GLS

UniProt ID: O94925
Organism: Homo sapiens
Review Status: INITIALIZED
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Gene Description

GLS (kidney-type glutaminase, also known as GLS1) is a mitochondrial, phosphate-activated glutaminase (EC 3.5.1.2) that catalyzes the hydrolytic deamidation of L-glutamine to L-glutamate plus ammonia, the first and committed step of glutaminolysis. The gene produces two catalytically active splice isoforms, KGA (isoform 1) and the shorter GAC/glutaminase C (isoform 3), and a catalytically inactive muscle isoform GAM (isoform 2). The enzyme is synthesized as a ~74-kDa cytosolic precursor that is imported into mitochondria and processed by the mitochondrial-processing peptidase into mature 68- and 65-kDa chains that reside in the mitochondrial matrix. It assembles into homotetramers (dimers of dimers), and phosphate-driven tetramerization is coupled to catalytic activation; C-terminal ankyrin repeats modulate higher-order assembly. The glutamate produced feeds the TCA cycle (via glutamate dehydrogenase and transaminases to alpha-ketoglutarate) for energy and anaplerosis. GLS is central to renal ammoniagenesis and acid-base homeostasis, to the brain glutamate/glutamine cycle that supplies neurotransmitter glutamate, and to the elevated glutamine metabolism of many proliferating cancers, where it is an actively pursued drug target (allosteric inhibitors such as BPTES and CB-839/telaglenastat). Loss-of-function GLS variants cause severe neonatal developmental and epileptic encephalopathy and a global developmental delay/ataxia syndrome, whereas a gain-of-function variant causes cataract with glutamate excess and profound developmental delay.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004359 glutaminase activity
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetically-inferred glutaminase activity. This is the well-established core molecular function of GLS, confirmed directly by multiple experimental structural-enzymology studies and by the UniProt catalytic-activity annotation (EC 3.5.1.2, L-glutamine + H2O = L-glutamate + NH4+).
Supporting Evidence:
file:human/GLS/GLS-uniprot.txt
Reaction=L-glutamine + H2O = L-glutamate + NH4(+);
GO:0005739 mitochondrion
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetic inference that GLS is active in the mitochondrion. Correct: the mature enzyme is a mitochondrial (matrix) protein. Accepted as a core location.
Supporting Evidence:
PMID:22228304
GAC is distinctly mitochondrial
GO:0006543 L-glutamine catabolic process
IBA
GO_REF:0000033
ACCEPT
Summary: Phylogenetically-inferred involvement in glutamine catabolism. This is the core biological process for GLS (glutaminolysis begins with glutamine hydrolysis). Accepted; also supported directly by IDA (PMID:22049910).
GO:0004359 glutaminase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Electronic assertion of glutaminase activity (multiple IEA methods, incl. RHEA/EC/InterPro). Correct and redundant with the experimental annotations of the same term. Accepted as core MF.
GO:0005739 mitochondrion
IEA
GO_REF:0000044
ACCEPT
Summary: UniProt SubCell mapping to mitochondrion. Correct core location; redundant with experimental mitochondrial annotations.
GO:0005759 mitochondrial matrix
IEA
GO_REF:0000120
ACCEPT
Summary: Electronic assertion of mitochondrial matrix localization. Consistent with the mature 68-/65-kDa chains being matrix proteins per UniProt. This is the specific compartment within the mitochondrion; accepted.
Supporting Evidence:
file:human/GLS/GLS-uniprot.txt
Mitochondrion matrix {ECO:0000250|UniProtKB:P13264}.
GO:0005829 cytosol
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: UniProt SubCell mapping to cytosol. This reflects the ~74-kDa cytosolic precursor of isoform 1 before mitochondrial import, not a steady-state site of catalysis. Real but transient/non-core; keep as non-core.
Supporting Evidence:
file:human/GLS/GLS-uniprot.txt
Cytoplasm, cytosol
GO:0006520 amino acid metabolic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA electronic annotation to the very general parent 'amino acid metabolic process'. Not wrong, but far less informative than the specific L-glutamine catabolic / L-glutamate biosynthetic terms that are directly supported. Keep as a non-core general grouping term.
GO:0006541 L-glutamine metabolic process
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: InterPro2GO electronic annotation to 'L-glutamine metabolic process', the parent of the specific catabolic term. Correct but general; the specific child GO:0006543 (L-glutamine catabolic process) is the appropriate core term and is already annotated. Generalize/keep as non-core.
GO:0006543 L-glutamine catabolic process
IEA
GO_REF:0000107
ACCEPT
Summary: Ensembl-Compara electronic transfer of glutamine catabolic process. Correct core BP; redundant with IBA and IDA annotations of the same term.
GO:0051289 protein homotetramerization
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Electronic transfer of protein homotetramerization. GLS does form homotetramers (dimers of dimers), so this captures a real quaternary-structure property rather than the enzyme's pathway function. Keep as non-core.
GO:0097054 L-glutamate biosynthetic process
IEA
GO_REF:0000107
ACCEPT
Summary: Electronic transfer of L-glutamate biosynthetic process. This is the product side of the glutaminase reaction and is a legitimate core BP; redundant with the IDA (PMID:22049910) and TAS (PMID:21757002) annotations of the same term.
GO:0062133 negative regulation of L-glutamine biosynthetic process
IDA
PMID:16899818
Brain-specific BNIP-2-homology protein Caytaxin relocalises ...
MARK AS OVER ANNOTATED
Summary: Derived from the ATCAY/Caytaxin study (PMID:16899818). That paper shows that Caytaxin (ATCAY) binds and inhibits KGA and thereby lowers glutamate; it does not show that GLS itself negatively regulates glutamine biosynthesis. GLS degrades glutamine (catabolism) rather than regulating its synthesis, so this process term is a poor fit for GLS's own function. As an experimental IDA it is retained but flagged as an over-annotation.
Supporting Evidence:
PMID:16899818
It also reduced the steady-state levels of glutamate by inhibiting KGA enzyme activity.
GO:0005739 mitochondrion
IDA
GO_REF:0000052
ACCEPT
Summary: HPA immunofluorescence localization to mitochondrion. Consistent with all other evidence; accepted as core location.
GO:0004359 glutaminase activity
EXP
PMID:22538822
Structural basis for the allosteric inhibitory mechanism of ...
ACCEPT
Summary: Experimental glutaminase activity from the KGA structure/enzymology study (crystal structures with glutamate/glutamine substrate, catalytic-activity assays, active-site mutagenesis). Directly establishes the core molecular function. Accepted.
Supporting Evidence:
PMID:22538822
human kidney-type glutaminase isoform (KGA) is becoming an attractive target
GO:0004359 glutaminase activity
EXP
PMID:24451979
Structural basis for the active site inhibition mechanism of...
ACCEPT
Summary: Experimental glutaminase activity confirmed by the cKGA active-site inhibition study: glutaminase assays plus active-site mutagenesis (Ser286, Lys289, Tyr249, Tyr466) that reduce activity. Directly supports the core MF. Accepted.
Supporting Evidence:
PMID:24451979
Glutaminase controls the first step in the glutaminolysis pathway by converting glutamine (Gln) to glutamate (Glu)
GO:0004359 glutaminase activity
EXP
PMID:26988803
Design and evaluation of novel glutaminase inhibitors.
ACCEPT
Summary: Experimental glutaminase activity from the glutaminase-inhibitor design study, which assayed catalytic activity and solved KGA/GAC structures. Supports the core MF. Accepted.
GO:0004359 glutaminase activity
EXP
PMID:28526749
The origin and evolution of human glutaminases and their aty...
ACCEPT
Summary: Experimental glutaminase activity from the glutaminase evolution/structure study (full-length KGA crystal structure with catalytic-activity determination). Supports the core MF. Accepted.
GO:0004359 glutaminase activity
EXP
PMID:29317493
Characterization of the interactions of potent allosteric in...
ACCEPT
Summary: Experimental glutaminase activity from the GAC allosteric-inhibitor study, which measured enzymatic activity of recombinant GAC. Supports the core MF. Accepted.
Supporting Evidence:
PMID:29317493
glutaminase C (GAC), which catalyzes the first step in glutamine metabolism
GO:0005739 mitochondrion
ISS
GO_REF:0000024
ACCEPT
Summary: Sequence-similarity transfer of mitochondrial localization from the rat ortholog (P13264). Correct core location; redundant with experimental evidence.
GO:0005739 mitochondrion
EXP
PMID:22228304
Mitochondrial localization and structure-based phosphate act...
ACCEPT
Summary: Experimental demonstration that GAC is mitochondrial (subcellular-localization analysis). Directly supports the core mitochondrial localization. Accepted.
Supporting Evidence:
PMID:22228304
GAC is distinctly mitochondrial
GO:0005759 mitochondrial matrix
ISS
GO_REF:0000024
ACCEPT
Summary: Sequence-similarity transfer of mitochondrial matrix localization from the rat ortholog. Consistent with the mature matrix-resident chains; accepted as the specific compartment.
Supporting Evidence:
file:human/GLS/GLS-uniprot.txt
Mitochondrion matrix {ECO:0000250|UniProtKB:P13264}.
GO:0005759 mitochondrial matrix
TAS
Reactome:R-HSA-70609
ACCEPT
Summary: Reactome traceable assertion placing the glutaminase reaction in the mitochondrial matrix. Consistent with UniProt; accepted as the specific compartment of catalysis.
GO:0005739 mitochondrion
HTP
PMID:34800366
Quantitative high-confidence human mitochondrial proteome an...
ACCEPT
Summary: High-throughput mitochondrial proteomics detection of GLS. Consistent with the established mitochondrial localization; accepted (corroborating, non-core relative to the direct localization studies).
GO:0090461 intracellular glutamate homeostasis
IMP
PMID:30239721
GLS hyperactivity causes glutamate excess, infantile catarac...
ACCEPT
Summary: Supported by the gain-of-function Ser482Cys study: hyperactive GLS raises glutamate and lowers glutamine in patient cells, and inhibiting GLS reverses the phenotype, directly implicating GLS in setting intracellular glutamate levels. Accepted as a physiological process downstream of the core catalytic function.
Supporting Evidence:
PMID:30239721
increased glutamate and decreased glutamine concentrations were measured in urine and fibroblasts
GO:0005515 protein binding
IPI
PMID:16899818
Brain-specific BNIP-2-homology protein Caytaxin relocalises ...
MARK AS OVER ANNOTATED
Summary: IPI capturing the direct interaction with ATCAY/Caytaxin (Q86WG3), a brain-specific regulator that relocalizes GLS and inhibits its activity. The interaction is real and biologically meaningful, but bare 'protein binding' is uninformative as a molecular function. Retained as evidence of the ATCAY interaction but flagged as over-annotation; the regulatory biology is captured in the notes.
Supporting Evidence:
PMID:16899818
binding studies showed that they interact with each other directly
GO:0005739 mitochondrion
IDA
PMID:16899818
Brain-specific BNIP-2-homology protein Caytaxin relocalises ...
ACCEPT
Summary: Direct localization of KGA to mitochondria (baseline, before ATCAY-induced relocalization to neurite terminals). Supports the core mitochondrial location. Accepted.
Supporting Evidence:
PMID:16899818
relocalised KGA from the mitochondria to neurite terminals
GO:0004359 glutaminase activity
IDA
PMID:22049910
Full-length human glutaminase in complex with an allosteric ...
ACCEPT
Summary: Direct assay of glutaminase activity on full-length human GLS/GAC (kinetics; KM for glutamine reported in UniProt). Definitive support for the core molecular function. Accepted.
Supporting Evidence:
PMID:22049910
Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and ammonia.
GO:0006543 L-glutamine catabolic process
IDA
PMID:22049910
Full-length human glutaminase in complex with an allosteric ...
ACCEPT
Summary: Direct evidence that GLS catalyzes the committed catabolic step for glutamine (glutamine -> glutamate + ammonia). Core biological process. Accepted.
Supporting Evidence:
PMID:22049910
Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and ammonia.
GO:0051289 protein homotetramerization
IDA
PMID:22049910
Full-length human glutaminase in complex with an allosteric ...
KEEP AS NON CORE
Summary: Direct structural evidence for the GAC homotetramer (full-length crystal structure; BPTES binds at the tetramer interface). This is a genuine quaternary-structure property that underlies phosphate activation, but it is not the enzyme's core pathway function. Keep as non-core.
Supporting Evidence:
PMID:22049910
Two BPTES molecules bind at an interface region of the GAC tetramer
GO:0097054 L-glutamate biosynthetic process
IDA
PMID:22049910
Full-length human glutaminase in complex with an allosteric ...
ACCEPT
Summary: Direct evidence that GLS produces L-glutamate from glutamine. This is the product side of the glutaminase reaction and is a legitimate core BP (glutamate biosynthesis via glutamine hydrolysis). Accepted.
Supporting Evidence:
PMID:22049910
Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and ammonia.
GO:0097054 L-glutamate biosynthetic process
TAS
PMID:21757002
The nuclear receptor FXR regulates hepatic transport and met...
ACCEPT
Summary: Traceable assertion (FXR/hepatic glutamine-glutamate metabolism review context) that glutaminase generates glutamate. Consistent with the core function; the cited paper is about FXR regulation of hepatic glutamine/glutamate metabolism and only contextually establishes GLS's role. Accepted as corroborating (non-core relative to the direct enzymology).
GO:0004359 glutaminase activity
NAS
PMID:10719215
Isolation, characterization and expression of a human brain ...
ACCEPT
Summary: Non-traceable/author-stated glutaminase activity from the human brain glutaminase cDNA cloning paper (recombinant enzyme was active). Correct core MF; redundant with the experimental annotations.
Supporting Evidence:
PMID:10719215
express high levels of properly processed and active glutaminase
GO:0005739 mitochondrion
NAS
PMID:10719215
Isolation, characterization and expression of a human brain ...
ACCEPT
Summary: Author-stated mitochondrial localization inferred from the N-terminal mitochondrial targeting signal in the human brain glutaminase cDNA. Correct core location; redundant with direct evidence.
Supporting Evidence:
PMID:10719215
N-terminal mitochondrial targeting signal
GO:0006543 L-glutamine catabolic process
NAS
PMID:10719215
Isolation, characterization and expression of a human brain ...
ACCEPT
Summary: Author-stated involvement in glutamine metabolism (the cloned enzyme catalyzes a key reaction in glutamine metabolism and neurotransmitter synthesis). Core BP; redundant with the IBA/IDA annotations.
Supporting Evidence:
PMID:10719215
a key reaction in the metabolism of glutamine and the synthesis of important excitatory and inhibitory neurotransmitters
GO:0004359 glutaminase activity
NAS
PMID:11015561
Cloning and analysis of unique human glutaminase isoforms ge...
ACCEPT
Summary: Author-stated glutaminase activity from the isoform-cloning paper (hKGA/hGAC are active kidney-type glutaminases; hGAC has high glutaminase activity in breast cancer cells). Correct core MF; redundant with experimental annotations.
Supporting Evidence:
PMID:11015561
a high rate of glutamine utilization and glutaminase activity

Core Functions

Hydrolyzes L-glutamine to L-glutamate and ammonia in the mitochondrial matrix (glutaminase activity, EC 3.5.1.2), the first, committed step of glutaminolysis that supplies glutamate for TCA-cycle anaplerosis, renal ammoniagenesis, and the neuronal glutamate/glutamine cycle.

Supporting Evidence:
  • file:human/GLS/GLS-uniprot.txt
    Reaction=L-glutamine + H2O = L-glutamate + NH4(+);
  • PMID:22049910
    Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and ammonia.
  • PMID:24451979
    Glutaminase controls the first step in the glutaminolysis pathway by converting glutamine (Gln) to glutamate (Glu)

References

Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Isolation, characterization and expression of a human brain mitochondrial glutaminase cDNA.
Cloning and analysis of unique human glutaminase isoforms generated by tissue-specific alternative splicing.
Brain-specific BNIP-2-homology protein Caytaxin relocalises glutaminase to neurite terminals and reduces glutamate levels.
The nuclear receptor FXR regulates hepatic transport and metabolism of glutamine and glutamate.
Full-length human glutaminase in complex with an allosteric inhibitor.
Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.
Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Structural basis for the active site inhibition mechanism of human kidney-type glutaminase (KGA).
Design and evaluation of novel glutaminase inhibitors.
The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats.
Characterization of the interactions of potent allosteric inhibitors with glutaminase C, a key enzyme in cancer cell glutamine metabolism.
GLS hyperactivity causes glutamate excess, infantile cataract and profound developmental delay.
Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.
Reactome:R-HSA-70609
glutamine + H2O => glutamate + NH4+ (GLS)

📚 Additional Documentation

Notes

(GLS-notes.md)

GLS (human) — review notes

UniProt: O94925 (GLSK_HUMAN), "Glutaminase kidney isoform, mitochondrial"; gene GLS (syn. GLS1, KIAA0838); 669 aa precursor. HGNC:4331. EC 3.5.1.2.

Identity and core biochemistry

GLS is the kidney-type / phosphate-activated glutaminase. Two catalytically active isoforms exist by alternative splicing: KGA (isoform 1, O94925-1) and GAC / Glutaminase C (isoform 3, O94925-3); a third splice product GAM (isoform 2, O94925-2) lacks catalytic activity.
- Catalytic reaction (UniProt CATALYTIC ACTIVITY): [file:human/GLS/GLS-uniprot.txt "Reaction=L-glutamine + H2O = L-glutamate + NH4(+)"]; EC=3.5.1.2; Rhea:RHEA:15889.
- FUNCTION (UniProt): [file:human/GLS/GLS-uniprot.txt "Catalyzes the first reaction in the primary pathway for the"] renal catabolism of glutamine; plays a role in maintaining acid-base homeostasis; regulates the levels of the neurotransmitter glutamate.
- Isoform 2 (GAM): [file:human/GLS/GLS-uniprot.txt "Lacks catalytic activity."]
- PMID:22049910
- PMID:24451979 — feeds glutamate into the TCA cycle (glutaminolysis/anaplerosis).
- PMID:11015561 and the catalytically inactive hGAM is muscle-specific.

Subcellular location

Mitochondrion; the mature enzyme is generated from a ~74-kDa cytosolic precursor imported and processed by the mitochondrial-processing peptidase (MPP) to 68-/65-kDa matrix chains.
- [file:human/GLS/GLS-uniprot.txt "The 74-kDa cytosolic precursor is"] translocated into the mitochondria and processed... to yield the mature 68- and 65-kDa subunits.
- Matrix chains: [file:human/GLS/GLS-uniprot.txt "Mitochondrion matrix {ECO:0000250|UniProtKB:P13264}."]
- GAC is distinctly mitochondrial: PMID:22228304.
- Brain GA cDNA encodes a protein with an N-terminal mitochondrial targeting signal: PMID:10719215.
- KGA can be relocalised from mitochondria to neurite terminals by ATCAY/Caytaxin: PMID:16899818.
- The cytosol annotation (GO:0005829, IEA UniProtKB-SubCell) reflects the cytosolic precursor stage of isoform 1 before mitochondrial import ([file:human/GLS/GLS-uniprot.txt "Cytoplasm, cytosol"]); it is a real but non-core, transient localization.

Quaternary structure / regulation

  • Homotetramer, dimer of dimers (UniProt SUBUNIT, citing PubMed:22538822, 26988803, 28526749, 29317493). Tetramerization is coupled to activation.
  • Phosphate-activated; BPTES/CB-839-class allosteric inhibitors bind at the dimer interface and lock a nonproductive tetramer.
  • PMID:22049910
  • Phosphate activation / tetramerization: [PMID:22228304 "the \ntetramerization-induced lifting of a \"gating loop\" as essential for the \nphosphate-dependent activation process"].
  • Active-site catalytic residues (KGA numbering): catalytic nucleophile Ser286, Lys289 general base, Tyr466; substrate/active-site residues Tyr249, Asn335, Glu381, Asn388, Tyr414, Val484 (PMID:24451979). DON covalently modifies Ser286.
  • KGA activity is stimulated by EGF/Raf-Mek-Erk phosphorylation and the enzyme associates with RAF1/MAP2K2 (PMID:22538822); interacts with ATCAY (Caytaxin), which relocalises it and reduces its activity (PMID:16899818).
  • C-terminal ANK repeats: PMID:28526749 — glutaminase ANK repeats fold via intramolecular contacts that occlude the usual ANK protein-protein-interaction surface and limit assembly into supra-tetrameric filaments.

Biological roles

  • Glutaminolysis / anaplerosis: first, committed step feeding glutamate to TCA (via GLUD1/transaminases -> alpha-ketoglutarate). Central to cancer "glutamine addiction"; drug target (CB-839/telaglenastat, BPTES).
  • PMID:29317493
  • Renal ammoniagenesis / acid-base homeostasis (UniProt FUNCTION).
  • Brain glutamate-glutamine cycle: supplies neurotransmitter glutamate.
  • PMID:16899818
  • Intracellular glutamate homeostasis: gain-of-function Ser482Cys causes hyperactivity, increased glutamate/decreased glutamine.
  • PMID:30239721; "we describe an inborn error of glutamate metabolism caused by a GLS hyperactivity variant".

Disease

  • DEE71 (developmental & epileptic encephalopathy 71; MIM 618328): autosomal recessive, loss-of-function (UniProt DISEASE; PubMed:30575854).
  • CASGID (cataract, subcutaneous nodules, glutamate excess, developmental delay; MIM 618339): autosomal dominant, gain-of-function Ser482Cys (PMID:30239721).
  • GDPAG (global developmental delay, progressive ataxia, elevated glutamine; MIM 618412): autosomal recessive, GAG/short-tandem-repeat expansion loss-of-function (UniProt DISEASE; PubMed:30970188).

Annotation review judgments (summary)

  • Core MF: glutaminase activity (GO:0004359) — strongly supported by multiple EXP/IDA structural-enzymology papers and UniProt catalytic activity. ACCEPT.
  • Core BP: L-glutamine catabolic process (GO:0006543) and L-glutamate biosynthetic process (GO:0097054) — the two faces of the same reaction; both directly supported (IDA PMID:22049910). ACCEPT.
  • Location: mitochondrion (GO:0005739) core; mitochondrial matrix (GO:0005759) the specific matrix location of the mature chains. ACCEPT.
  • protein homotetramerization (GO:0051289) — real quaternary-structure property (dimer of dimers); KEEP_AS_NON_CORE (structural, not the pathway function).
  • intracellular glutamate homeostasis (GO:0090461) IMP PMID:30239721 — supported by the gain-of-function disease study; ACCEPT (organism-level consequence of the MF).
  • negative regulation of L-glutamine biosynthetic process (GO:0062133) IDA PMID:16899818 — the paper shows ATCAY/Caytaxin inhibits KGA and reduces glutamate; it is not evidence that GLS negatively regulates glutamine biosynthesis. This BP term is a poor fit for GLS's own activity (glutamine catabolism, not regulation of glutamine synthesis). MARK_AS_OVER_ANNOTATED (experimental IDA — do not REMOVE).
  • protein binding (GO:0005515) IPI PMID:16899818 with ATCAY (Q86WG3) — bare protein binding; keep as evidence of the direct ATCAY interaction but MARK_AS_OVER_ANNOTATED (uninformative MF); the biology is captured in notes/core.
  • IEA/IBA/ISS/NAS/TAS/HTP duplicates of the above accepted terms: ACCEPT or KEEP_AS_NON_CORE per redundancy.
  • amino acid metabolic process (GO:0006520) IEA (ARBA) and L-glutamine metabolic process (GO:0006541) IEA (InterPro) — correct but general parents of the specific catabolic term; KEEP_AS_NON_CORE / MODIFY toward the specific GO:0006543.

📄 View Raw YAML

id: O94925
gene_symbol: GLS
product_type: PROTEIN
status: INITIALIZED
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: >-
  GLS (kidney-type glutaminase, also known as GLS1) is a mitochondrial,
  phosphate-activated glutaminase (EC 3.5.1.2) that catalyzes the hydrolytic
  deamidation of L-glutamine to L-glutamate plus ammonia, the first and
  committed step of glutaminolysis. The gene produces two catalytically active
  splice isoforms, KGA (isoform 1) and the shorter GAC/glutaminase C (isoform 3),
  and a catalytically inactive muscle isoform GAM (isoform 2). The enzyme is
  synthesized as a ~74-kDa cytosolic precursor that is imported into mitochondria
  and processed by the mitochondrial-processing peptidase into mature 68- and
  65-kDa chains that reside in the mitochondrial matrix. It assembles into
  homotetramers (dimers of dimers), and phosphate-driven tetramerization is
  coupled to catalytic activation; C-terminal ankyrin repeats modulate higher-order
  assembly. The glutamate produced feeds the TCA cycle (via glutamate
  dehydrogenase and transaminases to alpha-ketoglutarate) for energy and
  anaplerosis. GLS is central to renal ammoniagenesis and acid-base homeostasis,
  to the brain glutamate/glutamine cycle that supplies neurotransmitter glutamate,
  and to the elevated glutamine metabolism of many proliferating cancers, where it
  is an actively pursued drug target (allosteric inhibitors such as BPTES and
  CB-839/telaglenastat). Loss-of-function GLS variants cause severe neonatal
  developmental and epileptic encephalopathy and a global developmental
  delay/ataxia syndrome, whereas a gain-of-function variant causes cataract with
  glutamate excess and profound developmental delay.
alternative_products:
- name: 1 (KGA {ECO:0000303|PubMed:22228304,)
  id: O94925-1
- name: 2 (GAM)
  id: O94925-2
  sequence_note: VSP_001765, VSP_001766
- name: 3 (Glutaminase C {ECO:0000303|PubMed:22228304}, GAC)
  id: O94925-3
  sequence_note: VSP_001767
existing_annotations:
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    summary: >-
      Phylogenetically-inferred glutaminase activity. This is the well-established
      core molecular function of GLS, confirmed directly by multiple experimental
      structural-enzymology studies and by the UniProt catalytic-activity annotation
      (EC 3.5.1.2, L-glutamine + H2O = L-glutamate + NH4+).
    action: ACCEPT
    supported_by:
    - reference_id: file:human/GLS/GLS-uniprot.txt
      supporting_text: "Reaction=L-glutamine + H2O = L-glutamate + NH4(+);"
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: >-
      Phylogenetic inference that GLS is active in the mitochondrion. Correct: the
      mature enzyme is a mitochondrial (matrix) protein. Accepted as a core location.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22228304
      supporting_text: "GAC is distinctly mitochondrial"
- term:
    id: GO:0006543
    label: L-glutamine catabolic process
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: >-
      Phylogenetically-inferred involvement in glutamine catabolism. This is the
      core biological process for GLS (glutaminolysis begins with glutamine
      hydrolysis). Accepted; also supported directly by IDA (PMID:22049910).
    action: ACCEPT
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  qualifier: enables
  review:
    summary: >-
      Electronic assertion of glutaminase activity (multiple IEA methods, incl.
      RHEA/EC/InterPro). Correct and redundant with the experimental annotations of
      the same term. Accepted as core MF.
    action: ACCEPT
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: >-
      UniProt SubCell mapping to mitochondrion. Correct core location; redundant with
      experimental mitochondrial annotations.
    action: ACCEPT
- term:
    id: GO:0005759
    label: mitochondrial matrix
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  qualifier: located_in
  review:
    summary: >-
      Electronic assertion of mitochondrial matrix localization. Consistent with the
      mature 68-/65-kDa chains being matrix proteins per UniProt. This is the specific
      compartment within the mitochondrion; accepted.
    action: ACCEPT
    supported_by:
    - reference_id: file:human/GLS/GLS-uniprot.txt
      supporting_text: "Mitochondrion matrix {ECO:0000250|UniProtKB:P13264}."
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: >-
      UniProt SubCell mapping to cytosol. This reflects the ~74-kDa cytosolic
      precursor of isoform 1 before mitochondrial import, not a steady-state site of
      catalysis. Real but transient/non-core; keep as non-core.
    action: KEEP_AS_NON_CORE
    supported_by:
    - reference_id: file:human/GLS/GLS-uniprot.txt
      supporting_text: "Cytoplasm, cytosol"
- term:
    id: GO:0006520
    label: amino acid metabolic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: involved_in
  review:
    summary: >-
      ARBA electronic annotation to the very general parent 'amino acid metabolic
      process'. Not wrong, but far less informative than the specific L-glutamine
      catabolic / L-glutamate biosynthetic terms that are directly supported. Keep as
      a non-core general grouping term.
    action: KEEP_AS_NON_CORE
- term:
    id: GO:0006541
    label: L-glutamine metabolic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  qualifier: involved_in
  review:
    summary: >-
      InterPro2GO electronic annotation to 'L-glutamine metabolic process', the parent
      of the specific catabolic term. Correct but general; the specific child
      GO:0006543 (L-glutamine catabolic process) is the appropriate core term and is
      already annotated. Generalize/keep as non-core.
    action: KEEP_AS_NON_CORE
- term:
    id: GO:0006543
    label: L-glutamine catabolic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: >-
      Ensembl-Compara electronic transfer of glutamine catabolic process. Correct core
      BP; redundant with IBA and IDA annotations of the same term.
    action: ACCEPT
- term:
    id: GO:0051289
    label: protein homotetramerization
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: >-
      Electronic transfer of protein homotetramerization. GLS does form homotetramers
      (dimers of dimers), so this captures a real quaternary-structure property rather
      than the enzyme's pathway function. Keep as non-core.
    action: KEEP_AS_NON_CORE
- term:
    id: GO:0097054
    label: L-glutamate biosynthetic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000107
  qualifier: involved_in
  review:
    summary: >-
      Electronic transfer of L-glutamate biosynthetic process. This is the product
      side of the glutaminase reaction and is a legitimate core BP; redundant with the
      IDA (PMID:22049910) and TAS (PMID:21757002) annotations of the same term.
    action: ACCEPT
- term:
    id: GO:0062133
    label: negative regulation of L-glutamine biosynthetic process
  evidence_type: IDA
  original_reference_id: PMID:16899818
  qualifier: involved_in
  review:
    summary: >-
      Derived from the ATCAY/Caytaxin study (PMID:16899818). That paper shows that
      Caytaxin (ATCAY) binds and inhibits KGA and thereby lowers glutamate; it does
      not show that GLS itself negatively regulates glutamine biosynthesis. GLS
      degrades glutamine (catabolism) rather than regulating its synthesis, so this
      process term is a poor fit for GLS's own function. As an experimental IDA it is
      retained but flagged as an over-annotation.
    action: MARK_AS_OVER_ANNOTATED
    supported_by:
    - reference_id: PMID:16899818
      supporting_text: "It also reduced the steady-state \nlevels of glutamate by inhibiting KGA enzyme activity."
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: >-
      HPA immunofluorescence localization to mitochondrion. Consistent with all other
      evidence; accepted as core location.
    action: ACCEPT
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: EXP
  original_reference_id: PMID:22538822
  qualifier: enables
  review:
    summary: >-
      Experimental glutaminase activity from the KGA structure/enzymology study
      (crystal structures with glutamate/glutamine substrate, catalytic-activity
      assays, active-site mutagenesis). Directly establishes the core molecular
      function. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22538822
      supporting_text: "human kidney-type glutaminase isoform (KGA) is becoming an \nattractive target"
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: EXP
  original_reference_id: PMID:24451979
  qualifier: enables
  review:
    summary: >-
      Experimental glutaminase activity confirmed by the cKGA active-site inhibition
      study: glutaminase assays plus active-site mutagenesis (Ser286, Lys289, Tyr249,
      Tyr466) that reduce activity. Directly supports the core MF. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:24451979
      supporting_text: "Glutaminase controls the first step in the glutaminolysis pathway by converting glutamine (Gln) to glutamate (Glu)"
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: EXP
  original_reference_id: PMID:26988803
  qualifier: enables
  review:
    summary: >-
      Experimental glutaminase activity from the glutaminase-inhibitor design study,
      which assayed catalytic activity and solved KGA/GAC structures. Supports the
      core MF. Accepted.
    action: ACCEPT
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: EXP
  original_reference_id: PMID:28526749
  qualifier: enables
  review:
    summary: >-
      Experimental glutaminase activity from the glutaminase evolution/structure study
      (full-length KGA crystal structure with catalytic-activity determination).
      Supports the core MF. Accepted.
    action: ACCEPT
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: EXP
  original_reference_id: PMID:29317493
  qualifier: enables
  review:
    summary: >-
      Experimental glutaminase activity from the GAC allosteric-inhibitor study, which
      measured enzymatic activity of recombinant GAC. Supports the core MF. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:29317493
      supporting_text: "glutaminase C \n(GAC), which catalyzes the first step in glutamine metabolism"
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: >-
      Sequence-similarity transfer of mitochondrial localization from the rat ortholog
      (P13264). Correct core location; redundant with experimental evidence.
    action: ACCEPT
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: EXP
  original_reference_id: PMID:22228304
  qualifier: located_in
  review:
    summary: >-
      Experimental demonstration that GAC is mitochondrial (subcellular-localization
      analysis). Directly supports the core mitochondrial localization. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22228304
      supporting_text: "GAC is distinctly mitochondrial"
- term:
    id: GO:0005759
    label: mitochondrial matrix
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: >-
      Sequence-similarity transfer of mitochondrial matrix localization from the rat
      ortholog. Consistent with the mature matrix-resident chains; accepted as the
      specific compartment.
    action: ACCEPT
    supported_by:
    - reference_id: file:human/GLS/GLS-uniprot.txt
      supporting_text: "Mitochondrion matrix {ECO:0000250|UniProtKB:P13264}."
- term:
    id: GO:0005759
    label: mitochondrial matrix
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-70609
  qualifier: located_in
  review:
    summary: >-
      Reactome traceable assertion placing the glutaminase reaction in the
      mitochondrial matrix. Consistent with UniProt; accepted as the specific
      compartment of catalysis.
    action: ACCEPT
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: HTP
  original_reference_id: PMID:34800366
  qualifier: located_in
  review:
    summary: >-
      High-throughput mitochondrial proteomics detection of GLS. Consistent with the
      established mitochondrial localization; accepted (corroborating, non-core relative
      to the direct localization studies).
    action: ACCEPT
- term:
    id: GO:0090461
    label: intracellular glutamate homeostasis
  evidence_type: IMP
  original_reference_id: PMID:30239721
  qualifier: involved_in
  review:
    summary: >-
      Supported by the gain-of-function Ser482Cys study: hyperactive GLS raises
      glutamate and lowers glutamine in patient cells, and inhibiting GLS reverses the
      phenotype, directly implicating GLS in setting intracellular glutamate levels.
      Accepted as a physiological process downstream of the core catalytic function.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:30239721
      supporting_text: "increased glutamate and decreased glutamine \nconcentrations were measured in urine and fibroblasts"
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16899818
  qualifier: enables
  review:
    summary: >-
      IPI capturing the direct interaction with ATCAY/Caytaxin (Q86WG3), a
      brain-specific regulator that relocalizes GLS and inhibits its activity. The
      interaction is real and biologically meaningful, but bare 'protein binding' is
      uninformative as a molecular function. Retained as evidence of the ATCAY
      interaction but flagged as over-annotation; the regulatory biology is captured in
      the notes.
    action: MARK_AS_OVER_ANNOTATED
    supported_by:
    - reference_id: PMID:16899818
      supporting_text: "binding studies showed that they interact with each other \ndirectly"
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: IDA
  original_reference_id: PMID:16899818
  qualifier: located_in
  review:
    summary: >-
      Direct localization of KGA to mitochondria (baseline, before ATCAY-induced
      relocalization to neurite terminals). Supports the core mitochondrial location.
      Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:16899818
      supporting_text: "relocalised \nKGA from the mitochondria to neurite terminals"
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: IDA
  original_reference_id: PMID:22049910
  qualifier: enables
  review:
    summary: >-
      Direct assay of glutaminase activity on full-length human GLS/GAC (kinetics; KM
      for glutamine reported in UniProt). Definitive support for the core molecular
      function. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22049910
      supporting_text: "Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and \nammonia."
- term:
    id: GO:0006543
    label: L-glutamine catabolic process
  evidence_type: IDA
  original_reference_id: PMID:22049910
  qualifier: involved_in
  review:
    summary: >-
      Direct evidence that GLS catalyzes the committed catabolic step for glutamine
      (glutamine -> glutamate + ammonia). Core biological process. Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22049910
      supporting_text: "Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and \nammonia."
- term:
    id: GO:0051289
    label: protein homotetramerization
  evidence_type: IDA
  original_reference_id: PMID:22049910
  qualifier: involved_in
  review:
    summary: >-
      Direct structural evidence for the GAC homotetramer (full-length crystal
      structure; BPTES binds at the tetramer interface). This is a genuine
      quaternary-structure property that underlies phosphate activation, but it is not
      the enzyme's core pathway function. Keep as non-core.
    action: KEEP_AS_NON_CORE
    supported_by:
    - reference_id: PMID:22049910
      supporting_text: "Two BPTES molecules bind at an interface region of the GAC \ntetramer"
- term:
    id: GO:0097054
    label: L-glutamate biosynthetic process
  evidence_type: IDA
  original_reference_id: PMID:22049910
  qualifier: involved_in
  review:
    summary: >-
      Direct evidence that GLS produces L-glutamate from glutamine. This is the product
      side of the glutaminase reaction and is a legitimate core BP (glutamate
      biosynthesis via glutamine hydrolysis). Accepted.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:22049910
      supporting_text: "Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and \nammonia."
- term:
    id: GO:0097054
    label: L-glutamate biosynthetic process
  evidence_type: TAS
  original_reference_id: PMID:21757002
  qualifier: involved_in
  review:
    summary: >-
      Traceable assertion (FXR/hepatic glutamine-glutamate metabolism review context)
      that glutaminase generates glutamate. Consistent with the core function; the
      cited paper is about FXR regulation of hepatic glutamine/glutamate metabolism and
      only contextually establishes GLS's role. Accepted as corroborating (non-core
      relative to the direct enzymology).
    action: ACCEPT
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: NAS
  original_reference_id: PMID:10719215
  qualifier: enables
  review:
    summary: >-
      Non-traceable/author-stated glutaminase activity from the human brain
      glutaminase cDNA cloning paper (recombinant enzyme was active). Correct core MF;
      redundant with the experimental annotations.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:10719215
      supporting_text: "express high levels of properly processed \nand active glutaminase"
- term:
    id: GO:0005739
    label: mitochondrion
  evidence_type: NAS
  original_reference_id: PMID:10719215
  qualifier: located_in
  review:
    summary: >-
      Author-stated mitochondrial localization inferred from the N-terminal
      mitochondrial targeting signal in the human brain glutaminase cDNA. Correct core
      location; redundant with direct evidence.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:10719215
      supporting_text: "N-terminal mitochondrial targeting signal"
- term:
    id: GO:0006543
    label: L-glutamine catabolic process
  evidence_type: NAS
  original_reference_id: PMID:10719215
  qualifier: involved_in
  review:
    summary: >-
      Author-stated involvement in glutamine metabolism (the cloned enzyme catalyzes a
      key reaction in glutamine metabolism and neurotransmitter synthesis). Core BP;
      redundant with the IBA/IDA annotations.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:10719215
      supporting_text: "a key reaction in the metabolism of glutamine and the synthesis of \nimportant excitatory and inhibitory neurotransmitters"
- term:
    id: GO:0004359
    label: glutaminase activity
  evidence_type: NAS
  original_reference_id: PMID:11015561
  qualifier: enables
  review:
    summary: >-
      Author-stated glutaminase activity from the isoform-cloning paper (hKGA/hGAC are
      active kidney-type glutaminases; hGAC has high glutaminase activity in breast
      cancer cells). Correct core MF; redundant with experimental annotations.
    action: ACCEPT
    supported_by:
    - reference_id: PMID:11015561
      supporting_text: "a high rate \nof glutamine utilization and glutaminase activity"
core_functions:
- description: >-
    Hydrolyzes L-glutamine to L-glutamate and ammonia in the mitochondrial matrix
    (glutaminase activity, EC 3.5.1.2), the first, committed step of glutaminolysis
    that supplies glutamate for TCA-cycle anaplerosis, renal ammoniagenesis, and the
    neuronal glutamate/glutamine cycle.
  molecular_function:
    id: GO:0004359
    label: glutaminase activity
  directly_involved_in:
  - id: GO:0006543
    label: L-glutamine catabolic process
  - id: GO:0097054
    label: L-glutamate biosynthetic process
  locations:
  - id: GO:0005759
    label: mitochondrial matrix
  supported_by:
  - reference_id: file:human/GLS/GLS-uniprot.txt
    supporting_text: "Reaction=L-glutamine + H2O = L-glutamate + NH4(+);"
  - reference_id: PMID:22049910
    supporting_text: "Glutaminase (GLS1/2) catalyzes the conversion of L-glutamine to L-glutamate and \nammonia."
  - reference_id: PMID:24451979
    supporting_text: "Glutaminase controls the first step in the glutaminolysis pathway by converting glutamine (Gln) to glutamate (Glu)"
references:
- id: GO_REF:0000002
  title: Gene Ontology annotation through association of InterPro records with GO
    terms
  findings: []
- id: GO_REF:0000024
  title: Manual transfer of experimentally-verified manual GO annotation data to orthologs
    by curator judgment of sequence similarity
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
    vocabulary mapping, accompanied by conservative changes to GO terms applied by
    UniProt
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: GO_REF:0000107
  title: Automatic transfer of experimentally verified manual GO annotation data to
    orthologs using Ensembl Compara
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning models
  findings: []
- id: GO_REF:0000120
  title: Combined Automated Annotation using Multiple IEA Methods
  findings: []
- id: PMID:10719215
  title: Isolation, characterization and expression of a human brain mitochondrial
    glutaminase cDNA.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Cloning of the human brain mitochondrial glutaminase cDNA; recombinant enzyme is
      active and carries an N-terminal mitochondrial targeting signal. Abstract-only in
      cache; supports glutaminase activity and mitochondrial localization.
- id: PMID:11015561
  title: Cloning and analysis of unique human glutaminase isoforms generated by tissue-specific
    alternative splicing.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Defines the human KGA, GAC and GAM splice isoforms and their tissue expression;
      GAC is the high-glutaminase-activity isoform in breast cancer cells. GAM (isoform
      2) lacks catalytic activity per UniProt.
- id: PMID:16899818
  title: Brain-specific BNIP-2-homology protein Caytaxin relocalises glutaminase to
    neurite terminals and reduces glutamate levels.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Establishes the direct ATCAY (Caytaxin, Q86WG3)-KGA interaction and shows ATCAY
      inhibits KGA activity and lowers glutamate. Supports the protein-binding IPI and
      the mitochondrial IDA; the derived GO:0062133 process term describes ATCAY's
      regulatory effect rather than a GLS function (flagged as over-annotation).
- id: PMID:21757002
  title: The nuclear receptor FXR regulates hepatic transport and metabolism of glutamine
    and glutamate.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: >-
      Primarily about FXR regulation of hepatic glutamine/glutamate metabolism; only
      contextually supports glutaminase producing glutamate. Basis for a TAS annotation
      of L-glutamate biosynthetic process.
- id: PMID:22049910
  title: Full-length human glutaminase in complex with an allosteric inhibitor.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      First full-length human GAC crystal structure with kinetic assays; directly
      supports glutaminase activity, glutamine catabolism/glutamate biosynthesis, and
      the homotetramer.
- id: PMID:22228304
  title: Mitochondrial localization and structure-based phosphate activation mechanism
    of Glutaminase C with implications for cancer metabolism.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Demonstrates GAC is mitochondrial and describes the phosphate/tetramerization
      activation mechanism relevant to cancer metabolism. Supports the mitochondrial
      localization annotation.
- id: PMID:22538822
  title: Structural basis for the allosteric inhibitory mechanism of human kidney-type
    glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      KGA crystal structures with glutamate/glutamine, catalytic-activity assays,
      active-site mutagenesis, and RAF1/MAP2K2 interaction; supports the EXP glutaminase
      activity annotation and the homotetramer/regulation biology.
- id: PMID:24451979
  title: Structural basis for the active site inhibition mechanism of human kidney-type
    glutaminase (KGA).
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Full text available; cKGA:DON structure and active-site mutagenesis (Ser286,
      Lys289, Tyr249, Tyr466) confirm catalytic residues and glutaminase activity.
- id: PMID:26988803
  title: Design and evaluation of novel glutaminase inhibitors.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Glutaminase-inhibitor design study with KGA/GAC structures and activity assays;
      supports the EXP glutaminase activity annotation.
- id: PMID:28526749
  title: The origin and evolution of human glutaminases and their atypical C-terminal
    ankyrin repeats.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Full-length KGA structure and evolutionary/ANK-repeat analysis; determines
      catalytic activity and subunit structure. Supports the EXP glutaminase activity
      annotation and the homotetramer/filament biology.
- id: PMID:29317493
  title: Characterization of the interactions of potent allosteric inhibitors with
    glutaminase C, a key enzyme in cancer cell glutamine metabolism.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      GAC allosteric-inhibitor (UPGL00004/CB-839/BPTES) structural and enzymatic
      characterization; supports the EXP glutaminase activity annotation.
- id: PMID:30239721
  title: GLS hyperactivity causes glutamate excess, infantile cataract and profound
    developmental delay.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: >-
      Gain-of-function Ser482Cys GLS variant (CASGID) causing glutamate excess;
      functional basis for the intracellular glutamate homeostasis IMP annotation.
- id: PMID:34800366
  title: Quantitative high-confidence human mitochondrial proteome and its dynamics
    in cellular context.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: >-
      High-throughput mitochondrial proteome study; corroborates GLS mitochondrial
      localization (HTP evidence).
- id: Reactome:R-HSA-70609
  title: glutamine + H2O => glutamate + NH4+ (GLS)
  findings: []