IL-10 (Interleukin-10, also known as Cytokine Synthesis Inhibitory Factor/CSIF) is the prototypical anti-inflammatory cytokine and founding member of the IL-10 family. It is a secreted homodimeric four-helix-bundle cytokine (~36 kDa dimer) that signals through a heterotetrameric receptor complex comprising two IL-10RA (ligand-binding) and two IL-10RB (signal-transducing) chains. Receptor engagement activates JAK1 (via IL-10RA) and TYK2 (via IL-10RB), leading to STAT3 phosphorylation, dimerization, nuclear translocation, and transcription of anti-inflammatory target genes (e.g., SOCS3, IL1RN). IL-10 is produced by multiple immune cell types including monocytes/macrophages, dendritic cells, T cell subsets (Th1, Th2, Treg), B cells, and NK cells. Its principal function is to suppress inflammatory responses by inhibiting pro-inflammatory cytokine production (TNF, IL-1, IL-6, IL-8, IL-12) in monocytes/macrophages, downregulating MHC class II expression and co-stimulatory molecules, and limiting T cell activation. IL-10 also has immunostimulatory effects on B cells (promoting proliferation, differentiation, and immunoglobulin production) and CD8+ T cells in certain contexts. Loss-of-function mutations in IL10 or IL10R cause very-early-onset inflammatory bowel disease (VEO-IBD), establishing IL-10 signaling as essential for intestinal immune homeostasis.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0006955
immune response
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for immune response. IL-10 is a central immunomodulatory cytokine involved in both innate and adaptive immune responses. The phylogenetic inference is well-supported by extensive literature on IL-10 across vertebrates.
Reason: IL-10 is definitively involved in immune response; this is one of its most fundamental roles. The IBA annotation is well-supported by conserved function across vertebrate IL-10 orthologs and extensive experimental evidence in human, mouse, rat, and zebrafish (PMID:1940799, deep research review).
|
|
GO:0005125
cytokine activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for cytokine activity. IL-10 is a prototypical cytokine that signals through the IL-10 receptor complex to activate JAK-STAT signaling.
Reason: Cytokine activity is the core molecular function of IL-10. It is the founding member of the IL-10 cytokine family and signals through its receptor complex to mediate its biological effects. This is well-established across all orthologs (PMID:1940799, UniProt P22301).
|
|
GO:0005615
extracellular space
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for extracellular space localization. IL-10 is a secreted cytokine that functions in the extracellular space by binding cell-surface receptors.
Reason: IL-10 contains a signal peptide (residues 1-18) and is secreted. It functions as a soluble homodimer in the extracellular space where it engages the IL-10R complex on target cells (UniProt P22301, deep research review).
|
|
GO:0046427
positive regulation of receptor signaling pathway via JAK-STAT
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for positive regulation of JAK-STAT signaling. IL-10 signals through JAK1/TYK2 to activate STAT3 phosphorylation.
Reason: This is a core aspect of IL-10 signaling. Binding to IL-10RA/IL-10RB activates JAK1 and TYK2, leading to STAT3 phosphorylation, which is the canonical downstream signaling pathway (PMID:16982608, deep research review).
|
|
GO:0050728
negative regulation of inflammatory response
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for negative regulation of inflammatory response. IL-10 is the prototypical anti-inflammatory cytokine.
Reason: This is the single most characteristic function of IL-10. It suppresses pro-inflammatory cytokine production, downregulates MHC class II, and limits inflammatory responses. Conserved across vertebrate orthologs (PMID:1940799, PMID:10443688, deep research review).
|
|
GO:0140105
interleukin-10-mediated signaling pathway
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for IL-10-mediated signaling pathway. IL-10 is the ligand that initiates this pathway.
Reason: IL-10 is the defining ligand for the IL-10-mediated signaling pathway. This is essentially tautological for the IL-10 protein itself and well-supported by phylogenetic inference (deep research review).
|
|
GO:0005125
cytokine activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for cytokine activity, consistent with the IBA annotation and multiple IDA annotations for the same term.
Reason: Redundant with IBA and IDA annotations but correct. IL-10 is unambiguously a cytokine (UniProt P22301, PMID:1940799).
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for extracellular region. IL-10 is a secreted protein.
Reason: Broader than extracellular space (GO:0005615) but still correct. IL-10 is secreted and functions in the extracellular region (UniProt P22301).
|
|
GO:0005615
extracellular space
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for extracellular space, consistent with IBA annotation.
Reason: Redundant with IBA annotation but correct. IL-10 is a secreted cytokine found in extracellular space (UniProt P22301).
|
|
GO:0006955
immune response
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for immune response, consistent with IBA annotation.
Reason: Redundant with IBA annotation but correct. IL-10 is a key immune response cytokine (PMID:1940799).
|
|
GO:0005515
protein binding
|
IPI
PMID:11485736 Crystal structure of the IL-10/IL-10R1 complex reveals a sha... |
MODIFY |
Summary: IPI protein binding annotation based on interaction with IL-10RA (Q13651). PMID:11485736 likely describes IL-10/IL-10RA interaction studies.
Reason: The interaction between IL-10 and IL-10RA is physiologically critical and well-characterized, but "protein binding" is too vague. This should be annotated as interleukin-10 receptor binding (GO:0005141) which more precisely captures the functional nature of this interaction.
Proposed replacements:
interleukin-10 receptor binding
Supporting Evidence:
PMID:11485736
Interleukin 10 (IL-10) is a dimeric cytokine that plays a central role in suppressing inflammatory responses. These activities are dependent on the interaction of IL-10 with its high-affinity receptor (IL-10R1).
|
|
GO:0005515
protein binding
|
IPI
PMID:12513909 Comparison of interleukin-22 and interleukin-10 soluble rece... |
MODIFY |
Summary: IPI protein binding based on interaction with IL-10RB (Q08334) and IL-10RA (Q13651). PMID:12513909 compares IL-22 and IL-10 soluble receptor complexes.
Reason: IL-10 binds both IL-10RA and IL-10RB as part of its receptor complex. "Protein binding" is uninformative; should be interleukin-10 receptor binding (GO:0005141).
Proposed replacements:
interleukin-10 receptor binding
Supporting Evidence:
PMID:12513909
IL-22 and IL-10 require different ligand-specific receptor chains (IL-22R and IL-10R1) but share a second receptor chain (IL-10R2) to initiate cellular responses.
|
|
GO:0005515
protein binding
|
IPI
PMID:15837194 Same structure, different function crystal structure of the ... |
MODIFY |
Summary: IPI protein binding based on interaction with IL-10RA (Q13651).
Reason: Another IL-10/IL-10RA interaction. Should be annotated as interleukin-10 receptor binding (GO:0005141) for specificity.
Proposed replacements:
interleukin-10 receptor binding
Supporting Evidence:
PMID:15837194
These functional differences have been correlated with the approximately 1000-fold lower affinity of vIL-10, compared to hIL-10, for the IL-10R1 receptor chain.
|
|
GO:0005515
protein binding
|
IPI
PMID:20462497 Structure and mechanism of receptor sharing by the IL-10R2 c... |
MODIFY |
Summary: IPI protein binding from PMID:20462497, which describes the structure and mechanism of receptor sharing by IL-10R2 (IL-10RB) common chain. Interaction with Q08334 (IL-10RB) and Q13651 (IL-10RA).
Reason: This paper provides structural evidence for IL-10 binding its receptor chains. Should be annotated as interleukin-10 receptor binding (GO:0005141).
Proposed replacements:
interleukin-10 receptor binding
Supporting Evidence:
PMID:20462497
IL-10R2 is a shared cell surface receptor required for the activation of five class 2 cytokines (IL-10, IL-22, IL-26, IL-28, and IL-29) that play critical roles in host defense.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome |
REMOVE |
Summary: IPI protein binding from the HuRI (Human Reference Interactome) high-throughput yeast two-hybrid study (PMID:32296183). Interacting partners include O76003, P0DPK4, P25490, P60410, Q8IUG1, Q9BYQ7 -- several of which are keratin-associated proteins or other unlikely interaction partners for a secreted cytokine.
Reason: PMID:32296183 is a large-scale Y2H screen. The interacting partners detected (keratins, KRTAP proteins) are likely non-physiological false positives for IL-10, which is a secreted extracellular cytokine. These interactions lack biological plausibility and are not supported by any other evidence.
Supporting Evidence:
PMID:32296183
A reference map of the human binary protein interactome
|
|
GO:0005515
protein binding
|
IPI
PMID:16982608 Conformational changes mediate interleukin-10 receptor 2 (IL... |
MODIFY |
Summary: IPI protein binding with IL-10RA (Q13651) from PMID:16982608. This paper likely describes IL-10 structural biology and receptor interaction.
Reason: IL-10/IL-10RA interaction. Should be interleukin-10 receptor binding (GO:0005141).
Proposed replacements:
interleukin-10 receptor binding
Supporting Evidence:
PMID:16982608
Interleukin-10 receptor 2 (IL-10R2) is a critical component of the IL-10.IL-10R1.IL-10R2 complex which regulates IL-10-mediated immunomodulatory responses.
|
|
GO:0001818
negative regulation of cytokine production
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA transfer from rat Il10 (P29456). IL-10 is well-established as a negative regulator of cytokine production.
Reason: This is a core function of IL-10. It was originally named Cytokine Synthesis Inhibitory Factor (CSIF) precisely because it inhibits cytokine production by monocytes (PMID:1940799). The IEA transfer is well-supported.
|
|
GO:0001938
positive regulation of endothelial cell proliferation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from mouse Il10 (P18893) for positive regulation of endothelial cell proliferation. This is a non-immune pleiotropic effect.
Reason: While IL-10 has been reported to have effects on endothelial cells, this is a downstream pleiotropic effect rather than a core function. IL-10 is primarily an immune regulatory cytokine. The annotation represents an over-annotation of a secondary effect observed in specific experimental conditions.
|
|
GO:0005141
interleukin-10 receptor binding
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA transfer from rat Il10 (P29456). IL-10 receptor binding is the primary molecular function through which IL-10 initiates signaling.
Reason: IL-10 receptor binding is a core molecular function. IL-10 binds the IL-10RA/IL-10RB receptor complex to initiate downstream JAK-STAT signaling (UniProt P22301, deep research review).
|
|
GO:0008285
negative regulation of cell population proliferation
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 can inhibit proliferation of certain cell types including T cells and some other cell populations.
Reason: IL-10 can inhibit T cell proliferation (PMID:8499633) and has anti-proliferative effects on some cell types, but this is a broad term that does not capture the specific immune regulatory context. Acceptable as a non-core annotation.
Supporting Evidence:
PMID:8499633
Human interleukin-10 (IL-10) inhibits T-cell proliferation and cytokine production in the presence of monocytes.
|
|
GO:0009410
response to xenobiotic stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 expression may be induced by xenobiotic stimuli in rats, but this is not a core function for human IL-10.
Reason: Response to xenobiotic stimulus is a peripheral observation likely from rodent studies where IL-10 expression was measured after xenobiotic exposure. This does not represent a core function of IL-10 as a cytokine and is an over-annotation from ortholog transfer.
|
|
GO:0014823
response to activity
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 levels may change with physical activity in rats, but this is not a core function.
Reason: Response to activity (physical exercise) is a peripheral observation. IL-10 levels may change as part of general immune modulation during exercise, but this does not represent a core function of the cytokine itself.
|
|
GO:0014854
response to inactivity
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). Similar to response to activity, this is a peripheral observation.
Reason: Response to inactivity is a peripheral observation from rodent studies. Not a core function of IL-10 as an anti-inflammatory cytokine.
|
|
GO:0032496
response to lipopolysaccharide
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from rat Il10 (P29456). IL-10 is induced by LPS and also modulates the response to LPS.
Reason: IL-10 is both induced by LPS stimulation and acts to suppress LPS-induced inflammatory responses. This is a well-established aspect of IL-10 biology (PMID:14971032, PMID:10443688), though it represents a stimulus-response context rather than core function per se.
|
|
GO:0032720
negative regulation of tumor necrosis factor production
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for negative regulation of TNF production. IL-10 is a potent suppressor of TNF production by monocytes/macrophages.
Reason: Suppression of TNF production was one of the earliest identified functions of IL-10 (PMID:1940799) and is a core anti-inflammatory activity. The TAS annotation from PMID:19262501 also supports this. This IEA annotation is correct.
|
|
GO:0032868
response to insulin
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 levels may be affected by insulin in metabolic contexts.
Reason: Response to insulin is a peripheral metabolic observation from rodent studies. While there are links between IL-10 and metabolic regulation, this is not a core function of IL-10 as an immune cytokine.
|
|
GO:0034115
negative regulation of heterotypic cell-cell adhesion
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 can downregulate adhesion molecules such as ICAM-1 on monocytes.
Reason: IL-10 downregulates ICAM-1 and other adhesion molecules on monocytes (PMID:7512027 per UniProt), which affects cell-cell adhesion. This is a downstream consequence of IL-10's anti-inflammatory program rather than a core function, but it is a real effect.
|
|
GO:0034465
response to carbon monoxide
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 expression may be induced by carbon monoxide in rat models.
Reason: Response to carbon monoxide is a highly peripheral observation from rodent studies. This is not a core function of IL-10 and represents an over-annotation via ortholog transfer.
|
|
GO:0043032
positive regulation of macrophage activation
|
IEA
GO_REF:0000107 |
UNDECIDED |
Summary: IEA transfer from rat Il10 (P29456). This seems contradictory since IL-10 is primarily known to suppress macrophage activation, not promote it.
Reason: IL-10 is primarily known as an inhibitor of macrophage activation (suppressing pro-inflammatory cytokine production and MHC class II expression). While IL-10 can have some activating effects on macrophages (e.g., promoting alternative/M2 activation), the annotation of "positive regulation of macrophage activation" without qualification is potentially misleading. The underlying rodent evidence is not accessible to verify.
|
|
GO:0043066
negative regulation of apoptotic process
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from rat Il10 (P29456). IL-10 can inhibit apoptosis in certain cell types.
Reason: IL-10 has been shown to inhibit apoptosis in T cells starved of IL-2 (PMID:8312229) and can promote survival of certain immune cell types. This is a real but non-core effect of IL-10 signaling.
Supporting Evidence:
PMID:8312229
IL-10 inhibits apoptotic cell death in human T cells starved of IL-2.
|
|
GO:0043524
negative regulation of neuron apoptotic process
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 has been reported to have neuroprotective effects in certain rodent models.
Reason: Neuroprotective effects of IL-10 have been observed in rodent models of neuroinflammation, but this is a highly context-dependent downstream effect rather than a core function of this immune cytokine. Over-annotation via ortholog transfer.
|
|
GO:0045019
negative regulation of nitric oxide biosynthetic process
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from rat Il10 (P29456). IL-10 suppresses iNOS expression and NO production in activated macrophages.
Reason: IL-10 suppresses iNOS expression and nitric oxide production as part of its anti-inflammatory program in macrophages. This is a documented downstream effect of IL-10-mediated suppression of inflammatory gene expression, though not a core molecular function.
|
|
GO:0045787
positive regulation of cell cycle
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 can promote cell cycle progression in certain cell types.
Reason: While IL-10 can promote proliferation of certain cell types (e.g., B cells, mast cells), a generic "positive regulation of cell cycle" annotation is over-broad and does not capture the specific immune context. This is an over-annotation.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 signaling leads to STAT3-dependent transcriptional activation of anti-inflammatory genes.
Reason: IL-10 does activate transcription of specific genes via STAT3, but this is an extremely broad GO term. It is technically correct as a downstream effect of IL-10 signaling but not informative about IL-10's specific function.
|
|
GO:0050807
regulation of synapse organization
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 has been implicated in neuroimmune contexts.
Reason: Regulation of synapse organization is a very peripheral observation from rodent neuroimmune studies. This is not a core function of IL-10 as an immune cytokine and represents an over-annotation via ortholog transfer.
|
|
GO:0051384
response to glucocorticoid
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from rat Il10 (P29456). Glucocorticoids can regulate IL-10 expression.
Reason: IL-10 expression is known to be regulated by glucocorticoids (also supported by IDA annotation from PMID:10443688). While this describes regulation of IL-10 rather than a function of IL-10, the annotation is not wrong per se. Keep as non-core.
|
|
GO:0071392
cellular response to estradiol stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 levels may respond to estradiol in rodent studies.
Reason: Response to estradiol is a peripheral hormonal regulation observation from rodent studies. Not a core function of IL-10.
|
|
GO:0097421
liver regeneration
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from rat Il10 (P29456). IL-10 may play a role in liver regeneration in rodent models.
Reason: Liver regeneration is a highly tissue-specific and peripheral observation. While IL-10 may be expressed during liver regeneration, this is not a core function of this immune cytokine.
|
|
GO:1903034
regulation of response to wounding
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 modulates wound healing by regulating inflammatory responses.
Reason: IL-10 does modulate wound healing through its anti-inflammatory properties, which is an extension of its core immune regulatory function. Keep as non-core since it is a contextual application of the core function.
|
|
GO:1903377
negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from mouse Il10 (P18893). Highly specific neuroprotective annotation from rodent models.
Reason: This is an extremely specific neuroprotective annotation from mouse studies. IL-10 is not a neuron-specific factor; this represents a highly contextual observation from specific experimental paradigms that does not reflect a core function.
|
|
GO:1903672
positive regulation of sprouting angiogenesis
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 has been implicated in angiogenesis regulation.
Reason: Regulation of angiogenesis is a downstream pleiotropic effect rather than a core function of IL-10 as an immune cytokine. Over-annotation from ortholog transfer.
|
|
GO:1904706
negative regulation of vascular associated smooth muscle cell proliferation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA transfer from mouse Il10 (P18893). IL-10 may inhibit vascular smooth muscle cell proliferation.
Reason: Vascular smooth muscle cell proliferation regulation is a peripheral non-immune effect. Over-annotation from ortholog transfer.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:7749983 Cross-linking of OX40 ligand, a member of the TNF/NGF cytoki... |
KEEP AS NON CORE |
Summary: IDA annotation from PMID:7749983. This paper is about OX40L (TNFSF4), not about IL-10, so the reference is misattributed. However, IL-10 signaling through STAT3 does activate transcription of target genes, so the annotation itself is not wrong -- it is just a very broad term. Consistent with the IEA annotation for the same term which is marked KEEP_AS_NON_CORE.
Reason: The reference PMID:7749983 is misattributed (it describes OX40L cross-linking on murine B cells, not IL-10). Nevertheless, IL-10 does positively regulate transcription by RNA polymerase II via STAT3 signaling (PMID:16982608), so the annotation is biologically correct though overly broad. This is consistent with the IEA annotation for the same GO term. Kept as non-core because the term does not capture IL-10's specific function.
Supporting Evidence:
PMID:7749983
OX40 is a member of the TNF/NGF-receptor family expressed on activated T cells, whose ligand is found on activated T and B cells
|
|
GO:0140105
interleukin-10-mediated signaling pathway
|
IDA
PMID:7749983 Cross-linking of OX40 ligand, a member of the TNF/NGF cytoki... |
ACCEPT |
Summary: IDA annotation from PMID:7749983. The reference is misattributed (paper is about OX40L/TNFSF4, not IL-10). However, IL-10 is the defining ligand for the IL-10-mediated signaling pathway, so the annotation itself is correct and well-supported by IBA, IDA from PMID:10443688, and IDA from PMID:24994464.
Reason: IL-10 is the defining ligand for the IL-10-mediated signaling pathway; this is a core function that is essentially tautological. The reference PMID:7749983 is misattributed (it describes OX40L cross-linking on murine B cells), but the annotation is strongly supported by multiple other evidence lines including IBA (GO_REF:0000033), IDA (PMID:10443688), and IDA (PMID:24994464). Accepting the annotation despite the reference error because the biology is unambiguous.
Supporting Evidence:
PMID:7749983
OX40 is a member of the TNF/NGF-receptor family expressed on activated T cells, whose ligand is found on activated T and B cells
|
|
GO:0140105
interleukin-10-mediated signaling pathway
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: IDA annotation for IL-10-mediated signaling pathway from PMID:10443688. This publication is not available for review but is frequently cited for IL-10 annotations and is likely a primary study of IL-10 signaling.
Reason: IL-10 is the defining ligand for the IL-10-mediated signaling pathway. This PMID is cited for multiple IL-10 annotations and appears to be a key primary study. The annotation is consistent with the known biology of IL-10.
Supporting Evidence:
PMID:10443688
interleukin (IL)-10 (an anti-inflammatory cytokine) to differentially regulate the sensitivity of human monocytes/macrophages to glucocorticoids.
|
|
GO:0046427
positive regulation of receptor signaling pathway via JAK-STAT
|
IDA
PMID:16982608 Conformational changes mediate interleukin-10 receptor 2 (IL... |
ACCEPT |
Summary: IDA annotation for positive regulation of JAK-STAT signaling from PMID:16982608. This paper likely describes the structural basis of IL-10 signaling through its receptor complex to activate JAK1/TYK2/STAT3.
Reason: This is a core aspect of IL-10 function. IL-10 engagement of IL-10RA/IL-10RB activates JAK1 and TYK2, leading to STAT3 phosphorylation. PMID:16982608 is cited multiple times for IL-10 receptor and signaling annotations, suggesting it is a key structural/functional study (deep research review).
Supporting Evidence:
PMID:16982608
The ternary IL-10 signaling complex is assembled in a sequential order with the IL-10.IL-10R1 interaction occurring first followed by engagement of the IL-10R2 chain.
|
|
GO:0050864
regulation of B cell activation
|
IDA
PMID:35443184 Human IL-10-producing B cells have diverse states that are i... |
KEEP AS NON CORE |
Summary: IDA annotation for regulation of B cell activation from PMID:35443184. IL-10 has well-established effects on B cells.
Reason: IL-10 regulates B cell activation, which is a real but non-core function relative to its primary anti-inflammatory role. IL-10 was originally characterized as a B cell growth factor as well as a cytokine synthesis inhibitor (PMID:9184696, deep research review). Keep as non-core.
Supporting Evidence:
PMID:35443184
Regulatory B cells (Bregs) suppress immune responses through the secretion of interleukin-10 (IL-10). This immunomodulatory capacity holds therapeutic potential, yet a definitional immunophenotype for enumeration and prospective isolation of B cells capable of IL-10 production remains elusive.
|
|
GO:0005125
cytokine activity
|
IDA
PMID:24994464 Low IL10 serum levels as key factor for predicting the susta... |
ACCEPT |
Summary: IDA annotation for cytokine activity from PMID:24994464 (about IL10 serum levels in HCV patients). This confirms IL-10 functions as a circulating cytokine.
Reason: Cytokine activity is the core molecular function of IL-10. Multiple lines of evidence support this (PMID:1940799, PMID:24994464, IBA, IEA).
Supporting Evidence:
PMID:24994464
the levels of IL10 seem to influence response to IFNα/RIB therapy.
|
|
GO:0005615
extracellular space
|
IDA
PMID:24994464 Low IL10 serum levels as key factor for predicting the susta... |
ACCEPT |
Summary: IDA for extracellular space from PMID:24994464 (IL10 serum levels).
Reason: IL-10 is a secreted cytokine detected in serum/plasma. Extracellular space localization is well-established.
Supporting Evidence:
PMID:24994464
IL10 serum levels could be further explored as a useful algorithm for identify the CT/TT SVR patients.
|
|
GO:0140105
interleukin-10-mediated signaling pathway
|
IDA
PMID:24994464 Low IL10 serum levels as key factor for predicting the susta... |
ACCEPT |
Summary: IDA for IL-10-mediated signaling pathway from PMID:24994464.
Reason: IL-10 is the defining ligand for IL-10-mediated signaling. This is a core annotation well-supported by multiple evidence lines.
Supporting Evidence:
PMID:24994464
the levels of IL10 seem to influence response to IFNα/RIB therapy.
|
|
GO:0071222
cellular response to lipopolysaccharide
|
IDA
PMID:23071313 IL-10-induced microRNA-187 negatively regulates TNF-α, IL-6,... |
KEEP AS NON CORE |
Summary: IDA annotation for cellular response to LPS from PMID:23071313. IL-10 is both induced by and modulates the cellular response to LPS.
Reason: IL-10 modulates the cellular response to LPS by suppressing pro-inflammatory cytokine production. This is a well-established aspect of IL-10 biology but represents a specific stimulus-response context rather than core function.
Supporting Evidence:
PMID:23071313
IL-10 is a potent anti-inflammatory molecule that, in phagocytes, negatively targets cytokine expression at transcriptional and posttranscriptional levels.
|
|
GO:1902895
positive regulation of miRNA transcription
|
IDA
PMID:23071313 IL-10-induced microRNA-187 negatively regulates TNF-α, IL-6,... |
KEEP AS NON CORE |
Summary: IDA annotation for positive regulation of miRNA transcription from PMID:23071313. IL-10 has been shown to regulate miRNA expression as part of its signaling.
Reason: IL-10 signaling through STAT3 can regulate miRNA transcription as a downstream effect. This is a mechanistic detail of IL-10 signaling rather than a core function, but it is experimentally supported. Keep as non-core.
Supporting Evidence:
PMID:23071313
we identify miR-187 as an IL-10-dependent miRNA playing a role in IL-10-mediated suppression of TNF-α, IL-6, and the p40 subunit of IL-12 (IL-12p40) produced by primary human monocytes following activation of Toll-like receptor 4 (TLR4).
|
|
GO:0050728
negative regulation of inflammatory response
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: IDA annotation for negative regulation of inflammatory response from PMID:10443688. This is a core function of IL-10.
Reason: This is the single most important function of IL-10. The anti-inflammatory activity of IL-10 has been demonstrated in numerous experimental systems (PMID:1940799, PMID:10443688, deep research review).
Supporting Evidence:
PMID:10443688
IL-10 acts synergistically with glucocorticoids. This is accompanied by opposite glucocorticoid receptor changes, respectively opposing and favoring glucocorticoid actions.
|
|
GO:0001818
negative regulation of cytokine production
|
IDA
PMID:1940799 Interleukin 10(IL-10) inhibits cytokine synthesis by human m... |
ACCEPT |
Summary: IDA annotation for negative regulation of cytokine production from PMID:1940799. This is the seminal paper by de Waal Malefyt et al. (1991) establishing IL-10 as a cytokine synthesis inhibitor.
Reason: This is one of the most fundamental annotations for IL-10. PMID:1940799 demonstrated that IL-10 inhibits cytokine synthesis by human monocytes. IL-10 was originally named Cytokine Synthesis Inhibitory Factor (CSIF) based on this activity.
Supporting Evidence:
PMID:1940799
Interleukin 10(IL-10) inhibits cytokine synthesis by human monocytes: an autoregulatory role of IL-10 produced by monocytes.
|
|
GO:0010507
negative regulation of autophagy
|
IDA
PMID:26962683 IL10 inhibits starvation-induced autophagy in hypertrophic s... |
KEEP AS NON CORE |
Summary: IDA annotation for negative regulation of autophagy from PMID:26962683, which showed IL-10 inhibits starvation-induced autophagy in hypertrophic scar fibroblasts via STAT3/AKT-mTOR signaling crosstalk.
Reason: IL-10 has been shown to inhibit autophagy in hypertrophic scar fibroblasts via crosstalk between IL10-IL10R-STAT3 and IL10-AKT-mTOR pathways (PMID:26962683). This is a real but highly context-specific effect, not a core function of IL-10.
Supporting Evidence:
PMID:26962683
IL10 inhibits starvation-induced autophagy in hypertrophic scar fibroblasts via cross talk between the IL10-IL10R-STAT3 and IL10-AKT-mTOR pathways.
|
|
GO:0045347
negative regulation of MHC class II biosynthetic process
|
IDA
PMID:1940799 Interleukin 10(IL-10) inhibits cytokine synthesis by human m... |
ACCEPT |
Summary: IDA annotation for negative regulation of MHC class II biosynthetic process from PMID:1940799. IL-10 downregulates MHC class II expression on monocytes.
Reason: IL-10 downregulation of MHC class II expression on monocytes and macrophages is a core function directly related to its immune suppressive activity (PMID:1940799, PMID:8144879 per UniProt, deep research review).
Supporting Evidence:
PMID:1940799
Interleukin 10(IL-10) inhibits cytokine synthesis by human monocytes: an autoregulatory role of IL-10 produced by monocytes.
|
|
GO:0046983
protein dimerization activity
|
IDA
PMID:16982608 Conformational changes mediate interleukin-10 receptor 2 (IL... |
ACCEPT |
Summary: IDA annotation for protein dimerization activity from PMID:16982608. IL-10 functions as a homodimer.
Reason: IL-10 forms a non-covalent homodimer as its biologically active form. The dimer is stabilized by domain swapping and intrachain disulfide bonds. This is well-established from crystal structures and biochemical studies (UniProt P22301, PMID:8364028, deep research review).
Supporting Evidence:
PMID:16982608
These studies highlight the importance of structure in regulating low affinity protein-protein interactions and IL-10 signal transduction.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IDA
PMID:16606666 B7-H4 expression identifies a novel suppressive macrophage p... |
KEEP AS NON CORE |
Summary: IDA annotation for positive regulation of transcription from PMID:16606666. IL-10 signaling through STAT3 activates transcription of target genes.
Reason: IL-10 does activate transcription via STAT3 signaling. This is technically correct but is a very broad term. The specific transcriptional effects (anti-inflammatory gene induction) are better captured by other annotations. Keep as non-core.
Supporting Evidence:
PMID:16606666
Interleukin (IL)-6 and IL-10 are found in high concentrations in the tumor microenvironment. These cytokines stimulate macrophage B7-H4 expression.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IMP
PMID:17875732 Relationship between B7-H4, regulatory T cells, and patient ... |
KEEP AS NON CORE |
Summary: IMP annotation for positive regulation of transcription from PMID:17875732. This paper showed that tumor Treg cells enable macrophages to produce IL-10 and IL-6, and that tumor macrophages stimulate B7-H4 expression in an autocrine manner through IL-10 and IL-6. IL-10 thus indirectly promotes transcription of B7-H4 in this tumor microenvironment context.
Reason: PMID:17875732 demonstrates that IL-10 (produced by Treg-stimulated macrophages) stimulates B7-H4 expression on macrophages in ovarian carcinoma, which constitutes positive regulation of transcription. This is consistent with IL-10's known ability to activate STAT3-dependent gene transcription and with the IDA annotation for the same term (GO:0045893) from PMID:16606666, which is also marked KEEP_AS_NON_CORE. The transcriptional regulation is a downstream consequence of IL-10 signaling rather than a core function.
Supporting Evidence:
PMID:17875732
Tumor Treg cells enabled macrophages to spontaneously produce interleukin (IL)-10 and IL-6. Tumor macrophages stimulated B7-H4 expression in an autocrine manner through IL-10 and IL-6.
|
|
GO:0007259
cell surface receptor signaling pathway via JAK-STAT
|
NAS
PMID:33737461 Structure-based decoupling of the pro- and anti-inflammatory... |
ACCEPT |
Summary: NAS annotation for JAK-STAT signaling from PMID:33737461 (ComplexPortal). IL-10 signals through its receptor complex to activate JAK-STAT signaling.
Reason: IL-10 signaling through JAK1/TYK2/STAT3 is a core pathway. This NAS annotation from ComplexPortal is consistent with the well-established signaling mechanism (deep research review).
Supporting Evidence:
PMID:33737461
We used a structure-based approach to deconvolute IL-10 pleiotropy by determining the structure of the IL-10 receptor (IL-10R) complex by cryo-electron microscopy at a resolution of 3.5 angstroms.
|
|
GO:0008284
positive regulation of cell population proliferation
|
NAS
PMID:31611251 Biology and therapeutic potential of interleukin-10. |
KEEP AS NON CORE |
Summary: NAS annotation for positive regulation of cell proliferation from PMID:31611251 (ComplexPortal).
Reason: IL-10 can promote proliferation of certain cell types, particularly B cells and mast cells. However, it also inhibits proliferation of other cell types (T cells). This is a context-dependent effect, keep as non-core.
Supporting Evidence:
PMID:31611251
IL-10 (Fiorentino et al., 1989; Moore et al., 1990) is the founding member of a family of cytokines that also includes IL-19, IL-20, IL-22, IL-24, IL-26, IL-28A, IL-28B, and IL-29
|
|
GO:0019221
cytokine-mediated signaling pathway
|
NAS
PMID:33737461 Structure-based decoupling of the pro- and anti-inflammatory... |
ACCEPT |
Summary: NAS annotation for cytokine-mediated signaling pathway from ComplexPortal.
Reason: IL-10 is a cytokine that mediates signaling through its receptor. This is a core annotation that is well-supported (deep research review).
Supporting Evidence:
PMID:33737461
Interleukin-10 (IL-10) is an immunoregulatory cytokine with both anti-inflammatory and immunostimulatory properties and is frequently dysregulated in disease.
|
|
GO:0042531
positive regulation of tyrosine phosphorylation of STAT protein
|
NAS
PMID:16982608 Conformational changes mediate interleukin-10 receptor 2 (IL... |
ACCEPT |
Summary: NAS annotation for positive regulation of STAT tyrosine phosphorylation from PMID:16982608.
Reason: IL-10 signaling leads to JAK1/TYK2-mediated tyrosine phosphorylation of STAT3, which is the canonical downstream signaling event. This is a core mechanistic annotation (PMID:16982608, deep research review).
Supporting Evidence:
PMID:16982608
The basic mechanistic features of the assembly process are likely shared by six additional class-2 cytokines (viral IL-10s, IL-22, IL-26, IL-28A, IL28B, and IL-29) to promote IL-10R2 binding to six additional receptor complexes.
|
|
GO:0050728
negative regulation of inflammatory response
|
NAS
PMID:31611251 Biology and therapeutic potential of interleukin-10. |
ACCEPT |
Summary: NAS annotation for negative regulation of inflammatory response from ComplexPortal.
Reason: Anti-inflammatory activity is the core function of IL-10. Multiple evidence codes support this annotation (IBA, IDA, NAS from multiple sources).
Supporting Evidence:
PMID:31611251
The cytokine IL-10 is a key anti-inflammatory mediator ensuring protection of a host from over-exuberant responses to pathogens and microbiota
|
|
GO:0050728
negative regulation of inflammatory response
|
NAS
PMID:21857966 WNT5A signaling contributes to Aβ-induced neuroinflammation ... |
ACCEPT |
Summary: NAS annotation for negative regulation of inflammatory response from PMID:21857966, which is about WNT5A signaling and neuroinflammation.
Reason: While PMID:21857966 is primarily about WNT5A, IL-10 is mentioned as an anti-inflammatory cytokine in the context of neuroinflammation. The annotation itself is correct regardless of the reference context.
Supporting Evidence:
PMID:21857966
We found that IL-10, a prototypic anti-inflammatory cytokine, caused concentration-dependent rescue effects on Aβ toxicity
|
|
GO:0034115
negative regulation of heterotypic cell-cell adhesion
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: ISS annotation transferred from mouse Il10 (P18893) for negative regulation of heterotypic cell-cell adhesion. IL-10 downregulates adhesion molecules.
Reason: IL-10 downregulates ICAM-1 and other adhesion molecules on monocytes (PMID:7512027 per UniProt), which affects cell-cell adhesion. Transfer from mouse Il10 is reasonable. Keep as non-core.
|
|
GO:0034116
positive regulation of heterotypic cell-cell adhesion
|
ISS
GO_REF:0000024 |
REMOVE |
Summary: ISS annotation transferred from FasL/TNFSF6 (P06804) for positive regulation of heterotypic cell-cell adhesion. This is an inappropriate transfer.
Reason: This annotation was transferred from FasL (TNFSF6, P06804), which is a death ligand in the TNF superfamily. IL-10 is an anti-inflammatory cytokine in the IL-10 family. These proteins are functionally very different and the transfer is inappropriate. FasL mediates apoptotic and adhesion effects through completely different mechanisms than IL-10.
|
|
GO:0045930
negative regulation of mitotic cell cycle
|
ISS
GO_REF:0000024 |
REMOVE |
Summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate transfer.
Reason: Transfer from FasL (P06804) is inappropriate. FasL-mediated cell cycle arrest is related to its death receptor signaling, which has no mechanistic parallel in IL-10 biology.
|
|
GO:0072577
endothelial cell apoptotic process
|
ISS
GO_REF:0000024 |
REMOVE |
Summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate transfer.
Reason: Transfer from FasL (P06804) is inappropriate. FasL induces apoptosis through Fas receptor engagement, which is mechanistically unrelated to IL-10 function. IL-10 is generally anti-apoptotic, not pro-apoptotic.
|
|
GO:1904706
negative regulation of vascular associated smooth muscle cell proliferation
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: ISS annotation transferred from mouse Il10 (P18893). IL-10 may inhibit vascular smooth muscle cell proliferation.
Reason: Transfer from mouse Il10 (P18893) is reasonable in principle, but regulation of vascular smooth muscle cell proliferation is a peripheral non-immune effect. Over-annotation for this immune cytokine.
|
|
GO:1904707
positive regulation of vascular associated smooth muscle cell proliferation
|
ISS
GO_REF:0000024 |
REMOVE |
Summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate transfer.
Reason: Transfer from FasL (P06804) is inappropriate. The functional mechanisms of FasL and IL-10 are completely different, and the vascular smooth muscle proliferation effects of FasL cannot be transferred to IL-10.
|
|
GO:0008285
negative regulation of cell population proliferation
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: ISS annotation transferred from mouse Il10 (P18893). IL-10 can inhibit proliferation of certain cell types.
Reason: IL-10 can inhibit T cell proliferation (PMID:8499633) and has anti-proliferative effects on certain cell types. Transfer from mouse Il10 is reasonable. Keep as non-core.
|
|
GO:1903034
regulation of response to wounding
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: ISS annotation transferred from mouse Il10 (P18893). IL-10 modulates wound healing through anti-inflammatory effects.
Reason: IL-10 modulates wound healing responses through its anti-inflammatory properties. Transfer from mouse Il10 is reasonable. Keep as non-core.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-449803 |
ACCEPT |
Summary: TAS annotation for extracellular region from Reactome (IL10 dimer binds IL10RA:JAK1). IL-10 is a secreted protein.
Reason: IL-10 is secreted and localizes to the extracellular region where it binds its receptor complex. Reactome pathway annotation is consistent with known biology.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-449811 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (IL10 dimer:2xIL10RA1:JAK1 binds IL10RB:TYK2).
Reason: Same as above. IL-10 is extracellular. Reactome annotation consistent with known biology.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-449855 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (IL10 dimerizes).
Reason: IL-10 dimerizes in the extracellular space. Correct annotation.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6784006 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (STAT3 phosphorylation by JAK1/TYK2).
Reason: IL-10 is the extracellular ligand in this signaling event. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6784319 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (JAK1,TYK2 phosphorylation).
Reason: IL-10 is extracellular during this signaling step. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6784323 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (receptor complex binds STAT3).
Reason: IL-10 remains in the extracellular region bound to its receptor. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6784324 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (IL10RA phosphorylation).
Reason: IL-10 is extracellular in this signaling context. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6784791 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (STAT3 dissociation from receptor).
Reason: IL-10 is extracellular. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6789615 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (STAT3-upregulated extracellular protein expression).
Reason: IL-10 is extracellular. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-8981073 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (Expression of Interleukin-10).
Reason: IL-10 is expressed and secreted to the extracellular region. Correct.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-9664346 |
ACCEPT |
Summary: TAS for extracellular region from Reactome (IL10 gene produces IL10 protein).
Reason: IL-10 is a secreted extracellular protein. Correct.
|
|
GO:0005615
extracellular space
|
IDA
PMID:21323571 Pro/anti-inflammatory cytokines in the pathogenesis of prema... |
ACCEPT |
Summary: IDA for extracellular space from PMID:21323571, which studied cytokines in premature coronary artery disease patients.
Reason: IL-10 is detected in the extracellular space (serum/plasma) of patients. Consistent with IL-10 being a secreted cytokine.
Supporting Evidence:
PMID:21323571
Serum IL-10, IL-18, and TNF-alpha were measured using enzyme-linked immunosorbent assay
|
|
GO:0032692
negative regulation of interleukin-1 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS annotation for negative regulation of IL-1 production from PMID:19262501, about regulatory B cells in sheep Peyer's patches that secrete IL-10 and downregulate TLR9-induced cytokine responses.
Reason: IL-10 inhibition of IL-1 production is well-established as part of its core anti-inflammatory function. The original CSIF description (PMID:1940799) showed IL-10 inhibits multiple pro-inflammatory cytokines. PMID:19262501 provides additional evidence from Peyer's patch B cells.
Supporting Evidence:
PMID:19262501
A novel regulatory B-cell population in sheep Peyer's patches spontaneously secretes IL-10 and downregulates TLR9-induced IFNalpha responses.
|
|
GO:0032695
negative regulation of interleukin-12 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of IL-12 production from PMID:19262501.
Reason: IL-10 inhibition of IL-12 production by monocytes/macrophages and dendritic cells is one of its most important anti-inflammatory activities. IL-12 suppression is critical for limiting Th1 responses (PMID:19262501, deep research review).
Supporting Evidence:
PMID:19262501
Neutralization of the IL-10 or depletion of CD21(+) B cells resulted in a significant increase in CpG-induced IFNalpha-response in PPs, suggesting that IL-10 from B cells regulate innate responses in PPs.
|
|
GO:0032701
negative regulation of interleukin-18 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of IL-18 production from PMID:19262501.
Reason: IL-10 suppression of IL-18 production is consistent with its broad anti-inflammatory activity. IL-18 is a pro-inflammatory cytokine that IL-10 is known to suppress (PMID:19262501).
Supporting Evidence:
PMID:19262501
PP cells spontaneously secreted high levels of IL-10, and the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B cells.
|
|
GO:0032715
negative regulation of interleukin-6 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of IL-6 production from PMID:19262501.
Reason: IL-10 inhibition of IL-6 production is well-established and also supported by IDA annotation from PMID:10443688 (PMID:19262501).
Supporting Evidence:
PMID:19262501
PP cells spontaneously secreted high levels of IL-10, and the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B cells.
|
|
GO:0032717
negative regulation of interleukin-8 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of IL-8 production from PMID:19262501.
Reason: IL-10 inhibition of IL-8 (CXCL8) production is part of its broad suppression of pro-inflammatory mediators (PMID:19262501).
Supporting Evidence:
PMID:19262501
PP cells spontaneously secreted high levels of IL-10, and the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B cells.
|
|
GO:0032720
negative regulation of tumor necrosis factor production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of TNF production from PMID:19262501.
Reason: IL-10 suppression of TNF production is one of the earliest and best characterized functions of IL-10 (PMID:1940799, PMID:19262501).
Supporting Evidence:
PMID:19262501
A novel regulatory B-cell population in sheep Peyer's patches spontaneously secretes IL-10 and downregulates TLR9-induced IFNalpha responses.
|
|
GO:0071650
negative regulation of chemokine (C-C motif) ligand 5 production
|
TAS
PMID:19262501 A novel regulatory B-cell population in sheep Peyer's patche... |
ACCEPT |
Summary: TAS for negative regulation of CCL5 (RANTES) production from PMID:19262501.
Reason: IL-10 suppression of chemokine production including CCL5/RANTES is consistent with its broad anti-inflammatory activity (PMID:19262501).
Supporting Evidence:
PMID:19262501
These IL-10-secreting PP B cells may represent a novel subset of the recently proposed regulatory B cells (B(regs)) in the intestine.
|
|
GO:1903659
regulation of complement-dependent cytotoxicity
|
IMP
NOT
PMID:16034134 IL-4 and IL-13 induce protection of porcine endothelial cell... |
ACCEPT |
Summary: NOT annotation: IL-10 does NOT regulate complement-dependent cytotoxicity based on PMID:16034134.
Reason: This is a NOT annotation indicating IL-10 was tested and found not to regulate complement-dependent cytotoxicity. Negative results are informative and should be retained.
Supporting Evidence:
PMID:16034134
porcine EC incubated with IL-4 or IL-13, but not with IL-10 or IL-11, became protected from killing by complement and apoptosis induced by TNF-alpha plus cycloheximide.
|
|
GO:2000352
negative regulation of endothelial cell apoptotic process
|
IMP
NOT
PMID:16034134 IL-4 and IL-13 induce protection of porcine endothelial cell... |
ACCEPT |
Summary: NOT annotation: IL-10 does NOT negatively regulate endothelial cell apoptotic process based on PMID:16034134.
Reason: This is a NOT annotation indicating IL-10 was tested and found not to inhibit endothelial cell apoptosis. Negative results are informative.
Supporting Evidence:
PMID:16034134
porcine EC incubated with IL-4 or IL-13, but not with IL-10 or IL-11, became protected from killing by complement and apoptosis induced by TNF-alpha plus cycloheximide.
|
|
GO:0042130
negative regulation of T cell proliferation
|
NAS
PMID:14971032 Interleukin 10 regulates cell surface and soluble LIR-2 (CD8... |
ACCEPT |
Summary: NAS for negative regulation of T cell proliferation from PMID:14971032. IL-10 upregulates LIR-2 on DCs, causing T cell hyporesponsiveness.
Reason: IL-10 inhibition of T cell proliferation is well-documented. PMID:14971032 showed IL-10 regulates LIR-2 on dendritic cells resulting in T cell hyporesponsiveness. Also supported by PMID:8499633 which showed direct inhibition of T cell growth.
Supporting Evidence:
PMID:14971032
Interleukin 10 regulates cell surface and soluble LIR-2 (CD85d) expression on dendritic cells resulting in T cell hyporesponsiveness in vitro.
PMID:8499633
Human interleukin-10 (IL-10) inhibits T-cell proliferation and cytokine production in the presence of monocytes.
|
|
GO:0071222
cellular response to lipopolysaccharide
|
NAS
PMID:14971032 Interleukin 10 regulates cell surface and soluble LIR-2 (CD8... |
KEEP AS NON CORE |
Summary: NAS for cellular response to LPS from PMID:14971032. IL-10 modulates the response to LPS.
Reason: IL-10 modulates the cellular response to LPS stimulation by suppressing pro-inflammatory cytokine production. This is a stimulus-response context for IL-10 function. Keep as non-core.
Supporting Evidence:
PMID:14971032
LPS-stimulated, LIR-2-transfected DC inhibited the proliferation of T cells in autologous, as well as allogeneic culture systems in vitro.
|
|
GO:0060302
negative regulation of cytokine activity
|
IMP
PMID:9847016 Human interleukin 10 suppresses production of inflammatory m... |
ACCEPT |
Summary: IMP annotation for negative regulation of cytokine activity from PMID:9847016. IL-10 suppresses cytokine activity as part of its anti-inflammatory program.
Reason: IL-10 negatively regulates the activity of multiple pro-inflammatory cytokines. This is consistent with its core anti-inflammatory function.
Supporting Evidence:
PMID:9847016
Preincubation of LPS-stimulated peritoneal macrophages with rhuIL-10 caused significant (P<0.05) reduction in secretion of TNF, IL-6, and PGE2, in a dose-dependent manner.
|
|
GO:0002904
positive regulation of B cell apoptotic process
|
IDA
PMID:9184696 The apoptosis and proliferation of SAC-activated B cells by ... |
KEEP AS NON CORE |
Summary: IDA for positive regulation of B cell apoptotic process from PMID:9184696. This paper showed dual effects of IL-10 on SAC-activated B cells: promoting apoptosis at the initiation of activation and proliferation after pre-activation.
Reason: PMID:9184696 demonstrated that IL-10 has dual effects on B cells depending on activation state. IL-10 induces apoptosis in B cells at early stages of activation while promoting survival/proliferation of pre-activated B cells. The pro-apoptotic effect is context-dependent and not a core function.
Supporting Evidence:
PMID:9184696
The apoptosis and proliferation of SAC-activated B cells by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1 expression.
|
|
GO:0010468
regulation of gene expression
|
IDA
PMID:9184696 The apoptosis and proliferation of SAC-activated B cells by ... |
KEEP AS NON CORE |
Summary: IDA for regulation of gene expression from PMID:9184696. IL-10 treatment altered expression of Bcl-2, Bcl-xL, and Mcl-1 in B cells.
Reason: IL-10 does regulate gene expression through STAT3 signaling. This is a very broad term; the specific gene expression changes (Bcl-2 family members) are context-specific to the B cell activation study (PMID:9184696). Keep as non-core.
Supporting Evidence:
PMID:9184696
The apoptosis and proliferation of SAC-activated B cells by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1 expression.
|
|
GO:0030889
negative regulation of B cell proliferation
|
IDA
PMID:9184696 The apoptosis and proliferation of SAC-activated B cells by ... |
KEEP AS NON CORE |
Summary: IDA for negative regulation of B cell proliferation from PMID:9184696. Context-dependent effect of IL-10 on B cell proliferation.
Reason: PMID:9184696 showed that IL-10 can inhibit B cell proliferation depending on the activation state of the B cells. This is a real but context-dependent effect. Keep as non-core.
Supporting Evidence:
PMID:9184696
The apoptosis and proliferation of SAC-activated B cells by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1 expression.
|
|
GO:0051045
negative regulation of membrane protein ectodomain proteolysis
|
IDA
PMID:18383040 Interleukin-10 regulates TNF-alpha-converting enzyme (TACE/A... |
KEEP AS NON CORE |
Summary: IDA for negative regulation of membrane protein ectodomain proteolysis from PMID:18383040. IL-10 may inhibit shedding of certain membrane proteins.
Reason: PMID:18383040 showed IL-10 inhibits TACE/ADAM-17 activity on monocytes, which regulates TNF-alpha shedding. This is a downstream effect of IL-10 anti-inflammatory signaling. Keep as non-core.
Supporting Evidence:
PMID:18383040
In the presence of IL-10, TNF-alpha production and activation of surface TACE was significantly inhibited.
|
|
GO:0001819
positive regulation of cytokine production
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
KEEP AS NON CORE |
Summary: IDA for positive regulation of cytokine production from PMID:10443688. IL-10 can positively regulate production of certain cytokines while suppressing others.
Reason: While IL-10 is primarily known as an inhibitor of pro-inflammatory cytokines, it can promote production of certain cytokines (e.g., it can enhance IL-1RA production). This dual activity is consistent with IL-10 biology. Keep as non-core since the primary function is anti-inflammatory.
Supporting Evidence:
PMID:10443688
its effect on IL-10 secretion was biphasic, producing stimulation at lower, and inhibition at higher doses.
|
|
GO:0002719
negative regulation of cytokine production involved in immune response
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: IDA for negative regulation of cytokine production in immune response from PMID:10443688.
Reason: This is a core function of IL-10. It specifically captures the immune context of IL-10's cytokine-suppressive activity. More specific than the general negative regulation of cytokine production (GO:0001818) and directly relevant to IL-10's primary role.
Supporting Evidence:
PMID:10443688
Dexamethasone had different effects on LPS-induced TNFalpha and IL-10 secretion; whereas it suppressed TNFalpha in a dose-dependent fashion
|
|
GO:0005125
cytokine activity
|
NAS
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: NAS for cytokine activity from PMID:10443688. Redundant with IBA and IDA annotations.
Reason: Cytokine activity is the core molecular function. Multiple evidence codes support this annotation.
Supporting Evidence:
PMID:10443688
interleukin (IL)-10 (an anti-inflammatory cytokine)
|
|
GO:0005615
extracellular space
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: IDA for extracellular space from PMID:10443688.
Reason: IL-10 is secreted and found in the extracellular space. Well-established.
Supporting Evidence:
PMID:10443688
the sensitivity of these cells to glucocorticoids is altered by TNFalpha or IL-10 pretreatment
|
|
GO:0032715
negative regulation of interleukin-6 production
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
ACCEPT |
Summary: IDA for negative regulation of IL-6 production from PMID:10443688.
Reason: IL-10 suppression of IL-6 production is a well-characterized core anti-inflammatory activity. Also supported by TAS from PMID:19262501.
Supporting Evidence:
PMID:10443688
with IL-10 improved, the ability of dexamethasone to suppress IL-6 secretion in whole-blood cell cultures
|
|
GO:0051384
response to glucocorticoid
|
IDA
PMID:10443688 Tumor necrosis factor alpha decreases, and interleukin-10 in... |
KEEP AS NON CORE |
Summary: IDA for response to glucocorticoid from PMID:10443688. IL-10 expression is regulated by glucocorticoids.
Reason: Glucocorticoid regulation of IL-10 expression is documented but describes regulation of IL-10 rather than a core function of IL-10 itself. Keep as non-core.
Supporting Evidence:
PMID:10443688
IL-10 increased (P < 0.001), the concentration of dexamethasone binding sites in these cells
|
|
GO:0002237
response to molecule of bacterial origin
|
IDA
PMID:17449476 Eis (enhanced intracellular survival) protein of Mycobacteri... |
KEEP AS NON CORE |
Summary: IDA for response to molecule of bacterial origin from PMID:17449476. IL-10 is produced in response to bacterial products.
Reason: IL-10 production is induced by bacterial products as part of the immune response regulatory feedback loop. This describes a context for IL-10 induction rather than a core function. Keep as non-core.
Supporting Evidence:
PMID:17449476
there is increased production of interferon-gamma and interleukin-10, which indicates that immunity in response to Eis treatment is skewed away from a protective T(H)1 response
|
|
GO:0030595
leukocyte chemotaxis
|
TAS
PMID:9405662 Identification of functional domains on human interleukin 10 |
KEEP AS NON CORE |
Summary: TAS for leukocyte chemotaxis from PMID:9405662. This paper identified functional domains on human IL-10 (also referenced for protein sequence in UniProt).
Reason: IL-10 can modulate leukocyte chemotaxis through its effects on chemokine production and adhesion molecule expression. PMID:9405662 studied functional domains of IL-10 including chemotactic effects. Keep as non-core.
Supporting Evidence:
PMID:9405662
IL-10 significantly affects chemokine biology, because human IL-10 inhibits chemokine production and is a specific chemotactic factor for CD8+ T cells.
|
|
GO:0030183
B cell differentiation
|
NAS
PMID:8228801 Interleukin 10 (IL-10) upregulates functional high affinity ... |
KEEP AS NON CORE |
Summary: NAS for B cell differentiation from PMID:8228801. IL-10 promotes B cell differentiation.
Reason: IL-10 promotes B cell differentiation, particularly plasma cell differentiation. This is a well-established but non-core function of IL-10 (PMID:8228801, PMID:9184696).
Supporting Evidence:
PMID:8228801
Interleukin 10 (IL-10) has recently been shown to induce normal human B lymphocytes to proliferate and differentiate into immunoglobulin (Ig)-secreting cells.
|
|
GO:0042100
B cell proliferation
|
NAS
PMID:8228801 Interleukin 10 (IL-10) upregulates functional high affinity ... |
KEEP AS NON CORE |
Summary: NAS for B cell proliferation from PMID:8228801. IL-10 promotes B cell proliferation in certain contexts.
Reason: IL-10 was originally identified as a B cell growth factor as well as a cytokine synthesis inhibitor. It promotes B cell proliferation of pre-activated B cells (PMID:8228801, PMID:9184696). Keep as non-core.
Supporting Evidence:
PMID:8228801
IL-2 and IL-10 were found to synergize to induce the proliferation and differentiation of B-CLL cells.
|
|
GO:0045191
regulation of isotype switching
|
NAS
PMID:8228801 Interleukin 10 (IL-10) upregulates functional high affinity ... |
KEEP AS NON CORE |
Summary: NAS for regulation of isotype switching from PMID:8228801. IL-10 regulates immunoglobulin isotype switching in B cells.
Reason: IL-10 is known to regulate immunoglobulin isotype switching, promoting certain isotype classes. This is a real but non-core function related to IL-10's effects on B cells (PMID:8228801).
Supporting Evidence:
PMID:8228801
normal B cells which proliferated strongly and secreted large amounts of IgM, IgG, and IgA.
|
|
GO:0005141
interleukin-10 receptor binding
|
NAS
PMID:1847510 Isolation and expression of human cytokine synthesis inhibit... |
ACCEPT |
Summary: NAS for IL-10 receptor binding from PMID:1847510. This is the seminal paper on IL-10 cDNA cloning (Vieira et al., 1991).
Reason: IL-10 receptor binding is a core molecular function. PMID:1847510 is the original cloning paper for human IL-10 (Vieira et al., PNAS 1991) and established IL-10 as a ligand for its receptor.
Supporting Evidence:
PMID:1847510
cDNA clones encoding human IL-10 (hIL-10) were isolated from a tetanus toxin-specific human T-cell clone.
|
|
GO:0008083
growth factor activity
|
NAS
PMID:1371884 Interleukin 10 is a potent growth and differentiation factor... |
MODIFY |
Summary: NAS for growth factor activity from PMID:1371884. IL-10 was early on characterized as having growth factor-like activity on B cells.
Reason: While IL-10 does have proliferation-promoting effects on certain cell types (B cells, mast cells), it is more accurately classified as a cytokine than a growth factor. The term "cytokine activity" (GO:0005125) is more appropriate. Growth factor activity implies a more general proliferative function that does not capture IL-10's primary immunomodulatory role.
Proposed replacements:
cytokine activity
Supporting Evidence:
PMID:1371884
human and viral IL-10 stimulate DNA replication of B lymphocytes activated either via their antigen receptor or via their CD40 antigen.
|
|
GO:0030097
hemopoiesis
|
TAS
PMID:11244051 Interleukin-10 and the interleukin-10 receptor. |
KEEP AS NON CORE |
Summary: TAS for hemopoiesis from PMID:11244051. IL-10 has effects on hematopoietic cell development.
Reason: IL-10 has effects on hematopoietic cell development and differentiation, particularly on monocyte/macrophage and B cell lineages. This is a broad term but represents a real function. Keep as non-core.
Supporting Evidence:
PMID:11244051
multifunctional cytokine with diverse effects on most hemopoietic cell types.
|
|
GO:0032687
negative regulation of interferon-alpha production
|
NAS
PMID:9637497 Exogenous and endogenous IL-10 regulate IFN-alpha production... |
ACCEPT |
Summary: NAS for negative regulation of IFN-alpha production from PMID:9637497. This paper demonstrated that IL-10 reduces IFN-alpha-producing cells and bulk IFN-alpha in response to viral stimulation.
Reason: PMID:9637497 directly demonstrated that IL-10 suppresses IFN-alpha production by PBMCs in response to multiple viruses (HSV-1, Sendai virus, NDV, VSV). This is a specific and well-documented anti-inflammatory function of IL-10.
Supporting Evidence:
PMID:9637497
Human IL-10 (hIL-10) caused reductions in both the frequency of IFN-alpha-producing cells (IPC) and bulk IFN in response to herpes simplex virus type-1 (HSV-1), Sendai virus, Newcastle disease virus, and vesicular stomatitis virus.
|
|
GO:0042092
type 2 immune response
|
TAS
PMID:11244051 Interleukin-10 and the interleukin-10 receptor. |
KEEP AS NON CORE |
Summary: TAS for type 2 immune response from PMID:11244051. IL-10 is associated with Th2/type 2 immune responses.
Reason: IL-10 was originally identified as a Th2-derived cytokine and is associated with type 2 immune responses. However, IL-10 is now known to be produced by diverse immune cell types, not exclusively Th2 cells. The association with type 2 immunity is a non-core aspect of IL-10 biology.
Supporting Evidence:
PMID:11244051
IL-10 plays a key role in differentiation and function of a newly appreciated type of T cell, the T regulatory cell, which may figure prominently in control of immune responses and tolerance in vivo.
|
|
GO:0042130
negative regulation of T cell proliferation
|
NAS
PMID:8499633 Human interleukin-10 can directly inhibit T-cell growth |
ACCEPT |
Summary: NAS for negative regulation of T cell proliferation from PMID:8499633, which directly demonstrated that IL-10 inhibits T cell growth.
Reason: PMID:8499633 showed that IL-10 directly inhibits T cell growth (55.4% inhibition) when stimulated with immobilized anti-CD3, even in the absence of monocytes. This establishes a direct effect on T cells.
Supporting Evidence:
PMID:8499633
highly purified peripheral blood T cells containing less than 0.1% CD14+ cells and unresponsive to phytohemagglutinin (PHA), were growth-inhibited by IL-10 when stimulated with immobilized OKT3 monoclonal antibody (MoAb; 55.4% inhibition).
|
|
GO:0043066
negative regulation of apoptotic process
|
NAS
PMID:8312229 IL-10 inhibits apoptotic cell death in human T cells starved... |
KEEP AS NON CORE |
Summary: NAS for negative regulation of apoptotic process from PMID:8312229, which showed IL-10 inhibits apoptotic cell death in T cells starved of IL-2.
Reason: PMID:8312229 demonstrated that IL-10 inhibits apoptosis in IL-2-deprived T cells. This is a real but context-dependent anti-apoptotic effect of IL-10. Keep as non-core.
Supporting Evidence:
PMID:8312229
IL-10 inhibits apoptotic cell death in human T cells starved of IL-2.
|
|
GO:0045347
negative regulation of MHC class II biosynthetic process
|
TAS
PMID:11244051 Interleukin-10 and the interleukin-10 receptor. |
ACCEPT |
Summary: TAS for negative regulation of MHC class II biosynthesis from PMID:11244051.
Reason: IL-10 downregulation of MHC class II expression is a core function, also supported by IDA from PMID:1940799 (PMID:11244051, PMID:1940799).
Supporting Evidence:
PMID:11244051
IL-10 regulates growth and/or differentiation of B cells, NK cells, cytotoxic and helper T cells, mast cells, granulocytes, dendritic cells, keratinocytes, and endothelial cells.
|
|
GO:0005576
extracellular region
|
IPI
PMID:33737461 Structure-based decoupling of the pro- and anti-inflammatory... |
ACCEPT |
Summary: IPI for extracellular region from PMID:33737461 (ComplexPortal).
Reason: IL-10 is a secreted protein found in the extracellular region. Correct.
Supporting Evidence:
PMID:33737461
We used a structure-based approach to deconvolute IL-10 pleiotropy by determining the structure of the IL-10 receptor (IL-10R) complex by cryo-electron microscopy at a resolution of 3.5 angstroms.
|
|
GO:0045063
T-helper 1 cell differentiation
|
IDA
PMID:33737461 Structure-based decoupling of the pro- and anti-inflammatory... |
KEEP AS NON CORE |
Summary: IDA for T-helper 1 cell differentiation from PMID:33737461 (ComplexPortal). IL-10 can influence Th1/Th2 balance.
Reason: IL-10 can influence T helper cell differentiation, particularly by suppressing Th1 differentiation through inhibition of IL-12 and IFN-gamma production. The annotation says Th1 differentiation, not inhibition of it, so the qualifier from the GOA should be checked. Keep as non-core.
Supporting Evidence:
PMID:33737461
Some variants displayed myeloid-biased activity by suppressing macrophage activation without stimulating inflammatory CD8+ T cells, thereby uncoupling the major opposing functions of IL-10.
|
|
GO:0002639
positive regulation of immunoglobulin production
|
IGI
PMID:22962438 Complement receptor type 1 (CR1, CD35) is a potent inhibitor... |
KEEP AS NON CORE |
Summary: IGI for positive regulation of immunoglobulin production from PMID:22962438, with genetic interaction with IL-6 (P60568).
Reason: IL-10 promotes immunoglobulin production by B cells, often in synergy with other cytokines like IL-6. This is consistent with IL-10's B cell-stimulatory functions. Keep as non-core.
Supporting Evidence:
PMID:22962438
CR1 inhibits the differentiation of B cells to plasmablasts and their immunoglobulin production.
|
|
GO:1900100
positive regulation of plasma cell differentiation
|
IGI
PMID:22962438 Complement receptor type 1 (CR1, CD35) is a potent inhibitor... |
KEEP AS NON CORE |
Summary: IGI for positive regulation of plasma cell differentiation from PMID:22962438, with genetic interaction with IL-6 (P60568).
Reason: IL-10 promotes plasma cell differentiation, consistent with its B cell stimulatory functions. Keep as non-core.
Supporting Evidence:
PMID:22962438
CR1 inhibits the differentiation of B cells to plasmablasts and their immunoglobulin production.
|
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Comprehensive research report: Human IL10 (UniProt P22301)
Identity verification and core definition
- Target match: The gene symbol IL10 encodes human interleukin-10, a soluble, secreted immunomodulatory cytokine also known as cytokine synthesis inhibitory factor, produced by multiple leukocyte subsets; this aligns with the UniProt P22301 description and the IL-10 family identity (class-II, four-helix bundle cytokine family) (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023; https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (carlini2023themultifacetednature pages 2-3, salkeni2023interleukin10incancer pages 1-2).
- Molecular form: Biologically active IL-10 is a ~36 kDa homodimer stabilized by intrachain disulfide bonds; it signals via a heterotetrameric receptor, confirming the family/domain expectations for IL-10-like cytokines (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
Structure, receptor, and signaling
- Receptor architecture: IL-10 binds a heterotetrameric IL-10 receptor composed of two IL-10RA (IL-10R1; ligand-binding) and two IL-10RB (IL-10R2; shared signal-transducing) chains, predominantly on hematopoietic cells (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023; https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (carlini2023themultifacetednature pages 2-3, salkeni2023interleukin10incancer pages 1-2).
- Proximal signaling: Receptor subunits associate with JAK1 (IL-10RA) and TYK2 (IL-10RB). Ligand engagement activates JAK1/TYK2, leading to STAT3 phosphorylation, STAT3 dimerization, nuclear translocation, and transcription of anti-inflammatory genes (e.g., SOCS3, IL1RN) (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023; https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (salkeni2023interleukin10incancer pages 1-2, carlini2023themultifacetednature pages 2-3).
- Additional context: The canonical IL-10/STAT3 anti-inflammatory response is a central homeostatic module in macrophages and other myeloid cells; genomic studies map STAT3 target genes downstream of IL-10 and highlight pathway-level regulation (https://doi.org/10.1093/bfgp/elt028, Aug 2013) (hutchins2013theil10stat3mediatedantiinflammatory pages 1-1).
Expression, cellular sources, and localization
- Cellular sources: Initially described as Th2-derived, IL-10 is now known to be produced by diverse myeloid and lymphoid populations, including monocytes/macrophages, dendritic cells, CD4+ T-cell subsets, FOXP3+ Tregs, CD8+ T cells, NK cells, B cells, and neutrophils; certain tumors may also produce IL-10 (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023; https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (salkeni2023interleukin10incancer pages 1-2, carlini2023themultifacetednature pages 2-3).
- Localization: IL-10 is synthesized as a secreted cytokine and executes its function extracellularly by engaging cell-surface IL-10R on responsive target cells (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
Primary functions and pathway role
- Principal role: IL-10 is a master anti-inflammatory cytokine that limits duration/intensity of innate and adaptive responses. In myeloid cells it suppresses inflammatory gene programs downstream of TLRs and cytokines, largely via STAT3-dependent induction of negative regulators (e.g., SOCS3) and transcriptional reprogramming (https://doi.org/10.1093/bfgp/elt028, Aug 2013; https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (hutchins2013theil10stat3mediatedantiinflammatory pages 1-1, carlini2023themultifacetednature pages 2-3).
- Context-dependent immunostimulation: In tumors, IL-10 can directly activate resident or exhausted CD8+ T cells (including STAT1/STAT3 signaling), augment cytotoxicity and IFN-γ production, and synergize with checkpoint blockade—illustrating concentration- and context-dependent pleiotropy within the same receptor pathway (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (salkeni2023interleukin10incancer pages 1-2).
Recent developments and latest research (emphasis 2023–2024)
- Cancer immunotherapy translation: A 2023 expert review synthesizes bench-to-bedside progress with pegylated IL-10 (pegilodecakin), noting early signals (e.g., in RCC) but mixed outcomes overall, and motivates engineered IL-10 variants and tumor-targeted delivery to enhance antitumor CD8+ responses while limiting systemic immunosuppression (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (salkeni2023interleukin10incancer pages 1-2).
- Engineered IL-10 concepts: Recent preclinical work describes IL-10 fusions (e.g., Fc/antibody fusions, bispecifics) and variants with altered IL-10Rβ engagement to bias T-cell–stimulatory outputs and improve pharmacokinetics; these are entering early clinical testing, though clinical efficacy and toxicity need validation (source summarizes preclinical/early clinical directions; interpret with caution and cross-checking) (https://doi.org/10.3390/cancers17061012, Mar 2025) (elshemi2025il10directedcancerimmunotherapy pages 7-8, elshemi2025il10directedcancerimmunotherapy pages 12-14).
- Epigenetic and metabolic control of the IL-10 anti-inflammatory response: Systems-level analyses emphasize IL-10/STAT3 as a core anti-inflammatory transcriptional module in macrophages and outline genome-wide STAT3 targeting; newer work (beyond the core sources here) is actively dissecting epigenetic mechanisms and metabolic reprogramming that sharpen IL-10 responsiveness in myeloid cells (foundational summary) (https://doi.org/10.1093/bfgp/elt028, Aug 2013) (hutchins2013theil10stat3mediatedantiinflammatory pages 1-1).
- Infectious disease and COVID-19 context: Elevated circulating IL-10 correlates with severity and mortality in acute and post-acute SARS-CoV-2 infection, underscoring its use as a biomarker of dysregulated immunity (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
Current applications and clinical/real-world implementations
- Oncology: Pegilodecakin advanced to multiple trials; reviews describe its capacity to expand intratumoral CD8+ T cells and potential synergy with ICIs, with subsequent mixed clinical outcomes and toxicity concerns; next-generation, targeted IL-10 constructs are in early clinical development to improve the therapeutic index (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023; https://doi.org/10.3390/cancers17061012, Mar 2025) (salkeni2023interleukin10incancer pages 1-2, elshemi2025il10directedcancerimmunotherapy pages 12-14).
- Inborn errors of IL-10 signaling and VEO-IBD: Biallelic loss-of-function mutations in IL10 or IL10R cause severe, very early-onset enterocolitis; this human genetic evidence establishes the nonredundant role of IL-10 in intestinal immune homeostasis and informs definitive therapies (e.g., hematopoietic stem cell transplantation in IL-10R deficiency—not detailed quantitatively in the sources below) (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023; https://doi.org/10.3390/ijms26010121, Dec 2024) (carlini2023themultifacetednature pages 2-3, aebisher2024keyinterleukinsin pages 5-7).
Expert opinions and authoritative analyses
- Trends in Cancer (2023) frames IL-10 as a nuanced immunotherapy target whose dual myeloid-suppressive and CD8+-stimulatory activities can be exploited with engineered pharmacology and optimized delivery; it emphasizes STAT3-centric signaling via JAK1/TYK2 and context dependence (https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (salkeni2023interleukin10incancer pages 1-2, salkeni2023interleukin10incancer pages 9-10).
- Frontiers in Immunology (2023) provides a broad, clinically oriented overview of IL-10’s roles in homeostasis, cancer, and infection, detailing molecular identity, receptor composition, and downstream STAT3 signaling and highlighting IL-10 as a biomarker of hyperinflammation in COVID-19 (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
- Briefings in Functional Genomics (2013) provides foundational mechanistic analysis of the IL-10/STAT3 anti-inflammatory response in macrophages, mapping STAT3 genomic targets and co-factors; it remains a core conceptual reference for pathway-level understanding (https://doi.org/10.1093/bfgp/elt028, Aug 2013) (hutchins2013theil10stat3mediatedantiinflammatory pages 1-1).
Relevant statistics and quantitative data (from recent sources)
- Molecular weight and oligomeric state: Active IL-10 is a soluble ~36 kDa homodimer (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
- Receptor stoichiometry: Signaling requires a heterotetrameric assembly of 2× IL-10RA and 2× IL-10RB subunits with JAK1/TYK2 coupling, leading to STAT3 activation (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023; https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023) (carlini2023themultifacetednature pages 2-3, salkeni2023interleukin10incancer pages 1-2).
- Clinical correlation: Elevated IL-10 associates with worse outcomes in acute/post-acute COVID-19 cohorts (qualitative correlation emphasized in review; specific effect sizes vary by study and are not detailed in the cited summary) (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023) (carlini2023themultifacetednature pages 2-3).
Notes on evidence limits (to maintain rigor)
- Some 2025 preclinical/clinical engineering reports summarized above are secondary and flagged as lower-quality; they are included to illustrate directions but should be cross-validated with primary data as it becomes available (https://doi.org/10.3390/cancers17061012, Mar 2025) (elshemi2025il10directedcancerimmunotherapy pages 12-14, elshemi2025il10directedcancerimmunotherapy pages 7-8).
- Quantitative outcomes for hematopoietic stem cell transplantation in IL-10R deficiency, detailed epigenetic mechanisms of IL-10-mediated repression, and large randomized clinical trial metrics for pegilodecakin are not contained within the high-priority 2023–2024 sources retrieved here; these topics warrant targeted review of primary literature.
Conclusion
Human IL10 (P22301) encodes the canonical IL-10 cytokine, a secreted homodimer that signals through IL-10RA/IL-10RB to activate JAK1/TYK2 and STAT3, establishing a central anti-inflammatory program while exerting context-dependent immunostimulatory effects on CD8+ T cells. 2023 analyses emphasize IL-10’s duality and the need for engineered delivery and receptor engagement to harness anti-tumor benefits without systemic immunosuppression. Human genetics definitively place IL-10 signaling as essential for intestinal immune tolerance, explaining monogenic VEO-IBD when defective and motivating curative strategies. As translational efforts advance, precise control of IL-10’s pleiotropy via structure-guided engineering and targeted delivery remains the key frontier (https://doi.org/10.3389/fimmu.2023.1161067, Jun 2023; https://doi.org/10.1016/j.trecan.2023.05.003, Sep 2023; https://doi.org/10.1093/bfgp/elt028, Aug 2013) (carlini2023themultifacetednature pages 2-3, salkeni2023interleukin10incancer pages 1-2, hutchins2013theil10stat3mediatedantiinflammatory pages 1-1).
References
(carlini2023themultifacetednature pages 2-3): Valentina Carlini, Douglas M. Noonan, Eslam Abdalalem, Delia Goletti, Clementina Sansone, Luana Calabrone, and Adriana Albini. The multifaceted nature of il-10: regulation, role in immunological homeostasis and its relevance to cancer, covid-19 and post-covid conditions. Frontiers in Immunology, Jun 2023. URL: https://doi.org/10.3389/fimmu.2023.1161067, doi:10.3389/fimmu.2023.1161067. This article has 519 citations and is from a peer-reviewed journal.
(salkeni2023interleukin10incancer pages 1-2): Mohamad Adham Salkeni and Aung Naing. Interleukin-10 in cancer immunotherapy: from bench to bedside. Trends in Cancer, 9:716-725, Sep 2023. URL: https://doi.org/10.1016/j.trecan.2023.05.003, doi:10.1016/j.trecan.2023.05.003. This article has 95 citations and is from a peer-reviewed journal.
(hutchins2013theil10stat3mediatedantiinflammatory pages 1-1): A. Hutchins, Diego Diez, and Diego Miranda-Saavedra. The il-10/stat3-mediated anti-inflammatory response: recent developments and future challenges. Briefings in Functional Genomics, 12:489-498, Aug 2013. URL: https://doi.org/10.1093/bfgp/elt028, doi:10.1093/bfgp/elt028. This article has 531 citations and is from a peer-reviewed journal.
(elshemi2025il10directedcancerimmunotherapy pages 7-8): Adel G. El-Shemi, Afnan Alqurashi, Jihan Abdullah Abdulrahman, Hanin Dhaifallah Alzahrani, Khawlah Saad Almwalad, Hadeel Hisham Felfilan, Wahaj Saud Alomiri, Jana Ahmed Aloufi, Ghadeer Hassn Madkhali, Sarah Adel Maqliyah, Jood Bandar Alshahrani, Huda Taj Kamal, Sawsan Hazim Daghistani, Bassem Refaat, and Faisal Minshawi. Il-10-directed cancer immunotherapy: preclinical advances, clinical insights, and future perspectives. Cancers, 17:1012, Mar 2025. URL: https://doi.org/10.3390/cancers17061012, doi:10.3390/cancers17061012. This article has 10 citations and is from a poor quality or predatory journal.
(elshemi2025il10directedcancerimmunotherapy pages 12-14): Adel G. El-Shemi, Afnan Alqurashi, Jihan Abdullah Abdulrahman, Hanin Dhaifallah Alzahrani, Khawlah Saad Almwalad, Hadeel Hisham Felfilan, Wahaj Saud Alomiri, Jana Ahmed Aloufi, Ghadeer Hassn Madkhali, Sarah Adel Maqliyah, Jood Bandar Alshahrani, Huda Taj Kamal, Sawsan Hazim Daghistani, Bassem Refaat, and Faisal Minshawi. Il-10-directed cancer immunotherapy: preclinical advances, clinical insights, and future perspectives. Cancers, 17:1012, Mar 2025. URL: https://doi.org/10.3390/cancers17061012, doi:10.3390/cancers17061012. This article has 10 citations and is from a poor quality or predatory journal.
(aebisher2024keyinterleukinsin pages 5-7): David Aebisher, Dorota Bartusik-Aebisher, Agnieszka Przygórzewska, Piotr Oleś, Paweł Woźnicki, and Aleksandra Kawczyk-Krupka. Key interleukins in inflammatory bowel disease—a review of recent studies. International Journal of Molecular Sciences, 26:121, Dec 2024. URL: https://doi.org/10.3390/ijms26010121, doi:10.3390/ijms26010121. This article has 30 citations and is from a poor quality or predatory journal.
(salkeni2023interleukin10incancer pages 9-10): Mohamad Adham Salkeni and Aung Naing. Interleukin-10 in cancer immunotherapy: from bench to bedside. Trends in Cancer, 9:716-725, Sep 2023. URL: https://doi.org/10.1016/j.trecan.2023.05.003, doi:10.1016/j.trecan.2023.05.003. This article has 95 citations and is from a peer-reviewed journal.
id: P22301
gene_symbol: IL10
product_type: PROTEIN
status: DRAFT
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: IL-10 (Interleukin-10, also known as Cytokine Synthesis Inhibitory
Factor/CSIF) is the prototypical anti-inflammatory cytokine and founding
member of the IL-10 family. It is a secreted homodimeric four-helix-bundle
cytokine (~36 kDa dimer) that signals through a heterotetrameric receptor
complex comprising two IL-10RA (ligand-binding) and two IL-10RB
(signal-transducing) chains. Receptor engagement activates JAK1 (via IL-10RA)
and TYK2 (via IL-10RB), leading to STAT3 phosphorylation, dimerization,
nuclear translocation, and transcription of anti-inflammatory target genes
(e.g., SOCS3, IL1RN). IL-10 is produced by multiple immune cell types
including monocytes/macrophages, dendritic cells, T cell subsets (Th1, Th2,
Treg), B cells, and NK cells. Its principal function is to suppress
inflammatory responses by inhibiting pro-inflammatory cytokine production
(TNF, IL-1, IL-6, IL-8, IL-12) in monocytes/macrophages, downregulating MHC
class II expression and co-stimulatory molecules, and limiting T cell
activation. IL-10 also has immunostimulatory effects on B cells (promoting
proliferation, differentiation, and immunoglobulin production) and CD8+ T
cells in certain contexts. Loss-of-function mutations in IL10 or IL10R cause
very-early-onset inflammatory bowel disease (VEO-IBD), establishing IL-10
signaling as essential for intestinal immune homeostasis.
existing_annotations:
- term:
id: GO:0006955
label: immune response
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for immune response. IL-10 is a central
immunomodulatory cytokine involved in both innate and adaptive immune
responses. The phylogenetic inference is well-supported by extensive
literature on IL-10 across vertebrates.
action: ACCEPT
reason: IL-10 is definitively involved in immune response; this is one of
its most fundamental roles. The IBA annotation is well-supported by
conserved function across vertebrate IL-10 orthologs and extensive
experimental evidence in human, mouse, rat, and zebrafish (PMID:1940799,
deep research review).
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for cytokine activity. IL-10 is a prototypical
cytokine that signals through the IL-10 receptor complex to activate
JAK-STAT signaling.
action: ACCEPT
reason: Cytokine activity is the core molecular function of IL-10. It is the
founding member of the IL-10 cytokine family and signals through its
receptor complex to mediate its biological effects. This is
well-established across all orthologs (PMID:1940799, UniProt P22301).
- term:
id: GO:0005615
label: extracellular space
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for extracellular space localization. IL-10 is a
secreted cytokine that functions in the extracellular space by binding
cell-surface receptors.
action: ACCEPT
reason: IL-10 contains a signal peptide (residues 1-18) and is secreted. It
functions as a soluble homodimer in the extracellular space where it
engages the IL-10R complex on target cells (UniProt P22301, deep research
review).
- term:
id: GO:0046427
label: positive regulation of receptor signaling pathway via JAK-STAT
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for positive regulation of JAK-STAT signaling. IL-10
signals through JAK1/TYK2 to activate STAT3 phosphorylation.
action: ACCEPT
reason: This is a core aspect of IL-10 signaling. Binding to IL-10RA/IL-10RB
activates JAK1 and TYK2, leading to STAT3 phosphorylation, which is the
canonical downstream signaling pathway (PMID:16982608, deep research
review).
- term:
id: GO:0050728
label: negative regulation of inflammatory response
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for negative regulation of inflammatory response.
IL-10 is the prototypical anti-inflammatory cytokine.
action: ACCEPT
reason: This is the single most characteristic function of IL-10. It
suppresses pro-inflammatory cytokine production, downregulates MHC class
II, and limits inflammatory responses. Conserved across vertebrate
orthologs (PMID:1940799, PMID:10443688, deep research review).
- term:
id: GO:0140105
label: interleukin-10-mediated signaling pathway
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for IL-10-mediated signaling pathway. IL-10 is the
ligand that initiates this pathway.
action: ACCEPT
reason: IL-10 is the defining ligand for the IL-10-mediated signaling
pathway. This is essentially tautological for the IL-10 protein itself and
well-supported by phylogenetic inference (deep research review).
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for cytokine activity, consistent with the IBA
annotation and multiple IDA annotations for the same term.
action: ACCEPT
reason: Redundant with IBA and IDA annotations but correct. IL-10 is
unambiguously a cytokine (UniProt P22301, PMID:1940799).
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for extracellular region. IL-10 is a secreted
protein.
action: ACCEPT
reason: Broader than extracellular space (GO:0005615) but still correct.
IL-10 is secreted and functions in the extracellular region (UniProt
P22301).
- term:
id: GO:0005615
label: extracellular space
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for extracellular space, consistent with IBA
annotation.
action: ACCEPT
reason: Redundant with IBA annotation but correct. IL-10 is a secreted
cytokine found in extracellular space (UniProt P22301).
- term:
id: GO:0006955
label: immune response
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for immune response, consistent with IBA annotation.
action: ACCEPT
reason: Redundant with IBA annotation but correct. IL-10 is a key immune
response cytokine (PMID:1940799).
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11485736
review:
summary: IPI protein binding annotation based on interaction with IL-10RA
(Q13651). PMID:11485736 likely describes IL-10/IL-10RA interaction
studies.
action: MODIFY
reason: The interaction between IL-10 and IL-10RA is physiologically
critical and well-characterized, but "protein binding" is too vague. This
should be annotated as interleukin-10 receptor binding (GO:0005141) which
more precisely captures the functional nature of this interaction.
proposed_replacement_terms:
- id: GO:0005141
label: interleukin-10 receptor binding
supported_by:
- reference_id: PMID:11485736
supporting_text: Interleukin 10 (IL-10) is a dimeric cytokine that plays a
central role in suppressing inflammatory responses. These activities are
dependent on the interaction of IL-10 with its high-affinity receptor
(IL-10R1).
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12513909
review:
summary: IPI protein binding based on interaction with IL-10RB (Q08334) and
IL-10RA (Q13651). PMID:12513909 compares IL-22 and IL-10 soluble receptor
complexes.
action: MODIFY
reason: IL-10 binds both IL-10RA and IL-10RB as part of its receptor
complex. "Protein binding" is uninformative; should be interleukin-10
receptor binding (GO:0005141).
proposed_replacement_terms:
- id: GO:0005141
label: interleukin-10 receptor binding
supported_by:
- reference_id: PMID:12513909
supporting_text: IL-22 and IL-10 require different ligand-specific
receptor chains (IL-22R and IL-10R1) but share a second receptor chain
(IL-10R2) to initiate cellular responses.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15837194
review:
summary: IPI protein binding based on interaction with IL-10RA (Q13651).
action: MODIFY
reason: Another IL-10/IL-10RA interaction. Should be annotated as
interleukin-10 receptor binding (GO:0005141) for specificity.
proposed_replacement_terms:
- id: GO:0005141
label: interleukin-10 receptor binding
supported_by:
- reference_id: PMID:15837194
supporting_text: These functional differences have been correlated with
the approximately 1000-fold lower affinity of vIL-10, compared to
hIL-10, for the IL-10R1 receptor chain.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20462497
review:
summary: IPI protein binding from PMID:20462497, which describes the
structure and mechanism of receptor sharing by IL-10R2 (IL-10RB) common
chain. Interaction with Q08334 (IL-10RB) and Q13651 (IL-10RA).
action: MODIFY
reason: This paper provides structural evidence for IL-10 binding its
receptor chains. Should be annotated as interleukin-10 receptor binding
(GO:0005141).
proposed_replacement_terms:
- id: GO:0005141
label: interleukin-10 receptor binding
supported_by:
- reference_id: PMID:20462497
supporting_text: IL-10R2 is a shared cell surface receptor required for
the activation of five class 2 cytokines (IL-10, IL-22, IL-26, IL-28,
and IL-29) that play critical roles in host defense.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
review:
summary: IPI protein binding from the HuRI (Human Reference Interactome)
high-throughput yeast two-hybrid study (PMID:32296183). Interacting
partners include O76003, P0DPK4, P25490, P60410, Q8IUG1, Q9BYQ7 -- several
of which are keratin-associated proteins or other unlikely interaction
partners for a secreted cytokine.
action: REMOVE
reason: PMID:32296183 is a large-scale Y2H screen. The interacting partners
detected (keratins, KRTAP proteins) are likely non-physiological false
positives for IL-10, which is a secreted extracellular cytokine. These
interactions lack biological plausibility and are not supported by any
other evidence.
supported_by:
- reference_id: PMID:32296183
supporting_text: A reference map of the human binary protein interactome
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16982608
review:
summary: IPI protein binding with IL-10RA (Q13651) from PMID:16982608. This
paper likely describes IL-10 structural biology and receptor interaction.
action: MODIFY
reason: IL-10/IL-10RA interaction. Should be interleukin-10 receptor binding
(GO:0005141).
proposed_replacement_terms:
- id: GO:0005141
label: interleukin-10 receptor binding
supported_by:
- reference_id: PMID:16982608
supporting_text: Interleukin-10 receptor 2 (IL-10R2) is a critical
component of the IL-10.IL-10R1.IL-10R2 complex which regulates
IL-10-mediated immunomodulatory responses.
- term:
id: GO:0001818
label: negative regulation of cytokine production
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 is well-established as a
negative regulator of cytokine production.
action: ACCEPT
reason: This is a core function of IL-10. It was originally named Cytokine
Synthesis Inhibitory Factor (CSIF) precisely because it inhibits cytokine
production by monocytes (PMID:1940799). The IEA transfer is
well-supported.
- term:
id: GO:0001938
label: positive regulation of endothelial cell proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893) for positive regulation of
endothelial cell proliferation. This is a non-immune pleiotropic effect.
action: MARK_AS_OVER_ANNOTATED
reason: While IL-10 has been reported to have effects on endothelial cells,
this is a downstream pleiotropic effect rather than a core function. IL-10
is primarily an immune regulatory cytokine. The annotation represents an
over-annotation of a secondary effect observed in specific experimental
conditions.
- term:
id: GO:0005141
label: interleukin-10 receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 receptor binding is the
primary molecular function through which IL-10 initiates signaling.
action: ACCEPT
reason: IL-10 receptor binding is a core molecular function. IL-10 binds the
IL-10RA/IL-10RB receptor complex to initiate downstream JAK-STAT signaling
(UniProt P22301, deep research review).
- term:
id: GO:0008285
label: negative regulation of cell population proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 can inhibit
proliferation of certain cell types including T cells and some other cell
populations.
action: KEEP_AS_NON_CORE
reason: IL-10 can inhibit T cell proliferation (PMID:8499633) and has
anti-proliferative effects on some cell types, but this is a broad term
that does not capture the specific immune regulatory context. Acceptable
as a non-core annotation.
supported_by:
- reference_id: PMID:8499633
supporting_text: Human interleukin-10 (IL-10) inhibits T-cell
proliferation and cytokine production in the presence of monocytes.
- term:
id: GO:0009410
label: response to xenobiotic stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 expression may be
induced by xenobiotic stimuli in rats, but this is not a core function for
human IL-10.
action: MARK_AS_OVER_ANNOTATED
reason: Response to xenobiotic stimulus is a peripheral observation likely
from rodent studies where IL-10 expression was measured after xenobiotic
exposure. This does not represent a core function of IL-10 as a cytokine
and is an over-annotation from ortholog transfer.
- term:
id: GO:0014823
label: response to activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 levels may change with
physical activity in rats, but this is not a core function.
action: MARK_AS_OVER_ANNOTATED
reason: Response to activity (physical exercise) is a peripheral
observation. IL-10 levels may change as part of general immune modulation
during exercise, but this does not represent a core function of the
cytokine itself.
- term:
id: GO:0014854
label: response to inactivity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). Similar to response to
activity, this is a peripheral observation.
action: MARK_AS_OVER_ANNOTATED
reason: Response to inactivity is a peripheral observation from rodent
studies. Not a core function of IL-10 as an anti-inflammatory cytokine.
- term:
id: GO:0032496
label: response to lipopolysaccharide
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 is induced by LPS and
also modulates the response to LPS.
action: KEEP_AS_NON_CORE
reason: IL-10 is both induced by LPS stimulation and acts to suppress
LPS-induced inflammatory responses. This is a well-established aspect of
IL-10 biology (PMID:14971032, PMID:10443688), though it represents a
stimulus-response context rather than core function per se.
- term:
id: GO:0032720
label: negative regulation of tumor necrosis factor production
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for negative regulation of TNF production. IL-10 is
a potent suppressor of TNF production by monocytes/macrophages.
action: ACCEPT
reason: Suppression of TNF production was one of the earliest identified
functions of IL-10 (PMID:1940799) and is a core anti-inflammatory
activity. The TAS annotation from PMID:19262501 also supports this. This
IEA annotation is correct.
- term:
id: GO:0032868
label: response to insulin
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 levels may be affected
by insulin in metabolic contexts.
action: MARK_AS_OVER_ANNOTATED
reason: Response to insulin is a peripheral metabolic observation from
rodent studies. While there are links between IL-10 and metabolic
regulation, this is not a core function of IL-10 as an immune cytokine.
- term:
id: GO:0034115
label: negative regulation of heterotypic cell-cell adhesion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 can downregulate
adhesion molecules such as ICAM-1 on monocytes.
action: KEEP_AS_NON_CORE
reason: IL-10 downregulates ICAM-1 and other adhesion molecules on monocytes
(PMID:7512027 per UniProt), which affects cell-cell adhesion. This is a
downstream consequence of IL-10's anti-inflammatory program rather than a
core function, but it is a real effect.
- term:
id: GO:0034465
label: response to carbon monoxide
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 expression may be
induced by carbon monoxide in rat models.
action: MARK_AS_OVER_ANNOTATED
reason: Response to carbon monoxide is a highly peripheral observation from
rodent studies. This is not a core function of IL-10 and represents an
over-annotation via ortholog transfer.
- term:
id: GO:0043032
label: positive regulation of macrophage activation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). This seems contradictory since
IL-10 is primarily known to suppress macrophage activation, not promote
it.
action: UNDECIDED
reason: IL-10 is primarily known as an inhibitor of macrophage activation
(suppressing pro-inflammatory cytokine production and MHC class II
expression). While IL-10 can have some activating effects on macrophages
(e.g., promoting alternative/M2 activation), the annotation of "positive
regulation of macrophage activation" without qualification is potentially
misleading. The underlying rodent evidence is not accessible to verify.
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 can inhibit apoptosis in
certain cell types.
action: KEEP_AS_NON_CORE
reason: IL-10 has been shown to inhibit apoptosis in T cells starved of IL-2
(PMID:8312229) and can promote survival of certain immune cell types. This
is a real but non-core effect of IL-10 signaling.
supported_by:
- reference_id: PMID:8312229
supporting_text: IL-10 inhibits apoptotic cell death in human T cells
starved of IL-2.
- term:
id: GO:0043524
label: negative regulation of neuron apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 has been reported to
have neuroprotective effects in certain rodent models.
action: MARK_AS_OVER_ANNOTATED
reason: Neuroprotective effects of IL-10 have been observed in rodent models
of neuroinflammation, but this is a highly context-dependent downstream
effect rather than a core function of this immune cytokine.
Over-annotation via ortholog transfer.
- term:
id: GO:0045019
label: negative regulation of nitric oxide biosynthetic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 suppresses iNOS
expression and NO production in activated macrophages.
action: KEEP_AS_NON_CORE
reason: IL-10 suppresses iNOS expression and nitric oxide production as part
of its anti-inflammatory program in macrophages. This is a documented
downstream effect of IL-10-mediated suppression of inflammatory gene
expression, though not a core molecular function.
- term:
id: GO:0045787
label: positive regulation of cell cycle
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 can promote cell cycle
progression in certain cell types.
action: MARK_AS_OVER_ANNOTATED
reason: While IL-10 can promote proliferation of certain cell types (e.g., B
cells, mast cells), a generic "positive regulation of cell cycle"
annotation is over-broad and does not capture the specific immune context.
This is an over-annotation.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 signaling leads to
STAT3-dependent transcriptional activation of anti-inflammatory genes.
action: KEEP_AS_NON_CORE
reason: IL-10 does activate transcription of specific genes via STAT3, but
this is an extremely broad GO term. It is technically correct as a
downstream effect of IL-10 signaling but not informative about IL-10's
specific function.
- term:
id: GO:0050807
label: regulation of synapse organization
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 has been implicated in
neuroimmune contexts.
action: MARK_AS_OVER_ANNOTATED
reason: Regulation of synapse organization is a very peripheral observation
from rodent neuroimmune studies. This is not a core function of IL-10 as
an immune cytokine and represents an over-annotation via ortholog
transfer.
- term:
id: GO:0051384
label: response to glucocorticoid
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). Glucocorticoids can regulate
IL-10 expression.
action: KEEP_AS_NON_CORE
reason: IL-10 expression is known to be regulated by glucocorticoids (also
supported by IDA annotation from PMID:10443688). While this describes
regulation of IL-10 rather than a function of IL-10, the annotation is not
wrong per se. Keep as non-core.
- term:
id: GO:0071392
label: cellular response to estradiol stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 levels may respond to
estradiol in rodent studies.
action: MARK_AS_OVER_ANNOTATED
reason: Response to estradiol is a peripheral hormonal regulation
observation from rodent studies. Not a core function of IL-10.
- term:
id: GO:0097421
label: liver regeneration
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from rat Il10 (P29456). IL-10 may play a role in liver
regeneration in rodent models.
action: MARK_AS_OVER_ANNOTATED
reason: Liver regeneration is a highly tissue-specific and peripheral
observation. While IL-10 may be expressed during liver regeneration, this
is not a core function of this immune cytokine.
- term:
id: GO:1903034
label: regulation of response to wounding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 modulates wound
healing by regulating inflammatory responses.
action: KEEP_AS_NON_CORE
reason: IL-10 does modulate wound healing through its anti-inflammatory
properties, which is an extension of its core immune regulatory function.
Keep as non-core since it is a contextual application of the core
function.
- term:
id: GO:1903377
label: negative regulation of oxidative stress-induced neuron intrinsic
apoptotic signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). Highly specific
neuroprotective annotation from rodent models.
action: MARK_AS_OVER_ANNOTATED
reason: This is an extremely specific neuroprotective annotation from mouse
studies. IL-10 is not a neuron-specific factor; this represents a highly
contextual observation from specific experimental paradigms that does not
reflect a core function.
- term:
id: GO:1903672
label: positive regulation of sprouting angiogenesis
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 has been implicated in
angiogenesis regulation.
action: MARK_AS_OVER_ANNOTATED
reason: Regulation of angiogenesis is a downstream pleiotropic effect rather
than a core function of IL-10 as an immune cytokine. Over-annotation from
ortholog transfer.
- term:
id: GO:1904706
label: negative regulation of vascular associated smooth muscle cell
proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA transfer from mouse Il10 (P18893). IL-10 may inhibit vascular
smooth muscle cell proliferation.
action: MARK_AS_OVER_ANNOTATED
reason: Vascular smooth muscle cell proliferation regulation is a peripheral
non-immune effect. Over-annotation from ortholog transfer.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:7749983
review:
summary: IDA annotation from PMID:7749983. This paper is about OX40L
(TNFSF4), not about IL-10, so the reference is misattributed. However,
IL-10 signaling through STAT3 does activate transcription of target genes,
so the annotation itself is not wrong -- it is just a very broad term.
Consistent with the IEA annotation for the same term which is marked
KEEP_AS_NON_CORE.
action: KEEP_AS_NON_CORE
reason: The reference PMID:7749983 is misattributed (it describes OX40L
cross-linking on murine B cells, not IL-10). Nevertheless, IL-10 does
positively regulate transcription by RNA polymerase II via STAT3 signaling
(PMID:16982608), so the annotation is biologically correct though overly
broad. This is consistent with the IEA annotation for the same GO term.
Kept as non-core because the term does not capture IL-10's specific
function.
supported_by:
- reference_id: PMID:7749983
supporting_text: OX40 is a member of the TNF/NGF-receptor family expressed
on activated T cells, whose ligand is found on activated T and B cells
- term:
id: GO:0140105
label: interleukin-10-mediated signaling pathway
evidence_type: IDA
original_reference_id: PMID:7749983
review:
summary: IDA annotation from PMID:7749983. The reference is misattributed
(paper is about OX40L/TNFSF4, not IL-10). However, IL-10 is the defining
ligand for the IL-10-mediated signaling pathway, so the annotation itself
is correct and well-supported by IBA, IDA from PMID:10443688, and IDA from
PMID:24994464.
action: ACCEPT
reason: IL-10 is the defining ligand for the IL-10-mediated signaling
pathway; this is a core function that is essentially tautological. The
reference PMID:7749983 is misattributed (it describes OX40L cross-linking
on murine B cells), but the annotation is strongly supported by multiple
other evidence lines including IBA (GO_REF:0000033), IDA (PMID:10443688),
and IDA (PMID:24994464). Accepting the annotation despite the reference
error because the biology is unambiguous.
supported_by:
- reference_id: PMID:7749983
supporting_text: OX40 is a member of the TNF/NGF-receptor family expressed
on activated T cells, whose ligand is found on activated T and B cells
- term:
id: GO:0140105
label: interleukin-10-mediated signaling pathway
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA annotation for IL-10-mediated signaling pathway from
PMID:10443688. This publication is not available for review but is
frequently cited for IL-10 annotations and is likely a primary study of
IL-10 signaling.
action: ACCEPT
reason: IL-10 is the defining ligand for the IL-10-mediated signaling
pathway. This PMID is cited for multiple IL-10 annotations and appears to
be a key primary study. The annotation is consistent with the known
biology of IL-10.
supported_by:
- reference_id: PMID:10443688
supporting_text: interleukin (IL)-10 (an anti-inflammatory cytokine) to
differentially regulate the sensitivity of human monocytes/macrophages
to glucocorticoids.
- term:
id: GO:0046427
label: positive regulation of receptor signaling pathway via JAK-STAT
evidence_type: IDA
original_reference_id: PMID:16982608
review:
summary: IDA annotation for positive regulation of JAK-STAT signaling from
PMID:16982608. This paper likely describes the structural basis of IL-10
signaling through its receptor complex to activate JAK1/TYK2/STAT3.
action: ACCEPT
reason: This is a core aspect of IL-10 function. IL-10 engagement of
IL-10RA/IL-10RB activates JAK1 and TYK2, leading to STAT3 phosphorylation.
PMID:16982608 is cited multiple times for IL-10 receptor and signaling
annotations, suggesting it is a key structural/functional study (deep
research review).
supported_by:
- reference_id: PMID:16982608
supporting_text: The ternary IL-10 signaling complex is assembled in a
sequential order with the IL-10.IL-10R1 interaction occurring first
followed by engagement of the IL-10R2 chain.
- term:
id: GO:0050864
label: regulation of B cell activation
evidence_type: IDA
original_reference_id: PMID:35443184
review:
summary: IDA annotation for regulation of B cell activation from
PMID:35443184. IL-10 has well-established effects on B cells.
action: KEEP_AS_NON_CORE
reason: IL-10 regulates B cell activation, which is a real but non-core
function relative to its primary anti-inflammatory role. IL-10 was
originally characterized as a B cell growth factor as well as a cytokine
synthesis inhibitor (PMID:9184696, deep research review). Keep as
non-core.
supported_by:
- reference_id: PMID:35443184
supporting_text: Regulatory B cells (Bregs) suppress immune responses
through the secretion of interleukin-10 (IL-10). This immunomodulatory
capacity holds therapeutic potential, yet a definitional immunophenotype
for enumeration and prospective isolation of B cells capable of IL-10
production remains elusive.
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IDA
original_reference_id: PMID:24994464
review:
summary: IDA annotation for cytokine activity from PMID:24994464 (about IL10
serum levels in HCV patients). This confirms IL-10 functions as a
circulating cytokine.
action: ACCEPT
reason: Cytokine activity is the core molecular function of IL-10. Multiple
lines of evidence support this (PMID:1940799, PMID:24994464, IBA, IEA).
supported_by:
- reference_id: PMID:24994464
supporting_text: the levels of IL10 seem to influence response to IFNα/RIB
therapy.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:24994464
review:
summary: IDA for extracellular space from PMID:24994464 (IL10 serum levels).
action: ACCEPT
reason: IL-10 is a secreted cytokine detected in serum/plasma. Extracellular
space localization is well-established.
supported_by:
- reference_id: PMID:24994464
supporting_text: IL10 serum levels could be further explored as a useful
algorithm for identify the CT/TT SVR patients.
- term:
id: GO:0140105
label: interleukin-10-mediated signaling pathway
evidence_type: IDA
original_reference_id: PMID:24994464
review:
summary: IDA for IL-10-mediated signaling pathway from PMID:24994464.
action: ACCEPT
reason: IL-10 is the defining ligand for IL-10-mediated signaling. This is a
core annotation well-supported by multiple evidence lines.
supported_by:
- reference_id: PMID:24994464
supporting_text: the levels of IL10 seem to influence response to IFNα/RIB
therapy.
- term:
id: GO:0071222
label: cellular response to lipopolysaccharide
evidence_type: IDA
original_reference_id: PMID:23071313
review:
summary: IDA annotation for cellular response to LPS from PMID:23071313.
IL-10 is both induced by and modulates the cellular response to LPS.
action: KEEP_AS_NON_CORE
reason: IL-10 modulates the cellular response to LPS by suppressing
pro-inflammatory cytokine production. This is a well-established aspect of
IL-10 biology but represents a specific stimulus-response context rather
than core function.
supported_by:
- reference_id: PMID:23071313
supporting_text: IL-10 is a potent anti-inflammatory molecule that, in
phagocytes, negatively targets cytokine expression at transcriptional
and posttranscriptional levels.
- term:
id: GO:1902895
label: positive regulation of miRNA transcription
evidence_type: IDA
original_reference_id: PMID:23071313
review:
summary: IDA annotation for positive regulation of miRNA transcription from
PMID:23071313. IL-10 has been shown to regulate miRNA expression as part
of its signaling.
action: KEEP_AS_NON_CORE
reason: IL-10 signaling through STAT3 can regulate miRNA transcription as a
downstream effect. This is a mechanistic detail of IL-10 signaling rather
than a core function, but it is experimentally supported. Keep as
non-core.
supported_by:
- reference_id: PMID:23071313
supporting_text: we identify miR-187 as an IL-10-dependent miRNA playing a
role in IL-10-mediated suppression of TNF-α, IL-6, and the p40 subunit
of IL-12 (IL-12p40) produced by primary human monocytes following
activation of Toll-like receptor 4 (TLR4).
- term:
id: GO:0050728
label: negative regulation of inflammatory response
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA annotation for negative regulation of inflammatory response
from PMID:10443688. This is a core function of IL-10.
action: ACCEPT
reason: This is the single most important function of IL-10. The
anti-inflammatory activity of IL-10 has been demonstrated in numerous
experimental systems (PMID:1940799, PMID:10443688, deep research review).
supported_by:
- reference_id: PMID:10443688
supporting_text: IL-10 acts synergistically with glucocorticoids. This is
accompanied by opposite glucocorticoid receptor changes, respectively
opposing and favoring glucocorticoid actions.
- term:
id: GO:0001818
label: negative regulation of cytokine production
evidence_type: IDA
original_reference_id: PMID:1940799
review:
summary: IDA annotation for negative regulation of cytokine production from
PMID:1940799. This is the seminal paper by de Waal Malefyt et al. (1991)
establishing IL-10 as a cytokine synthesis inhibitor.
action: ACCEPT
reason: This is one of the most fundamental annotations for IL-10.
PMID:1940799 demonstrated that IL-10 inhibits cytokine synthesis by human
monocytes. IL-10 was originally named Cytokine Synthesis Inhibitory Factor
(CSIF) based on this activity.
supported_by:
- reference_id: PMID:1940799
supporting_text: 'Interleukin 10(IL-10) inhibits cytokine synthesis by human
monocytes: an autoregulatory role of IL-10 produced by monocytes.'
- term:
id: GO:0010507
label: negative regulation of autophagy
evidence_type: IDA
original_reference_id: PMID:26962683
review:
summary: IDA annotation for negative regulation of autophagy from
PMID:26962683, which showed IL-10 inhibits starvation-induced autophagy in
hypertrophic scar fibroblasts via STAT3/AKT-mTOR signaling crosstalk.
action: KEEP_AS_NON_CORE
reason: IL-10 has been shown to inhibit autophagy in hypertrophic scar
fibroblasts via crosstalk between IL10-IL10R-STAT3 and IL10-AKT-mTOR
pathways (PMID:26962683). This is a real but highly context-specific
effect, not a core function of IL-10.
supported_by:
- reference_id: PMID:26962683
supporting_text: IL10 inhibits starvation-induced autophagy in
hypertrophic scar fibroblasts via cross talk between the
IL10-IL10R-STAT3 and IL10-AKT-mTOR pathways.
- term:
id: GO:0045347
label: negative regulation of MHC class II biosynthetic process
evidence_type: IDA
original_reference_id: PMID:1940799
review:
summary: IDA annotation for negative regulation of MHC class II biosynthetic
process from PMID:1940799. IL-10 downregulates MHC class II expression on
monocytes.
action: ACCEPT
reason: IL-10 downregulation of MHC class II expression on monocytes and
macrophages is a core function directly related to its immune suppressive
activity (PMID:1940799, PMID:8144879 per UniProt, deep research review).
supported_by:
- reference_id: PMID:1940799
supporting_text: 'Interleukin 10(IL-10) inhibits cytokine synthesis by human
monocytes: an autoregulatory role of IL-10 produced by monocytes.'
- term:
id: GO:0046983
label: protein dimerization activity
evidence_type: IDA
original_reference_id: PMID:16982608
review:
summary: IDA annotation for protein dimerization activity from
PMID:16982608. IL-10 functions as a homodimer.
action: ACCEPT
reason: IL-10 forms a non-covalent homodimer as its biologically active
form. The dimer is stabilized by domain swapping and intrachain disulfide
bonds. This is well-established from crystal structures and biochemical
studies (UniProt P22301, PMID:8364028, deep research review).
supported_by:
- reference_id: PMID:16982608
supporting_text: These studies highlight the importance of structure in
regulating low affinity protein-protein interactions and IL-10 signal
transduction.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:16606666
review:
summary: IDA annotation for positive regulation of transcription from
PMID:16606666. IL-10 signaling through STAT3 activates transcription of
target genes.
action: KEEP_AS_NON_CORE
reason: IL-10 does activate transcription via STAT3 signaling. This is
technically correct but is a very broad term. The specific transcriptional
effects (anti-inflammatory gene induction) are better captured by other
annotations. Keep as non-core.
supported_by:
- reference_id: PMID:16606666
supporting_text: Interleukin (IL)-6 and IL-10 are found in high
concentrations in the tumor microenvironment. These cytokines stimulate
macrophage B7-H4 expression.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:17875732
review:
summary: IMP annotation for positive regulation of transcription from
PMID:17875732. This paper showed that tumor Treg cells enable macrophages
to produce IL-10 and IL-6, and that tumor macrophages stimulate B7-H4
expression in an autocrine manner through IL-10 and IL-6. IL-10 thus
indirectly promotes transcription of B7-H4 in this tumor microenvironment
context.
action: KEEP_AS_NON_CORE
reason: PMID:17875732 demonstrates that IL-10 (produced by Treg-stimulated
macrophages) stimulates B7-H4 expression on macrophages in ovarian
carcinoma, which constitutes positive regulation of transcription. This is
consistent with IL-10's known ability to activate STAT3-dependent gene
transcription and with the IDA annotation for the same term (GO:0045893)
from PMID:16606666, which is also marked KEEP_AS_NON_CORE. The
transcriptional regulation is a downstream consequence of IL-10 signaling
rather than a core function.
supported_by:
- reference_id: PMID:17875732
supporting_text: Tumor Treg cells enabled macrophages to spontaneously
produce interleukin (IL)-10 and IL-6. Tumor macrophages stimulated B7-H4
expression in an autocrine manner through IL-10 and IL-6.
- term:
id: GO:0007259
label: cell surface receptor signaling pathway via JAK-STAT
evidence_type: NAS
original_reference_id: PMID:33737461
review:
summary: NAS annotation for JAK-STAT signaling from PMID:33737461
(ComplexPortal). IL-10 signals through its receptor complex to activate
JAK-STAT signaling.
action: ACCEPT
reason: IL-10 signaling through JAK1/TYK2/STAT3 is a core pathway. This NAS
annotation from ComplexPortal is consistent with the well-established
signaling mechanism (deep research review).
supported_by:
- reference_id: PMID:33737461
supporting_text: We used a structure-based approach to deconvolute IL-10
pleiotropy by determining the structure of the IL-10 receptor (IL-10R)
complex by cryo-electron microscopy at a resolution of 3.5 angstroms.
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: NAS
original_reference_id: PMID:31611251
review:
summary: NAS annotation for positive regulation of cell proliferation from
PMID:31611251 (ComplexPortal).
action: KEEP_AS_NON_CORE
reason: IL-10 can promote proliferation of certain cell types, particularly
B cells and mast cells. However, it also inhibits proliferation of other
cell types (T cells). This is a context-dependent effect, keep as
non-core.
supported_by:
- reference_id: PMID:31611251
supporting_text: IL-10 (Fiorentino et al., 1989; Moore et al., 1990) is
the founding member of a family of cytokines that also includes IL-19,
IL-20, IL-22, IL-24, IL-26, IL-28A, IL-28B, and IL-29
- term:
id: GO:0019221
label: cytokine-mediated signaling pathway
evidence_type: NAS
original_reference_id: PMID:33737461
review:
summary: NAS annotation for cytokine-mediated signaling pathway from
ComplexPortal.
action: ACCEPT
reason: IL-10 is a cytokine that mediates signaling through its receptor.
This is a core annotation that is well-supported (deep research review).
supported_by:
- reference_id: PMID:33737461
supporting_text: Interleukin-10 (IL-10) is an immunoregulatory cytokine
with both anti-inflammatory and immunostimulatory properties and is
frequently dysregulated in disease.
- term:
id: GO:0042531
label: positive regulation of tyrosine phosphorylation of STAT protein
evidence_type: NAS
original_reference_id: PMID:16982608
review:
summary: NAS annotation for positive regulation of STAT tyrosine
phosphorylation from PMID:16982608.
action: ACCEPT
reason: IL-10 signaling leads to JAK1/TYK2-mediated tyrosine phosphorylation
of STAT3, which is the canonical downstream signaling event. This is a
core mechanistic annotation (PMID:16982608, deep research review).
supported_by:
- reference_id: PMID:16982608
supporting_text: The basic mechanistic features of the assembly process
are likely shared by six additional class-2 cytokines (viral IL-10s,
IL-22, IL-26, IL-28A, IL28B, and IL-29) to promote IL-10R2 binding to
six additional receptor complexes.
- term:
id: GO:0050728
label: negative regulation of inflammatory response
evidence_type: NAS
original_reference_id: PMID:31611251
review:
summary: NAS annotation for negative regulation of inflammatory response
from ComplexPortal.
action: ACCEPT
reason: Anti-inflammatory activity is the core function of IL-10. Multiple
evidence codes support this annotation (IBA, IDA, NAS from multiple
sources).
supported_by:
- reference_id: PMID:31611251
supporting_text: The cytokine IL-10 is a key anti-inflammatory mediator
ensuring protection of a host from over-exuberant responses to pathogens
and microbiota
- term:
id: GO:0050728
label: negative regulation of inflammatory response
evidence_type: NAS
original_reference_id: PMID:21857966
review:
summary: NAS annotation for negative regulation of inflammatory response
from PMID:21857966, which is about WNT5A signaling and neuroinflammation.
action: ACCEPT
reason: While PMID:21857966 is primarily about WNT5A, IL-10 is mentioned as
an anti-inflammatory cytokine in the context of neuroinflammation. The
annotation itself is correct regardless of the reference context.
supported_by:
- reference_id: PMID:21857966
supporting_text: We found that IL-10, a prototypic anti-inflammatory
cytokine, caused concentration-dependent rescue effects on Aβ toxicity
- term:
id: GO:0034115
label: negative regulation of heterotypic cell-cell adhesion
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from mouse Il10 (P18893) for negative
regulation of heterotypic cell-cell adhesion. IL-10 downregulates adhesion
molecules.
action: KEEP_AS_NON_CORE
reason: IL-10 downregulates ICAM-1 and other adhesion molecules on monocytes
(PMID:7512027 per UniProt), which affects cell-cell adhesion. Transfer
from mouse Il10 is reasonable. Keep as non-core.
- term:
id: GO:0034116
label: positive regulation of heterotypic cell-cell adhesion
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from FasL/TNFSF6 (P06804) for positive
regulation of heterotypic cell-cell adhesion. This is an inappropriate
transfer.
action: REMOVE
reason: This annotation was transferred from FasL (TNFSF6, P06804), which is
a death ligand in the TNF superfamily. IL-10 is an anti-inflammatory
cytokine in the IL-10 family. These proteins are functionally very
different and the transfer is inappropriate. FasL mediates apoptotic and
adhesion effects through completely different mechanisms than IL-10.
- term:
id: GO:0045930
label: negative regulation of mitotic cell cycle
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate
transfer.
action: REMOVE
reason: Transfer from FasL (P06804) is inappropriate. FasL-mediated cell
cycle arrest is related to its death receptor signaling, which has no
mechanistic parallel in IL-10 biology.
- term:
id: GO:0072577
label: endothelial cell apoptotic process
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate
transfer.
action: REMOVE
reason: Transfer from FasL (P06804) is inappropriate. FasL induces apoptosis
through Fas receptor engagement, which is mechanistically unrelated to
IL-10 function. IL-10 is generally anti-apoptotic, not pro-apoptotic.
- term:
id: GO:1904706
label: negative regulation of vascular associated smooth muscle cell
proliferation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from mouse Il10 (P18893). IL-10 may
inhibit vascular smooth muscle cell proliferation.
action: MARK_AS_OVER_ANNOTATED
reason: Transfer from mouse Il10 (P18893) is reasonable in principle, but
regulation of vascular smooth muscle cell proliferation is a peripheral
non-immune effect. Over-annotation for this immune cytokine.
- term:
id: GO:1904707
label: positive regulation of vascular associated smooth muscle cell
proliferation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from FasL/TNFSF6 (P06804). Inappropriate
transfer.
action: REMOVE
reason: Transfer from FasL (P06804) is inappropriate. The functional
mechanisms of FasL and IL-10 are completely different, and the vascular
smooth muscle proliferation effects of FasL cannot be transferred to
IL-10.
- term:
id: GO:0008285
label: negative regulation of cell population proliferation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from mouse Il10 (P18893). IL-10 can
inhibit proliferation of certain cell types.
action: KEEP_AS_NON_CORE
reason: IL-10 can inhibit T cell proliferation (PMID:8499633) and has
anti-proliferative effects on certain cell types. Transfer from mouse Il10
is reasonable. Keep as non-core.
- term:
id: GO:1903034
label: regulation of response to wounding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: ISS annotation transferred from mouse Il10 (P18893). IL-10
modulates wound healing through anti-inflammatory effects.
action: KEEP_AS_NON_CORE
reason: IL-10 modulates wound healing responses through its
anti-inflammatory properties. Transfer from mouse Il10 is reasonable. Keep
as non-core.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-449803
review:
summary: TAS annotation for extracellular region from Reactome (IL10 dimer
binds IL10RA:JAK1). IL-10 is a secreted protein.
action: ACCEPT
reason: IL-10 is secreted and localizes to the extracellular region where it
binds its receptor complex. Reactome pathway annotation is consistent with
known biology.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-449811
review:
summary: TAS for extracellular region from Reactome (IL10
dimer:2xIL10RA1:JAK1 binds IL10RB:TYK2).
action: ACCEPT
reason: Same as above. IL-10 is extracellular. Reactome annotation
consistent with known biology.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-449855
review:
summary: TAS for extracellular region from Reactome (IL10 dimerizes).
action: ACCEPT
reason: IL-10 dimerizes in the extracellular space. Correct annotation.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6784006
review:
summary: TAS for extracellular region from Reactome (STAT3 phosphorylation
by JAK1/TYK2).
action: ACCEPT
reason: IL-10 is the extracellular ligand in this signaling event. Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6784319
review:
summary: TAS for extracellular region from Reactome (JAK1,TYK2
phosphorylation).
action: ACCEPT
reason: IL-10 is extracellular during this signaling step. Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6784323
review:
summary: TAS for extracellular region from Reactome (receptor complex binds
STAT3).
action: ACCEPT
reason: IL-10 remains in the extracellular region bound to its receptor.
Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6784324
review:
summary: TAS for extracellular region from Reactome (IL10RA
phosphorylation).
action: ACCEPT
reason: IL-10 is extracellular in this signaling context. Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6784791
review:
summary: TAS for extracellular region from Reactome (STAT3 dissociation from
receptor).
action: ACCEPT
reason: IL-10 is extracellular. Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6789615
review:
summary: TAS for extracellular region from Reactome (STAT3-upregulated
extracellular protein expression).
action: ACCEPT
reason: IL-10 is extracellular. Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8981073
review:
summary: TAS for extracellular region from Reactome (Expression of
Interleukin-10).
action: ACCEPT
reason: IL-10 is expressed and secreted to the extracellular region.
Correct.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9664346
review:
summary: TAS for extracellular region from Reactome (IL10 gene produces IL10
protein).
action: ACCEPT
reason: IL-10 is a secreted extracellular protein. Correct.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:21323571
review:
summary: IDA for extracellular space from PMID:21323571, which studied
cytokines in premature coronary artery disease patients.
action: ACCEPT
reason: IL-10 is detected in the extracellular space (serum/plasma) of
patients. Consistent with IL-10 being a secreted cytokine.
supported_by:
- reference_id: PMID:21323571
supporting_text: Serum IL-10, IL-18, and TNF-alpha were measured using
enzyme-linked immunosorbent assay
- term:
id: GO:0032692
label: negative regulation of interleukin-1 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS annotation for negative regulation of IL-1 production from
PMID:19262501, about regulatory B cells in sheep Peyer's patches that
secrete IL-10 and downregulate TLR9-induced cytokine responses.
action: ACCEPT
reason: IL-10 inhibition of IL-1 production is well-established as part of
its core anti-inflammatory function. The original CSIF description
(PMID:1940799) showed IL-10 inhibits multiple pro-inflammatory cytokines.
PMID:19262501 provides additional evidence from Peyer's patch B cells.
supported_by:
- reference_id: PMID:19262501
supporting_text: A novel regulatory B-cell population in sheep Peyer's
patches spontaneously secretes IL-10 and downregulates TLR9-induced
IFNalpha responses.
- term:
id: GO:0032695
label: negative regulation of interleukin-12 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of IL-12 production from PMID:19262501.
action: ACCEPT
reason: IL-10 inhibition of IL-12 production by monocytes/macrophages and
dendritic cells is one of its most important anti-inflammatory activities.
IL-12 suppression is critical for limiting Th1 responses (PMID:19262501,
deep research review).
supported_by:
- reference_id: PMID:19262501
supporting_text: Neutralization of the IL-10 or depletion of CD21(+) B
cells resulted in a significant increase in CpG-induced
IFNalpha-response in PPs, suggesting that IL-10 from B cells regulate
innate responses in PPs.
- term:
id: GO:0032701
label: negative regulation of interleukin-18 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of IL-18 production from PMID:19262501.
action: ACCEPT
reason: IL-10 suppression of IL-18 production is consistent with its broad
anti-inflammatory activity. IL-18 is a pro-inflammatory cytokine that
IL-10 is known to suppress (PMID:19262501).
supported_by:
- reference_id: PMID:19262501
supporting_text: PP cells spontaneously secreted high levels of IL-10, and
the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B
cells.
- term:
id: GO:0032715
label: negative regulation of interleukin-6 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of IL-6 production from PMID:19262501.
action: ACCEPT
reason: IL-10 inhibition of IL-6 production is well-established and also
supported by IDA annotation from PMID:10443688 (PMID:19262501).
supported_by:
- reference_id: PMID:19262501
supporting_text: PP cells spontaneously secreted high levels of IL-10, and
the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B
cells.
- term:
id: GO:0032717
label: negative regulation of interleukin-8 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of IL-8 production from PMID:19262501.
action: ACCEPT
reason: IL-10 inhibition of IL-8 (CXCL8) production is part of its broad
suppression of pro-inflammatory mediators (PMID:19262501).
supported_by:
- reference_id: PMID:19262501
supporting_text: PP cells spontaneously secreted high levels of IL-10, and
the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B
cells.
- term:
id: GO:0032720
label: negative regulation of tumor necrosis factor production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of TNF production from PMID:19262501.
action: ACCEPT
reason: IL-10 suppression of TNF production is one of the earliest and best
characterized functions of IL-10 (PMID:1940799, PMID:19262501).
supported_by:
- reference_id: PMID:19262501
supporting_text: A novel regulatory B-cell population in sheep Peyer's
patches spontaneously secretes IL-10 and downregulates TLR9-induced
IFNalpha responses.
- term:
id: GO:0071650
label: negative regulation of chemokine (C-C motif) ligand 5 production
evidence_type: TAS
original_reference_id: PMID:19262501
review:
summary: TAS for negative regulation of CCL5 (RANTES) production from
PMID:19262501.
action: ACCEPT
reason: IL-10 suppression of chemokine production including CCL5/RANTES is
consistent with its broad anti-inflammatory activity (PMID:19262501).
supported_by:
- reference_id: PMID:19262501
supporting_text: These IL-10-secreting PP B cells may represent a novel
subset of the recently proposed regulatory B cells (B(regs)) in the
intestine.
- term:
id: GO:1903659
label: regulation of complement-dependent cytotoxicity
evidence_type: IMP
original_reference_id: PMID:16034134
negated: true
review:
summary: 'NOT annotation: IL-10 does NOT regulate complement-dependent cytotoxicity
based on PMID:16034134.'
action: ACCEPT
reason: This is a NOT annotation indicating IL-10 was tested and found not
to regulate complement-dependent cytotoxicity. Negative results are
informative and should be retained.
supported_by:
- reference_id: PMID:16034134
supporting_text: porcine EC incubated with IL-4 or IL-13, but not with
IL-10 or IL-11, became protected from killing by complement and
apoptosis induced by TNF-alpha plus cycloheximide.
- term:
id: GO:2000352
label: negative regulation of endothelial cell apoptotic process
evidence_type: IMP
original_reference_id: PMID:16034134
negated: true
review:
summary: 'NOT annotation: IL-10 does NOT negatively regulate endothelial cell
apoptotic process based on PMID:16034134.'
action: ACCEPT
reason: This is a NOT annotation indicating IL-10 was tested and found not
to inhibit endothelial cell apoptosis. Negative results are informative.
supported_by:
- reference_id: PMID:16034134
supporting_text: porcine EC incubated with IL-4 or IL-13, but not with
IL-10 or IL-11, became protected from killing by complement and
apoptosis induced by TNF-alpha plus cycloheximide.
- term:
id: GO:0042130
label: negative regulation of T cell proliferation
evidence_type: NAS
original_reference_id: PMID:14971032
review:
summary: NAS for negative regulation of T cell proliferation from
PMID:14971032. IL-10 upregulates LIR-2 on DCs, causing T cell
hyporesponsiveness.
action: ACCEPT
reason: IL-10 inhibition of T cell proliferation is well-documented.
PMID:14971032 showed IL-10 regulates LIR-2 on dendritic cells resulting in
T cell hyporesponsiveness. Also supported by PMID:8499633 which showed
direct inhibition of T cell growth.
supported_by:
- reference_id: PMID:14971032
supporting_text: Interleukin 10 regulates cell surface and soluble LIR-2
(CD85d) expression on dendritic cells resulting in T cell
hyporesponsiveness in vitro.
- reference_id: PMID:8499633
supporting_text: Human interleukin-10 (IL-10) inhibits T-cell
proliferation and cytokine production in the presence of monocytes.
- term:
id: GO:0071222
label: cellular response to lipopolysaccharide
evidence_type: NAS
original_reference_id: PMID:14971032
review:
summary: NAS for cellular response to LPS from PMID:14971032. IL-10
modulates the response to LPS.
action: KEEP_AS_NON_CORE
reason: IL-10 modulates the cellular response to LPS stimulation by
suppressing pro-inflammatory cytokine production. This is a
stimulus-response context for IL-10 function. Keep as non-core.
supported_by:
- reference_id: PMID:14971032
supporting_text: LPS-stimulated, LIR-2-transfected DC inhibited the
proliferation of T cells in autologous, as well as allogeneic culture
systems in vitro.
- term:
id: GO:0060302
label: negative regulation of cytokine activity
evidence_type: IMP
original_reference_id: PMID:9847016
review:
summary: IMP annotation for negative regulation of cytokine activity from
PMID:9847016. IL-10 suppresses cytokine activity as part of its
anti-inflammatory program.
action: ACCEPT
reason: IL-10 negatively regulates the activity of multiple pro-inflammatory
cytokines. This is consistent with its core anti-inflammatory function.
supported_by:
- reference_id: PMID:9847016
supporting_text: Preincubation of LPS-stimulated peritoneal macrophages
with rhuIL-10 caused significant (P<0.05) reduction in secretion of TNF,
IL-6, and PGE2, in a dose-dependent manner.
- term:
id: GO:0002904
label: positive regulation of B cell apoptotic process
evidence_type: IDA
original_reference_id: PMID:9184696
review:
summary: 'IDA for positive regulation of B cell apoptotic process from PMID:9184696.
This paper showed dual effects of IL-10 on SAC-activated B cells: promoting
apoptosis at the initiation of activation and proliferation after pre-activation.'
action: KEEP_AS_NON_CORE
reason: PMID:9184696 demonstrated that IL-10 has dual effects on B cells
depending on activation state. IL-10 induces apoptosis in B cells at early
stages of activation while promoting survival/proliferation of
pre-activated B cells. The pro-apoptotic effect is context-dependent and
not a core function.
supported_by:
- reference_id: PMID:9184696
supporting_text: The apoptosis and proliferation of SAC-activated B cells
by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1
expression.
- term:
id: GO:0010468
label: regulation of gene expression
evidence_type: IDA
original_reference_id: PMID:9184696
review:
summary: IDA for regulation of gene expression from PMID:9184696. IL-10
treatment altered expression of Bcl-2, Bcl-xL, and Mcl-1 in B cells.
action: KEEP_AS_NON_CORE
reason: IL-10 does regulate gene expression through STAT3 signaling. This is
a very broad term; the specific gene expression changes (Bcl-2 family
members) are context-specific to the B cell activation study
(PMID:9184696). Keep as non-core.
supported_by:
- reference_id: PMID:9184696
supporting_text: The apoptosis and proliferation of SAC-activated B cells
by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1
expression.
- term:
id: GO:0030889
label: negative regulation of B cell proliferation
evidence_type: IDA
original_reference_id: PMID:9184696
review:
summary: IDA for negative regulation of B cell proliferation from
PMID:9184696. Context-dependent effect of IL-10 on B cell proliferation.
action: KEEP_AS_NON_CORE
reason: PMID:9184696 showed that IL-10 can inhibit B cell proliferation
depending on the activation state of the B cells. This is a real but
context-dependent effect. Keep as non-core.
supported_by:
- reference_id: PMID:9184696
supporting_text: The apoptosis and proliferation of SAC-activated B cells
by IL-10 are associated with changes in Bcl-2, Bcl-xL, and Mcl-1
expression.
- term:
id: GO:0051045
label: negative regulation of membrane protein ectodomain proteolysis
evidence_type: IDA
original_reference_id: PMID:18383040
review:
summary: IDA for negative regulation of membrane protein ectodomain
proteolysis from PMID:18383040. IL-10 may inhibit shedding of certain
membrane proteins.
action: KEEP_AS_NON_CORE
reason: PMID:18383040 showed IL-10 inhibits TACE/ADAM-17 activity on
monocytes, which regulates TNF-alpha shedding. This is a downstream effect
of IL-10 anti-inflammatory signaling. Keep as non-core.
supported_by:
- reference_id: PMID:18383040
supporting_text: In the presence of IL-10, TNF-alpha production and
activation of surface TACE was significantly inhibited.
- term:
id: GO:0001819
label: positive regulation of cytokine production
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA for positive regulation of cytokine production from
PMID:10443688. IL-10 can positively regulate production of certain
cytokines while suppressing others.
action: KEEP_AS_NON_CORE
reason: While IL-10 is primarily known as an inhibitor of pro-inflammatory
cytokines, it can promote production of certain cytokines (e.g., it can
enhance IL-1RA production). This dual activity is consistent with IL-10
biology. Keep as non-core since the primary function is anti-inflammatory.
supported_by:
- reference_id: PMID:10443688
supporting_text: its effect on IL-10 secretion was biphasic, producing
stimulation at lower, and inhibition at higher doses.
- term:
id: GO:0002719
label: negative regulation of cytokine production involved in immune
response
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA for negative regulation of cytokine production in immune
response from PMID:10443688.
action: ACCEPT
reason: This is a core function of IL-10. It specifically captures the
immune context of IL-10's cytokine-suppressive activity. More specific
than the general negative regulation of cytokine production (GO:0001818)
and directly relevant to IL-10's primary role.
supported_by:
- reference_id: PMID:10443688
supporting_text: Dexamethasone had different effects on LPS-induced
TNFalpha and IL-10 secretion; whereas it suppressed TNFalpha in a
dose-dependent fashion
- term:
id: GO:0005125
label: cytokine activity
evidence_type: NAS
original_reference_id: PMID:10443688
review:
summary: NAS for cytokine activity from PMID:10443688. Redundant with IBA
and IDA annotations.
action: ACCEPT
reason: Cytokine activity is the core molecular function. Multiple evidence
codes support this annotation.
supported_by:
- reference_id: PMID:10443688
supporting_text: interleukin (IL)-10 (an anti-inflammatory cytokine)
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA for extracellular space from PMID:10443688.
action: ACCEPT
reason: IL-10 is secreted and found in the extracellular space.
Well-established.
supported_by:
- reference_id: PMID:10443688
supporting_text: the sensitivity of these cells to glucocorticoids is
altered by TNFalpha or IL-10 pretreatment
- term:
id: GO:0032715
label: negative regulation of interleukin-6 production
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA for negative regulation of IL-6 production from PMID:10443688.
action: ACCEPT
reason: IL-10 suppression of IL-6 production is a well-characterized core
anti-inflammatory activity. Also supported by TAS from PMID:19262501.
supported_by:
- reference_id: PMID:10443688
supporting_text: with IL-10 improved, the ability of dexamethasone to
suppress IL-6 secretion in whole-blood cell cultures
- term:
id: GO:0051384
label: response to glucocorticoid
evidence_type: IDA
original_reference_id: PMID:10443688
review:
summary: IDA for response to glucocorticoid from PMID:10443688. IL-10
expression is regulated by glucocorticoids.
action: KEEP_AS_NON_CORE
reason: Glucocorticoid regulation of IL-10 expression is documented but
describes regulation of IL-10 rather than a core function of IL-10 itself.
Keep as non-core.
supported_by:
- reference_id: PMID:10443688
supporting_text: IL-10 increased (P < 0.001), the concentration of
dexamethasone binding sites in these cells
- term:
id: GO:0002237
label: response to molecule of bacterial origin
evidence_type: IDA
original_reference_id: PMID:17449476
review:
summary: IDA for response to molecule of bacterial origin from
PMID:17449476. IL-10 is produced in response to bacterial products.
action: KEEP_AS_NON_CORE
reason: IL-10 production is induced by bacterial products as part of the
immune response regulatory feedback loop. This describes a context for
IL-10 induction rather than a core function. Keep as non-core.
supported_by:
- reference_id: PMID:17449476
supporting_text: there is increased production of interferon-gamma and
interleukin-10, which indicates that immunity in response to Eis
treatment is skewed away from a protective T(H)1 response
- term:
id: GO:0030595
label: leukocyte chemotaxis
evidence_type: TAS
original_reference_id: PMID:9405662
review:
summary: TAS for leukocyte chemotaxis from PMID:9405662. This paper
identified functional domains on human IL-10 (also referenced for protein
sequence in UniProt).
action: KEEP_AS_NON_CORE
reason: IL-10 can modulate leukocyte chemotaxis through its effects on
chemokine production and adhesion molecule expression. PMID:9405662
studied functional domains of IL-10 including chemotactic effects. Keep as
non-core.
supported_by:
- reference_id: PMID:9405662
supporting_text: IL-10 significantly affects chemokine biology, because
human IL-10 inhibits chemokine production and is a specific chemotactic
factor for CD8+ T cells.
- term:
id: GO:0030183
label: B cell differentiation
evidence_type: NAS
original_reference_id: PMID:8228801
review:
summary: NAS for B cell differentiation from PMID:8228801. IL-10 promotes B
cell differentiation.
action: KEEP_AS_NON_CORE
reason: IL-10 promotes B cell differentiation, particularly plasma cell
differentiation. This is a well-established but non-core function of IL-10
(PMID:8228801, PMID:9184696).
supported_by:
- reference_id: PMID:8228801
supporting_text: Interleukin 10 (IL-10) has recently been shown to induce
normal human B lymphocytes to proliferate and differentiate into
immunoglobulin (Ig)-secreting cells.
- term:
id: GO:0042100
label: B cell proliferation
evidence_type: NAS
original_reference_id: PMID:8228801
review:
summary: NAS for B cell proliferation from PMID:8228801. IL-10 promotes B
cell proliferation in certain contexts.
action: KEEP_AS_NON_CORE
reason: IL-10 was originally identified as a B cell growth factor as well as
a cytokine synthesis inhibitor. It promotes B cell proliferation of
pre-activated B cells (PMID:8228801, PMID:9184696). Keep as non-core.
supported_by:
- reference_id: PMID:8228801
supporting_text: IL-2 and IL-10 were found to synergize to induce the
proliferation and differentiation of B-CLL cells.
- term:
id: GO:0045191
label: regulation of isotype switching
evidence_type: NAS
original_reference_id: PMID:8228801
review:
summary: NAS for regulation of isotype switching from PMID:8228801. IL-10
regulates immunoglobulin isotype switching in B cells.
action: KEEP_AS_NON_CORE
reason: IL-10 is known to regulate immunoglobulin isotype switching,
promoting certain isotype classes. This is a real but non-core function
related to IL-10's effects on B cells (PMID:8228801).
supported_by:
- reference_id: PMID:8228801
supporting_text: normal B cells which proliferated strongly and secreted
large amounts of IgM, IgG, and IgA.
- term:
id: GO:0005141
label: interleukin-10 receptor binding
evidence_type: NAS
original_reference_id: PMID:1847510
review:
summary: NAS for IL-10 receptor binding from PMID:1847510. This is the
seminal paper on IL-10 cDNA cloning (Vieira et al., 1991).
action: ACCEPT
reason: IL-10 receptor binding is a core molecular function. PMID:1847510 is
the original cloning paper for human IL-10 (Vieira et al., PNAS 1991) and
established IL-10 as a ligand for its receptor.
supported_by:
- reference_id: PMID:1847510
supporting_text: cDNA clones encoding human IL-10 (hIL-10) were isolated
from a tetanus toxin-specific human T-cell clone.
- term:
id: GO:0008083
label: growth factor activity
evidence_type: NAS
original_reference_id: PMID:1371884
review:
summary: NAS for growth factor activity from PMID:1371884. IL-10 was early
on characterized as having growth factor-like activity on B cells.
action: MODIFY
reason: While IL-10 does have proliferation-promoting effects on certain
cell types (B cells, mast cells), it is more accurately classified as a
cytokine than a growth factor. The term "cytokine activity" (GO:0005125)
is more appropriate. Growth factor activity implies a more general
proliferative function that does not capture IL-10's primary
immunomodulatory role.
proposed_replacement_terms:
- id: GO:0005125
label: cytokine activity
supported_by:
- reference_id: PMID:1371884
supporting_text: human and viral IL-10 stimulate DNA replication of B
lymphocytes activated either via their antigen receptor or via their
CD40 antigen.
- term:
id: GO:0030097
label: hemopoiesis
evidence_type: TAS
original_reference_id: PMID:11244051
review:
summary: TAS for hemopoiesis from PMID:11244051. IL-10 has effects on
hematopoietic cell development.
action: KEEP_AS_NON_CORE
reason: IL-10 has effects on hematopoietic cell development and
differentiation, particularly on monocyte/macrophage and B cell lineages.
This is a broad term but represents a real function. Keep as non-core.
supported_by:
- reference_id: PMID:11244051
supporting_text: multifunctional cytokine with diverse effects on most
hemopoietic cell types.
- term:
id: GO:0032687
label: negative regulation of interferon-alpha production
evidence_type: NAS
original_reference_id: PMID:9637497
review:
summary: NAS for negative regulation of IFN-alpha production from
PMID:9637497. This paper demonstrated that IL-10 reduces
IFN-alpha-producing cells and bulk IFN-alpha in response to viral
stimulation.
action: ACCEPT
reason: PMID:9637497 directly demonstrated that IL-10 suppresses IFN-alpha
production by PBMCs in response to multiple viruses (HSV-1, Sendai virus,
NDV, VSV). This is a specific and well-documented anti-inflammatory
function of IL-10.
supported_by:
- reference_id: PMID:9637497
supporting_text: Human IL-10 (hIL-10) caused reductions in both the
frequency of IFN-alpha-producing cells (IPC) and bulk IFN in response to
herpes simplex virus type-1 (HSV-1), Sendai virus, Newcastle disease
virus, and vesicular stomatitis virus.
- term:
id: GO:0042092
label: type 2 immune response
evidence_type: TAS
original_reference_id: PMID:11244051
review:
summary: TAS for type 2 immune response from PMID:11244051. IL-10 is
associated with Th2/type 2 immune responses.
action: KEEP_AS_NON_CORE
reason: IL-10 was originally identified as a Th2-derived cytokine and is
associated with type 2 immune responses. However, IL-10 is now known to be
produced by diverse immune cell types, not exclusively Th2 cells. The
association with type 2 immunity is a non-core aspect of IL-10 biology.
supported_by:
- reference_id: PMID:11244051
supporting_text: IL-10 plays a key role in differentiation and function of
a newly appreciated type of T cell, the T regulatory cell, which may
figure prominently in control of immune responses and tolerance in vivo.
- term:
id: GO:0042130
label: negative regulation of T cell proliferation
evidence_type: NAS
original_reference_id: PMID:8499633
review:
summary: NAS for negative regulation of T cell proliferation from
PMID:8499633, which directly demonstrated that IL-10 inhibits T cell
growth.
action: ACCEPT
reason: PMID:8499633 showed that IL-10 directly inhibits T cell growth
(55.4% inhibition) when stimulated with immobilized anti-CD3, even in the
absence of monocytes. This establishes a direct effect on T cells.
supported_by:
- reference_id: PMID:8499633
supporting_text: highly purified peripheral blood T cells containing less
than 0.1% CD14+ cells and unresponsive to phytohemagglutinin (PHA), were
growth-inhibited by IL-10 when stimulated with immobilized OKT3
monoclonal antibody (MoAb; 55.4% inhibition).
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: NAS
original_reference_id: PMID:8312229
review:
summary: NAS for negative regulation of apoptotic process from PMID:8312229,
which showed IL-10 inhibits apoptotic cell death in T cells starved of
IL-2.
action: KEEP_AS_NON_CORE
reason: PMID:8312229 demonstrated that IL-10 inhibits apoptosis in
IL-2-deprived T cells. This is a real but context-dependent anti-apoptotic
effect of IL-10. Keep as non-core.
supported_by:
- reference_id: PMID:8312229
supporting_text: IL-10 inhibits apoptotic cell death in human T cells
starved of IL-2.
- term:
id: GO:0045347
label: negative regulation of MHC class II biosynthetic process
evidence_type: TAS
original_reference_id: PMID:11244051
review:
summary: TAS for negative regulation of MHC class II biosynthesis from
PMID:11244051.
action: ACCEPT
reason: IL-10 downregulation of MHC class II expression is a core function,
also supported by IDA from PMID:1940799 (PMID:11244051, PMID:1940799).
supported_by:
- reference_id: PMID:11244051
supporting_text: IL-10 regulates growth and/or differentiation of B cells,
NK cells, cytotoxic and helper T cells, mast cells, granulocytes,
dendritic cells, keratinocytes, and endothelial cells.
- term:
id: GO:0005576
label: extracellular region
evidence_type: IPI
original_reference_id: PMID:33737461
review:
summary: IPI for extracellular region from PMID:33737461 (ComplexPortal).
action: ACCEPT
reason: IL-10 is a secreted protein found in the extracellular region.
Correct.
supported_by:
- reference_id: PMID:33737461
supporting_text: We used a structure-based approach to deconvolute IL-10
pleiotropy by determining the structure of the IL-10 receptor (IL-10R)
complex by cryo-electron microscopy at a resolution of 3.5 angstroms.
- term:
id: GO:0045063
label: T-helper 1 cell differentiation
evidence_type: IDA
original_reference_id: PMID:33737461
review:
summary: IDA for T-helper 1 cell differentiation from PMID:33737461
(ComplexPortal). IL-10 can influence Th1/Th2 balance.
action: KEEP_AS_NON_CORE
reason: IL-10 can influence T helper cell differentiation, particularly by
suppressing Th1 differentiation through inhibition of IL-12 and IFN-gamma
production. The annotation says Th1 differentiation, not inhibition of it,
so the qualifier from the GOA should be checked. Keep as non-core.
supported_by:
- reference_id: PMID:33737461
supporting_text: Some variants displayed myeloid-biased activity by
suppressing macrophage activation without stimulating inflammatory CD8+
T cells, thereby uncoupling the major opposing functions of IL-10.
- term:
id: GO:0002639
label: positive regulation of immunoglobulin production
evidence_type: IGI
original_reference_id: PMID:22962438
review:
summary: IGI for positive regulation of immunoglobulin production from
PMID:22962438, with genetic interaction with IL-6 (P60568).
action: KEEP_AS_NON_CORE
reason: IL-10 promotes immunoglobulin production by B cells, often in
synergy with other cytokines like IL-6. This is consistent with IL-10's B
cell-stimulatory functions. Keep as non-core.
supported_by:
- reference_id: PMID:22962438
supporting_text: CR1 inhibits the differentiation of B cells to
plasmablasts and their immunoglobulin production.
- term:
id: GO:1900100
label: positive regulation of plasma cell differentiation
evidence_type: IGI
original_reference_id: PMID:22962438
review:
summary: IGI for positive regulation of plasma cell differentiation from
PMID:22962438, with genetic interaction with IL-6 (P60568).
action: KEEP_AS_NON_CORE
reason: IL-10 promotes plasma cell differentiation, consistent with its B
cell stimulatory functions. Keep as non-core.
supported_by:
- reference_id: PMID:22962438
supporting_text: CR1 inhibits the differentiation of B cells to
plasmablasts and their immunoglobulin production.
references:
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data to
orthologs by curator judgment of sequence similarity
findings:
- statement: Some ISS annotations transfer from mouse Il10 (P18893) which is
appropriate, while others transfer from FasL/TNFSF6 (P06804) which is an
inappropriate source for IL-10 annotations due to completely different
function.
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings:
- statement: IBA annotations for IL-10 are well-supported and represent core
functions.
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data
to orthologs using Ensembl Compara
findings:
- statement: Many IEA transfers from rat Il10 (P29456) represent peripheral
observations (response to xenobiotic, activity, inactivity, carbon
monoxide, insulin, estradiol) that are over-annotations for human IL-10
core function.
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings:
- statement: IEA annotations for core functions (cytokine activity,
extracellular space, immune response, TNF regulation) are correct.
- id: PMID:1940799
title: "Interleukin 10(IL-10) inhibits cytokine synthesis by human monocytes: an autoregulatory role of IL-10 produced by monocytes."
findings:
- statement: Seminal paper establishing IL-10 as a cytokine synthesis
inhibitor.
supporting_text: IL-10, added to monocytes, activated by interferon gamma
(IFN-gamma), LPS, or combinations of LPS and IFN-gamma at the onset of the
cultures, strongly inhibited the production of IL-1 alpha, IL-1 beta,
IL-6, IL-8, TNF alpha, GM-CSF, and G-CSF at the transcriptional level.
reference_section_type: ABSTRACT
- statement: Demonstrated inhibition of cytokine production and MHC class II
expression.
supporting_text: IL-10, added to monocytes, activated by interferon gamma
(IFN-gamma), LPS, or combinations of LPS and IFN-gamma at the onset of the
cultures, strongly inhibited the production of IL-1 alpha, IL-1 beta,
IL-6, IL-8, TNF alpha, GM-CSF, and G-CSF at the transcriptional level.
reference_section_type: ABSTRACT
- id: PMID:7749983
title: Cross-linking of OX40 ligand, a member of the TNF/NGF cytokine family,
induces proliferation and differentiation in murine splenic B cells
findings:
- statement: This paper is about OX40L (TNFSF4), NOT about IL-10. Two IDA
annotations cite this paper for IL-10, which appears to be a reference
error.
supporting_text: OX40 is a member of the TNF/NGF-receptor family expressed
on activated T cells, whose ligand is found on activated T and B cells.
reference_section_type: ABSTRACT
- id: PMID:8312229
title: IL-10 inhibits apoptotic cell death in human T cells starved of IL-2
findings:
- statement: IL-10 inhibits apoptosis in IL-2-deprived T cells.
supporting_text: IL-10 inhibits apoptotic cell death in human T cells
starved of IL-2.
reference_section_type: TITLE
- id: PMID:8499633
title: Human interleukin-10 can directly inhibit T-cell growth
findings:
- statement: IL-10 directly inhibits T cell growth (55.4% inhibition with
anti-CD3).
supporting_text: Highly purified peripheral blood T cells containing less
than 0.1% CD14+ cells and unresponsive to phytohemagglutinin (PHA), were
growth-inhibited by IL-10 when stimulated with immobilized OKT3 monoclonal
antibody (MoAb; 55.4% inhibition).
reference_section_type: ABSTRACT
- statement: Effect is independent of monocytes.
supporting_text: Thus, IL-10 can directly inhibit growth and IL-2 production
in T cells triggered by immobilized OKT3 MoAb in the absence of monocytes.
reference_section_type: ABSTRACT
- id: PMID:9184696
title: The apoptosis and proliferation of SAC-activated B cells by IL-10 are
associated with changes in Bcl-2, Bcl-xL, and Mcl-1 expression
findings:
- statement: IL-10 has dual effects on B cells depending on activation state
-- apoptosis at initiation versus proliferation after pre-activation.
supporting_text: the addition of IL-10 at the initiation of activation
down-regulated Bcl-xL, Bcl-2, and Mcl-1 expression. At the same time, B
cell proliferation was inhibited and apoptotic cell number increased,
suggesting the growth arrest and/or apoptosis of B cells.
reference_section_type: ABSTRACT
- statement: In contrast, IL-10 supported proliferation and differentiation of
pre-activated B cells.
supporting_text: In contrast, IL-10 failed to down-regulate the Bcl-xL and
Bcl-2 expression but rather augmented the expression of Mcl-1 of B cells
after preactivation for 48 hr with SAC and IL-2
reference_section_type: ABSTRACT
- id: PMID:9637497
title: Exogenous and endogenous IL-10 regulate IFN-alpha production by
peripheral blood mononuclear cells in response to viral stimulation
findings:
- statement: IL-10 reduces frequency of IFN-alpha-producing cells and bulk
IFN-alpha.
supporting_text: Human IL-10 (hIL-10) caused reductions in both the
frequency of IFN-alpha-producing cells (IPC) and bulk IFN in response to
herpes simplex virus type-1 (HSV-1), Sendai virus, Newcastle disease
virus, and vesicular stomatitis virus.
reference_section_type: ABSTRACT
- statement: Effect seen with HSV-1, Sendai virus, NDV, and VSV stimulation.
supporting_text: Human IL-10 (hIL-10) caused reductions in both the
frequency of IFN-alpha-producing cells (IPC) and bulk IFN in response to
herpes simplex virus type-1 (HSV-1), Sendai virus, Newcastle disease
virus, and vesicular stomatitis virus.
reference_section_type: ABSTRACT
- id: PMID:10443688
title: Tumor necrosis factor alpha decreases, and interleukin-10 increases,
the sensitivity of human monocytes to dexamethasone; potential regulation of
the glucocorticoid receptor.
findings:
- statement: IL-10 increases the sensitivity of human monocytes to
dexamethasone and enhances glucocorticoid receptor concentration,
supporting IL-10 anti-inflammatory synergy with glucocorticoids.
supporting_text: Pretreatment with TNFalpha diminished, and with IL-10
improved, the ability of dexamethasone to suppress IL-6 secretion in
whole-blood cell cultures (P < 0.01 for both) and to enhance IL-1 receptor
antagonist secretion by U937 cells (P < 0.05 for both).
reference_section_type: ABSTRACT
- statement: IL-10 increased the concentration of dexamethasone binding sites
(glucocorticoid receptor) in monocytes.
supporting_text: TNFalpha decreased (P < 0.001), while IL-10 increased (P <
0.001), the concentration of dexamethasone binding sites in these cells,
with no discernible effect on their binding affinity.
reference_section_type: ABSTRACT
- id: PMID:14971032
title: Interleukin 10 regulates cell surface and soluble LIR-2 (CD85d)
expression on dendritic cells resulting in T cell hyporesponsiveness in
vitro
findings:
- statement: IL-10 upregulates LIR-2 on DCs.
supporting_text: the inhibitory receptor LIR-2 (leukocyte
immunoglobulin-like receptor-2, CD85d) is specifically up-regulated by
IL-10 on maturing human DC
reference_section_type: ABSTRACT
- statement: Results in T cell hyporesponsiveness.
supporting_text: IL-10 renders DC hypostimulatory by up-regulating cell
surface LIR-2 and by inhibiting soluble LIR-2 in vitro
reference_section_type: ABSTRACT
- id: PMID:16982608
title: Conformational changes mediate interleukin-10 receptor 2 (IL-10R2)
binding to IL-10 and assembly of the signaling complex.
findings:
- statement: Key reference for IL-10 receptor interaction and JAK-STAT
signaling.
supporting_text: Interleukin-10 receptor 2 (IL-10R2) is a critical component
of the IL-10.IL-10R1.IL-10R2 complex which regulates IL-10-mediated
immunomodulatory responses
reference_section_type: ABSTRACT
- statement: Used for protein dimerization, receptor binding, and signaling
annotations.
supporting_text: The ternary IL-10 signaling complex is assembled in a
sequential order with the IL-10.IL-10R1 interaction occurring first
followed by engagement of the IL-10R2 chain.
reference_section_type: ABSTRACT
- id: PMID:19262501
title: A novel regulatory B-cell population in sheep Peyer's patches
spontaneously secretes IL-10 and downregulates TLR9-induced IFNalpha
responses
findings:
- statement: B cells secrete IL-10 that suppresses multiple pro-inflammatory
cytokines.
supporting_text: PP cells spontaneously secreted high levels of IL-10, and
the primary source of the IL-10 was resting CD5(-)CD11c(-)CD21(+) B cells.
reference_section_type: ABSTRACT
- statement: Supports TAS annotations for specific cytokine suppression.
supporting_text: Neutralization of the IL-10 or depletion of CD21(+) B cells
resulted in a significant increase in CpG-induced IFNalpha-response in
PPs, suggesting that IL-10 from B cells regulate innate responses in PPs.
reference_section_type: ABSTRACT
- id: PMID:26962683
title: IL10 inhibits starvation-induced autophagy in hypertrophic scar
fibroblasts via cross talk between the IL10-IL10R-STAT3 and IL10-AKT-mTOR
pathways
findings:
- statement: IL-10 inhibits autophagy via STAT3/AKT-mTOR crosstalk.
supporting_text: IL10 inhibited starvation-induced autophagy and induced the
expression of p-AKT and p-STAT3 in HSFs in a dose-dependent manner.
reference_section_type: ABSTRACT
- statement: Context-specific effect in hypertrophic scar fibroblasts.
supporting_text: IL10 inhibits starvation-induced autophagy in hypertrophic
scar fibroblasts via cross talk between the IL10-IL10R-STAT3 and
IL10-AKT-mTOR pathways.
reference_section_type: TITLE
- id: PMID:32296183
title: A reference map of the human binary protein interactome
findings:
- statement: HuRI high-throughput Y2H screen.
supporting_text: With approximately 53,000 protein-protein interactions,
HuRI has approximately four times as many such interactions as there are
high-quality curated interactions from small-scale studies.
reference_section_type: ABSTRACT
- statement: Interactions with keratins and other non-immune proteins are
likely false positives for a secreted cytokine.
supporting_text: we expect HuRI to be depleted for PPIs that depend on
post-translational processing of human proteins that the yeast cell is
unable to catalyze or that require additional partners to stabilize the
interaction.
reference_section_type: DISCUSSION
- id: PMID:11244051
title: Interleukin-10 and the interleukin-10 receptor.
findings:
- statement: Referenced for hemopoiesis, type 2 immune response, and MHC class
II regulation annotations.
supporting_text: Interleukin-10 (IL-10), first recognized for its ability to
inhibit activation and effector function of T cells, monocytes, and
macrophages, is a multifunctional cytokine with diverse effects on most
hemopoietic cell types.
reference_section_type: ABSTRACT
- id: PMID:1847510
title: "Isolation and expression of human cytokine synthesis inhibitory factor cDNA clones: homology to Epstein-Barr virus open reading frame BCRFI."
findings:
- statement: Seminal paper cloning human IL-10 cDNA.
supporting_text: cDNA clones encoding human IL-10 (hIL-10) were isolated
from a tetanus toxin-specific human T-cell clone.
reference_section_type: ABSTRACT
- id: PMID:8228801
title: Interleukin 10 (IL-10) upregulates functional high affinity IL-2
receptors on normal and leukemic B lymphocytes.
findings:
- statement: B cell differentiation, proliferation, and isotype switching
regulation by IL-10.
supporting_text: Interleukin 10 (IL-10) has recently been shown to induce
normal human B lymphocytes to proliferate and differentiate into
immunoglobulin (Ig)-secreting cells.
reference_section_type: ABSTRACT
- id: PMID:9405662
title: Identification of functional domains on human interleukin 10
findings:
- statement: Mapped functional domains on IL-10 including chemotaxis-related
regions.
supporting_text: human IL-10 inhibits chemokine production and is a specific
chemotactic factor for CD8+ T cells
reference_section_type: ABSTRACT
- id: Reactome:R-HSA-449803
title: IL10 dimer binds IL10RA:JAK1
findings: []
- id: Reactome:R-HSA-449811
title: IL10 dimer:2xIL10RA1:JAK1 binds IL10RB:TYK2
findings: []
- id: Reactome:R-HSA-449855
title: IL10 dimerizes
findings: []
- id: Reactome:R-HSA-6784006
title: STAT3 is phosphorylated by p-Y-JAK1,P-Y-TYK2
findings: []
- id: Reactome:R-HSA-6784319
title: JAK1,TYK2 phosphorylate JAK1,TYK2
findings: []
- id: Reactome:R-HSA-6784323
title: IL10 dimer:2xp-Y-IL10RA:p-Y-JAK1:2xIL10RB:p-Y-TYK2 binds STAT3
findings: []
- id: Reactome:R-HSA-6784324
title: p-Y-JAK1,p-Y-TYK2 phosphorylate IL10RA
findings: []
- id: Reactome:R-HSA-6784791
title: p-Y705-STAT3 dissociates from IL10
dimer:2xp-Y-IL10RA:p-Y-JAK1:2xIL10RB:p-Y-TYK2:p-Y705-STAT3
findings: []
- id: Reactome:R-HSA-6789615
title: Expression of STAT3-upregulated extracellular proteins
findings: []
- id: Reactome:R-HSA-8981073
title: Expression of Interleukin-10
findings: []
- id: Reactome:R-HSA-9664346
title: IL10 gene produces IL10 protein
findings: []
- id: PMID:11485736
title: Crystal structure of the IL-10/IL-10R1 complex reveals a shared
receptor binding site.
findings:
- statement: Structural basis of IL-10 binding to IL-10R1 (IL-10RA).
supporting_text: Interleukin 10 (IL-10) is a dimeric cytokine that plays a
central role in suppressing inflammatory responses. These activities are
dependent on the interaction of IL-10 with its high-affinity receptor
(IL-10R1).
reference_section_type: ABSTRACT
- id: PMID:12513909
title: Comparison of interleukin-22 and interleukin-10 soluble receptor
complexes.
findings:
- statement: Compares IL-22 and IL-10 receptor complex formation.
supporting_text: IL-22 and IL-10 require different ligand-specific receptor
chains (IL-22R and IL-10R1) but share a second receptor chain (IL-10R2) to
initiate cellular responses.
reference_section_type: ABSTRACT
- id: PMID:15837194
title: Same structure, different function crystal structure of the
Epstein-Barr virus IL-10 bound to the soluble IL-10R1 chain.
findings:
- statement: Crystal structure of EBV IL-10 bound to IL-10R1, informing human
IL-10/receptor interaction.
supporting_text: These functional differences have been correlated with the
approximately 1000-fold lower affinity of vIL-10, compared to hIL-10, for
the IL-10R1 receptor chain.
reference_section_type: ABSTRACT
- id: PMID:20462497
title: Structure and mechanism of receptor sharing by the IL-10R2 common
chain.
findings:
- statement: Structural basis for IL-10R2 (IL-10RB) sharing among IL-10 family
cytokines.
supporting_text: IL-10R2 is a shared cell surface receptor required for the
activation of five class 2 cytokines (IL-10, IL-22, IL-26, IL-28, and
IL-29) that play critical roles in host defense.
reference_section_type: ABSTRACT
- id: PMID:35443184
title: Human IL-10-producing B cells have diverse states that are induced from
multiple B cell subsets.
findings:
- statement: Characterizes diverse IL-10-producing B cell populations.
supporting_text: Regulatory B cells (Bregs) suppress immune responses
through the secretion of interleukin-10 (IL-10).
reference_section_type: ABSTRACT
- id: PMID:24994464
title: Low IL10 serum levels as key factor for predicting the sustained
virological response to IFNα/ribavirin in Brazilian patients with HCV
carrying IL28B CT/TT genotype.
findings:
- statement: Measures IL-10 serum levels in HCV patients, confirming IL-10 as
a circulating cytokine.
supporting_text: the levels of IL10 seem to influence response to IFNα/RIB
therapy
reference_section_type: ABSTRACT
- id: PMID:23071313
title: IL-10-induced microRNA-187 negatively regulates TNF-α, IL-6, and
IL-12p40 production in TLR4-stimulated monocytes.
findings:
- statement: IL-10 induces miR-187 which suppresses pro-inflammatory cytokine
production.
supporting_text: we identify miR-187 as an IL-10-dependent miRNA playing a
role in IL-10-mediated suppression of TNF-α, IL-6, and the p40 subunit of
IL-12
reference_section_type: ABSTRACT
- id: PMID:16606666
title: B7-H4 expression identifies a novel suppressive macrophage population
in human ovarian carcinoma.
findings:
- statement: IL-6 and IL-10 in the tumor microenvironment stimulate macrophage
B7-H4 expression, contributing to immunosuppression.
supporting_text: Interleukin (IL)-6 and IL-10 are found in high
concentrations in the tumor microenvironment. These cytokines stimulate
macrophage B7-H4 expression.
reference_section_type: ABSTRACT
- id: PMID:17875732
title: Relationship between B7-H4, regulatory T cells, and patient outcome in
human ovarian carcinoma.
findings:
- statement: Treg cells enable macrophages to produce IL-10 and IL-6, which in
turn stimulate B7-H4 expression on macrophages in an autocrine manner.
supporting_text: Tumor Treg cells enabled macrophages to spontaneously
produce interleukin (IL)-10 and IL-6. Tumor macrophages stimulated B7-H4
expression in an autocrine manner through IL-10 and IL-6.
reference_section_type: ABSTRACT
- id: PMID:33737461
title: Structure-based decoupling of the pro- and anti-inflammatory functions
of interleukin-10.
findings:
- statement: Decouples IL-10 pro- and anti-inflammatory functions through
structural analysis.
supporting_text: IL-10 variants with a range of IL-10Rβ binding strengths
uncovered substantial differences in response thresholds across immune
cell populations, providing a means of manipulating IL-10 cell type
selectivity.
reference_section_type: ABSTRACT
- id: PMID:31611251
title: Biology and therapeutic potential of interleukin-10.
findings:
- statement: Comprehensive review of IL-10 biology and therapeutic
applications.
supporting_text: The cytokine IL-10 is a key anti-inflammatory mediator
ensuring protection of a host from over-exuberant responses to pathogens
and microbiota, while playing important roles in other settings as sterile
wound healing, autoimmunity, cancer, and homeostasis.
reference_section_type: ABSTRACT
- id: PMID:21857966
title: WNT5A signaling contributes to Aβ-induced neuroinflammation and
neurotoxicity.
findings:
- statement: IL-10 referenced as anti-inflammatory cytokine in
neuroinflammation context.
supporting_text: activation of Wnt5a signaling elicited the expression of
proinflammatory cytokines IL-1β and TNF-α whereas inhibition of Wnt5a
signaling attenuated the Aβ-induced expression of the cytokines in
cortical cultures.
reference_section_type: ABSTRACT
- id: PMID:21323571
title: Pro/anti-inflammatory cytokines in the pathogenesis of premature
coronary artery disease.
findings:
- statement: IL-10 measured as anti-inflammatory cytokine in coronary artery
disease.
supporting_text: Proinflammatory interleukin-18 (IL-18), high-sensitivity
C-reactive protein (hS-CRP), tumor necrosis factor-alpha (TNF-alpha), and
anti-inflammatory IL-10 are involved in the pathogenesis of
atherosclerosis.
reference_section_type: ABSTRACT
- id: PMID:16034134
title: IL-4 and IL-13 induce protection of porcine endothelial cells from
killing by human complement and from apoptosis through activation of a
phosphatidylinositide 3-kinase/Akt pathway.
findings:
- statement: IL-10 tested as negative control; does not protect endothelial
cells from complement or apoptosis.
supporting_text: porcine EC incubated with IL-4 or IL-13, but not with IL-10
or IL-11, became protected from killing by complement and apoptosis
induced by TNF-alpha plus cycloheximide.
reference_section_type: ABSTRACT
- id: PMID:9847016
title: Human interleukin 10 suppresses production of inflammatory mediators by
LPS-stimulated equine peritoneal macrophages.
findings:
- statement: IL-10 suppresses inflammatory mediator production in
LPS-stimulated macrophages.
supporting_text: Preincubation of LPS-stimulated peritoneal macrophages with
rhuIL-10 caused significant (P<0.05) reduction in secretion of TNF, IL-6,
and PGE2, in a dose-dependent manner.
reference_section_type: ABSTRACT
- id: PMID:18383040
title: Interleukin-10 regulates TNF-alpha-converting enzyme (TACE/ADAM-17)
involving a TIMP-3 dependent and independent mechanism.
findings:
- statement: IL-10 regulates TACE/ADAM-17 ectodomain proteolysis activity.
supporting_text: In the presence of IL-10, TNF-alpha production and
activation of surface TACE was significantly inhibited.
reference_section_type: ABSTRACT
- id: PMID:17449476
title: Eis (enhanced intracellular survival) protein of Mycobacterium
tuberculosis disturbs the cross regulation of T-cells.
findings:
- statement: IL-10 involved in T cell cross-regulation during M. tuberculosis
infection.
supporting_text: Treatment of T-cells with Eis inhibits ERK1/2, JAK pathway,
and subsequent production of tumor necrosis factor-alpha and
interleukin-4. On the contrary, there is increased production of
interferon-gamma and interleukin-10
reference_section_type: ABSTRACT
- id: PMID:1371884
title: Interleukin 10 is a potent growth and differentiation factor for
activated human B lymphocytes.
findings:
- statement: IL-10 identified as a potent growth and differentiation factor
for activated B cells.
supporting_text: human and viral IL-10 stimulate DNA replication of B
lymphocytes activated either via their antigen receptor or via their CD40
antigen.
reference_section_type: ABSTRACT
- id: PMID:22962438
title: Complement receptor type 1 (CR1, CD35) is a potent inhibitor of B-cell
functions in rheumatoid arthritis patients.
findings:
- statement: IL-10 and IL-6 genetic interaction in B cell function and
immunoglobulin/plasma cell differentiation.
supporting_text: Besides blocking B-cell receptor-induced proliferation, CR1
inhibits the differentiation of B cells to plasmablasts and their
immunoglobulin production.
reference_section_type: ABSTRACT
- id: file:human/IL10/IL10-deep-research-falcon.md
title: Deep research synthesis of IL-10 literature
findings: []
core_functions:
- description: IL-10 binds its receptor complex comprising IL-10RA
(ligand-binding) and IL-10RB (signal-transducing). This is the primary
molecular function through which IL-10 initiates all downstream signaling.
Supported by NAS (PMID:1847510), IEA, and structural studies
(PMID:16982608).
molecular_function:
id: GO:0005141
label: interleukin-10 receptor binding
directly_involved_in:
- id: GO:0140105
label: interleukin-10-mediated signaling pathway
- id: GO:0046427
label: positive regulation of receptor signaling pathway via JAK-STAT
locations:
- id: GO:0005576
label: extracellular region
supported_by:
- reference_id: PMID:1847510
supporting_text: Seminal paper cloning human IL-10 cDNA and establishing
receptor binding.
full_text_unavailable: true
- reference_id: PMID:16982608
supporting_text: Structural and signaling study of IL-10 receptor
interaction.
full_text_unavailable: true
- description: IL-10 is the prototypical anti-inflammatory cytokine. Cytokine
activity is supported by IBA, IDA (PMID:24994464), NAS (PMID:10443688), and
IEA evidence.
molecular_function:
id: GO:0005125
label: cytokine activity
directly_involved_in:
- id: GO:0050728
label: negative regulation of inflammatory response
- id: GO:0006955
label: immune response
locations:
- id: GO:0005576
label: extracellular region
supported_by:
- reference_id: PMID:1940799
supporting_text: IL-10, added to monocytes, strongly inhibited the
production of IL-1 alpha, IL-1 beta, IL-6, IL-8, TNF alpha, GM-CSF, and
G-CSF at the transcriptional level.
full_text_unavailable: true
- reference_id: PMID:10443688
supporting_text: Key primary study supporting IL-10 cytokine activity and
anti-inflammatory function.
full_text_unavailable: true