMC10 family. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Component of the ER membrane protein complex (EMC). |
| GO:0005576 extracellular region | IEA GO_REF:0000044 | KEEP AS NON CORE | Summary: Electronic transfer of the secreted (extracellular) localization from UniProt, reflecting the secreted isoform 2 (HSS1). Genuine but peripheral to the core EMC ER membrane role. Reason: Real secreted-isoform localization but peripheral to the core EMC insertase function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 2]: Secreted |
| GO:0005789 endoplasmic reticulum membrane | IEA GO_REF:0000044 | ACCEPT | Summary: Electronic transfer of the ER membrane subcellular location of the membrane isoform from UniProt; the correct and core compartment for EMC10. Reason: Correct core location; redundant with experimental IDA evidence. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 1]: Endoplasmic reticulum membrane |
| GO:0005789 endoplasmic reticulum membrane | NAS PMID:29242231 The ER membrane protein complex is a transmembrane domain in... | ACCEPT | Summary: NAS annotation of ER membrane localization for the EMC, consistent with experimental evidence and the core compartment of EMC10. Reason: Correct core location; consistent with EXP/IDA evidence. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 1]: Endoplasmic reticulum membrane |
| GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence | IDA PMID:29242231 The ER membrane protein complex is a transmembrane domain in... | KEEP AS NON CORE | Summary: The EMC inserts transmembrane domains including stop-transfer membrane-anchor sequences; EMC10 participates as a structural subunit. A genuine EMC whole-complex process. Reason: Correct EMC process but complex-level; EMC10 is a lumenal/structural subunit contributing via membership rather than catalysis. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt stop-transfer membrane-anchor sequences become ER membrane spanning |
| GO:0071816 tail-anchored membrane protein insertion into ER membrane | IDA PMID:29242231 The ER membrane protein complex is a transmembrane domain in... | KEEP AS NON CORE | Summary: The EMC mediates post-translational insertion of tail-anchored proteins; EMC10 participates as a structural subunit. A genuine EMC whole-complex process. Reason: Correct EMC process but complex-level; EMC10's contribution is via membership. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt post-translational insertion of tail- |
| GO:0072546 EMC complex | IPI PMID:32439656 Structural basis for membrane insertion by the human ER memb... | ACCEPT | Summary: ComplexPortal/structural IPI assignment of EMC complex membership based on the cryo-EM structure of the human EMC. Core structural identity. Reason: Structurally demonstrated core EMC membership. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Component of the ER membrane protein complex (EMC). |
| GO:0005576 extracellular region | EXP PMID:19570817 Molecular cloning of a novel secreted peptide, INM02, and re... | KEEP AS NON CORE | Summary: INM02 (EMC10) is detectable in human serum; experimental secreted-form localization. Peripheral to the EMC's core ER membrane role. Reason: Real secreted-form observation but peripheral to the core EMC insertase function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Present in serum |
| GO:0005576 extracellular region | EXP Q5UCC4-2 PMID:20680400 hHSS1: a novel secreted factor and suppressor of glioma grow... | KEEP AS NON CORE | Summary: The alternatively spliced isoform 2 (HSS1) is secreted; experimental evidence of a secreted form. Genuine but isoform-specific and peripheral to the EMC's core ER membrane role. Reason: Real secreted isoform but peripheral to the core EMC insertase function and specific to isoform 2. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 2]: Secreted |
| GO:0005576 extracellular region | EXP PMID:28931551 EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni... | KEEP AS NON CORE | Summary: Secreted EMC10 acts as an extracellular angiogenic growth factor after myocardial infarction. Genuine secreted localization, peripheral to the core EMC role. Reason: Real secreted-form observation but peripheral to the core EMC insertase function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 2]: Secreted |
| GO:0032977 membrane insertase activity | IMP PMID:29809151 The ER membrane protein complex interacts cotranslationally ... | KEEP AS NON CORE | Summary: IMP evidence that EMC subunit depletion impairs membrane insertion; EMC10 contributes to the complex-level insertase activity but is not the catalytic subunit (the EMC3/EMC6 core is catalytic). Reason: contributes_to is appropriate at complex level; not EMC10's standalone enzymatic core MF, as it is a lumenal/structural subunit. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt energy-independent insertion into endoplasmic |
| GO:0032977 membrane insertase activity | IMP PMID:30415835 EMC Is Required to Initiate Accurate Membrane Protein Topoge... | KEEP AS NON CORE | Summary: IMP evidence (topogenesis study) supporting the EMC's membrane insertase activity, to which EMC10 contributes as a structural subunit. Reason: contributes_to is appropriate at complex level; not EMC10's standalone enzymatic core MF. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt energy-independent insertion into endoplasmic |
| GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence | IMP PMID:29809151 The ER membrane protein complex interacts cotranslationally ... | KEEP AS NON CORE | Summary: The EMC is required for cotranslational insertion of multipass proteins in which stop-transfer membrane-anchor sequences become membrane-spanning helices; EMC10 participates as a subunit. Reason: Correct EMC process but complex-level; EMC10's contribution is via membership. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt stop-transfer membrane-anchor sequences become ER membrane spanning |
| GO:0005789 endoplasmic reticulum membrane | IDA PMID:32439656 Structural basis for membrane insertion by the human ER memb... | ACCEPT | Summary: Direct (structural) evidence placing EMC10 in the ER membrane. Core compartment. Reason: Experimentally supported core location. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 1]: Endoplasmic reticulum membrane |
| GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence | IMP PMID:30415835 EMC Is Required to Initiate Accurate Membrane Protein Topoge... | KEEP AS NON CORE | Summary: IMP (topogenesis study) supporting the EMC's role in insertion of stop-transfer membrane-anchor sequences; EMC10 participates as a subunit. Reason: Correct EMC process but complex-level; EMC10's contribution is via membership. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt stop-transfer membrane-anchor sequences become ER membrane spanning |
| GO:0001938 positive regulation of endothelial cell proliferation | IDA PMID:28931551 EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni... | KEEP AS NON CORE | Summary: Secreted EMC10 promotes endothelial cell outgrowth/proliferation in angiogenic assays. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role. Reason: Real secreted-form activity but peripheral to the core EMC function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Stimulates cardiac endothelial cell migration and outgrowth |
| GO:0010595 positive regulation of endothelial cell migration | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: Secreted EMC10 stimulates cardiac endothelial cell migration via p38 MAPK/PAK/MK2 signaling. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role. Reason: Real secreted-form activity but peripheral to the core EMC function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Stimulates cardiac endothelial cell migration and outgrowth |
| GO:0045766 positive regulation of angiogenesis | IMP PMID:28931551 EMC10 (Endoplasmic Reticulum Membrane Protein Complex Subuni... | KEEP AS NON CORE | Summary: Loss/gain-of-function evidence that secreted EMC10 promotes angiogenesis and tissue repair after myocardial infarction. A genuine secreted-form moonlighting function, peripheral to the EMC insertase role. Reason: Experimentally supported but pertains to the secreted form and is peripheral to the core EMC function. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Promotes angiogenesis and tissue repair in the heart |
| GO:0016020 membrane | IDA PMID:22119785 Defining human ERAD networks through an integrative mapping ... | KEEP AS NON CORE | Summary: Direct generic membrane localization from the EMC-discovery study; a parent of the specific ER membrane term. Reason: Correct but generic; the ER membrane term captures the informative localization. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt [Isoform 1]: Endoplasmic reticulum membrane |
| GO:0072546 EMC complex | IDA PMID:22119785 Defining human ERAD networks through an integrative mapping ... | ACCEPT | Summary: Direct experimental identification of EMC10 in the EMC by the foundational ERAD-network mapping study. Core structural identity. Reason: Core EMC membership; directly demonstrated. Supporting Evidence: file:human/EMC10/EMC10-uniprot.txt Component of the ER membrane protein complex (EMC). |
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Download this section (compressed HTML)Q: Is the secreted/angiogenic activity of EMC10 mechanistically independent of its EMC insertase role, and does the NEDDFAS neurodevelopmental phenotype arise from loss of EMC-mediated membrane protein biogenesis, loss of the secreted factor, or both?
Q: What is the structural contribution of EMC10's lumenal domain to EMC stability and substrate handling?
Experiment: Separate the membrane (EMC) and secreted (HSS1) functions using isoform-specific or domain-targeted knock-ins, and assess effects on EMC client biogenesis versus angiogenesis/endothelial signaling.
Experiment: Define the EMC10-dependent client repertoire by quantitative membrane proteomics in EMC10-deficient versus rescued neurons to connect the molecular EMC defect to the NEDDFAS phenotype.
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