Cytosolic hypoxanthine-guanine phosphoribosyltransferase (HGPRT; EC 2.4.2.8), the central enzyme of the purine salvage pathway. It transfers the 5-phosphoribosyl group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) onto a 6-oxopurine base, converting hypoxanthine to inosine monophosphate (IMP) and guanine to guanosine monophosphate (GMP), thereby recycling free purine bases into nucleotides and sparing the energetically costly de novo purine biosynthesis pathway. The catalytic reaction requires magnesium (two Mg2+ ions per subunit, bound largely via the substrate) and the active enzyme is a homotetramer. HPRT1 is expressed broadly with highest relative activity in the basal ganglia. Complete loss of HPRT activity causes Lesch-Nyhan syndrome (hyperuricemia with severe neurological dysfunction including dystonia, choreoathetosis, intellectual disability and compulsive self-injurious behavior); partial deficiency causes HPRT-related hyperuricemia/gout (Kelley-Seegmiller syndrome).
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0004422
hypoxanthine phosphoribosyltransferase activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred core catalytic activity, converting hypoxanthine plus PRPP to IMP. This is a defining, experimentally established function of HPRT1.
Reason: This is one of the two core molecular functions of HPRT1, supported by direct experimental catalytic-activity data and structural studies, and consistent across IBA, IEA and IDA evidence. EC 2.4.2.8.
Supporting Evidence:
PMID:9521733
Hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua) and the phosphoribosyl donor 5-phosphoribosyl-1-pyrophosphate (PRPP).
|
|
GO:0046100
hypoxanthine metabolic process
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred involvement in hypoxanthine metabolism, reflecting the enzyme's use of hypoxanthine as a substrate to form IMP.
Reason: HPRT1 directly consumes hypoxanthine in the salvage reaction, so involvement in hypoxanthine metabolic process is correct, though the more specific salvage terms (hypoxanthine salvage, IMP salvage) better capture the physiological role.
Supporting Evidence:
PMID:9521733
catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua)
|
|
GO:0005829
cytosol
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred cytosolic localization, consistent with the soluble cytoplasmic nature of the salvage enzyme.
Reason: HPRT1 is a soluble cytosolic enzyme (UniProt subcellular location cytoplasm), confirmed by IDA (HPA) and multiple orthogonal lines of evidence.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0032263
GMP salvage
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred role in GMP salvage, matching the guanine to GMP reaction catalyzed by HPRT1.
Reason: The guanine phosphoribosyltransferase reaction produces GMP directly from the salvaged base guanine, so involvement in GMP salvage is a core pathway role.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
|
|
GO:0006178
guanine salvage
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred role in guanine salvage, reflecting HPRT1 recycling free guanine into GMP.
Reason: HPRT1 salvages guanine by phosphoribosylation to GMP; this is a core pathway role also supported by direct experimental evidence.
Supporting Evidence:
PMID:9521733
catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua)
|
|
GO:0032264
IMP salvage
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred role in IMP salvage, matching the hypoxanthine to IMP reaction.
Reason: The hypoxanthine phosphoribosyltransferase reaction produces IMP from the salvaged base hypoxanthine; UniProt records IMP biosynthesis via the salvage pathway as step 1/1 for this enzyme.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Purine metabolism; IMP biosynthesis via salvage pathway
|
|
GO:0000287
magnesium ion binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetically inferred magnesium binding, consistent with the Mg2+ requirement of the phosphoribosyltransfer reaction.
Reason: HPRT1 binds two Mg2+ ions per subunit which are essential for catalysis; this is directly supported by structural studies (transition-state analog complex with Mg2+-pyrophosphate) and UniProt cofactor annotation.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Note=Binds 2 magnesium ions per subunit.
PMID:10360366
Two Mg2+ ions sandwich the pyrophosphate and contact both hydroxyls of the ribosyl analog.
|
|
GO:0004422
hypoxanthine phosphoribosyltransferase activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Electronic assertion of hypoxanthine phosphoribosyltransferase activity from combined automated methods, redundant with the experimental IDA/IBA annotations.
Reason: Correct core catalytic activity; the IEA mapping (ARBA/InterPro/RHEA:17973) agrees with experimental evidence.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
EC=2.4.2.8 {ECO:0000269|PubMed:10338013, ECO:0000269|PubMed:19527031};
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Electronic assertion of cytoplasmic localization, consistent with the cytosolic nature of the enzyme.
Reason: Correct localization; cytoplasm is the UniProt SubCell term for this soluble enzyme, redundant with the more specific cytosol annotations.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0006166
purine ribonucleoside salvage
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: InterPro2GO electronic assertion of purine ribonucleoside salvage, capturing the general salvage-pathway role of HPRT1.
Reason: HPRT1 is the central 6-oxopurine salvage enzyme; the InterPro HGPRT signature (IPR005904) correctly maps to purine salvage. This is a good general parent for the more specific salvage terms.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Plays a central role in the generation of purine nucleotides through the purine salvage pathway.
|
|
GO:0046100
hypoxanthine metabolic process
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: ARBA electronic assertion of hypoxanthine metabolic process, redundant with the IBA and IMP annotations to the same term.
Reason: Correct; hypoxanthine is a direct substrate. The more specific hypoxanthine salvage term better captures the role.
Supporting Evidence:
PMID:9521733
catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua)
|
|
GO:0005515
protein binding
|
IPI
PMID:16189514 Towards a proteome-scale map of the human protein-protein in... |
MARK AS OVER ANNOTATED |
Summary: High-throughput yeast two-hybrid interaction (with NTAQ1/Q96HA8) from a proteome-scale interactome map; the bare protein binding term is uninformative about HPRT1 function.
Reason: Per curation guidelines the bare protein binding term should be avoided as it conveys no specific molecular function; this experimental IPI is retained (not removed) but flagged as over-annotated. No evidence that this HT interaction is functionally meaningful for HPRT1's salvage role.
Supporting Evidence:
PMID:16189514
Here we describe an initial version of a proteome-scale map of human binary protein-protein interactions.
|
|
GO:0005515
protein binding
|
IPI
PMID:19060904 An empirical framework for binary interactome mapping. |
MARK AS OVER ANNOTATED |
Summary: High-throughput binary interactome mapping; bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a systematic HT-Y2H interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:19060904
high-throughput yeast two-hybrid (HT-Y2H) interactions for human proteins are more precise than literature-curated interactions supported by a single publication
|
|
GO:0005515
protein binding
|
IPI
PMID:25416956 A proteome-scale map of the human interactome network. |
MARK AS OVER ANNOTATED |
Summary: High-throughput interactome map (with NTAQ1/Q96HA8); bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a proteome-scale interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:25416956
A proteome-scale map of the human interactome network.
|
|
GO:0005515
protein binding
|
IPI
PMID:25910212 Widespread macromolecular interaction perturbations in human... |
MARK AS OVER ANNOTATED |
Summary: High-throughput interactome perturbation study (with PRTFDC1/Q9NRG1); bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a systematic interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:25910212
Widespread macromolecular interaction perturbations in human genetic disorders.
|
|
GO:0005515
protein binding
|
IPI
PMID:31515488 Extensive disruption of protein interactions by genetic vari... |
MARK AS OVER ANNOTATED |
Summary: High-throughput variant-interaction profiling; bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a systematic interactome/variant study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:31515488
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
MARK AS OVER ANNOTATED |
Summary: High-throughput binary interactome reference map; bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a proteome-scale binary interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:32296183
A reference map of the human binary protein interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... |
MARK AS OVER ANNOTATED |
Summary: High-throughput interactome map of neurodegenerative disease proteins (with HTT/P42858 and SPRED1); bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a systematic interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
MARK AS OVER ANNOTATED |
Summary: High-throughput affinity-purification interactome (BioPlex; with PRTFDC1/Q9NRG1); bare protein binding term is uninformative.
Reason: Uninformative protein binding term from a proteome-scale AP-MS interactome study; retained as experimental IPI but marked over-annotated.
Supporting Evidence:
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:25416956 A proteome-scale map of the human interactome network. |
ACCEPT |
Summary: Self-interaction (P00492 with P00492), consistent with the biologically relevant homotetrameric assembly of the active enzyme.
Reason: Unlike the bare protein binding term, identical protein binding is informative here because the functional HPRT1 enzyme is a homotetramer, established by multiple crystal structures.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:25502805 A massively parallel pipeline to clone DNA variants and exam... |
ACCEPT |
Summary: Self-interaction detected by a massively parallel variant/interaction pipeline, consistent with the homotetrameric assembly.
Reason: Informative self-association annotation consistent with the established homotetramer; retained as a valid experimental annotation.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:31515488 Extensive disruption of protein interactions by genetic vari... |
ACCEPT |
Summary: Self-interaction detected in a systematic variant-interaction study, consistent with homotetramerization.
Reason: Informative self-association annotation consistent with the established homotetramer.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
ACCEPT |
Summary: Self-interaction from the human binary interactome reference map, consistent with the homotetrameric enzyme.
Reason: Informative self-association annotation consistent with the established homotetramer.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0005829
cytosol
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Electronic assertion of cytosolic activity transferred from the mouse ortholog, consistent with the soluble cytosolic enzyme.
Reason: Correct cytosolic localization, redundant with the IBA and IDA cytosol annotations.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0032264
IMP salvage
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Electronic assertion of IMP salvage from combined automated methods (UniPathway UPA00591), redundant with the IBA IMP salvage annotation.
Reason: Correct; HPRT1 produces IMP from hypoxanthine in the salvage pathway.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Purine metabolism; IMP biosynthesis via salvage pathway
|
|
GO:0042802
identical protein binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Electronic assertion of self-interaction transferred from the mouse ortholog, consistent with the homotetrameric assembly.
Reason: Informative self-association annotation consistent with the established homotetramer.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0044209
AMP salvage
|
IEA
GO_REF:0000107 |
REMOVE |
Summary: Electronic assertion of AMP salvage transferred from the mouse ortholog. HPRT does not act on adenine/AMP; adenine salvage is performed by APRT, not HPRT1.
Reason: This is an incorrect over-propagated electronic inference. HPRT1 salvages the 6-oxopurines hypoxanthine and guanine (forming IMP and GMP); it has no activity on adenine and does not directly participate in AMP salvage, which is catalyzed by adenine phosphoribosyltransferase (APRT). The UniProt catalytic activities and substrate specificity (Lys165 confers specificity for guanine and hypoxanthine over adenine) contradict an AMP salvage role.
Supporting Evidence:
PMID:8044844
Lys-165, which forms a hydrogen bond to O6 of GMP, appears to be critical for determining the specificity for guanine and hypoxanthine over adenine.
PMID:9521733
catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua)
|
|
GO:0052657
guanine phosphoribosyltransferase activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Electronic assertion of guanine phosphoribosyltransferase activity (RHEA:25424) from combined automated methods, redundant with the experimental IDA/IBA annotations.
Reason: Correct core catalytic activity; the IEA mapping agrees with experimental evidence (guanine + PRPP produces GMP).
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
|
|
GO:0005829
cytosol
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: Direct immunofluorescence localization (Human Protein Atlas) to the cytosol, confirming the soluble cytoplasmic localization.
Reason: Direct experimental (HPA immunofluorescence) support for the core cytosolic localization of this soluble enzyme.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
GO:0005829; C:cytosol; IDA:HPA.
|
|
GO:0032263
GMP salvage
|
IDA
PMID:4208686 Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT)... |
ACCEPT |
Summary: Direct assay of purified human HGPRT (Arnold, Lamb & Kelley 1973) supporting involvement in GMP salvage via the guanine to GMP reaction.
Reason: Purified human HGPRT was characterized biochemically; the enzyme's guanine phosphoribosyltransferase activity produces GMP directly, placing it in GMP salvage. The acts_upstream_of_or_within qualifier is acceptable, though involved_in is more precise for a direct pathway enzyme.
Supporting Evidence:
PMID:4208686
Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification and properties.
|
|
GO:0052657
guanine phosphoribosyltransferase activity
|
IDA
PMID:4208686 Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT)... |
ACCEPT |
Summary: Direct biochemical characterization of purified human HGPRT supporting the guanine phosphoribosyltransferase activity.
Reason: Core catalytic activity established by direct assay of the purified human enzyme.
Supporting Evidence:
PMID:4208686
Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification and properties.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9734274 |
ACCEPT |
Summary: Reactome traceable assertion (defective-HPRT1 reaction context) placing the enzyme in the cytosol.
Reason: Correct cytosolic localization from Reactome curation, consistent with all other localization evidence.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0032263
GMP salvage
|
IDA
PMID:4208686 Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT)... |
ACCEPT |
Summary: Direct evidence (purified human HGPRT) for involvement in GMP salvage; duplicate of the acts_upstream_of_or_within annotation with a more precise qualifier.
Reason: Core pathway role; the guanine to GMP reaction constitutes GMP salvage.
Supporting Evidence:
PMID:4208686
Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification and properties.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:8044844 The crystal structure of human hypoxanthine-guanine phosphor... |
ACCEPT |
Summary: Crystal structure of human HGPRT with bound GMP; the enzyme self-associates into the biologically active homotetramer.
Reason: Informative self-association annotation directly supported by the crystal structure and by the UniProt homotetramer annotation.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0070062
extracellular exosome
|
HDA
PMID:20458337 MHC class II-associated proteins in B-cell exosomes and pote... |
KEEP AS NON CORE |
Summary: High-throughput mass-spectrometry detection of HPRT1 in B-cell-derived exosomes. This is a proteomic sighting rather than the site of catalytic function.
Reason: HPRT1 is a soluble cytosolic salvage enzyme; its presence in the exosome proteome is a common finding for abundant cytosolic proteins and does not represent its functional localization. Retained as a non-core localization.
Supporting Evidence:
PMID:20458337
we first analyzed the total proteome of highly purified B cell-derived exosomes using sensitive and accurate mass spectrometry (MS), and identified 539 proteins
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-74215 |
ACCEPT |
Summary: Reactome traceable assertion placing the HPRT1 catalytic reaction in the cytosol.
Reason: Correct cytosolic localization from Reactome curation of the salvage reaction.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9748951 |
ACCEPT |
Summary: Reactome traceable assertion (6-mercaptopurine/6TIMP reaction context) placing the HPRT1 tetramer in the cytosol.
Reason: Correct cytosolic localization from Reactome curation.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0004422
hypoxanthine phosphoribosyltransferase activity
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
ACCEPT |
Summary: Direct catalytic-activity and structural characterization of the human enzyme (Ki determinations and structures of human HGPRT with inhibitors); supports the hypoxanthine phosphoribosyltransferase activity.
Reason: Although the abstract foregrounds the Plasmodium falciparum enzyme (antimalarial inhibitor design), the study explicitly assayed the corresponding human enzyme and determined structures of human HGPRT; this is a UniProt EC evidence source for HPRT1 catalytic activity. Core molecular function.
Supporting Evidence:
PMID:19527031
Structures of human HGPRT in complex with three ANPs are reported.
PMID:19527031
K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding human enzyme, HGPRT.
|
|
GO:0006178
guanine salvage
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
ACCEPT |
Summary: Direct characterization of the human enzyme's activity supporting its role in guanine salvage (guanine to GMP).
Reason: HPRT1 salvages guanine to GMP; the human enzyme was directly assayed in this study.
Supporting Evidence:
PMID:19527031
K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding human enzyme, HGPRT.
|
|
GO:0043103
hypoxanthine salvage
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
ACCEPT |
Summary: Direct characterization of the human enzyme supporting its role in hypoxanthine salvage (hypoxanthine to IMP).
Reason: HPRT1 salvages hypoxanthine to IMP; the human enzyme was directly assayed in this study. This is the most specific salvage term for the hypoxanthine reaction.
Supporting Evidence:
PMID:19527031
The purine salvage enzyme hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRT) is essential for purine nucleotide and hence nucleic acid synthesis
|
|
GO:0046038
GMP catabolic process
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
KEEP AS NON CORE |
Summary: The HPRT1 reaction is reversible; in the pyrophosphorolysis direction the enzyme can consume GMP (GMP + diphosphate produces guanine + PRPP), supporting a GMP catabolic-process role.
Reason: The physiological direction of HPRT1 is anabolic salvage (base + PRPP produces NMP), but the reaction is reversible and the reverse (pyrophosphorolysis) reaction was assayed. GMP catabolic process reflects this reverse activity but is not the core physiological role; retained as non-core.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
|
|
GO:0046040
IMP metabolic process
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
ACCEPT |
Summary: Direct characterization of the human enzyme supporting involvement in IMP metabolism (hypoxanthine to IMP and the reverse reaction).
Reason: HPRT1 directly produces and (reversibly) consumes IMP; involvement in IMP metabolic process is correct, though IMP salvage is the more specific term.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Reaction=IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-
|
|
GO:0051289
protein homotetramerization
|
IPI
PMID:15990111 The crystal structure of free human hypoxanthine-guanine pho... |
ACCEPT |
Summary: The free-enzyme crystal structure describes movement of subunits within the tetramer, consistent with the biologically active homotetrameric assembly.
Reason: HPRT1 assembles into a homotetramer, established by multiple crystal structures including the apoenzyme structure cited here; this is a meaningful, informative annotation.
Supporting Evidence:
PMID:15990111
relative movement of subunits within the tetramer
file:human/HPRT1/HPRT1-uniprot.txt
SUBUNIT: Homotetramer.
|
|
GO:0052657
guanine phosphoribosyltransferase activity
|
IDA
PMID:19527031 Inhibition of hypoxanthine-guanine phosphoribosyltransferase... |
ACCEPT |
Summary: Direct characterization of the human enzyme supporting the guanine phosphoribosyltransferase activity.
Reason: Core catalytic activity; the human enzyme was directly assayed in this study.
Supporting Evidence:
PMID:19527031
K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding human enzyme, HGPRT.
|
|
GO:0006166
purine ribonucleoside salvage
|
IMP
PMID:9824441 Purine metabolism in female heterozygotes for hypoxanthine-g... |
ACCEPT |
Summary: Study of purine metabolism in female heterozygotes for HPRT deficiency; reduced HPRT activity leads to purine overproduction, evidencing HPRT1's role in purine salvage.
Reason: Loss/reduction of HPRT activity in carriers causes enhanced purine nucleotide degradation and overproduction, demonstrating the enzyme's normal role in purine salvage (recycling bases and sparing de novo synthesis).
Supporting Evidence:
PMID:9824441
Female heterozygotes for HPRT deficiency show an enhanced purine nucleotide degradation and purine overproduction.
|
|
GO:0045964
positive regulation of dopamine metabolic process
|
IMP
PMID:8643611 Dopamine transporters are markedly reduced in Lesch-Nyhan di... |
MARK AS OVER ANNOTATED |
Summary: The cited study reports markedly reduced striatal dopamine transporters in Lesch-Nyhan disease patients. This reflects a downstream neurochemical consequence of complete HPRT deficiency, not a direct molecular role of HPRT1 in regulating dopamine metabolism.
Reason: HPRT1 is a purine salvage enzyme with no known direct activity on dopamine metabolism. The dopaminergic deficit observed in LND is a distal, poorly understood consequence of the metabolic/developmental derangement caused by HPRT loss; inferring positive regulation of dopamine metabolic process as an HPRT1 function over-interprets a disease-phenotype association. Retained (experimental IMP) but flagged as over-annotated rather than a core function.
Supporting Evidence:
PMID:8643611
a 50-63% reduction of the binding to DA transporters in the caudate, and a 64-75% reduction in the putamen of the LND patients was observed compared to the normal control group
|
|
GO:0046100
hypoxanthine metabolic process
|
IMP
PMID:9824441 Purine metabolism in female heterozygotes for hypoxanthine-g... |
ACCEPT |
Summary: HPRT-deficiency carrier study showing elevated hypoxanthine (and xanthine) excretion, evidencing HPRT1's normal role in metabolizing/salvaging hypoxanthine.
Reason: Reduced HPRT activity elevates hypoxanthine excretion, demonstrating the enzyme normally consumes hypoxanthine; involvement in hypoxanthine metabolic process is correct (hypoxanthine salvage is the more specific term).
Supporting Evidence:
PMID:9824441
An elevated hypoxanthine and/or xanthine excretion rate differentiated most heterozygotes for HPRT deficiency from non-carrier women
|
|
GO:0005737
cytoplasm
|
IDA
PMID:6300847 Isolation and characterization of a full-length expressible ... |
ACCEPT |
Summary: Expression of the cloned human HPRT cDNA yields active enzyme in cells, consistent with cytoplasmic localization of the salvage enzyme.
Reason: Correct cytoplasmic localization of this soluble enzyme, consistent with all other localization evidence.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm.
|
|
GO:0006164
purine nucleotide biosynthetic process
|
IMP
PMID:9824441 Purine metabolism in female heterozygotes for hypoxanthine-g... |
KEEP AS NON CORE |
Summary: HPRT-deficiency carrier study; the salvage pathway produces the purine nucleotides IMP and GMP, contributing to purine nucleotide biosynthesis.
Reason: HPRT1 does biosynthesize purine nucleotides (IMP, GMP) via salvage, so this broad parent term is correct, but the specific salvage terms (IMP salvage, GMP salvage, purine ribonucleoside salvage) capture the function more precisely. Retained as non-core general parent.
Supporting Evidence:
file:human/HPRT1/HPRT1-uniprot.txt
Plays a central role in the generation of purine nucleotides through the purine salvage pathway.
|
|
GO:0000287
magnesium ion binding
|
IDA
PMID:10360366 The 2.0 A structure of human hypoxanthine-guanine phosphorib... |
ACCEPT |
Summary: Transition-state analog crystal structure showing two Mg2+ ions bound at the active site sandwiching the pyrophosphate, directly supporting magnesium ion binding.
Reason: Directly demonstrated by the structure of human HGPRT with the transition-state analog and Mg2+-pyrophosphate; the enzyme binds two Mg2+ ions per subunit essential for catalysis.
Supporting Evidence:
PMID:10360366
Two Mg2+ ions sandwich the pyrophosphate and contact both hydroxyls of the ribosyl analog.
|
|
GO:0004422
hypoxanthine phosphoribosyltransferase activity
|
IDA
PMID:6300847 Isolation and characterization of a full-length expressible ... |
ACCEPT |
Summary: The cloned full-length human HPRT cDNA expresses functional HPRT enzyme activity, directly supporting the hypoxanthine phosphoribosyltransferase activity.
Reason: Expression of the human cDNA restored HPRT enzyme activity in HPRT-deficient cells (HAT selection), confirming the core catalytic function.
Supporting Evidence:
PMID:6300847
leads to the expression of human HPRT enzyme activity in cells stably transfected and selected for enzyme activity in hypoxanthine/aminopterin/thymidine medium
|
|
GO:0004422
hypoxanthine phosphoribosyltransferase activity
|
IDA
PMID:9521733 Catalysis in human hypoxanthine-guanine phosphoribosyltransf... |
ACCEPT |
Summary: Catalytic mechanism study of human HGPRTase (Asp137 general acid/base; characterization of the hypoxanthine to IMP reaction), directly supporting the hypoxanthine phosphoribosyltransferase activity.
Reason: Detailed kinetic and mechanistic characterization of the purified/mutant human enzyme; core catalytic function.
Supporting Evidence:
PMID:9521733
catalyzes the reversible formation of IMP and GMP from their respective bases hypoxanthine (Hx) and guanine (Gua)
|
UniProt: P00492 (HPRT_HUMAN); HGNC:5157; EC 2.4.2.8; 218 aa; gene on Xq26.
HPRT1 is the cytosolic hypoxanthine-guanine phosphoribosyltransferase of the
purine salvage pathway. It transfers the 5-phosphoribosyl group from PRPP
(5-phospho-alpha-D-ribose 1-diphosphate) onto a 6-oxopurine base:
- hypoxanthine -> IMP (RHEA:17973)
- guanine -> GMP (RHEA:25424)
This recycles free purine bases into nucleotides, sparing the energetically costly
de novo pathway.
Kinetics (PMID:10338013): KM 5.4 uM IMP, 0.45 uM hypoxanthine, 25 uM PPi, 31 uM PRPP.
PMID:9521733 (Xu & Grubmeyer 1998): "Hypoxanthine-guanine phosphoribosyltransferase
(HGPRTase) catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua) and the phosphoribosyl donor
5-phosphoribosyl-1-pyrophosphate (PRPP)." Asp137 = general acid/base; Lys165 ground-state
interactions. (Note: numbering differs from mature protein; ACT_SITE is residue 138 in
UniProt = proton acceptor.)
PMID:19527031 (Keough et al. 2009, J Med Chem): abstract foregrounds the Plasmodium
falciparum enzyme (antimalarial ANP inhibitors) but explicitly determined Ki values for
"the corresponding human enzyme, HGPRT" and reports "Structures of human HGPRT in complex
with three ANPs." This is a UniProt EC evidence source and validly supports human HPRT1
catalytic activity (HPX-PRT + GPRT). Do NOT remove.
Crystal structures: with bound GMP (PMID:8044844, Cell 1994), with transition-state
analog immucillinGP + Mg2+-PPi (PMID:10360366), free apoenzyme showing conformational
plasticity (PMID:15990111), ternary complex with PRPP/Mg2+/HPP (PMID:10338013). Core
alpha/beta PRTase (type I) fold. Two Mg2+ ions sandwich the pyrophosphate.
300 disease-associated mutations reported (PMID:18067674). UniProt lists many LNS/HRH
missense/deletion variants.
id: P00492
gene_symbol: HPRT1
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: Cytosolic hypoxanthine-guanine phosphoribosyltransferase (HGPRT; EC 2.4.2.8),
the central enzyme of the purine salvage pathway. It transfers the 5-phosphoribosyl
group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) onto a 6-oxopurine base,
converting hypoxanthine to inosine monophosphate (IMP) and guanine to guanosine
monophosphate (GMP), thereby recycling free purine bases into nucleotides and sparing
the energetically costly de novo purine biosynthesis pathway. The catalytic reaction
requires magnesium (two Mg2+ ions per subunit, bound largely via the substrate) and the
active enzyme is a homotetramer. HPRT1 is expressed broadly with highest relative
activity in the basal ganglia. Complete loss of HPRT activity causes Lesch-Nyhan
syndrome (hyperuricemia with severe neurological dysfunction including dystonia,
choreoathetosis, intellectual disability and compulsive self-injurious behavior);
partial deficiency causes HPRT-related hyperuricemia/gout (Kelley-Seegmiller syndrome).
existing_annotations:
- term:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: Phylogenetically inferred core catalytic activity, converting hypoxanthine
plus PRPP to IMP. This is a defining, experimentally established function of HPRT1.
action: ACCEPT
reason: This is one of the two core molecular functions of HPRT1, supported by direct
experimental catalytic-activity data and structural studies, and consistent across
IBA, IEA and IDA evidence. EC 2.4.2.8.
supported_by:
- reference_id: PMID:9521733
supporting_text: Hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) catalyzes
the reversible formation of IMP and GMP from their respective bases hypoxanthine
(Hx) and guanine (Gua) and the phosphoribosyl donor 5-phosphoribosyl-1-pyrophosphate
(PRPP).
- term:
id: GO:0046100
label: hypoxanthine metabolic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: Phylogenetically inferred involvement in hypoxanthine metabolism, reflecting
the enzyme's use of hypoxanthine as a substrate to form IMP.
action: ACCEPT
reason: HPRT1 directly consumes hypoxanthine in the salvage reaction, so involvement
in hypoxanthine metabolic process is correct, though the more specific salvage terms
(hypoxanthine salvage, IMP salvage) better capture the physiological role.
supported_by:
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
- term:
id: GO:0005829
label: cytosol
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: Phylogenetically inferred cytosolic localization, consistent with the
soluble cytoplasmic nature of the salvage enzyme.
action: ACCEPT
reason: HPRT1 is a soluble cytosolic enzyme (UniProt subcellular location cytoplasm),
confirmed by IDA (HPA) and multiple orthogonal lines of evidence.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0032263
label: GMP salvage
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: Phylogenetically inferred role in GMP salvage, matching the guanine to GMP
reaction catalyzed by HPRT1.
action: ACCEPT
reason: The guanine phosphoribosyltransferase reaction produces GMP directly from the
salvaged base guanine, so involvement in GMP salvage is a core pathway role.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
- term:
id: GO:0006178
label: guanine salvage
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: Phylogenetically inferred role in guanine salvage, reflecting HPRT1 recycling
free guanine into GMP.
action: ACCEPT
reason: HPRT1 salvages guanine by phosphoribosylation to GMP; this is a core pathway
role also supported by direct experimental evidence.
supported_by:
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
- term:
id: GO:0032264
label: IMP salvage
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: Phylogenetically inferred role in IMP salvage, matching the hypoxanthine to
IMP reaction.
action: ACCEPT
reason: The hypoxanthine phosphoribosyltransferase reaction produces IMP from the
salvaged base hypoxanthine; UniProt records IMP biosynthesis via the salvage pathway
as step 1/1 for this enzyme.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Purine metabolism; IMP biosynthesis via salvage pathway
- term:
id: GO:0000287
label: magnesium ion binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: Phylogenetically inferred magnesium binding, consistent with the Mg2+
requirement of the phosphoribosyltransfer reaction.
action: ACCEPT
reason: HPRT1 binds two Mg2+ ions per subunit which are essential for catalysis; this
is directly supported by structural studies (transition-state analog complex with
Mg2+-pyrophosphate) and UniProt cofactor annotation.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Note=Binds 2 magnesium ions per subunit.
- reference_id: PMID:10360366
supporting_text: Two Mg2+ ions sandwich the pyrophosphate and contact both hydroxyls
of the ribosyl analog.
- term:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: Electronic assertion of hypoxanthine phosphoribosyltransferase activity from
combined automated methods, redundant with the experimental IDA/IBA annotations.
action: ACCEPT
reason: Correct core catalytic activity; the IEA mapping (ARBA/InterPro/RHEA:17973)
agrees with experimental evidence.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: EC=2.4.2.8 {ECO:0000269|PubMed:10338013, ECO:0000269|PubMed:19527031};
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: located_in
review:
summary: Electronic assertion of cytoplasmic localization, consistent with the
cytosolic nature of the enzyme.
action: ACCEPT
reason: Correct localization; cytoplasm is the UniProt SubCell term for this soluble
enzyme, redundant with the more specific cytosol annotations.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0006166
label: purine ribonucleoside salvage
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: involved_in
review:
summary: InterPro2GO electronic assertion of purine ribonucleoside salvage, capturing
the general salvage-pathway role of HPRT1.
action: ACCEPT
reason: HPRT1 is the central 6-oxopurine salvage enzyme; the InterPro HGPRT signature
(IPR005904) correctly maps to purine salvage. This is a good general parent for the
more specific salvage terms.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Plays a central role in the generation of purine nucleotides through
the purine salvage pathway.
- term:
id: GO:0046100
label: hypoxanthine metabolic process
evidence_type: IEA
original_reference_id: GO_REF:0000117
qualifier: involved_in
review:
summary: ARBA electronic assertion of hypoxanthine metabolic process, redundant with
the IBA and IMP annotations to the same term.
action: ACCEPT
reason: Correct; hypoxanthine is a direct substrate. The more specific hypoxanthine
salvage term better captures the role.
supported_by:
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16189514
qualifier: enables
review:
summary: High-throughput yeast two-hybrid interaction (with NTAQ1/Q96HA8) from a
proteome-scale interactome map; the bare protein binding term is uninformative about
HPRT1 function.
action: MARK_AS_OVER_ANNOTATED
reason: Per curation guidelines the bare protein binding term should be avoided as it
conveys no specific molecular function; this experimental IPI is retained (not
removed) but flagged as over-annotated. No evidence that this HT interaction is
functionally meaningful for HPRT1's salvage role.
supported_by:
- reference_id: PMID:16189514
supporting_text: Here we describe an initial version of a proteome-scale map of human
binary protein-protein interactions.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19060904
qualifier: enables
review:
summary: High-throughput binary interactome mapping; bare protein binding term is
uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a systematic HT-Y2H interactome study;
retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:19060904
supporting_text: high-throughput yeast two-hybrid (HT-Y2H) interactions for human
proteins are more precise than literature-curated interactions supported by a single
publication
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25416956
qualifier: enables
review:
summary: High-throughput interactome map (with NTAQ1/Q96HA8); bare protein binding
term is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a proteome-scale interactome study;
retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:25416956
supporting_text: A proteome-scale map of the human interactome network.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25910212
qualifier: enables
review:
summary: High-throughput interactome perturbation study (with PRTFDC1/Q9NRG1); bare
protein binding term is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a systematic interactome study;
retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:25910212
supporting_text: Widespread macromolecular interaction perturbations in human genetic
disorders.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31515488
qualifier: enables
review:
summary: High-throughput variant-interaction profiling; bare protein binding term is
uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a systematic interactome/variant study;
retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:31515488
supporting_text: Extensive disruption of protein interactions by genetic variants
across the allele frequency spectrum in human populations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
qualifier: enables
review:
summary: High-throughput binary interactome reference map; bare protein binding term
is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a proteome-scale binary interactome
study; retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:32296183
supporting_text: A reference map of the human binary protein interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32814053
qualifier: enables
review:
summary: High-throughput interactome map of neurodegenerative disease proteins (with
HTT/P42858 and SPRED1); bare protein binding term is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a systematic interactome study;
retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:32814053
supporting_text: Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
qualifier: enables
review:
summary: High-throughput affinity-purification interactome (BioPlex; with PRTFDC1/Q9NRG1);
bare protein binding term is uninformative.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative protein binding term from a proteome-scale AP-MS interactome
study; retained as experimental IPI but marked over-annotated.
supported_by:
- reference_id: PMID:33961781
supporting_text: Dual proteome-scale networks reveal cell-specific remodeling of the
human interactome.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:25416956
qualifier: enables
review:
summary: Self-interaction (P00492 with P00492), consistent with the biologically
relevant homotetrameric assembly of the active enzyme.
action: ACCEPT
reason: Unlike the bare protein binding term, identical protein binding is
informative here because the functional HPRT1 enzyme is a homotetramer, established
by multiple crystal structures.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:25502805
qualifier: enables
review:
summary: Self-interaction detected by a massively parallel variant/interaction pipeline,
consistent with the homotetrameric assembly.
action: ACCEPT
reason: Informative self-association annotation consistent with the established
homotetramer; retained as a valid experimental annotation.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:31515488
qualifier: enables
review:
summary: Self-interaction detected in a systematic variant-interaction study,
consistent with homotetramerization.
action: ACCEPT
reason: Informative self-association annotation consistent with the established
homotetramer.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
qualifier: enables
review:
summary: Self-interaction from the human binary interactome reference map, consistent
with the homotetrameric enzyme.
action: ACCEPT
reason: Informative self-association annotation consistent with the established
homotetramer.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0005829
label: cytosol
evidence_type: IEA
original_reference_id: GO_REF:0000107
qualifier: is_active_in
review:
summary: Electronic assertion of cytosolic activity transferred from the mouse
ortholog, consistent with the soluble cytosolic enzyme.
action: ACCEPT
reason: Correct cytosolic localization, redundant with the IBA and IDA cytosol
annotations.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0032264
label: IMP salvage
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: involved_in
review:
summary: Electronic assertion of IMP salvage from combined automated methods
(UniPathway UPA00591), redundant with the IBA IMP salvage annotation.
action: ACCEPT
reason: Correct; HPRT1 produces IMP from hypoxanthine in the salvage pathway.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Purine metabolism; IMP biosynthesis via salvage pathway
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
qualifier: enables
review:
summary: Electronic assertion of self-interaction transferred from the mouse ortholog,
consistent with the homotetrameric assembly.
action: ACCEPT
reason: Informative self-association annotation consistent with the established
homotetramer.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0044209
label: AMP salvage
evidence_type: IEA
original_reference_id: GO_REF:0000107
qualifier: involved_in
review:
summary: Electronic assertion of AMP salvage transferred from the mouse ortholog. HPRT
does not act on adenine/AMP; adenine salvage is performed by APRT, not HPRT1.
action: REMOVE
reason: This is an incorrect over-propagated electronic inference. HPRT1 salvages the
6-oxopurines hypoxanthine and guanine (forming IMP and GMP); it has no activity on
adenine and does not directly participate in AMP salvage, which is catalyzed by
adenine phosphoribosyltransferase (APRT). The UniProt catalytic activities and
substrate specificity (Lys165 confers specificity for guanine and hypoxanthine over
adenine) contradict an AMP salvage role.
supported_by:
- reference_id: PMID:8044844
supporting_text: Lys-165, which forms a hydrogen bond to O6 of GMP, appears to be
critical for determining the specificity for guanine and hypoxanthine over adenine.
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
- term:
id: GO:0052657
label: guanine phosphoribosyltransferase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: Electronic assertion of guanine phosphoribosyltransferase activity
(RHEA:25424) from combined automated methods, redundant with the experimental
IDA/IBA annotations.
action: ACCEPT
reason: Correct core catalytic activity; the IEA mapping agrees with experimental
evidence (guanine + PRPP produces GMP).
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: GO_REF:0000052
qualifier: located_in
review:
summary: Direct immunofluorescence localization (Human Protein Atlas) to the cytosol,
confirming the soluble cytoplasmic localization.
action: ACCEPT
reason: Direct experimental (HPA immunofluorescence) support for the core cytosolic
localization of this soluble enzyme.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'GO:0005829; C:cytosol; IDA:HPA.'
- term:
id: GO:0032263
label: GMP salvage
evidence_type: IDA
original_reference_id: PMID:4208686
qualifier: acts_upstream_of_or_within
review:
summary: Direct assay of purified human HGPRT (Arnold, Lamb & Kelley 1973) supporting
involvement in GMP salvage via the guanine to GMP reaction.
action: ACCEPT
reason: Purified human HGPRT was characterized biochemically; the enzyme's guanine
phosphoribosyltransferase activity produces GMP directly, placing it in GMP salvage.
The acts_upstream_of_or_within qualifier is acceptable, though involved_in is more
precise for a direct pathway enzyme.
supported_by:
- reference_id: PMID:4208686
supporting_text: 'Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification
and properties.'
- term:
id: GO:0052657
label: guanine phosphoribosyltransferase activity
evidence_type: IDA
original_reference_id: PMID:4208686
qualifier: enables
review:
summary: Direct biochemical characterization of purified human HGPRT supporting the
guanine phosphoribosyltransferase activity.
action: ACCEPT
reason: Core catalytic activity established by direct assay of the purified human
enzyme.
supported_by:
- reference_id: PMID:4208686
supporting_text: 'Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification
and properties.'
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9734274
qualifier: located_in
review:
summary: Reactome traceable assertion (defective-HPRT1 reaction context) placing the
enzyme in the cytosol.
action: ACCEPT
reason: Correct cytosolic localization from Reactome curation, consistent with all
other localization evidence.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0032263
label: GMP salvage
evidence_type: IDA
original_reference_id: PMID:4208686
qualifier: involved_in
review:
summary: Direct evidence (purified human HGPRT) for involvement in GMP salvage;
duplicate of the acts_upstream_of_or_within annotation with a more precise qualifier.
action: ACCEPT
reason: Core pathway role; the guanine to GMP reaction constitutes GMP salvage.
supported_by:
- reference_id: PMID:4208686
supporting_text: 'Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification
and properties.'
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:8044844
qualifier: enables
review:
summary: Crystal structure of human HGPRT with bound GMP; the enzyme self-associates
into the biologically active homotetramer.
action: ACCEPT
reason: Informative self-association annotation directly supported by the crystal
structure and by the UniProt homotetramer annotation.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0070062
label: extracellular exosome
evidence_type: HDA
original_reference_id: PMID:20458337
qualifier: located_in
review:
summary: High-throughput mass-spectrometry detection of HPRT1 in B-cell-derived
exosomes. This is a proteomic sighting rather than the site of catalytic function.
action: KEEP_AS_NON_CORE
reason: HPRT1 is a soluble cytosolic salvage enzyme; its presence in the exosome
proteome is a common finding for abundant cytosolic proteins and does not represent
its functional localization. Retained as a non-core localization.
supported_by:
- reference_id: PMID:20458337
supporting_text: we first analyzed the total proteome of highly purified B cell-derived
exosomes using sensitive and accurate mass spectrometry (MS), and identified 539
proteins
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-74215
qualifier: located_in
review:
summary: Reactome traceable assertion placing the HPRT1 catalytic reaction in the
cytosol.
action: ACCEPT
reason: Correct cytosolic localization from Reactome curation of the salvage reaction.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9748951
qualifier: located_in
review:
summary: Reactome traceable assertion (6-mercaptopurine/6TIMP reaction context)
placing the HPRT1 tetramer in the cytosol.
action: ACCEPT
reason: Correct cytosolic localization from Reactome curation.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: enables
review:
summary: Direct catalytic-activity and structural characterization of the human enzyme
(Ki determinations and structures of human HGPRT with inhibitors); supports the
hypoxanthine phosphoribosyltransferase activity.
action: ACCEPT
reason: Although the abstract foregrounds the Plasmodium falciparum enzyme (antimalarial
inhibitor design), the study explicitly assayed the corresponding human enzyme and
determined structures of human HGPRT; this is a UniProt EC evidence source for HPRT1
catalytic activity. Core molecular function.
supported_by:
- reference_id: PMID:19527031
supporting_text: Structures of human HGPRT in complex with three ANPs are reported.
- reference_id: PMID:19527031
supporting_text: K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding
human enzyme, HGPRT.
- term:
id: GO:0006178
label: guanine salvage
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: involved_in
review:
summary: Direct characterization of the human enzyme's activity supporting its role in
guanine salvage (guanine to GMP).
action: ACCEPT
reason: HPRT1 salvages guanine to GMP; the human enzyme was directly assayed in this
study.
supported_by:
- reference_id: PMID:19527031
supporting_text: K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding
human enzyme, HGPRT.
- term:
id: GO:0043103
label: hypoxanthine salvage
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: involved_in
review:
summary: Direct characterization of the human enzyme supporting its role in
hypoxanthine salvage (hypoxanthine to IMP).
action: ACCEPT
reason: HPRT1 salvages hypoxanthine to IMP; the human enzyme was directly assayed in
this study. This is the most specific salvage term for the hypoxanthine reaction.
supported_by:
- reference_id: PMID:19527031
supporting_text: The purine salvage enzyme hypoxanthine-guanine-xanthine phosphoribosyltransferase
(HGXPRT) is essential for purine nucleotide and hence nucleic acid synthesis
- term:
id: GO:0046038
label: GMP catabolic process
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: involved_in
review:
summary: The HPRT1 reaction is reversible; in the pyrophosphorolysis direction the
enzyme can consume GMP (GMP + diphosphate produces guanine + PRPP), supporting a GMP
catabolic-process role.
action: KEEP_AS_NON_CORE
reason: The physiological direction of HPRT1 is anabolic salvage (base + PRPP produces
NMP), but the reaction is reversible and the reverse (pyrophosphorolysis) reaction was
assayed. GMP catabolic process reflects this reverse activity but is not the core
physiological role; retained as non-core.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
- term:
id: GO:0046040
label: IMP metabolic process
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: involved_in
review:
summary: Direct characterization of the human enzyme supporting involvement in IMP
metabolism (hypoxanthine to IMP and the reverse reaction).
action: ACCEPT
reason: HPRT1 directly produces and (reversibly) consumes IMP; involvement in IMP
metabolic process is correct, though IMP salvage is the more specific term.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-
- term:
id: GO:0051289
label: protein homotetramerization
evidence_type: IPI
original_reference_id: PMID:15990111
qualifier: involved_in
review:
summary: The free-enzyme crystal structure describes movement of subunits within the
tetramer, consistent with the biologically active homotetrameric assembly.
action: ACCEPT
reason: HPRT1 assembles into a homotetramer, established by multiple crystal structures
including the apoenzyme structure cited here; this is a meaningful, informative
annotation.
supported_by:
- reference_id: PMID:15990111
supporting_text: relative movement of subunits within the tetramer
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBUNIT: Homotetramer.'
- term:
id: GO:0052657
label: guanine phosphoribosyltransferase activity
evidence_type: IDA
original_reference_id: PMID:19527031
qualifier: enables
review:
summary: Direct characterization of the human enzyme supporting the guanine
phosphoribosyltransferase activity.
action: ACCEPT
reason: Core catalytic activity; the human enzyme was directly assayed in this study.
supported_by:
- reference_id: PMID:19527031
supporting_text: K(i) values for 19 ANPs were determined for Pf HGXPRT and the corresponding
human enzyme, HGPRT.
- term:
id: GO:0006166
label: purine ribonucleoside salvage
evidence_type: IMP
original_reference_id: PMID:9824441
qualifier: involved_in
review:
summary: Study of purine metabolism in female heterozygotes for HPRT deficiency;
reduced HPRT activity leads to purine overproduction, evidencing HPRT1's role in
purine salvage.
action: ACCEPT
reason: Loss/reduction of HPRT activity in carriers causes enhanced purine nucleotide
degradation and overproduction, demonstrating the enzyme's normal role in purine
salvage (recycling bases and sparing de novo synthesis).
supported_by:
- reference_id: PMID:9824441
supporting_text: Female heterozygotes for HPRT deficiency show an enhanced purine
nucleotide degradation and purine overproduction.
- term:
id: GO:0045964
label: positive regulation of dopamine metabolic process
evidence_type: IMP
original_reference_id: PMID:8643611
qualifier: involved_in
review:
summary: The cited study reports markedly reduced striatal dopamine transporters in
Lesch-Nyhan disease patients. This reflects a downstream neurochemical consequence
of complete HPRT deficiency, not a direct molecular role of HPRT1 in regulating
dopamine metabolism.
action: MARK_AS_OVER_ANNOTATED
reason: HPRT1 is a purine salvage enzyme with no known direct activity on dopamine
metabolism. The dopaminergic deficit observed in LND is a distal, poorly understood
consequence of the metabolic/developmental derangement caused by HPRT loss; inferring
positive regulation of dopamine metabolic process as an HPRT1 function over-interprets
a disease-phenotype association. Retained (experimental IMP) but flagged as
over-annotated rather than a core function.
supported_by:
- reference_id: PMID:8643611
supporting_text: a 50-63% reduction of the binding to DA transporters in the caudate,
and a 64-75% reduction in the putamen of the LND patients was observed compared to
the normal control group
- term:
id: GO:0046100
label: hypoxanthine metabolic process
evidence_type: IMP
original_reference_id: PMID:9824441
qualifier: involved_in
review:
summary: HPRT-deficiency carrier study showing elevated hypoxanthine (and xanthine)
excretion, evidencing HPRT1's normal role in metabolizing/salvaging hypoxanthine.
action: ACCEPT
reason: Reduced HPRT activity elevates hypoxanthine excretion, demonstrating the
enzyme normally consumes hypoxanthine; involvement in hypoxanthine metabolic process
is correct (hypoxanthine salvage is the more specific term).
supported_by:
- reference_id: PMID:9824441
supporting_text: An elevated hypoxanthine and/or xanthine excretion rate differentiated
most heterozygotes for HPRT deficiency from non-carrier women
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:6300847
qualifier: located_in
review:
summary: Expression of the cloned human HPRT cDNA yields active enzyme in cells,
consistent with cytoplasmic localization of the salvage enzyme.
action: ACCEPT
reason: Correct cytoplasmic localization of this soluble enzyme, consistent with all
other localization evidence.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm.'
- term:
id: GO:0006164
label: purine nucleotide biosynthetic process
evidence_type: IMP
original_reference_id: PMID:9824441
qualifier: involved_in
review:
summary: HPRT-deficiency carrier study; the salvage pathway produces the purine
nucleotides IMP and GMP, contributing to purine nucleotide biosynthesis.
action: KEEP_AS_NON_CORE
reason: HPRT1 does biosynthesize purine nucleotides (IMP, GMP) via salvage, so this
broad parent term is correct, but the specific salvage terms (IMP salvage, GMP
salvage, purine ribonucleoside salvage) capture the function more precisely. Retained
as non-core general parent.
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Plays a central role in the generation of purine nucleotides through
the purine salvage pathway.
- term:
id: GO:0000287
label: magnesium ion binding
evidence_type: IDA
original_reference_id: PMID:10360366
qualifier: enables
review:
summary: Transition-state analog crystal structure showing two Mg2+ ions bound at the
active site sandwiching the pyrophosphate, directly supporting magnesium ion binding.
action: ACCEPT
reason: Directly demonstrated by the structure of human HGPRT with the transition-state
analog and Mg2+-pyrophosphate; the enzyme binds two Mg2+ ions per subunit essential
for catalysis.
supported_by:
- reference_id: PMID:10360366
supporting_text: Two Mg2+ ions sandwich the pyrophosphate and contact both hydroxyls
of the ribosyl analog.
- term:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
evidence_type: IDA
original_reference_id: PMID:6300847
qualifier: enables
review:
summary: The cloned full-length human HPRT cDNA expresses functional HPRT enzyme
activity, directly supporting the hypoxanthine phosphoribosyltransferase activity.
action: ACCEPT
reason: Expression of the human cDNA restored HPRT enzyme activity in HPRT-deficient
cells (HAT selection), confirming the core catalytic function.
supported_by:
- reference_id: PMID:6300847
supporting_text: leads to the expression of human HPRT enzyme activity in cells stably
transfected and selected for enzyme activity in hypoxanthine/aminopterin/thymidine
medium
- term:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
evidence_type: IDA
original_reference_id: PMID:9521733
qualifier: enables
review:
summary: Catalytic mechanism study of human HGPRTase (Asp137 general acid/base;
characterization of the hypoxanthine to IMP reaction), directly supporting the
hypoxanthine phosphoribosyltransferase activity.
action: ACCEPT
reason: Detailed kinetic and mechanistic characterization of the purified/mutant human
enzyme; core catalytic function.
supported_by:
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
core_functions:
- description: Hypoxanthine phosphoribosyltransferase activity; transfers the
5-phosphoribosyl group from PRPP onto hypoxanthine to form IMP, salvaging hypoxanthine
into the purine nucleotide pool.
molecular_function:
id: GO:0004422
label: hypoxanthine phosphoribosyltransferase activity
directly_involved_in:
- id: GO:0006166
label: purine ribonucleoside salvage
locations:
- id: GO:0005829
label: cytosol
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-
- reference_id: PMID:9521733
supporting_text: catalyzes the reversible formation of IMP and GMP from their respective
bases hypoxanthine (Hx) and guanine (Gua)
- description: Guanine phosphoribosyltransferase activity; transfers the 5-phosphoribosyl
group from PRPP onto guanine to form GMP, salvaging guanine into the purine nucleotide
pool. Requires magnesium as cofactor; the active enzyme is a cytosolic homotetramer.
molecular_function:
id: GO:0052657
label: guanine phosphoribosyltransferase activity
directly_involved_in:
- id: GO:0006166
label: purine ribonucleoside salvage
locations:
- id: GO:0005829
label: cytosol
supported_by:
- reference_id: file:human/HPRT1/HPRT1-uniprot.txt
supporting_text: Reaction=GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-
- reference_id: PMID:4208686
supporting_text: 'Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification
and properties.'
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO
terms
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data to
orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:10360366
title: The 2.0 A structure of human hypoxanthine-guanine phosphoribosyltransferase
in complex with a transition-state analog inhibitor.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Structure of human HGPRT with transition-state analog and Mg2+-PPi;
directly supports magnesium ion binding and catalytic mechanism.
- id: PMID:15990111
title: The crystal structure of free human hypoxanthine-guanine phosphoribosyltransferase
reveals extensive conformational plasticity throughout the catalytic cycle.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Apoenzyme structure; describes movement of subunits within the tetramer,
supporting the homotetramer annotation.
- id: PMID:16189514
title: Towards a proteome-scale map of the human protein-protein interaction network.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: High-throughput Y2H interactome; supports only a bare protein binding
annotation, uninformative for HPRT1 function.
- id: PMID:19060904
title: An empirical framework for binary interactome mapping.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: Systematic HT-Y2H framework paper; underlies a bare protein binding
annotation.
- id: PMID:19527031
title: 'Inhibition of hypoxanthine-guanine phosphoribosyltransferase by acyclic
nucleoside phosphonates: a new class of antimalarial therapeutics.'
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Abstract foregrounds the P. falciparum enzyme but explicitly assays the
corresponding human HGPRT (Ki values) and reports structures of human HGPRT; a
UniProt EC 2.4.2.8 evidence source for HPRT1 catalytic activity.
- id: PMID:20458337
title: MHC class II-associated proteins in B-cell exosomes and potential functional
implications for exosome biogenesis.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT mass-spec detection of HPRT1 in B-cell exosome proteome; a sighting,
not functional localization.
- id: PMID:25416956
title: A proteome-scale map of the human interactome network.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT interactome map; supports bare protein binding and self-interaction
(identical protein binding) annotations.
- id: PMID:25502805
title: A massively parallel pipeline to clone DNA variants and examine molecular
phenotypes of human disease mutations.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT variant/interaction pipeline; supports a self-interaction (identical
protein binding) annotation consistent with the homotetramer.
- id: PMID:25910212
title: Widespread macromolecular interaction perturbations in human genetic disorders.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT interactome perturbation study; supports a bare protein binding
annotation.
- id: PMID:31515488
title: Extensive disruption of protein interactions by genetic variants across the
allele frequency spectrum in human populations.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT variant-interaction study; supports bare protein binding and
self-interaction annotations.
- id: PMID:32296183
title: A reference map of the human binary protein interactome.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT binary interactome reference map (HuRI); supports bare protein binding
and self-interaction annotations.
- id: PMID:32814053
title: Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins
and Uncovers Widespread Protein Aggregation in Affected Brains.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HT interactome of neurodegenerative disease proteins; supports a bare
protein binding annotation (incl. HTT).
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human
interactome.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: BioPlex AP-MS interactome; supports a bare protein binding annotation.
- id: PMID:4208686
title: 'Human hypoxanthine-guanine phosphoribosyltransferase (HGPRT): purification
and properties.'
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Classic purification/biochemical characterization of the human enzyme;
supports guanine PRT activity and GMP salvage (abstract-only in cache; curator read
full text).
- id: PMID:6300847
title: Isolation and characterization of a full-length expressible cDNA for human
hypoxanthine phosphoribosyl transferase.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Cloned human HPRT cDNA expresses functional enzyme activity (HAT
selection); supports hypoxanthine PRT activity and cytoplasmic localization.
- id: PMID:8044844
title: The crystal structure of human hypoxanthine-guanine phosphoribosyltransferase
with bound GMP.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Structure with bound GMP; Lys165 confers specificity for guanine and
hypoxanthine over adenine (argues against AMP salvage).
- id: PMID:8643611
title: Dopamine transporters are markedly reduced in Lesch-Nyhan disease in vivo.
findings: []
reference_review:
relevance: MEDIUM
correctness: MISCITED
review_notes: Documents reduced striatal DA transporters in LND patients (a downstream
disease phenotype); does not establish an HPRT1 molecular function of regulating
dopamine metabolism. Underlies an over-annotated GO:0045964 annotation.
- id: PMID:9521733
title: 'Catalysis in human hypoxanthine-guanine phosphoribosyltransferase: Asp 137
acts as a general acid/base.'
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Mechanistic study of human HGPRTase; states the enzyme catalyzes
reversible IMP/GMP formation from hypoxanthine/guanine and PRPP.
- id: PMID:9824441
title: Purine metabolism in female heterozygotes for hypoxanthine-guanine phosphoribosyltransferase
deficiency.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Carrier study; reduced HPRT activity causes purine overproduction and
elevated hypoxanthine/xanthine excretion, evidencing the salvage role.
- id: Reactome:R-HSA-74215
title: HPRT1 catalyzes the conversion of guanine or hypoxanthine to GMP or IMP
findings: []
- id: Reactome:R-HSA-9734274
title: Defective HPRT1 does not convert guanine or hypoxanthine to GMP or IMP
findings: []
- id: Reactome:R-HSA-9748951
title: HPRT1 tetramer transfers phosphoribosyl group to 6MP to form 6TIMP
findings: []