Testis-specific 17-beta-hydroxysteroid dehydrogenase type 3 (17beta-HSD3), a member of the short-chain dehydrogenase/reductase (SDR) superfamily. It is an NADPH-dependent oxidoreductase anchored in the endoplasmic reticulum membrane that catalyses the final step of testosterone biosynthesis: reduction of the 17-keto group of androstenedione (androst-4-ene-3,17-dione) to the 17beta-hydroxyl, yielding testosterone. It reduces additional 17-ketosteroids (e.g. dehydroepiandrosterone, epiandrosterone, androstanedione, and 11-oxygenated C19 steroids), and can also interconvert estrone and 17beta-estradiol. Expressed predominantly in the testis, where it supplies the androgen needed for masculinization. Loss-of-function mutations cause an autosomal-recessive 46,XY disorder of sex development (17beta-HSD3 deficiency; male pseudohermaphroditism with gynecomastia), in which affected 46,XY individuals are undervirilized and show a characteristically decreased plasma testosterone-to-androstenedione ratio.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005783
endoplasmic reticulum
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetic (IBA) localization to the endoplasmic reticulum. HSD17B3 is an ER-membrane-anchored SDR enzyme; direct human experimental data and Reactome agree, so this is accurate.
Reason: Consistent with the experimentally determined ER localization of the human enzyme and its N-terminal membrane anchor. A more specific ER membrane term exists (see GO:0005789) but the parent ER term is correct.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
SUBCELLULAR LOCATION: Endoplasmic reticulum
|
|
GO:0047045
testosterone dehydrogenase (NADP+) activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetic (IBA) assignment of the core catalytic function: NADP-dependent testosterone 17beta-dehydrogenase activity (testosterone + NADP+ <-> androstenedione + NADPH), the physiological direction being reduction of androstenedione to testosterone.
Reason: This is the defining molecular function of HSD17B3, supported by direct human enzymology. The IBA agrees with IDA and TAS annotations of the same term.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH
PMID:8075637
uses NADPh as a cofactor, and
|
|
GO:0006694
steroid biosynthetic process
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Phylogenetic (IBA) assignment to steroid biosynthesis. HSD17B3 acts in androgen/testosterone biosynthesis, which is a steroid biosynthetic process.
Reason: Correct but general. The more specific androgen/testosterone biosynthetic process terms (GO:0006702, GO:0061370) better capture the role; this parent term is retained as accurate context.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
Hormone biosynthesis; testosterone biosynthesis.
|
|
GO:0004303
estradiol 17-beta-dehydrogenase [NAD(P)+] activity
|
IEA
GO_REF:0000120 |
KEEP AS NON CORE |
Summary: IEA (EC 1.1.1.62 / Rhea) mapping to estradiol 17-beta-dehydrogenase activity. HSD17B3 can catalyse the 17beta-estradiol <-> estrone interconversion, so the activity is real, but it is a minor/secondary activity, not the physiological role of this testicular androgenic enzyme.
Reason: The 17beta-estradiol + NADP+ = estrone + NADPH reaction (RHEA:24616, EC 1.1.1.62) is documented for the enzyme in UniProt, justifying the mapping, but the physiologically important, testis-relevant activity is testosterone dehydrogenase (androstenedione->testosterone). Retain as non-core.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
17beta-estradiol + NADP(+) = estrone + NADPH + H(+);
|
|
GO:0005783
endoplasmic reticulum
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA (UniProt SubCell / ARBA) localization to the endoplasmic reticulum, duplicating the IBA/IDA ER annotations. Correct.
Reason: Matches the experimentally determined ER localization of the human enzyme.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
SUBCELLULAR LOCATION: Endoplasmic reticulum
|
|
GO:0008610
lipid biosynthetic process
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: IEA (ARBA) mapping to lipid biosynthetic process. Steroids are technically lipids, so this is not strictly wrong, but it is far too general and uninformative for a testosterone-biosynthetic enzyme.
Reason: The specific role of HSD17B3 is in androgen/testosterone (steroid hormone) biosynthesis, already captured by GO:0006702 and GO:0061370. The generic lipid biosynthetic process term over-generalizes and adds no useful signal.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
Hormone biosynthesis; testosterone biosynthesis.
|
|
GO:0016614
oxidoreductase activity, acting on CH-OH group of donors
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: IEA (ARBA) mapping to the general oxidoreductase activity acting on CH-OH group of donors. HSD17B3 is a hydroxysteroid dehydrogenase (reduces 17-keto to 17beta-hydroxy using NADPH), so this parent term is correct.
Reason: Accurate but general parent of the specific 17beta-HSD / testosterone dehydrogenase activity. Retained as correct context.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
Uses NADPH
|
|
GO:0047045
testosterone dehydrogenase (NADP+) activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA (EC 1.1.1.64 / Rhea RHEA:14981) mapping to testosterone dehydrogenase (NADP+) activity, duplicating the core IBA/IDA/TAS molecular-function annotation.
Reason: Core catalytic function, independently supported by direct human enzymology and by the EC/Rhea mapping (testosterone + NADP+ = androstenedione + NADPH).
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH
|
|
GO:0072582
17-beta-hydroxysteroid dehydrogenase (NADP+) activity
|
IEA
GO_REF:0000116 |
ACCEPT |
Summary: IEA (Rhea) mapping to 17-beta-hydroxysteroid dehydrogenase (NADP+) activity, the general reaction (a 17beta-hydroxy steroid + NADP+ = a 17-oxo steroid + NADPH). This is the family-level activity that HSD17B3 carries out on multiple 17-ketosteroid substrates.
Reason: Accurately describes the enzyme's broad 17beta-HSD activity across several 17-oxosteroid substrates (androstenedione, DHEA, androstanedione, 11-oxygenated C19 steroids), reducing them at C-17 using NADPH. Complements the more specific testosterone dehydrogenase term.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
Favors the reduction of
|
|
GO:0005515
protein binding
|
IPI
PMID:28514442 Architecture of the human interactome defines protein commun... |
MARK AS OVER ANNOTATED |
Summary: IPI protein-binding annotation from a high-throughput affinity-purification mass-spectrometry human interactome map (BioPlex), with interactor NCS1 (UniProtKB:P62166).
Reason: Bare "protein binding" from a proteome-scale interactome screen is uninformative about the molecular function of HSD17B3 and does not represent a characterized, biologically interpreted interaction. Per curation guidelines, such generic protein-binding terms should not be treated as core function.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
P37058; P62166: NCS1;
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
MARK AS OVER ANNOTATED |
Summary: IPI protein-binding annotation from a second proteome-scale AP-MS human interactome study (BioPlex 3.0), again with interactor NCS1 (UniProtKB:P62166).
Reason: As with the companion interactome dataset, this generic "protein binding" annotation from a high-throughput screen is uninformative for molecular function and is not core.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
P37058; P62166: NCS1;
|
|
GO:0006702
androgen biosynthetic process
|
TAS
Reactome:R-HSA-193048 |
ACCEPT |
Summary: TAS (Reactome, Androgen biosynthesis) assignment to androgen biosynthetic process. HSD17B3 catalyses the terminal androstenedione->testosterone step of androgen (testosterone) biosynthesis.
Reason: Testosterone is an androgen and HSD17B3 performs the final reductive step of its synthesis, so this is a correct and central biological-process annotation.
Supporting Evidence:
PMID:8075637
Defects in the conversion of androstenedione to testosterone in the fetal testes
|
|
GO:0061370
testosterone biosynthetic process
|
IEA
GO_REF:0000041 |
ACCEPT |
Summary: IEA (UniPathway UPA00367) assignment to testosterone biosynthetic process, the most specific biological process for this enzyme's role.
Reason: HSD17B3 catalyses the final, committed step producing testosterone; UniProt records the pathway "Hormone biosynthesis; testosterone biosynthesis". This is the most precise BP term and represents a core function.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
Hormone biosynthesis; testosterone biosynthesis.
|
|
GO:0047045
testosterone dehydrogenase (NADP+) activity
|
TAS
Reactome:R-HSA-193064 |
ACCEPT |
Summary: TAS (Reactome, HSD17B3-like proteins reduce ANDST to TEST) assignment of testosterone dehydrogenase (NADP+) activity, duplicating the core molecular function.
Reason: Core catalytic function; consistent with the IBA/IDA/IEA annotations of the same term and with the reduction of androstenedione to testosterone.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH
|
|
GO:0005783
endoplasmic reticulum
|
IDA
PMID:26545797 Biochemical analyses and molecular modeling explain the func... |
ACCEPT |
Summary: IDA localization to the endoplasmic reticulum. Engeli et al. expressed wild-type 17beta-HSD3 (and the G133R mutant) in HEK-293 cells and assessed intracellular localization; both showed comparable ER localization.
Reason: Direct experimental evidence for ER localization of the human enzyme in a cellular expression system, consistent with its membrane anchor.
Supporting Evidence:
PMID:26545797
showed comparable expression levels and intracellular localization.
|
|
GO:0047045
testosterone dehydrogenase (NADP+) activity
|
IDA
PMID:26545797 Biochemical analyses and molecular modeling explain the func... |
ACCEPT |
Summary: IDA for testosterone dehydrogenase (NADP+) activity. Engeli et al. measured the conversion of androstenedione to testosterone by wild-type 17beta-HSD3 (nearly abolished in the disease mutant G133R), directly demonstrating the enzyme activity.
Reason: Direct assay of the enzyme's testosterone-producing 17beta-reductase activity in a human expression system; the defining core molecular function.
Supporting Evidence:
PMID:26545797
conversion of Δ4-androstene-3,17-dione (androstenedione) to testosterone was
|
|
GO:0005789
endoplasmic reticulum membrane
|
TAS
Reactome:R-HSA-193064 |
ACCEPT |
Summary: TAS (Reactome) localization to the endoplasmic reticulum membrane, the most precise cellular-component term. HSD17B3 has an N-terminal hydrophobic segment that anchors it in the ER membrane.
Reason: Most specific and accurate location for this membrane-anchored ER enzyme; preferred over the parent GO:0005783 term.
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
SUBCELLULAR LOCATION: Endoplasmic reticulum
|
|
GO:0030539
male genitalia development
|
TAS
PMID:8075637 Male pseudohermaphroditism caused by mutations of testicular... |
KEEP AS NON CORE |
Summary: TAS (Geissler et al. 1994) involvement in male genitalia development. Deficiency of 17beta-HSD3 impairs fetal testicular testosterone synthesis, giving 46,XY individuals female external genitalia (male pseudohermaphroditism).
Reason: This is a real but downstream physiological/developmental consequence of the enzyme's biochemical activity (testosterone drives male sexual differentiation), not the molecular/biosynthetic core function. Retained as non-core to preserve the well-established disease/developmental link.
Supporting Evidence:
PMID:8075637
Defects in the conversion of androstenedione to testosterone in the fetal testes
file:human/HSD17B3/HSD17B3-uniprot.txt
inadequate testicular synthesis of
|
|
GO:0043231
intracellular membrane-bounded organelle
|
TAS
PMID:8075637 Male pseudohermaphroditism caused by mutations of testicular... |
MODIFY |
Summary: TAS (Geissler et al. 1994) localization to an intracellular membrane-bounded organelle. The original paper described the enzyme as microsomal (ER); the annotation is correct but far more general than the known ER localization.
Reason: The enzyme is specifically an ER (microsomal) membrane protein, established by direct experimental evidence. This generic organelle term should be replaced with the specific endoplasmic reticulum term.
Proposed replacements:
endoplasmic reticulum
Supporting Evidence:
file:human/HSD17B3/HSD17B3-uniprot.txt
SUBCELLULAR LOCATION: Endoplasmic reticulum
|
id: P37058
gene_symbol: HSD17B3
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
Testis-specific 17-beta-hydroxysteroid dehydrogenase type 3 (17beta-HSD3), a
member of the short-chain dehydrogenase/reductase (SDR) superfamily. It is an
NADPH-dependent oxidoreductase anchored in the endoplasmic reticulum membrane
that catalyses the final step of testosterone biosynthesis: reduction of the
17-keto group of androstenedione (androst-4-ene-3,17-dione) to the 17beta-hydroxyl,
yielding testosterone. It reduces additional 17-ketosteroids (e.g.
dehydroepiandrosterone, epiandrosterone, androstanedione, and 11-oxygenated C19
steroids), and can also interconvert estrone and 17beta-estradiol. Expressed
predominantly in the testis, where it supplies the androgen needed for
masculinization. Loss-of-function mutations cause an autosomal-recessive 46,XY
disorder of sex development (17beta-HSD3 deficiency; male pseudohermaphroditism
with gynecomastia), in which affected 46,XY individuals are undervirilized and
show a characteristically decreased plasma testosterone-to-androstenedione ratio.
alternative_products:
- name: '1'
id: P37058-1
- name: '2'
id: P37058-2
sequence_note: VSP_056640
existing_annotations:
- term:
id: GO:0005783
label: endoplasmic reticulum
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: >-
Phylogenetic (IBA) localization to the endoplasmic reticulum. HSD17B3 is an
ER-membrane-anchored SDR enzyme; direct human experimental data and Reactome
agree, so this is accurate.
action: ACCEPT
reason: >-
Consistent with the experimentally determined ER localization of the human
enzyme and its N-terminal membrane anchor. A more specific ER membrane term
exists (see GO:0005789) but the parent ER term is correct.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "SUBCELLULAR LOCATION: Endoplasmic reticulum"
- term:
id: GO:0047045
label: testosterone dehydrogenase (NADP+) activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: >-
Phylogenetic (IBA) assignment of the core catalytic function: NADP-dependent
testosterone 17beta-dehydrogenase activity (testosterone + NADP+ <->
androstenedione + NADPH), the physiological direction being reduction of
androstenedione to testosterone.
action: ACCEPT
reason: >-
This is the defining molecular function of HSD17B3, supported by direct human
enzymology. The IBA agrees with IDA and TAS annotations of the same term.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH"
- reference_id: PMID:8075637
supporting_text: "uses NADPh as a cofactor, and"
- term:
id: GO:0006694
label: steroid biosynthetic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: >-
Phylogenetic (IBA) assignment to steroid biosynthesis. HSD17B3 acts in
androgen/testosterone biosynthesis, which is a steroid biosynthetic process.
action: ACCEPT
reason: >-
Correct but general. The more specific androgen/testosterone biosynthetic
process terms (GO:0006702, GO:0061370) better capture the role; this parent
term is retained as accurate context.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "Hormone biosynthesis; testosterone biosynthesis."
- term:
id: GO:0004303
label: estradiol 17-beta-dehydrogenase [NAD(P)+] activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: >-
IEA (EC 1.1.1.62 / Rhea) mapping to estradiol 17-beta-dehydrogenase activity.
HSD17B3 can catalyse the 17beta-estradiol <-> estrone interconversion, so the
activity is real, but it is a minor/secondary activity, not the physiological
role of this testicular androgenic enzyme.
action: KEEP_AS_NON_CORE
reason: >-
The 17beta-estradiol + NADP+ = estrone + NADPH reaction (RHEA:24616, EC
1.1.1.62) is documented for the enzyme in UniProt, justifying the mapping, but
the physiologically important, testis-relevant activity is testosterone
dehydrogenase (androstenedione->testosterone). Retain as non-core.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "17beta-estradiol + NADP(+) = estrone + NADPH + H(+);"
- term:
id: GO:0005783
label: endoplasmic reticulum
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: located_in
review:
summary: >-
IEA (UniProt SubCell / ARBA) localization to the endoplasmic reticulum,
duplicating the IBA/IDA ER annotations. Correct.
action: ACCEPT
reason: >-
Matches the experimentally determined ER localization of the human enzyme.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "SUBCELLULAR LOCATION: Endoplasmic reticulum"
- term:
id: GO:0008610
label: lipid biosynthetic process
evidence_type: IEA
original_reference_id: GO_REF:0000117
qualifier: involved_in
review:
summary: >-
IEA (ARBA) mapping to lipid biosynthetic process. Steroids are technically
lipids, so this is not strictly wrong, but it is far too general and
uninformative for a testosterone-biosynthetic enzyme.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The specific role of HSD17B3 is in androgen/testosterone (steroid hormone)
biosynthesis, already captured by GO:0006702 and GO:0061370. The generic
lipid biosynthetic process term over-generalizes and adds no useful signal.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "Hormone biosynthesis; testosterone biosynthesis."
- term:
id: GO:0016614
label: oxidoreductase activity, acting on CH-OH group of donors
evidence_type: IEA
original_reference_id: GO_REF:0000117
qualifier: enables
review:
summary: >-
IEA (ARBA) mapping to the general oxidoreductase activity acting on CH-OH
group of donors. HSD17B3 is a hydroxysteroid dehydrogenase (reduces 17-keto
to 17beta-hydroxy using NADPH), so this parent term is correct.
action: ACCEPT
reason: >-
Accurate but general parent of the specific 17beta-HSD / testosterone
dehydrogenase activity. Retained as correct context.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "Uses NADPH"
- term:
id: GO:0047045
label: testosterone dehydrogenase (NADP+) activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: >-
IEA (EC 1.1.1.64 / Rhea RHEA:14981) mapping to testosterone dehydrogenase
(NADP+) activity, duplicating the core IBA/IDA/TAS molecular-function
annotation.
action: ACCEPT
reason: >-
Core catalytic function, independently supported by direct human enzymology
and by the EC/Rhea mapping (testosterone + NADP+ = androstenedione + NADPH).
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH"
- term:
id: GO:0072582
label: 17-beta-hydroxysteroid dehydrogenase (NADP+) activity
evidence_type: IEA
original_reference_id: GO_REF:0000116
qualifier: enables
review:
summary: >-
IEA (Rhea) mapping to 17-beta-hydroxysteroid dehydrogenase (NADP+) activity,
the general reaction (a 17beta-hydroxy steroid + NADP+ = a 17-oxo steroid +
NADPH). This is the family-level activity that HSD17B3 carries out on multiple
17-ketosteroid substrates.
action: ACCEPT
reason: >-
Accurately describes the enzyme's broad 17beta-HSD activity across several
17-oxosteroid substrates (androstenedione, DHEA, androstanedione, 11-oxygenated
C19 steroids), reducing them at C-17 using NADPH. Complements the more specific
testosterone dehydrogenase term.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "Favors the reduction of"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28514442
qualifier: enables
review:
summary: >-
IPI protein-binding annotation from a high-throughput affinity-purification
mass-spectrometry human interactome map (BioPlex), with interactor NCS1
(UniProtKB:P62166).
action: MARK_AS_OVER_ANNOTATED
reason: >-
Bare "protein binding" from a proteome-scale interactome screen is
uninformative about the molecular function of HSD17B3 and does not represent
a characterized, biologically interpreted interaction. Per curation guidelines,
such generic protein-binding terms should not be treated as core function.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "P37058; P62166: NCS1;"
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
qualifier: enables
review:
summary: >-
IPI protein-binding annotation from a second proteome-scale AP-MS human
interactome study (BioPlex 3.0), again with interactor NCS1 (UniProtKB:P62166).
action: MARK_AS_OVER_ANNOTATED
reason: >-
As with the companion interactome dataset, this generic "protein binding"
annotation from a high-throughput screen is uninformative for molecular
function and is not core.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "P37058; P62166: NCS1;"
- term:
id: GO:0006702
label: androgen biosynthetic process
evidence_type: TAS
original_reference_id: Reactome:R-HSA-193048
qualifier: involved_in
review:
summary: >-
TAS (Reactome, Androgen biosynthesis) assignment to androgen biosynthetic
process. HSD17B3 catalyses the terminal androstenedione->testosterone step
of androgen (testosterone) biosynthesis.
action: ACCEPT
reason: >-
Testosterone is an androgen and HSD17B3 performs the final reductive step of
its synthesis, so this is a correct and central biological-process annotation.
supported_by:
- reference_id: PMID:8075637
supporting_text: "Defects in the conversion of androstenedione to testosterone in the fetal testes"
- term:
id: GO:0061370
label: testosterone biosynthetic process
evidence_type: IEA
original_reference_id: GO_REF:0000041
qualifier: involved_in
review:
summary: >-
IEA (UniPathway UPA00367) assignment to testosterone biosynthetic process,
the most specific biological process for this enzyme's role.
action: ACCEPT
reason: >-
HSD17B3 catalyses the final, committed step producing testosterone; UniProt
records the pathway "Hormone biosynthesis; testosterone biosynthesis". This is
the most precise BP term and represents a core function.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "Hormone biosynthesis; testosterone biosynthesis."
- term:
id: GO:0047045
label: testosterone dehydrogenase (NADP+) activity
evidence_type: TAS
original_reference_id: Reactome:R-HSA-193064
qualifier: enables
review:
summary: >-
TAS (Reactome, HSD17B3-like proteins reduce ANDST to TEST) assignment of
testosterone dehydrogenase (NADP+) activity, duplicating the core molecular
function.
action: ACCEPT
reason: >-
Core catalytic function; consistent with the IBA/IDA/IEA annotations of the
same term and with the reduction of androstenedione to testosterone.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH"
- term:
id: GO:0005783
label: endoplasmic reticulum
evidence_type: IDA
original_reference_id: PMID:26545797
qualifier: located_in
review:
summary: >-
IDA localization to the endoplasmic reticulum. Engeli et al. expressed
wild-type 17beta-HSD3 (and the G133R mutant) in HEK-293 cells and assessed
intracellular localization; both showed comparable ER localization.
action: ACCEPT
reason: >-
Direct experimental evidence for ER localization of the human enzyme in a
cellular expression system, consistent with its membrane anchor.
supported_by:
- reference_id: PMID:26545797
supporting_text: "showed comparable expression levels and intracellular localization."
- term:
id: GO:0047045
label: testosterone dehydrogenase (NADP+) activity
evidence_type: IDA
original_reference_id: PMID:26545797
qualifier: enables
review:
summary: >-
IDA for testosterone dehydrogenase (NADP+) activity. Engeli et al. measured
the conversion of androstenedione to testosterone by wild-type 17beta-HSD3
(nearly abolished in the disease mutant G133R), directly demonstrating the
enzyme activity.
action: ACCEPT
reason: >-
Direct assay of the enzyme's testosterone-producing 17beta-reductase activity
in a human expression system; the defining core molecular function.
supported_by:
- reference_id: PMID:26545797
supporting_text: "conversion of Δ4-androstene-3,17-dione (androstenedione) to testosterone was"
- term:
id: GO:0005789
label: endoplasmic reticulum membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-193064
qualifier: located_in
review:
summary: >-
TAS (Reactome) localization to the endoplasmic reticulum membrane, the most
precise cellular-component term. HSD17B3 has an N-terminal hydrophobic segment
that anchors it in the ER membrane.
action: ACCEPT
reason: >-
Most specific and accurate location for this membrane-anchored ER enzyme;
preferred over the parent GO:0005783 term.
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "SUBCELLULAR LOCATION: Endoplasmic reticulum"
- term:
id: GO:0030539
label: male genitalia development
evidence_type: TAS
original_reference_id: PMID:8075637
qualifier: involved_in
review:
summary: >-
TAS (Geissler et al. 1994) involvement in male genitalia development.
Deficiency of 17beta-HSD3 impairs fetal testicular testosterone synthesis,
giving 46,XY individuals female external genitalia (male pseudohermaphroditism).
action: KEEP_AS_NON_CORE
reason: >-
This is a real but downstream physiological/developmental consequence of the
enzyme's biochemical activity (testosterone drives male sexual differentiation),
not the molecular/biosynthetic core function. Retained as non-core to preserve
the well-established disease/developmental link.
supported_by:
- reference_id: PMID:8075637
supporting_text: "Defects in the conversion of androstenedione to testosterone in the fetal testes"
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "inadequate testicular synthesis of"
- term:
id: GO:0043231
label: intracellular membrane-bounded organelle
evidence_type: TAS
original_reference_id: PMID:8075637
qualifier: located_in
review:
summary: >-
TAS (Geissler et al. 1994) localization to an intracellular membrane-bounded
organelle. The original paper described the enzyme as microsomal (ER); the
annotation is correct but far more general than the known ER localization.
action: MODIFY
reason: >-
The enzyme is specifically an ER (microsomal) membrane protein, established by
direct experimental evidence. This generic organelle term should be replaced
with the specific endoplasmic reticulum term.
proposed_replacement_terms:
- id: GO:0005783
label: endoplasmic reticulum
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "SUBCELLULAR LOCATION: Endoplasmic reticulum"
core_functions:
- description: >-
NADPH-dependent 17beta-hydroxysteroid (testosterone) dehydrogenase that
catalyses the final step of testosterone biosynthesis in the testis, reducing
the 17-keto group of androstenedione to give testosterone at the endoplasmic
reticulum membrane.
molecular_function:
id: GO:0047045
label: testosterone dehydrogenase (NADP+) activity
directly_involved_in:
- id: GO:0006702
label: androgen biosynthetic process
- id: GO:0061370
label: testosterone biosynthetic process
locations:
- id: GO:0005789
label: endoplasmic reticulum membrane
supported_by:
- reference_id: file:human/HSD17B3/HSD17B3-uniprot.txt
supporting_text: "testosterone + NADP(+) = androst-4-ene-3,17-dione + NADPH"
- reference_id: PMID:26545797
supporting_text: "conversion of Δ4-androstene-3,17-dione (androstenedione) to testosterone was"
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000041
title: Gene Ontology annotation based on UniPathway vocabulary mapping
findings: []
- id: GO_REF:0000116
title: Automatic Gene Ontology annotation based on Rhea mapping
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: file:human/HSD17B3/HSD17B3-uniprot.txt
title: UniProtKB entry P37058 (DHB3_HUMAN), 17-beta-hydroxysteroid dehydrogenase type 3
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: >-
Curated UniProt record; source for catalytic activity (RHEA:14981/EC 1.1.1.64
testosterone/androstenedione; RHEA:24616/EC 1.1.1.62 estradiol/estrone),
NADPH cofactor use, ER subcellular location, testis tissue specificity, and
the 46,XY DSD disease association.
- id: PMID:26545797
title: Biochemical analyses and molecular modeling explain the functional loss of
17β-hydroxysteroid dehydrogenase 3 mutant G133R in three Tunisian patients with
46, XY Disorders of Sex Development.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: >-
Abstract-only in cache. Directly measures wild-type 17beta-HSD3 androstenedione->
testosterone conversion and ER localization in HEK-293 cells; basis for the IDA
MF and ER-localization annotations.
- id: PMID:28514442
title: Architecture of the human interactome defines protein communities and disease
networks.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: >-
High-throughput AP-MS interactome (BioPlex). Source of a generic IPI
protein-binding annotation (interactor NCS1/P62166); uninformative for
molecular function.
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human
interactome.
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: >-
High-throughput AP-MS interactome (BioPlex 3.0). Source of a second generic
IPI protein-binding annotation (interactor NCS1/P62166); uninformative for
molecular function.
- id: PMID:8075637
title: Male pseudohermaphroditism caused by mutations of testicular 17 beta-hydroxysteroid
dehydrogenase 3.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: >-
Abstract-only in cache. Landmark paper identifying HSD17B3, its testis-predominant
expression, NADPH cofactor use, and disease-causing mutations; basis for the MF,
testis tissue, disease, and male-genitalia-development annotations.
- id: Reactome:R-HSA-193048
title: Androgen biosynthesis
findings: []
- id: Reactome:R-HSA-193064
title: HSD17B3-like proteins reducde ANDST to TEST
findings: []