IL2RA (CD25, p55, TAC antigen) encodes the alpha subunit of the interleukin-2 receptor. IL2RA is a type I transmembrane glycoprotein containing two Sushi/CCP (complement control protein) domains in its extracellular region. It binds IL-2 with low affinity (Kd ~10 nM) on its own, but its primary role is to capture IL-2 and present it to the signaling-competent IL-2Rbeta/gammac heterodimer, thereby forming the high-affinity trimeric receptor complex (Kd ~10 pM). IL2RA itself has a very short cytoplasmic tail (13 residues) and does not directly transduce signals. It is constitutively expressed on FOXP3+ regulatory T cells (Tregs) and is induced on activated conventional T cells. By enabling Tregs to respond to very low concentrations of IL-2, IL2RA is critical for immune tolerance and T cell homeostasis. Loss-of-function mutations cause immunodeficiency with lymphoproliferation and autoimmunity (IMD41), and common variants at the IL2RA locus are associated with type 1 diabetes and multiple sclerosis susceptibility.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0006954
inflammatory response
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: IBA annotation to inflammatory response based on phylogenetic inference. IL2RA is part of the IL-2 signaling axis that regulates immune responses, and loss of CD25 leads to autoimmune inflammatory disease (PMID:23416241, PMID:9096364). However, IL2RA itself is a receptor subunit rather than a direct inflammatory mediator. The inflammatory phenotype arises indirectly from loss of immune tolerance. The IBA annotation is at an appropriate level of generality given that IL-2 signaling through this receptor modulates inflammatory processes.
Reason: IL2RA participates in inflammatory response indirectly by controlling IL-2 signaling and Treg function. Loss of CD25 leads to severe inflammation and autoimmunity (PMID:23416241), confirming involvement. However, this is not the core molecular function of IL2RA; it is a downstream consequence of its receptor role. The IBA annotation is phylogenetically supported and reasonable as a non-core annotation.
Supporting Evidence:
PMID:23416241
The chronic effect of this mutation led to the development of progressive manifestations of both autoimmunity, such as enteropathy, erythrodermia and severe alopecia, and immunodeficiency with chronic CMV infection.
PMID:9096364
Extensive lymphocytic infiltration of tissues, including lung, liver, gut, and bone, is observed, accompanied by tissue atrophy and inflammation.
|
|
GO:0019976
interleukin-2 binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: IBA annotation for interleukin-2 binding based on phylogenetic inference. This is a well-established core function of IL2RA. The crystal structure of the quaternary complex (PMID:16293754, PMID:16477002) shows IL2RA forms the largest interface with IL-2 among the three receptor chains, consistent with its role in initial IL-2 capture. IL2RA alone binds IL-2 with ~10 nM affinity.
Reason: IL-2 binding is the primary molecular function of IL2RA. Structural studies demonstrate extensive direct contacts between IL2RA and IL-2 (PMID:16477002, PMID:16293754). The IBA annotation is accurate and well-supported.
Supporting Evidence:
PMID:16477002
The IL-2R alpha subunit forms the largest of the three IL-2/IL-2R interfaces, which, together with the high abundance of charge-charge interactions, correlates well with the rapid association rate and high-affinity interaction of IL-2R alpha with IL-2 at the cell surface.
PMID:16293754
the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding site for presentation to IL-2Rbeta.
|
|
GO:0002376
immune system process
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: IEA annotation from UniProtKB keyword mapping (Immunity). IL2RA is clearly an immune system component. This is a very broad term that is subsumed by more specific annotations already present.
Reason: Correct but very general. IL2RA is unambiguously involved in immune system processes. This broad IEA annotation is acceptable as a general umbrella even though more specific annotations exist.
|
|
GO:0002682
regulation of immune system process
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: IEA annotation from ARBA model. IL2RA is central to the regulation of immune responses through its role in the IL-2 receptor complex. It controls Treg function and effector T cell expansion, which are key immune regulatory processes (PMID:23416241).
Reason: Appropriate general annotation. IL2RA is a key regulator of immune system processes through its role in IL-2 signaling and Treg homeostasis. More specific annotations exist (e.g., regulation of T cell tolerance induction), so this broader term is also acceptable.
Supporting Evidence:
PMID:23416241
In conclusion, we show that CD25 expression is required to maintain immune homeostasis, and CD25 deficiency is a distinct immunological disease that leads to both an autoimmune and immunodeficiency syndrome that clinically resembles IPEX syndrome.
|
|
GO:0004911
interleukin-2 receptor activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for IL-2 receptor activity from combined automated methods. This is a core function of IL2RA. Note that IL2RA contributes_to this activity as part of the trimeric complex, since the alpha chain alone does not transduce signal.
Reason: Correct. IL2RA is an essential component of the IL-2 receptor complex. This IEA annotation is concordant with the IDA and IMP annotations for the same term.
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: IEA annotation for plasma membrane localization from ARBA. IL2RA is a type I transmembrane protein that functions at the plasma membrane (UniProt: Membrane; Single-pass type I membrane protein).
Reason: Correct. IL2RA is a well-established plasma membrane protein. This is concordant with multiple other annotations for the same term from different evidence codes.
|
|
GO:0006915
apoptotic process
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: IEA annotation for apoptotic process from ARBA. IL-2 signaling through the IL-2 receptor can influence apoptosis (IL-2 withdrawal leads to apoptosis; CD25 deficiency affects bcl-2 expression in thymocytes per PMID:9096364). However, IL2RA is not a direct apoptosis regulator; its connection to apoptosis is indirect through modulation of IL-2 signaling strength.
Reason: IL2RA does not directly regulate apoptosis. The connection is indirect: IL-2 signaling promotes survival via STAT5/bcl-2, and its withdrawal can lead to apoptosis. The CD25-deficient patient thymocytes showed altered bcl-2 levels (PMID:9096364), but this is a downstream consequence of impaired IL-2 signaling, not a direct function of IL2RA. This is an over-annotation of a pleiotropic downstream effect.
Supporting Evidence:
PMID:9096364
CD25-deficient cortical thymocytes do not express CD1, and furthermore they fail to normally down-regulate levels of the anti-apoptotic protein bcl-2.
|
|
GO:0006955
immune response
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: IEA annotation for immune response from ARBA. IL2RA is clearly involved in immune responses as a component of the IL-2 receptor on T cells and other immune cells.
Reason: Correct general annotation. IL2RA is an integral part of the immune response machinery. This is broader than the more specific annotations but acceptable.
|
|
GO:0016020
membrane
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: IEA annotation for membrane localization from UniProtKB subcellular location mapping. IL2RA is a transmembrane protein. This is a very generic CC annotation; more specific plasma membrane annotations exist.
Reason: Correct but very generic. Subsumed by the more specific plasma membrane annotations. Acceptable as an IEA.
|
|
GO:0019976
interleukin-2 binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: IEA annotation for interleukin-2 binding from combined automated methods. Duplicate of the IBA annotation for the same GO term. IL-2 binding is a well-established core function of IL2RA.
Reason: Correct. IL2RA directly binds IL-2. This IEA annotation is concordant with the IBA annotation. Duplicate GO IDs from different evidence sources are acceptable.
|
|
GO:0005515
protein binding
|
IPI
PMID:16477002 Crystal structure of the IL-2 signaling complex: paradigm fo... |
MODIFY |
Summary: IPI annotation for protein binding based on the crystal structure of the IL-2 signaling complex (PMID:16477002). The interacting partner is IL-2 (UniProtKB:P60568). While the physical interaction is real and demonstrated by crystallography, the term 'protein binding' is uninformative. The more specific term 'interleukin-2 binding' (GO:0019976) already captures this interaction more precisely.
Reason: The term 'protein binding' is uninformative per curation guidelines. The crystal structure demonstrates direct IL2RA:IL-2 binding (PMID:16477002), which is better captured by GO:0019976 (interleukin-2 binding). The with/from column shows UniProtKB:P60568 (IL-2), confirming the specific interaction.
Proposed replacements:
interleukin-2 binding
Supporting Evidence:
PMID:16477002
IL-2 is a cytokine that functions as a growth factor and central regulator in the immune system and mediates its effects through ligand-induced hetero-trimerization of the receptor subunits IL-2R alpha, IL-2R beta, and gamma(c). Here, we describe the crystal structure of the trimeric assembly of the human IL-2 receptor ectodomains in complex with IL-2 at 3.0 A resolution.
|
|
GO:0005515
protein binding
|
IPI
PMID:17032757 Hot-spot mimicry of a cytokine receptor by a small molecule. |
MODIFY |
Summary: IPI annotation for protein binding based on PMID:17032757 (Thanos et al. 2006), which describes a small molecule (SP4206) that mimics IL2RA in binding IL-2. The with/from column indicates UniProtKB:P60568 (IL-2). This study indirectly demonstrates IL2RA-IL-2 interaction by showing a small molecule mimics IL2RA hot-spot contacts on IL-2. Again, 'protein binding' is uninformative.
Reason: Same issue as above: 'protein binding' is too generic. The underlying interaction is IL2RA binding to IL-2, better captured by GO:0019976. PMID:17032757 validates the IL2RA:IL-2 binding interface through small molecule mimicry studies.
Proposed replacements:
interleukin-2 binding
Supporting Evidence:
PMID:17032757
a high-affinity small molecule, SP4206 (Kd approximately 70 nM), was found to block binding of the IL-2alpha receptor (IL-2Ralpha) to IL-2 (Kd approximately 10 nM).
|
|
GO:0002437
inflammatory response to antigenic stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA is involved in immune responses including inflammation following antigenic stimulation. However, this is an overly specific downstream biological process; IL2RA does not directly mediate inflammatory responses to antigens. Its role is in modulating IL-2 signaling sensitivity, which indirectly affects inflammatory outcomes.
Reason: IL2RA does not directly drive inflammatory responses to antigenic stimuli. Its role is to capture IL-2 and form the high-affinity receptor. Inflammatory consequences are downstream and indirect. This term is too specific for the actual role of IL2RA.
|
|
GO:0009897
external side of plasma membrane
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA annotation from Ensembl Compara ortholog transfer (mouse IL2RA). IL2RA is a type I transmembrane protein with its Sushi/CCP domains exposed on the external side of the plasma membrane, where it captures IL-2. This is accurate and more specific than the generic plasma membrane annotation.
Reason: Correct and more informative than generic plasma membrane. The IL-2 binding domain of IL2RA (extracellular region, residues 22-240) is on the external side of the plasma membrane (UniProt topology annotation).
|
|
GO:0009986
cell surface
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA is well-established as a cell surface receptor, detectable by flow cytometry with anti-CD25 antibodies on T cells and other immune cells (PMID:23416241).
Reason: Correct. IL2RA/CD25 is a canonical cell surface marker widely used in immunology.
Supporting Evidence:
PMID:23416241
Cell-surface CD25 expression is critical for maintaining immune function and homeostasis.
|
|
GO:0042102
positive regulation of T cell proliferation
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA enables high-affinity IL-2 signaling, which drives T cell proliferation. PMID:22446627 demonstrates that CD25 expression enhances IL-2-driven T cell proliferation, and PMID:23416241 shows CD25-null T cells have impaired proliferative responses.
Reason: IL2RA contributes to T cell proliferation by enabling high-affinity IL-2 signaling. However, this is a downstream biological consequence rather than the core molecular function. The CD25-null patient study shows impaired polyclonal proliferative responses (PMID:23416241), confirming IL2RA's role, but the proliferative effect is mediated by IL2RB/IL2RG signaling.
Supporting Evidence:
PMID:23416241
The patient's PBMCs had poor in vitro proliferation response to TCR-mediated activation compared to healthy controls (Fig
PMID:22446627
The principle functional effect of IL-2 is to promote T cell proliferation, particularly for naΓ―ve T cells.
|
|
GO:0045582
positive regulation of T cell differentiation
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA/CD25 promotes Treg differentiation and maintenance by enabling high-affinity IL-2 signaling, which drives STAT5-dependent FOXP3 transcription. The deep research review confirms that CD25 expression determines which cells respond to low IL-2 levels and differentiate appropriately.
Reason: IL2RA contributes to T cell differentiation (especially Treg differentiation) by enabling high-affinity IL-2 signaling. However, differentiation is a downstream process mediated by intracellular signaling through IL2RB/IL2RG, not directly by IL2RA. This is a biologically important but non-core function.
|
|
GO:0007259
cell surface receptor signaling pathway via JAK-STAT
|
NAS
PMID:22446627 Exploiting a natural conformational switch to engineer an in... |
KEEP AS NON CORE |
Summary: NAS annotation for JAK-STAT signaling from ComplexPortal, citing the IL-2 superkine paper (PMID:22446627). IL-2 signaling through the trimeric receptor activates JAK1/JAK3 and STAT5. While IL2RA contributes to this pathway by forming the high-affinity receptor, it does not itself signal via JAK-STAT; the signaling is mediated by IL2RB and IL2RG (which bind JAK1 and JAK3 respectively).
Reason: IL2RA participates in the IL-2 receptor complex that signals via JAK-STAT, but JAK-STAT signaling is transduced by IL2RB (JAK1) and IL2RG (JAK3), not by IL2RA. IL2RA's 13-residue cytoplasmic tail has no signaling capacity. This annotation is acceptable as a non-core annotation since IL2RA is part of the complex, but the signaling itself is not a direct function of IL2RA.
Supporting Evidence:
PMID:22446627
On activated T cells, IL-2 signals through a quaternary 'high affinity' receptor complex consisting of IL-2, IL-2Ralpha (termed CD25), IL-2Rbeta and IL-2Rgamma.
|
|
GO:0038110
interleukin-2-mediated signaling pathway
|
NAS
PMID:22446627 Exploiting a natural conformational switch to engineer an in... |
ACCEPT |
Summary: NAS annotation for IL-2-mediated signaling pathway from ComplexPortal, citing PMID:22446627. IL2RA is essential for high-affinity IL-2 signaling by forming the trimeric receptor complex. The superkine study demonstrates that CD25 expression determines cell sensitivity to IL-2 signaling.
Reason: IL2RA is a critical component of the IL-2 signaling pathway. Without CD25, cells respond only to high IL-2 concentrations via the intermediate-affinity IL2RB/IL2RG receptor. This annotation is a core function of IL2RA.
Supporting Evidence:
PMID:22446627
Naive T cells express only a low density of IL-2Rbeta and IL-2Rgamma, and are therefore relatively insensitive to IL-2, but acquire sensitivity after CD25 expression, which captures the cytokine and presents it to IL-2Rbeta and IL-2Rgamma.
|
|
GO:0070665
positive regulation of leukocyte proliferation
|
NAS
PMID:22446627 Exploiting a natural conformational switch to engineer an in... |
KEEP AS NON CORE |
Summary: NAS annotation for positive regulation of leukocyte proliferation from ComplexPortal. IL2RA enables high-affinity IL-2 signaling that drives T cell and other leukocyte proliferation. This is a broader parent term of T cell proliferation.
Reason: This is a biologically relevant but broad downstream consequence of IL2RA function. By forming the high-affinity IL-2 receptor, IL2RA enables IL-2-driven proliferation of leukocytes. However, proliferation is mediated by intracellular signaling through IL2RB/IL2RG, not directly by IL2RA. Acceptable as non-core.
Supporting Evidence:
PMID:22446627
The principle functional effect of IL-2 is to promote T cell proliferation, particularly for naΓ―ve T cells.
|
|
GO:1902107
positive regulation of leukocyte differentiation
|
NAS
PMID:16477002 Crystal structure of the IL-2 signaling complex: paradigm fo... |
KEEP AS NON CORE |
Summary: NAS annotation for positive regulation of leukocyte differentiation from ComplexPortal, citing the crystal structure paper. IL2RA contributes to leukocyte differentiation through enabling high-affinity IL-2 signaling, which drives differentiation programs including Treg differentiation.
Reason: Similar to the proliferation annotation: IL2RA contributes indirectly to differentiation by enabling high-affinity signaling. The differentiation programs are driven by downstream STAT5/PI3K/MAPK signaling, not by IL2RA directly. Acceptable as non-core.
Supporting Evidence:
PMID:16477002
IL-2 is a cytokine that functions as a growth factor and central regulator in the immune system and mediates its effects through ligand-induced hetero-trimerization of the receptor subunits IL-2R alpha, IL-2R beta, and gamma(c).
|
|
GO:0004911
interleukin-2 receptor activity
|
IDA
PMID:16293754 Structure of the quaternary complex of interleukin-2 with it... |
ACCEPT |
Summary: IDA annotation for IL-2 receptor activity based on the crystal structure of the quaternary IL-2 receptor complex (Wang et al. 2005, Science). This 2.3 angstrom structure shows IL2RA in complex with IL-2, IL2RB, and IL2RG, demonstrating that IL2RA binding to IL-2 stabilizes a secondary binding site for IL2RB presentation, and that IL2RA makes no direct contacts with IL2RB or IL2RG.
Reason: This is a core function of IL2RA, directly demonstrated by structural analysis at 2.3 angstrom resolution. IL2RA is an integral component of the IL-2 receptor.
Supporting Evidence:
PMID:16293754
Interleukin-2 (IL-2) is an immunoregulatory cytokine that acts through a quaternary receptor signaling complex containing alpha (IL-2Ralpha), beta (IL-2Rbeta), and common gamma chain (gc) receptors.
|
|
GO:0005886
plasma membrane
|
IC
PMID:16293754 Structure of the quaternary complex of interleukin-2 with it... |
ACCEPT |
Summary: IC annotation for plasma membrane localization inferred from the crystal structure of the IL-2 receptor ectodomain complex (PMID:16293754). IL2RA is a type I transmembrane protein that functions at the plasma membrane.
Reason: Correct. IL2RA is a single-pass type I transmembrane protein localized to the plasma membrane (UniProt subcellular location annotation).
Supporting Evidence:
PMID:16293754
Interleukin-2 (IL-2) is an immunoregulatory cytokine that acts through a quaternary receptor signaling complex containing alpha (IL-2Ralpha), beta (IL-2Rbeta), and common gamma chain (gc) receptors.
|
|
GO:0038110
interleukin-2-mediated signaling pathway
|
IDA
PMID:16293754 Structure of the quaternary complex of interleukin-2 with it... |
ACCEPT |
Summary: IDA annotation for involvement in the IL-2-mediated signaling pathway based on the quaternary receptor structure (PMID:16293754). The structure demonstrates how IL2RA captures IL-2 and facilitates assembly of the signaling complex.
Reason: Core function. IL2RA is essential for high-affinity IL-2 signaling. The crystal structure demonstrates the molecular mechanism of receptor assembly.
Supporting Evidence:
PMID:16293754
the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding site for presentation to IL-2Rbeta. gammac is then recruited to the composite surface formed by the IL-2/IL-2Rbeta complex.
|
|
GO:0004911
interleukin-2 receptor activity
|
IMP
PMID:2467293 Characterization of the interleukin 2 receptor beta chain us... |
ACCEPT |
Summary: IMP annotation with contributes_to qualifier for IL-2 receptor activity, based on Tsudo et al. 1989 (PMID:2467293). This paper characterizes the IL-2 receptor beta chain and demonstrates that the alpha chain (p55/IL2RA) contributes to high-affinity IL-2 binding. Blocking the beta chain with Mik-beta 1 antibody completely abolished high-affinity IL-2 binding, showing both chains are required.
Reason: The contributes_to qualifier is appropriate because IL2RA alone does not constitute the full receptor activity -- it requires IL2RB and IL2RG for signal transduction. The IMP evidence from this foundational paper is valid.
Supporting Evidence:
PMID:2467293
The human high-affinity receptor for interleukin 2 (IL-2) has been proposed as being a membrane complex composed of at least two distinct polypeptide chains: p55 (alpha chain), recognized by the anti-Tac monoclonal antibody (mAb), and p75 (beta chain), both of which are capable of binding IL-2. Whereas the alpha chain itself has been shown to be nonfunctional, the beta chain appears to be pivotal in the IL-2 signal transduction, although the beta chain is otherwise poorly characterized.
|
|
GO:0005893
interleukin-2 receptor complex
|
TAS
PMID:2467293 Characterization of the interleukin 2 receptor beta chain us... |
ACCEPT |
Summary: TAS annotation for IL-2 receptor complex membership, based on Tsudo et al. 1989 (PMID:2467293). IL2RA (p55) is a well-established component of the IL-2 receptor complex, forming the high-affinity trimeric receptor with IL2RB and IL2RG.
Reason: Core annotation. IL2RA is unambiguously a component of the IL-2 receptor complex. This is directly demonstrated by coprecipitation, crosslinking, and structural studies.
Supporting Evidence:
PMID:2467293
These results clearly indicate that the beta chain is an indispensable component to the high-affinity IL-2 receptor and is responsible for the IL-2 signal transduction.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-450027 |
ACCEPT |
Summary: TAS annotation from Reactome reaction R-HSA-450027 (IL2RA:IL2 binds IL2RB). IL2RA is at the plasma membrane during IL-2 receptor complex assembly.
Reason: Correct. IL2RA functions at the plasma membrane. Reactome correctly places it there for IL-2 signaling.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-450054 |
ACCEPT |
Summary: TAS annotation from Reactome reaction R-HSA-450054 (IL2RA binds IL-2). IL2RA captures IL-2 at the plasma membrane.
Reason: Correct. This is the primary event in IL-2 receptor assembly at the plasma membrane.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-450063 |
ACCEPT |
Summary: TAS annotation from Reactome reaction R-HSA-450063 (IL2:IL2RA:IL2RB binds IL2RG). IL2RA is at the plasma membrane as the trimeric complex assembles.
Reason: Correct. IL2RA functions at the plasma membrane.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-451942 |
ACCEPT |
Summary: TAS annotation from Reactome reaction R-HSA-451942 (JAK3 phosphorylates JAK1 within the IL-2R complex). IL2RA is a component of this complex at the plasma membrane.
Reason: Correct. IL2RA is part of the signaling complex at the plasma membrane.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-452091 |
ACCEPT |
Summary: TAS annotation from Reactome (IL2RB Y338 phosphorylation enables SHC recruitment). IL2RA is part of the receptor complex at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein participating in these signaling events.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-452097 |
ACCEPT |
Summary: TAS annotation from Reactome (STAT5 phosphorylation at the IL-2 receptor complex). IL2RA is part of the complex at the plasma membrane.
Reason: Correct. IL2RA is at the plasma membrane.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-452100 |
ACCEPT |
Summary: TAS annotation from Reactome (SHC1 phosphorylation at the IL2 receptor). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA functions at the plasma membrane as part of the signaling complex.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-452108 |
ACCEPT |
Summary: TAS annotation from Reactome (IL2RB phosphorylation enables STAT recruitment). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane component of the IL-2 receptor.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-452122 |
ACCEPT |
Summary: TAS annotation from Reactome (JAK1 phosphorylates IL2RB). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA functions at the plasma membrane.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-453104 |
ACCEPT |
Summary: TAS annotation from Reactome (phosphorylated SHC1 recruits GRB2:GAB2). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-453111 |
ACCEPT |
Summary: TAS annotation from Reactome (phosphorylated SHC recruits GRB2:SOS1). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-508247 |
ACCEPT |
Summary: TAS annotation from Reactome (Gab2 binds p85 of PI3K). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-508282 |
ACCEPT |
Summary: TAS annotation from Reactome (SYK is a substrate for JAK1). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-508292 |
ACCEPT |
Summary: TAS annotation from Reactome (SYK binds IL2RB). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-5672965 |
ACCEPT |
Summary: TAS annotation from Reactome (RAS GEFs promote RAS nucleotide exchange). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-8877396 |
ACCEPT |
Summary: TAS annotation from Reactome (IL2RA gene expression regulation by FOXP3/RUNX1). This Reactome entry concerns transcriptional regulation of IL2RA itself, not its localization. The plasma membrane annotation is still correct for the IL2RA protein.
Reason: Correct. IL2RA protein is at the plasma membrane regardless of the specific Reactome reaction annotated.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-912527 |
ACCEPT |
Summary: TAS annotation from Reactome (SHC1 mediates cytokine-induced GAB2 phosphorylation). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-913374 |
ACCEPT |
Summary: TAS annotation from Reactome (phosphorylated SHC1 recruits SHIP). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-913424 |
ACCEPT |
Summary: TAS annotation from Reactome (SHC1:SHIP1 complex stabilized by GRB2). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-919404 |
ACCEPT |
Summary: TAS annotation from Reactome (phosphorylated STAT5 is released). IL2RA is at the plasma membrane.
Reason: Correct. IL2RA is a plasma membrane protein.
|
|
GO:0002664
regulation of T cell tolerance induction
|
IMP
PMID:23416241 Human IL2RA null mutation mediates immunodeficiency with lym... |
ACCEPT |
Summary: IMP annotation for regulation of T cell tolerance induction based on the study of a human IL2RA null mutation (PMID:23416241, Goudy et al. 2013). The CD25-deficient patient developed severe autoimmunity (enteropathy, erythrodermia) with impaired immune tolerance, demonstrating that IL2RA is required for proper T cell tolerance induction. The study shows that loss of CD25 surface expression results in impaired Treg function and failure to maintain immune homeostasis.
Reason: This is a well-supported annotation from a detailed human genetic study. The IMP evidence from a CD25-null patient directly demonstrates that IL2RA is required for immune tolerance. Loss of CD25 leads to immunodeficiency with autoimmunity, consistent with IL2RA's role in Treg homeostasis and tolerance induction.
Supporting Evidence:
PMID:23416241
we show that CD25 expression is required to maintain immune homeostasis, and CD25 deficiency is a distinct immunological disease that leads to both an autoimmune and immunodeficiency syndrome that clinically resembles IPEX syndrome.
PMID:23416241
IL-2 consumption by FOXP3+ Tregs is a critical event to maintain the homeostasis of the immune system, and the loss of CD25 surface expression by FOXP3+ Tregs in CD25 deficient patients is likely a contributing factor in the preferential CD8+ T cell proliferation, which are the mediators of autoimmunity.
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GO:0004911
interleukin-2 receptor activity
|
TAS
PMID:9096364 Human immune disorder arising from mutation of the alpha cha... |
ACCEPT |
Summary: TAS annotation for IL-2 receptor activity citing the first report of human CD25 deficiency (Sharfe et al. 1997, PMID:9096364). This paper describes a truncation mutation of IL2RA causing immunodeficiency, confirming IL2RA is a functional component of the IL-2 receptor in humans.
Reason: Core function. IL2RA is the alpha subunit of the IL-2 receptor. PMID:9096364 provides human genetic evidence demonstrating its essential role.
Supporting Evidence:
PMID:9096364
We describe here a novel human immune aberration arising from a truncation mutation of the interleukin-2 receptor alpha chain (CD25), a subunit of the tripartite high-affinity receptor for interleukin 2.
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GO:0005886
plasma membrane
|
TAS
PMID:2467293 Characterization of the interleukin 2 receptor beta chain us... |
ACCEPT |
Summary: TAS annotation for plasma membrane localization citing Tsudo et al. 1989 (PMID:2467293). The paper studies IL-2 binding at the cell surface and describes the alpha chain (p55) as a membrane receptor component.
Reason: Correct. IL2RA is a plasma membrane protein. This paper identifies IL2RA (p55) as recognized by the anti-Tac mAb on the cell surface.
Supporting Evidence:
PMID:2467293
p55 (alpha chain), recognized by the anti-Tac monoclonal antibody (mAb)
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GO:0005886
plasma membrane
|
TAS
PMID:2983318 Interleukin 2 regulates its own receptors. |
ACCEPT |
Summary: TAS annotation for plasma membrane localization citing Smith and Cantrell 1985 (PMID:2983318). This early paper on IL-2 receptor biology describes IL-2 binding sites and Tac antigen at the cell surface, confirming plasma membrane localization.
Reason: Correct. IL2RA (Tac antigen) is at the plasma membrane.
Supporting Evidence:
PMID:2983318
The cell surface density of high-affinity membrane receptors for the T-lymphocytotrophic hormone interleukin 2 (IL-2) determines the rate of T-cell-cycle progression.
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GO:0006915
apoptotic process
|
TAS
PMID:9096364 Human immune disorder arising from mutation of the alpha cha... |
MARK AS OVER ANNOTATED |
Summary: TAS annotation for apoptotic process citing PMID:9096364. This paper reports that CD25-deficient thymocytes fail to normally down-regulate bcl-2, suggesting altered apoptotic regulation. However, the direct role of IL2RA in apoptosis is indirect -- it is a consequence of impaired IL-2 signaling affecting survival signals.
Reason: IL2RA does not directly regulate apoptosis. The altered bcl-2 expression in CD25-null thymocytes (PMID:9096364) reflects impaired IL-2 signaling rather than a direct apoptotic function of IL2RA. The apoptosis connection is a downstream pleiotropic effect.
Supporting Evidence:
PMID:9096364
CD25-deficient cortical thymocytes do not express CD1, and furthermore they fail to normally down-regulate levels of the anti-apoptotic protein bcl-2.
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GO:0006955
immune response
|
TAS
PMID:9096364 Human immune disorder arising from mutation of the alpha cha... |
ACCEPT |
Summary: TAS annotation for immune response citing PMID:9096364. IL2RA is clearly involved in immune responses as a component of the IL-2 receptor. The CD25-deficient patient showed profound cellular immunodeficiency.
Reason: Correct. IL2RA is essential for normal immune responses. CD25 deficiency causes immunodeficiency (PMID:9096364).
Supporting Evidence:
PMID:9096364
Profound cellular immunodeficiency occurs as the result of mutations in proteins involved in both the differentiation and function of mature lymphoid cells.
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GO:0007166
cell surface receptor signaling pathway
|
TAS
PMID:2983318 Interleukin 2 regulates its own receptors. |
ACCEPT |
Summary: TAS annotation for cell surface receptor signaling pathway citing Smith and Cantrell 1985 (PMID:2983318). IL2RA participates in cell surface receptor signaling as part of the IL-2 receptor complex. This is a very broad annotation; more specific terms exist (IL-2-mediated signaling pathway, JAK-STAT signaling).
Reason: Correct but very general. IL2RA is part of the IL-2 receptor signaling pathway at the cell surface. More specific annotations already capture this (GO:0038110, GO:0007259). This broad IEA-level annotation is acceptable.
Supporting Evidence:
PMID:2983318
IL-2-receptor interactions actually promote the loss of IL-2 responsiveness by diminishing the density of high-affinity binding sites at the time that Tac antigen levels are increased.
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GO:0030159
signaling receptor complex adaptor activity
|
IDA
PMID:16477002 Crystal structure of the IL-2 signaling complex: paradigm fo... |
NEW |
Summary: IL2RA functions as a signaling receptor complex adaptor: it binds IL-2 and presents it to IL2RB/IL2RG to form the signaling-competent complex. The crystal structure (PMID:16477002) shows IL2RA makes no contacts with IL2RB or IL2RG; its role is to capture IL-2 and deliver it to the signaling subunits. This adaptor/presentation role is a key aspect of IL2RA function not captured by other annotations.
Reason: The current annotations do not capture IL2RA's specific role as a non-signaling adaptor that assembles the signaling complex. GO:0030159 (signaling receptor complex adaptor activity) describes the physical support role that IL2RA plays in assembling the IL-2 signaling complex. The crystal structure demonstrates that IL2RA makes no contacts with IL2RB or IL2RG, confirming its role as a ligand-capture and presentation module rather than a signaling subunit.
Supporting Evidence:
PMID:16477002
IL-2R alpha makes no contacts with IL-2R beta or gamma(c), and only minor changes are observed in the IL-2 structure in response to receptor binding. These findings support the principal role of IL-2R alpha to deliver IL-2 to the signaling complex and act as regulator of signal transduction.
PMID:16293754
the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding site for presentation to IL-2Rbeta.
|
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Plan overview
- Verified target identity and scope: IL2RA encodes the human interleukinβ2 receptor alpha chain (CD25), component of the ILβ2 receptor; organism is Homo sapiens. Literature on CD25/ILβ2RΞ± in human aligns with a glycosylated ectodomain that captures ILβ2 to assemble the highβaffinity ILβ2R with ILβ2RΞ² and Ξ³c; no conflicting gene symbol usage was found. (shouse2024interleukin2signalingin pages 1-3, tanigawa2025currentlandscapeand pages 1-2)
- Collected and synthesized recent evidence (2023β2025) on receptor assembly/affinity, expression/localization, downstream signaling, soluble CD25, and clinical/therapeutic directions (lowβdose ILβ2 and engineered ILβ2 agonists). (shouse2024interleukin2signalingin pages 1-3, tanigawa2025currentlandscapeand pages 1-2, slivkova2025theroleof pages 12-15, seddu2025interleukin2drivenmodulationof pages 19-24, lin2024asingleagentfusion pages 1-2, slivkova2025theroleof pages 41-43)
Comprehensive research report
Key concepts and definitions with current understanding
- Identity and primary function: IL2RA (CD25) encodes the alpha subunit of the interleukinβ2 receptor (ILβ2RΞ±). CD25 by itself binds ILβ2 with low affinity and primarily functions to capture and present ILβ2 in cis to ILβ2RΞ² (CD122) and the common Ξ³ chain (Ξ³c, CD132) to form the highβaffinity signaling receptor on lymphocytes. (Immunity, 2024; doi:10.1016/j.immuni.2024.02.001, published March 2024) (shouse2024interleukin2signalingin pages 1-3)
- ILβ2 receptor assembly and affinities: The highβaffinity ILβ2R is a heterotrimer of ILβ2RΞ±/Ξ²/Ξ³c with an equilibrium dissociation constant Kd of about 10 pM, whereas the intermediateβaffinity Ξ²/Ξ³c dimer binds ILβ2 at ~1 nM, and ILβ2RΞ± alone binds at ~10 nM. CD25 thus increases apparent affinity ~100βfold by recruiting Ξ²/Ξ³c to the ligandβbound complex. (Oncoimmunology, 2025; doi:10.1080/2162402x.2025.2452654, published January 2025) (tanigawa2025currentlandscapeand pages 1-2)
- Cell type expression and localization: CD25 is constitutively high on FOXP3+ regulatory T cells (Tregs), is rapidly induced on antigenβactivated conventional T cells, is expressed by group 2 innate lymphoid cells (ILC2), and can be present on some regulatory NK subsets. CD25 resides at the plasma membrane; upon ILβ2 engagement the receptor complex internalizes, terminating signaling and enabling ligand/receptor turnover. (Immunity, 2024; doi:10.1016/j.immuni.2024.02.001, March 2024; Oncoimmunology, 2025) (shouse2024interleukin2signalingin pages 1-3, tanigawa2025currentlandscapeand pages 1-2)
- Soluble CD25 (sCD25): CD25βs ectodomain can be proteolytically released, generating soluble ILβ2RΞ± (sCD25) detectable in blood/CSF as a marker of Tβcell activation. sCD25 may bind ILβ2 and act as a decoy, reducing free ILβ2 bioavailability. (Frontiers/Reviews cited in 2024β2025 syntheses) (slivkova2025theroleof pages 41-43)
Cellular and biochemical mechanism of action (localization, pathways, substrate/ligand specificity)
- Ligand and receptor specificity: ILβ2 is a 133βaa cytokine produced mainly by activated T cells; highβaffinity recognition requires the Ξ±/Ξ²/Ξ³c trimer. ILβ2RΞ²/Ξ³c alone mediate intermediateβaffinity signaling and are abundant on NK cells and memoryβphenotype CD8+ T cells, allowing responses at higher ILβ2 levels even without CD25. (Oncoimmunology, 2025; Immunity, 2024) (tanigawa2025currentlandscapeand pages 1-2, shouse2024interleukin2signalingin pages 1-3)
- Subcellular site of action: CD25 functions at the plasma membrane to capture ILβ2 and nucleate assembly of the signaling dimer (Ξ²/Ξ³c) with associated Janus kinases. Ligandβreceptor complexes undergo endocytosis after activation. (Immunity, 2024) (shouse2024interleukin2signalingin pages 1-3)
- Downstream signaling: Productive signaling is transduced by JAK1 (bound to ILβ2RΞ²) and JAK3 (bound to Ξ³c), which phosphorylate receptor cytoplasmic motifs and recruit STAT5A/B for phosphorylation, dimerization, and nuclear translocation. ILβ2 also activates PI3KβAKTβmTOR and RASβMAPK cascades; proteomic studies attribute the majority (~90%) of ILβ2βregulated phosphorylation events to JAKβdependent pathways. In Tregs, high PTEN biases signaling toward STAT5 and away from PI3KβAKTβmTOR. (Immunity, 2024; mechanistic reviews 2025) (shouse2024interleukin2signalingin pages 1-3, slivkova2025theroleof pages 12-15)
Recent developments and latest research (2023β2025)
- Quantitative binding and selective agonism through engineering: A 2024 engineered covalent ILβ2/antiβILβ2 fusion (ILβ2/SDβ01) increased apparent affinity to ILβ2RΞ± to ~0.13 nM while abrogating binding to ILβ2RΞ²Ξ³, driving highly selective STAT5 activation in human Tregs (reported Treg EC50 β 0.0003 nM). This validates tunable receptor bias via altered Ξ± vs Ξ²Ξ³ engagement and extends cytokine halfβlife via Fc fusion. (Communications Biology, 2024; doi:10.1038/s42003-024-05987-z, published March 2024) (lin2024asingleagentfusion pages 1-2)
- Lowβdose ILβ2 and receptorβselective strategies: Contemporary reviews and experimental studies emphasize doseβdependent biologyβvery low ILβ2 preferentially sustains CD25hi Tregs, whereas higher doses broaden activity to CD8+ T and NK cells via Ξ²Ξ³ receptors. Multiple approaches (muteins, PEGylation, ILβ2:mAb complexes, and immunocytokines) are in late preclinical/clinical phases to improve therapeutic index and Treg or effector bias. As of 2024, >50 nextβgeneration ILβ2 agonist trials were active. (Oncoimmunology, 2025; Immunity, 2024) (tanigawa2025currentlandscapeand pages 1-2, shouse2024interleukin2signalingin pages 1-3)
- Mechanistic consolidation of signaling strength: A 2024 Immunity synthesis clarifies that ILβ2 signaling strength and receptor composition regulate fate decisions and proliferation across Tβcell subsets, with STAT5 as the dominant effector and PI3K/MAPK contributing to metabolic and cellβcycle programs. (Immunity, 2024) (shouse2024interleukin2signalingin pages 1-3)
Current applications and realβworld implementations
- Immunoregulation with lowβdose ILβ2: Clinically, lowβdose ILβ2 regimens exploit constitutive CD25 expression on Tregs to restore immune tolerance in autoimmune/inflammatory settings by selectively expanding/activating Tregs while minimizing effector activation. Emerging engineered ILβ2s seek to broaden this window by increasing CD25 bias and halfβlife. (Immunity, 2024; Communications Biology, 2024) (shouse2024interleukin2signalingin pages 1-3, lin2024asingleagentfusion pages 1-2)
- Cancer immunotherapy: Highβdose ILβ2 can drive durable responses in subsets of metastatic RCC and melanoma but is limited by toxicity (hypotension, vascular leak). Nextβgen ILβ2 agonists are being developed to preferentially stimulate CD8+ T and NK cells or, conversely, to avoid Treg activation, via decreased CD25 affinity and increased Ξ²Ξ³ engagement, fusion formats, or targeted delivery. (Oncoimmunology, 2025) (tanigawa2025currentlandscapeand pages 1-2)
Expert opinions and analysis from authoritative sources
- The Immunity 2024 review by Malek and colleagues highlights that CD25 converts low ambient ILβ2 signals into potent STAT5βdominant programs in Tregs, with PTEN enforcing Treg selectivity; it underscores that >600 ILβ2βregulated phosphoβevents are largely JAKβdependent, prioritizing JAKβSTAT5 as the central axis for therapeutic tuning. URL: https://doi.org/10.1016/j.immuni.2024.02.001 (published March 2024) (shouse2024interleukin2signalingin pages 1-3)
- The 2025 Oncoimmunology perspective quantifies ILβ2R affinities and catalogs the rapid expansion of nextβgen ILβ2 agonists, arguing for receptorβbiased designs (e.g., Ξ²Ξ³βselective variants for cancer; Ξ±βbiased for autoimmunity) to separate efficacy from toxicity. URL: https://doi.org/10.1080/2162402x.2025.2452654 (published January 2025) (tanigawa2025currentlandscapeand pages 1-2)
- The 2024 Communications Biology study provides quantitative validation that covalent ILβ2/antiβILβ2 fusions can achieve strong Treg selectivity by enhancing ILβ2RΞ± engagement and eliminating Ξ²Ξ³ binding, offering a blueprint for clinical translation with improved pharmacokinetics. URL: https://doi.org/10.1038/s42003-024-05987-z (published March 2024) (lin2024asingleagentfusion pages 1-2)
Relevant statistics and data from recent studies
- Affinity constants for human ILβ2R subunits/assemblies: trimeric Ξ±/Ξ²/Ξ³c Kd β 10 pM; dimeric Ξ²/Ξ³c Kd β 1 nM; Ξ± alone Kd β 10 nM. These values rationalize Treg hypersensitivity to lowβabundance ILβ2 and effector responses at higher doses. (Oncoimmunology, 2025) (tanigawa2025currentlandscapeand pages 1-2)
- Engineered Tregβselective ILβ2 fusion: ~85βfold increased apparent Ξ±βchain affinity (to ~0.13 nM) with loss of Ξ²Ξ³ binding; Treg STAT5 EC50 β 0.0003 nM, demonstrating potent, highly selective signaling. (Communications Biology, 2024) (lin2024asingleagentfusion pages 1-2)
- JAKβdependency of ILβ2 signaling: phosphoproteomics attribute ~90% of ILβ2βregulated phosphoβevents to JAKβdependent mechanisms, consolidating JAK1/3 as proximal therapeutic nodes. (Immunity, 2024) (shouse2024interleukin2signalingin pages 1-3)
Functional role and pathway placement of IL2RA (CD25)
- Precise role: CD25 is a nonβsignaling capture/presentation module that dramatically increases the sensitivity of ILβ2R signaling in CD25βexpressing cells by facilitating assembly of the signalingβcompetent Ξ²/Ξ³c dimer with ILβ2. Its expression is the dominant determinant of which cells respond to lowβlevel ILβ2 in tissues and blood. (Immunity, 2024; Oncoimmunology, 2025) (shouse2024interleukin2signalingin pages 1-3, tanigawa2025currentlandscapeand pages 1-2)
- Pathway context: Upon ILβ2 binding and trimer assembly, JAK1/3 activation drives STAT5A/B phosphorylation and transcriptional programs for proliferation/survival; concurrent PI3KβAKTβmTOR and RASβMAPK pathways shape metabolism, cellβcycle progression, and differentiation, with subsetβspecific biases (e.g., PTENβhigh Tregs). (Immunity, 2024; mechanistic reviews) (shouse2024interleukin2signalingin pages 1-3, slivkova2025theroleof pages 12-15)
Soluble CD25 (biomarker and mechanism)
- Biogenesis and effects: sCD25 arises by proteolytic shedding of the ectodomain. It binds ILβ2 and can act as a decoy receptor, modulating cytokine availability. Clinically, elevated sCD25 is used as a marker of Tβcell activation and immune dysregulation in diverse conditions; its levels are often integrated into disease activity assessments and prognostic models. (2024β2025 reviews) (slivkova2025theroleof pages 41-43)
Genetic associations with autoimmunity (evidence summary)
- Evidence synthesis indicates that the IL2RA locus is a shared signal across multiple autoimmune diseases and a rational target for preventive/therapeutic modulation of ILβ2 signaling; while diseaseβspecific effect sizes vary, convergent analyses prioritize ILβ2/ILβ2R signaling in autoimmunity pathogenesis. (expert reviews, 2024β2025) (slivkova2025theroleof pages 41-43, shouse2024interleukin2signalingin pages 1-3)
Therapeutic landscape targeting CD25/ILβ2R pathway
- Lowβdose ILβ2: Clinically used to expand Tregs and restore tolerance; dose and schedule are tuned to exploit CD25βdependent hypersensitivity. (Immunity, 2024) (shouse2024interleukin2signalingin pages 1-3)
- Engineered ILβ2 agonists: Multiple clinical programs are testing receptorβbiased ILβ2 variants (e.g., Ξ²Ξ³βselective for cancer, Ξ±βbiased for autoimmunity) and fusion formats to extend halfβlife and alter tissue targeting. (Oncoimmunology, 2025) (tanigawa2025currentlandscapeand pages 1-2)
- ILβ2:antiβILβ2 fusion proteins: A covalent human ILβ2/antiβILβ2 fusion with Fc engineering achieved strong Treg selectivity and favorable inβvitro potency profiles, supporting translation to human autoimmune indications. (Communications Biology, 2024) (lin2024asingleagentfusion pages 1-2)
Concise synthesis artifact
| Topic | Key finding (concise, quantitative where possible) | Primary context / cell type | Mechanism / pathway | Recent applications / implications | Citations |
|---|---|---|---|---|---|
| Identity / verification | IL2RA (CD25), UniProt P01589; contains Sushi/CCP (SCR) domains; human protein serving as IL-2R Ξ± chain | Homo sapiens (immune cells) | Binds IL-2 and presents it to IL-2RΞ²/Ξ³c for highβaffinity receptor assembly | Foundational identifier for CD25-targeted diagnostics/therapeutics | (tanigawa2025currentlandscapeand pages 1-2, shouse2024interleukin2signalingin pages 1-3, lin2024asingleagentfusion pages 1-2) |
| Receptor assembly & affinities | Highβaffinity trimer (Ξ±/Ξ²/Ξ³c) Kd β10 pM; intermediate Ξ²/Ξ³c dimer β1 nM; Ξ± alone β10 nM β CD25 increases apparent affinity ~100Γ | Highβaffinity: Tregs; intermediate: NK, memory CD8+ | CD25 captures ILβ2 and promotes Ξ²/Ξ³c recruitment; JAK1 (Ξ²)/JAK3 (Ξ³c) activated upon assembly | Basis for engineering ILβ2 selectivity (muteins, antibody complexes) to bias Treg vs effector responses | (tanigawa2025currentlandscapeand pages 1-2, slivkova2025theroleof pages 12-15, seddu2025interleukin2drivenmodulationof pages 19-24, lin2024asingleagentfusion pages 1-2) |
| Cellβtype expression | Constitutive high CD25 on FOXP3+ Tregs; induced on activated CD4+/CD8+ T cells; present on ILC2s and some regulatory NK subsets | Tregs; activated effector T cells; ILC2; NK cells | Expression level determines sensitivity to low ILβ2; CD25high cells signal strongly via STAT5 at low ILβ2 | Rationale for lowβdose ILβ2 to expand Tregs in autoimmunity and transplant tolerance strategies | (shouse2024interleukin2signalingin pages 1-3, seddu2025interleukin2drivenmodulationof pages 19-24, lin2024asingleagentfusion pages 1-2) |
| Localization | Transmembrane (plasma membrane) receptor; ligandβinduced internalization; receptor ectodomain can be shed to form soluble CD25 (sCD25) | Cell surface (membrane) and circulation (sCD25) | Internalization terminates/resets signaling; proteolytic shedding produces circulating decoy/biomarker | sCD25 measured as inflammation/ disease biomarker; influences ILβ2 bioavailability | (tanigawa2025currentlandscapeand pages 1-2, seddu2025interleukin2drivenmodulationof pages 19-24, slivkova2025theroleof pages 41-43) |
| Downstream signaling | Dominant JAK1/JAK3 β STAT5 activation; also PI3KβAKTβmTOR and RASβMAPK cascades | T cells (Treg and Teff) | Signal via phosphorylated STAT5 to regulate survival, proliferation, and Treg program; PTEN in Tregs biases away from PI3K signaling toward STAT5 | Target nodes (JAK, PI3K, mTOR) inform combination or selective therapies; explains differential cellular responses to ILβ2 dose | (slivkova2025theroleof pages 12-15, shouse2024interleukin2signalingin pages 1-3, seddu2025interleukin2drivenmodulationof pages 19-24) |
| Soluble CD25 (sCD25) | Generated by ectodomain shedding (proteolysis) and detectable in serum/CSF; can act as ILβ2 decoy and a marker of Tβcell activation | Circulating biomarker in blood/CSF; reflects activated T cells/Tregs | Competes for ILβ2 binding (modulates availability); levels correlate with immune activation/severity in diseases | sCD25 used as a biomarker in TB, SLE and other inflammatory conditions; considered in prognostic panels | (tanigawa2025currentlandscapeand pages 1-2, slivkova2025theroleof pages 41-43) |
| Genetic associations | IL2RA locus implicated in GWAS/MR signals across multiple autoimmune diseases (e.g., type 1 diabetes and shared autoimmunity loci) | Human genetic studies / autoimmune cohorts | Variants modulate IL2RA expression/function, altering ILβ2 sensitivity and immune tolerance | Genetic evidence motivates ILβ2/ILβ2R pathway targeting for prevention or therapy in autoimmunity | (slivkova2025theroleof pages 41-43, shouse2024interleukin2signalingin pages 1-3) |
| Therapeutics targeting CD25 | AntiβCD25 mAbs (basiliximab) used for transplant induction; CD25 ADCs (camidanlumab tesirine) tested in Hodgkin lymphoma; safety/AE surveillance informs clinical use | Transplant recipients; hematologic malignancy patients | Antibody blockade or ADC-mediated cytotoxicity of CD25+ cells; ILβ2R blockade reduces T cell activation | Basiliximab standard in induction immunosuppression; CD25 ADCs explored for Treg depletion in tumors; safety signals and trial data guide indications | (tanigawa2025currentlandscapeand pages 1-2, slivkova2025theroleof pages 41-43, shouse2024interleukin2signalingin pages 1-3) |
| ILβ2 / ILβ2R pathway therapeutics | Lowβdose ILβ2 expands Tregs clinically; engineered ILβ2 modalities (ILβ2/antiβILβ2 fusions, muteins, Fcβfusions) can bias activity (Treg vs effector); ~50+ nextβgen ILβ2 trials reported (2024) | Autoimmunity, cancer, transplantation (clinical trials) | Engineering alters affinity for CD25 vs CD122/CD132 to tune downstream STAT5 vs effector signaling; fusion/PEGylation extends halfβlife | Recent examples: covalent ILβ2/antiβILβ2 fusion (selective Treg expansion, Lin etβ―al. 2024), humanized ILβ2 muteins (preclinical JCI 2024), active clinical development of biased ILβ2s for autoimmunity and cancer | (lin2024asingleagentfusion pages 1-2, tanigawa2025currentlandscapeand pages 1-2, slivkova2025theroleof pages 41-43) |
Table: Compact, humanβfocused summary table of IL2RA (CD25) functional annotation: identity, receptor assembly/affinities, expression, localization, signaling, soluble form, genetics, and therapeutics with recent implications and citations to the assembled evidence.
Verification summary (ambiguity check)
- The gene symbol IL2RA unambiguously refers to interleukinβ2 receptor alpha (CD25) in human literature; no conflicting usage was encountered. The human organism context and receptor biology in recent Immunity (2024) and Oncoimmunology (2025) articles fully align with the provided UniProt identity for P01589. (shouse2024interleukin2signalingin pages 1-3, tanigawa2025currentlandscapeand pages 1-2)
References (with URLs and publication dates where available)
- Shouse AN, LaPorte KM, Malek TR. Interleukinβ2 signaling in the regulation of T cell biology in autoimmunity and cancer. Immunity. Published March 2024. URL: https://doi.org/10.1016/j.immuni.2024.02.001 (shouse2024interleukin2signalingin pages 1-3)
- Tanigawa K, Redmond WL. Current landscape and future prospects of interleukinβ2 receptor (ILβ2R) agonists in cancer immunotherapy. Oncoimmunology. Published January 2025. URL: https://doi.org/10.1080/2162402x.2025.2452654 (tanigawa2025currentlandscapeand pages 1-2)
- Lin Y, Wang X, Qin Y, et al. A singleβagent fusion of human ILβ2 and antiβILβ2 antibody that selectively expands regulatory T cells. Communications Biology. Published March 2024. URL: https://doi.org/10.1038/s42003-024-05987-z (lin2024asingleagentfusion pages 1-2)
- Additional mechanistic syntheses on receptor assembly/signaling and therapeutic engineering that inform this report are detailed in the curated 2025 overviews and reviews (citations as embedded above). (slivkova2025theroleof pages 12-15, seddu2025interleukin2drivenmodulationof pages 19-24, slivkova2025theroleof pages 41-43, slivkova2025theroleof pages 31-34, slivkova2025theroleof pages 28-31)
References
(shouse2024interleukin2signalingin pages 1-3): Acacia N. Shouse, Kathryn M. LaPorte, and Thomas R. Malek. Interleukin-2 signaling in the regulation of t cell biology in autoimmunity and cancer. Immunity, 57 3:414-428, Mar 2024. URL: https://doi.org/10.1016/j.immuni.2024.02.001, doi:10.1016/j.immuni.2024.02.001. This article has 110 citations and is from a highest quality peer-reviewed journal.
(tanigawa2025currentlandscapeand pages 1-2): Kengo Tanigawa and William L. Redmond. Current landscape and future prospects of interleukin-2 receptor (il-2r) agonists in cancer immunotherapy. Oncoimmunology, Jan 2025. URL: https://doi.org/10.1080/2162402x.2025.2452654, doi:10.1080/2162402x.2025.2452654. This article has 18 citations and is from a domain leading peer-reviewed journal.
(slivkova2025theroleof pages 12-15): V SlivkovΓ‘. The role of il-2 in t cell immune response and homeostasis: implications for immunotherapy. Unknown journal, 2025.
(seddu2025interleukin2drivenmodulationof pages 19-24): K Seddu. Interleukin-2-driven modulation of the regulatory t cell transcriptome and epigenome. Unknown journal, 2025.
(lin2024asingleagentfusion pages 1-2): Yuan Lin, Xue Wang, Yuhao Qin, Chengpan Wang, Tang Zhou, Long Zhang, Lu Su, Wenming Ren, and Cheng Liao. A single-agent fusion of human il-2 and anti-il-2 antibody that selectively expands regulatory t cells. Communications Biology, Mar 2024. URL: https://doi.org/10.1038/s42003-024-05987-z, doi:10.1038/s42003-024-05987-z. This article has 8 citations and is from a peer-reviewed journal.
(slivkova2025theroleof pages 41-43): V SlivkovΓ‘. The role of il-2 in t cell immune response and homeostasis: implications for immunotherapy. Unknown journal, 2025.
(slivkova2025theroleof pages 31-34): V SlivkovΓ‘. The role of il-2 in t cell immune response and homeostasis: implications for immunotherapy. Unknown journal, 2025.
(slivkova2025theroleof pages 28-31): V SlivkovΓ‘. The role of il-2 in t cell immune response and homeostasis: implications for immunotherapy. Unknown journal, 2025.
id: P01589
gene_symbol: IL2RA
product_type: PROTEIN
status: DRAFT
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: IL2RA (CD25, p55, TAC antigen) encodes the alpha subunit of the interleukin-2
receptor. IL2RA is a type I transmembrane glycoprotein containing two Sushi/CCP
(complement control protein) domains in its extracellular region. It binds IL-2
with low affinity (Kd ~10 nM) on its own, but its primary role is to capture IL-2
and present it to the signaling-competent IL-2Rbeta/gammac heterodimer, thereby
forming the high-affinity trimeric receptor complex (Kd ~10 pM). IL2RA itself has
a very short cytoplasmic tail (13 residues) and does not directly transduce signals.
It is constitutively expressed on FOXP3+ regulatory T cells (Tregs) and is induced
on activated conventional T cells. By enabling Tregs to respond to very low concentrations
of IL-2, IL2RA is critical for immune tolerance and T cell homeostasis. Loss-of-function
mutations cause immunodeficiency with lymphoproliferation and autoimmunity (IMD41),
and common variants at the IL2RA locus are associated with type 1 diabetes and multiple
sclerosis susceptibility.
existing_annotations:
- term:
id: GO:0006954
label: inflammatory response
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation to inflammatory response based on phylogenetic inference.
IL2RA is part of the IL-2 signaling axis that regulates immune responses, and
loss of CD25 leads to autoimmune inflammatory disease (PMID:23416241, PMID:9096364).
However, IL2RA itself is a receptor subunit rather than a direct inflammatory
mediator. The inflammatory phenotype arises indirectly from loss of immune tolerance.
The IBA annotation is at an appropriate level of generality given that IL-2
signaling through this receptor modulates inflammatory processes.
action: KEEP_AS_NON_CORE
reason: IL2RA participates in inflammatory response indirectly by controlling
IL-2 signaling and Treg function. Loss of CD25 leads to severe inflammation
and autoimmunity (PMID:23416241), confirming involvement. However, this is not
the core molecular function of IL2RA; it is a downstream consequence of its
receptor role. The IBA annotation is phylogenetically supported and reasonable
as a non-core annotation.
supported_by:
- reference_id: PMID:23416241
supporting_text: The chronic effect of this mutation led to the development
of progressive manifestations of both autoimmunity, such as enteropathy, erythrodermia
and severe alopecia, and immunodeficiency with chronic CMV infection.
- reference_id: PMID:9096364
supporting_text: Extensive lymphocytic infiltration of tissues, including lung,
liver, gut, and bone, is observed, accompanied by tissue atrophy and inflammation.
- term:
id: GO:0019976
label: interleukin-2 binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: IBA annotation for interleukin-2 binding based on phylogenetic inference.
This is a well-established core function of IL2RA. The crystal structure of
the quaternary complex (PMID:16293754, PMID:16477002) shows IL2RA forms the
largest interface with IL-2 among the three receptor chains, consistent with
its role in initial IL-2 capture. IL2RA alone binds IL-2 with ~10 nM affinity.
action: ACCEPT
reason: IL-2 binding is the primary molecular function of IL2RA. Structural studies
demonstrate extensive direct contacts between IL2RA and IL-2 (PMID:16477002,
PMID:16293754). The IBA annotation is accurate and well-supported.
supported_by:
- reference_id: PMID:16477002
supporting_text: The IL-2R alpha subunit forms the largest of the three IL-2/IL-2R
interfaces, which, together with the high abundance of charge-charge interactions,
correlates well with the rapid association rate and high-affinity interaction
of IL-2R alpha with IL-2 at the cell surface.
- reference_id: PMID:16293754
supporting_text: the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding
site for presentation to IL-2Rbeta.
- term:
id: GO:0002376
label: immune system process
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: IEA annotation from UniProtKB keyword mapping (Immunity). IL2RA is clearly
an immune system component. This is a very broad term that is subsumed by more
specific annotations already present.
action: ACCEPT
reason: Correct but very general. IL2RA is unambiguously involved in immune system
processes. This broad IEA annotation is acceptable as a general umbrella even
though more specific annotations exist.
- term:
id: GO:0002682
label: regulation of immune system process
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: IEA annotation from ARBA model. IL2RA is central to the regulation of
immune responses through its role in the IL-2 receptor complex. It controls
Treg function and effector T cell expansion, which are key immune regulatory
processes (PMID:23416241).
action: ACCEPT
reason: Appropriate general annotation. IL2RA is a key regulator of immune system
processes through its role in IL-2 signaling and Treg homeostasis. More specific
annotations exist (e.g., regulation of T cell tolerance induction), so this
broader term is also acceptable.
supported_by:
- reference_id: PMID:23416241
supporting_text: In conclusion, we show that CD25 expression is required to
maintain immune homeostasis, and CD25 deficiency is a distinct immunological
disease that leads to both an autoimmune and immunodeficiency syndrome that
clinically resembles IPEX syndrome.
- term:
id: GO:0004911
label: interleukin-2 receptor activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for IL-2 receptor activity from combined automated methods.
This is a core function of IL2RA. Note that IL2RA contributes_to this activity
as part of the trimeric complex, since the alpha chain alone does not transduce
signal.
action: ACCEPT
reason: Correct. IL2RA is an essential component of the IL-2 receptor complex.
This IEA annotation is concordant with the IDA and IMP annotations for the same
term.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: 'IEA annotation for plasma membrane localization from ARBA. IL2RA is
a type I transmembrane protein that functions at the plasma membrane (UniProt:
Membrane; Single-pass type I membrane protein).'
action: ACCEPT
reason: Correct. IL2RA is a well-established plasma membrane protein. This is
concordant with multiple other annotations for the same term from different
evidence codes.
- term:
id: GO:0006915
label: apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: IEA annotation for apoptotic process from ARBA. IL-2 signaling through
the IL-2 receptor can influence apoptosis (IL-2 withdrawal leads to apoptosis;
CD25 deficiency affects bcl-2 expression in thymocytes per PMID:9096364). However,
IL2RA is not a direct apoptosis regulator; its connection to apoptosis is indirect
through modulation of IL-2 signaling strength.
action: MARK_AS_OVER_ANNOTATED
reason: 'IL2RA does not directly regulate apoptosis. The connection is indirect:
IL-2 signaling promotes survival via STAT5/bcl-2, and its withdrawal can lead
to apoptosis. The CD25-deficient patient thymocytes showed altered bcl-2 levels
(PMID:9096364), but this is a downstream consequence of impaired IL-2 signaling,
not a direct function of IL2RA. This is an over-annotation of a pleiotropic
downstream effect.'
supported_by:
- reference_id: PMID:9096364
supporting_text: CD25-deficient cortical thymocytes do not express CD1, and
furthermore they fail to normally down-regulate levels of the anti-apoptotic
protein bcl-2.
- term:
id: GO:0006955
label: immune response
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: IEA annotation for immune response from ARBA. IL2RA is clearly involved
in immune responses as a component of the IL-2 receptor on T cells and other
immune cells.
action: ACCEPT
reason: Correct general annotation. IL2RA is an integral part of the immune response
machinery. This is broader than the more specific annotations but acceptable.
- term:
id: GO:0016020
label: membrane
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: IEA annotation for membrane localization from UniProtKB subcellular location
mapping. IL2RA is a transmembrane protein. This is a very generic CC annotation;
more specific plasma membrane annotations exist.
action: ACCEPT
reason: Correct but very generic. Subsumed by the more specific plasma membrane
annotations. Acceptable as an IEA.
- term:
id: GO:0019976
label: interleukin-2 binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: IEA annotation for interleukin-2 binding from combined automated methods.
Duplicate of the IBA annotation for the same GO term. IL-2 binding is a well-established
core function of IL2RA.
action: ACCEPT
reason: Correct. IL2RA directly binds IL-2. This IEA annotation is concordant
with the IBA annotation. Duplicate GO IDs from different evidence sources are
acceptable.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16477002
review:
summary: IPI annotation for protein binding based on the crystal structure of
the IL-2 signaling complex (PMID:16477002). The interacting partner is IL-2
(UniProtKB:P60568). While the physical interaction is real and demonstrated
by crystallography, the term 'protein binding' is uninformative. The more specific
term 'interleukin-2 binding' (GO:0019976) already captures this interaction
more precisely.
action: MODIFY
reason: The term 'protein binding' is uninformative per curation guidelines. The
crystal structure demonstrates direct IL2RA:IL-2 binding (PMID:16477002), which
is better captured by GO:0019976 (interleukin-2 binding). The with/from column
shows UniProtKB:P60568 (IL-2), confirming the specific interaction.
proposed_replacement_terms:
- id: GO:0019976
label: interleukin-2 binding
supported_by:
- reference_id: PMID:16477002
supporting_text: IL-2 is a cytokine that functions as a growth factor and central
regulator in the immune system and mediates its effects through ligand-induced
hetero-trimerization of the receptor subunits IL-2R alpha, IL-2R beta, and
gamma(c). Here, we describe the crystal structure of the trimeric assembly
of the human IL-2 receptor ectodomains in complex with IL-2 at 3.0 A resolution.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17032757
review:
summary: IPI annotation for protein binding based on PMID:17032757 (Thanos et
al. 2006), which describes a small molecule (SP4206) that mimics IL2RA in binding
IL-2. The with/from column indicates UniProtKB:P60568 (IL-2). This study indirectly
demonstrates IL2RA-IL-2 interaction by showing a small molecule mimics IL2RA
hot-spot contacts on IL-2. Again, 'protein binding' is uninformative.
action: MODIFY
reason: 'Same issue as above: ''protein binding'' is too generic. The underlying
interaction is IL2RA binding to IL-2, better captured by GO:0019976. PMID:17032757
validates the IL2RA:IL-2 binding interface through small molecule mimicry studies.'
proposed_replacement_terms:
- id: GO:0019976
label: interleukin-2 binding
supported_by:
- reference_id: PMID:17032757
supporting_text: a high-affinity small molecule, SP4206 (Kd approximately 70
nM), was found to block binding of the IL-2alpha receptor (IL-2Ralpha) to
IL-2 (Kd approximately 10 nM).
- term:
id: GO:0002437
label: inflammatory response to antigenic stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA
is involved in immune responses including inflammation following antigenic stimulation.
However, this is an overly specific downstream biological process; IL2RA does
not directly mediate inflammatory responses to antigens. Its role is in modulating
IL-2 signaling sensitivity, which indirectly affects inflammatory outcomes.
action: MARK_AS_OVER_ANNOTATED
reason: IL2RA does not directly drive inflammatory responses to antigenic stimuli.
Its role is to capture IL-2 and form the high-affinity receptor. Inflammatory
consequences are downstream and indirect. This term is too specific for the
actual role of IL2RA.
- term:
id: GO:0009897
label: external side of plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA annotation from Ensembl Compara ortholog transfer (mouse IL2RA).
IL2RA is a type I transmembrane protein with its Sushi/CCP domains exposed on
the external side of the plasma membrane, where it captures IL-2. This is accurate
and more specific than the generic plasma membrane annotation.
action: ACCEPT
reason: Correct and more informative than generic plasma membrane. The IL-2 binding
domain of IL2RA (extracellular region, residues 22-240) is on the external side
of the plasma membrane (UniProt topology annotation).
- term:
id: GO:0009986
label: cell surface
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA
is well-established as a cell surface receptor, detectable by flow cytometry
with anti-CD25 antibodies on T cells and other immune cells (PMID:23416241).
action: ACCEPT
reason: Correct. IL2RA/CD25 is a canonical cell surface marker widely used in
immunology.
supported_by:
- reference_id: PMID:23416241
supporting_text: Cell-surface CD25 expression is critical for maintaining immune
function and homeostasis.
- term:
id: GO:0042102
label: positive regulation of T cell proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA
enables high-affinity IL-2 signaling, which drives T cell proliferation. PMID:22446627
demonstrates that CD25 expression enhances IL-2-driven T cell proliferation,
and PMID:23416241 shows CD25-null T cells have impaired proliferative responses.
action: KEEP_AS_NON_CORE
reason: IL2RA contributes to T cell proliferation by enabling high-affinity IL-2
signaling. However, this is a downstream biological consequence rather than
the core molecular function. The CD25-null patient study shows impaired polyclonal
proliferative responses (PMID:23416241), confirming IL2RA's role, but the proliferative
effect is mediated by IL2RB/IL2RG signaling.
supported_by:
- reference_id: PMID:23416241
supporting_text: The patient's PBMCs had poor in vitro proliferation response
to TCR-mediated activation compared to healthy controls (Fig
- reference_id: PMID:22446627
supporting_text: The principle functional effect of IL-2 is to promote T cell
proliferation, particularly for naΓ―ve T cells.
- term:
id: GO:0045582
label: positive regulation of T cell differentiation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: IEA annotation from Ensembl Compara ortholog transfer (rat IL2RA). IL2RA/CD25
promotes Treg differentiation and maintenance by enabling high-affinity IL-2
signaling, which drives STAT5-dependent FOXP3 transcription. The deep research
review confirms that CD25 expression determines which cells respond to low IL-2
levels and differentiate appropriately.
action: KEEP_AS_NON_CORE
reason: IL2RA contributes to T cell differentiation (especially Treg differentiation)
by enabling high-affinity IL-2 signaling. However, differentiation is a downstream
process mediated by intracellular signaling through IL2RB/IL2RG, not directly
by IL2RA. This is a biologically important but non-core function.
- term:
id: GO:0007259
label: cell surface receptor signaling pathway via JAK-STAT
evidence_type: NAS
original_reference_id: PMID:22446627
review:
summary: NAS annotation for JAK-STAT signaling from ComplexPortal, citing the
IL-2 superkine paper (PMID:22446627). IL-2 signaling through the trimeric receptor
activates JAK1/JAK3 and STAT5. While IL2RA contributes to this pathway by forming
the high-affinity receptor, it does not itself signal via JAK-STAT; the signaling
is mediated by IL2RB and IL2RG (which bind JAK1 and JAK3 respectively).
action: KEEP_AS_NON_CORE
reason: IL2RA participates in the IL-2 receptor complex that signals via JAK-STAT,
but JAK-STAT signaling is transduced by IL2RB (JAK1) and IL2RG (JAK3), not by
IL2RA. IL2RA's 13-residue cytoplasmic tail has no signaling capacity. This annotation
is acceptable as a non-core annotation since IL2RA is part of the complex, but
the signaling itself is not a direct function of IL2RA.
supported_by:
- reference_id: PMID:22446627
supporting_text: On activated T cells, IL-2 signals through a quaternary 'high
affinity' receptor complex consisting of IL-2, IL-2Ralpha (termed CD25), IL-2Rbeta
and IL-2Rgamma.
- term:
id: GO:0038110
label: interleukin-2-mediated signaling pathway
evidence_type: NAS
original_reference_id: PMID:22446627
review:
summary: NAS annotation for IL-2-mediated signaling pathway from ComplexPortal,
citing PMID:22446627. IL2RA is essential for high-affinity IL-2 signaling by
forming the trimeric receptor complex. The superkine study demonstrates that
CD25 expression determines cell sensitivity to IL-2 signaling.
action: ACCEPT
reason: IL2RA is a critical component of the IL-2 signaling pathway. Without CD25,
cells respond only to high IL-2 concentrations via the intermediate-affinity
IL2RB/IL2RG receptor. This annotation is a core function of IL2RA.
supported_by:
- reference_id: PMID:22446627
supporting_text: Naive T cells express only a low density of IL-2Rbeta and IL-2Rgamma,
and are therefore relatively insensitive to IL-2, but acquire sensitivity
after CD25 expression, which captures the cytokine and presents it to IL-2Rbeta
and IL-2Rgamma.
- term:
id: GO:0070665
label: positive regulation of leukocyte proliferation
evidence_type: NAS
original_reference_id: PMID:22446627
review:
summary: NAS annotation for positive regulation of leukocyte proliferation from
ComplexPortal. IL2RA enables high-affinity IL-2 signaling that drives T cell
and other leukocyte proliferation. This is a broader parent term of T cell proliferation.
action: KEEP_AS_NON_CORE
reason: This is a biologically relevant but broad downstream consequence of IL2RA
function. By forming the high-affinity IL-2 receptor, IL2RA enables IL-2-driven
proliferation of leukocytes. However, proliferation is mediated by intracellular
signaling through IL2RB/IL2RG, not directly by IL2RA. Acceptable as non-core.
supported_by:
- reference_id: PMID:22446627
supporting_text: The principle functional effect of IL-2 is to promote T cell
proliferation, particularly for naΓ―ve T cells.
- term:
id: GO:1902107
label: positive regulation of leukocyte differentiation
evidence_type: NAS
original_reference_id: PMID:16477002
review:
summary: NAS annotation for positive regulation of leukocyte differentiation from
ComplexPortal, citing the crystal structure paper. IL2RA contributes to leukocyte
differentiation through enabling high-affinity IL-2 signaling, which drives
differentiation programs including Treg differentiation.
action: KEEP_AS_NON_CORE
reason: 'Similar to the proliferation annotation: IL2RA contributes indirectly
to differentiation by enabling high-affinity signaling. The differentiation
programs are driven by downstream STAT5/PI3K/MAPK signaling, not by IL2RA directly.
Acceptable as non-core.'
supported_by:
- reference_id: PMID:16477002
supporting_text: IL-2 is a cytokine that functions as a growth factor and central
regulator in the immune system and mediates its effects through ligand-induced
hetero-trimerization of the receptor subunits IL-2R alpha, IL-2R beta, and
gamma(c).
- term:
id: GO:0004911
label: interleukin-2 receptor activity
evidence_type: IDA
original_reference_id: PMID:16293754
review:
summary: IDA annotation for IL-2 receptor activity based on the crystal structure
of the quaternary IL-2 receptor complex (Wang et al. 2005, Science). This 2.3
angstrom structure shows IL2RA in complex with IL-2, IL2RB, and IL2RG, demonstrating
that IL2RA binding to IL-2 stabilizes a secondary binding site for IL2RB presentation,
and that IL2RA makes no direct contacts with IL2RB or IL2RG.
action: ACCEPT
reason: This is a core function of IL2RA, directly demonstrated by structural
analysis at 2.3 angstrom resolution. IL2RA is an integral component of the IL-2
receptor.
supported_by:
- reference_id: PMID:16293754
supporting_text: Interleukin-2 (IL-2) is an immunoregulatory cytokine that acts
through a quaternary receptor signaling complex containing alpha (IL-2Ralpha),
beta (IL-2Rbeta), and common gamma chain (gc) receptors.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IC
original_reference_id: PMID:16293754
review:
summary: IC annotation for plasma membrane localization inferred from the crystal
structure of the IL-2 receptor ectodomain complex (PMID:16293754). IL2RA is
a type I transmembrane protein that functions at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a single-pass type I transmembrane protein localized
to the plasma membrane (UniProt subcellular location annotation).
supported_by:
- reference_id: PMID:16293754
supporting_text: Interleukin-2 (IL-2) is an immunoregulatory cytokine that acts
through a quaternary receptor signaling complex containing alpha (IL-2Ralpha),
beta (IL-2Rbeta), and common gamma chain (gc) receptors.
- term:
id: GO:0038110
label: interleukin-2-mediated signaling pathway
evidence_type: IDA
original_reference_id: PMID:16293754
review:
summary: IDA annotation for involvement in the IL-2-mediated signaling pathway
based on the quaternary receptor structure (PMID:16293754). The structure demonstrates
how IL2RA captures IL-2 and facilitates assembly of the signaling complex.
action: ACCEPT
reason: Core function. IL2RA is essential for high-affinity IL-2 signaling. The
crystal structure demonstrates the molecular mechanism of receptor assembly.
supported_by:
- reference_id: PMID:16293754
supporting_text: the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding
site for presentation to IL-2Rbeta. gammac is then recruited to the composite
surface formed by the IL-2/IL-2Rbeta complex.
- term:
id: GO:0004911
label: interleukin-2 receptor activity
evidence_type: IMP
original_reference_id: PMID:2467293
qualifier: contributes_to
review:
summary: IMP annotation with contributes_to qualifier for IL-2 receptor activity,
based on Tsudo et al. 1989 (PMID:2467293). This paper characterizes the IL-2
receptor beta chain and demonstrates that the alpha chain (p55/IL2RA) contributes
to high-affinity IL-2 binding. Blocking the beta chain with Mik-beta 1 antibody
completely abolished high-affinity IL-2 binding, showing both chains are required.
action: ACCEPT
reason: The contributes_to qualifier is appropriate because IL2RA alone does not
constitute the full receptor activity -- it requires IL2RB and IL2RG for signal
transduction. The IMP evidence from this foundational paper is valid.
supported_by:
- reference_id: PMID:2467293
supporting_text: 'The human high-affinity receptor for interleukin 2 (IL-2)
has been proposed as being a membrane complex composed of at least two distinct
polypeptide chains: p55 (alpha chain), recognized by the anti-Tac monoclonal
antibody (mAb), and p75 (beta chain), both of which are capable of binding
IL-2. Whereas the alpha chain itself has been shown to be nonfunctional, the
beta chain appears to be pivotal in the IL-2 signal transduction, although
the beta chain is otherwise poorly characterized.'
- term:
id: GO:0005893
label: interleukin-2 receptor complex
evidence_type: TAS
original_reference_id: PMID:2467293
review:
summary: TAS annotation for IL-2 receptor complex membership, based on Tsudo et
al. 1989 (PMID:2467293). IL2RA (p55) is a well-established component of the
IL-2 receptor complex, forming the high-affinity trimeric receptor with IL2RB
and IL2RG.
action: ACCEPT
reason: Core annotation. IL2RA is unambiguously a component of the IL-2 receptor
complex. This is directly demonstrated by coprecipitation, crosslinking, and
structural studies.
supported_by:
- reference_id: PMID:2467293
supporting_text: These results clearly indicate that the beta chain is an indispensable
component to the high-affinity IL-2 receptor and is responsible for the IL-2
signal transduction.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-450027
review:
summary: TAS annotation from Reactome reaction R-HSA-450027 (IL2RA:IL2 binds IL2RB).
IL2RA is at the plasma membrane during IL-2 receptor complex assembly.
action: ACCEPT
reason: Correct. IL2RA functions at the plasma membrane. Reactome correctly places
it there for IL-2 signaling.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-450054
review:
summary: TAS annotation from Reactome reaction R-HSA-450054 (IL2RA binds IL-2).
IL2RA captures IL-2 at the plasma membrane.
action: ACCEPT
reason: Correct. This is the primary event in IL-2 receptor assembly at the plasma
membrane.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-450063
review:
summary: TAS annotation from Reactome reaction R-HSA-450063 (IL2:IL2RA:IL2RB binds
IL2RG). IL2RA is at the plasma membrane as the trimeric complex assembles.
action: ACCEPT
reason: Correct. IL2RA functions at the plasma membrane.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-451942
review:
summary: TAS annotation from Reactome reaction R-HSA-451942 (JAK3 phosphorylates
JAK1 within the IL-2R complex). IL2RA is a component of this complex at the
plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is part of the signaling complex at the plasma membrane.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-452091
review:
summary: TAS annotation from Reactome (IL2RB Y338 phosphorylation enables SHC
recruitment). IL2RA is part of the receptor complex at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein participating in these signaling
events.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-452097
review:
summary: TAS annotation from Reactome (STAT5 phosphorylation at the IL-2 receptor
complex). IL2RA is part of the complex at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is at the plasma membrane.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-452100
review:
summary: TAS annotation from Reactome (SHC1 phosphorylation at the IL2 receptor).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA functions at the plasma membrane as part of the signaling
complex.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-452108
review:
summary: TAS annotation from Reactome (IL2RB phosphorylation enables STAT recruitment).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane component of the IL-2 receptor.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-452122
review:
summary: TAS annotation from Reactome (JAK1 phosphorylates IL2RB). IL2RA is at
the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA functions at the plasma membrane.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-453104
review:
summary: TAS annotation from Reactome (phosphorylated SHC1 recruits GRB2:GAB2).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-453111
review:
summary: TAS annotation from Reactome (phosphorylated SHC recruits GRB2:SOS1).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-508247
review:
summary: TAS annotation from Reactome (Gab2 binds p85 of PI3K). IL2RA is at the
plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-508282
review:
summary: TAS annotation from Reactome (SYK is a substrate for JAK1). IL2RA is
at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-508292
review:
summary: TAS annotation from Reactome (SYK binds IL2RB). IL2RA is at the plasma
membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5672965
review:
summary: TAS annotation from Reactome (RAS GEFs promote RAS nucleotide exchange).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8877396
review:
summary: TAS annotation from Reactome (IL2RA gene expression regulation by FOXP3/RUNX1).
This Reactome entry concerns transcriptional regulation of IL2RA itself, not
its localization. The plasma membrane annotation is still correct for the IL2RA
protein.
action: ACCEPT
reason: Correct. IL2RA protein is at the plasma membrane regardless of the specific
Reactome reaction annotated.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-912527
review:
summary: TAS annotation from Reactome (SHC1 mediates cytokine-induced GAB2 phosphorylation).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-913374
review:
summary: TAS annotation from Reactome (phosphorylated SHC1 recruits SHIP). IL2RA
is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-913424
review:
summary: TAS annotation from Reactome (SHC1:SHIP1 complex stabilized by GRB2).
IL2RA is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-919404
review:
summary: TAS annotation from Reactome (phosphorylated STAT5 is released). IL2RA
is at the plasma membrane.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein.
- term:
id: GO:0002664
label: regulation of T cell tolerance induction
evidence_type: IMP
original_reference_id: PMID:23416241
review:
summary: IMP annotation for regulation of T cell tolerance induction based on
the study of a human IL2RA null mutation (PMID:23416241, Goudy et al. 2013).
The CD25-deficient patient developed severe autoimmunity (enteropathy, erythrodermia)
with impaired immune tolerance, demonstrating that IL2RA is required for proper
T cell tolerance induction. The study shows that loss of CD25 surface expression
results in impaired Treg function and failure to maintain immune homeostasis.
action: ACCEPT
reason: This is a well-supported annotation from a detailed human genetic study.
The IMP evidence from a CD25-null patient directly demonstrates that IL2RA is
required for immune tolerance. Loss of CD25 leads to immunodeficiency with autoimmunity,
consistent with IL2RA's role in Treg homeostasis and tolerance induction.
supported_by:
- reference_id: PMID:23416241
supporting_text: we show that CD25 expression is required to maintain immune
homeostasis, and CD25 deficiency is a distinct immunological disease that
leads to both an autoimmune and immunodeficiency syndrome that clinically
resembles IPEX syndrome.
- reference_id: PMID:23416241
supporting_text: IL-2 consumption by FOXP3+ Tregs is a critical event to maintain
the homeostasis of the immune system, and the loss of CD25 surface expression
by FOXP3+ Tregs in CD25 deficient patients is likely a contributing factor
in the preferential CD8+ T cell proliferation, which are the mediators of
autoimmunity.
- term:
id: GO:0004911
label: interleukin-2 receptor activity
evidence_type: TAS
original_reference_id: PMID:9096364
review:
summary: TAS annotation for IL-2 receptor activity citing the first report of
human CD25 deficiency (Sharfe et al. 1997, PMID:9096364). This paper describes
a truncation mutation of IL2RA causing immunodeficiency, confirming IL2RA is
a functional component of the IL-2 receptor in humans.
action: ACCEPT
reason: Core function. IL2RA is the alpha subunit of the IL-2 receptor. PMID:9096364
provides human genetic evidence demonstrating its essential role.
supported_by:
- reference_id: PMID:9096364
supporting_text: We describe here a novel human immune aberration arising from
a truncation mutation of the interleukin-2 receptor alpha chain (CD25), a
subunit of the tripartite high-affinity receptor for interleukin 2.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: PMID:2467293
review:
summary: TAS annotation for plasma membrane localization citing Tsudo et al. 1989
(PMID:2467293). The paper studies IL-2 binding at the cell surface and describes
the alpha chain (p55) as a membrane receptor component.
action: ACCEPT
reason: Correct. IL2RA is a plasma membrane protein. This paper identifies IL2RA
(p55) as recognized by the anti-Tac mAb on the cell surface.
supported_by:
- reference_id: PMID:2467293
supporting_text: p55 (alpha chain), recognized by the anti-Tac monoclonal antibody
(mAb)
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: PMID:2983318
review:
summary: TAS annotation for plasma membrane localization citing Smith and Cantrell
1985 (PMID:2983318). This early paper on IL-2 receptor biology describes IL-2
binding sites and Tac antigen at the cell surface, confirming plasma membrane
localization.
action: ACCEPT
reason: Correct. IL2RA (Tac antigen) is at the plasma membrane.
supported_by:
- reference_id: PMID:2983318
supporting_text: The cell surface density of high-affinity membrane receptors
for the T-lymphocytotrophic hormone interleukin 2 (IL-2) determines the rate
of T-cell-cycle progression.
- term:
id: GO:0006915
label: apoptotic process
evidence_type: TAS
original_reference_id: PMID:9096364
review:
summary: TAS annotation for apoptotic process citing PMID:9096364. This paper
reports that CD25-deficient thymocytes fail to normally down-regulate bcl-2,
suggesting altered apoptotic regulation. However, the direct role of IL2RA in
apoptosis is indirect -- it is a consequence of impaired IL-2 signaling affecting
survival signals.
action: MARK_AS_OVER_ANNOTATED
reason: IL2RA does not directly regulate apoptosis. The altered bcl-2 expression
in CD25-null thymocytes (PMID:9096364) reflects impaired IL-2 signaling rather
than a direct apoptotic function of IL2RA. The apoptosis connection is a downstream
pleiotropic effect.
supported_by:
- reference_id: PMID:9096364
supporting_text: CD25-deficient cortical thymocytes do not express CD1, and
furthermore they fail to normally down-regulate levels of the anti-apoptotic
protein bcl-2.
- term:
id: GO:0006955
label: immune response
evidence_type: TAS
original_reference_id: PMID:9096364
review:
summary: TAS annotation for immune response citing PMID:9096364. IL2RA is clearly
involved in immune responses as a component of the IL-2 receptor. The CD25-deficient
patient showed profound cellular immunodeficiency.
action: ACCEPT
reason: Correct. IL2RA is essential for normal immune responses. CD25 deficiency
causes immunodeficiency (PMID:9096364).
supported_by:
- reference_id: PMID:9096364
supporting_text: Profound cellular immunodeficiency occurs as the result of
mutations in proteins involved in both the differentiation and function of
mature lymphoid cells.
- term:
id: GO:0007166
label: cell surface receptor signaling pathway
evidence_type: TAS
original_reference_id: PMID:2983318
review:
summary: TAS annotation for cell surface receptor signaling pathway citing Smith
and Cantrell 1985 (PMID:2983318). IL2RA participates in cell surface receptor
signaling as part of the IL-2 receptor complex. This is a very broad annotation;
more specific terms exist (IL-2-mediated signaling pathway, JAK-STAT signaling).
action: ACCEPT
reason: Correct but very general. IL2RA is part of the IL-2 receptor signaling
pathway at the cell surface. More specific annotations already capture this
(GO:0038110, GO:0007259). This broad IEA-level annotation is acceptable.
supported_by:
- reference_id: PMID:2983318
supporting_text: IL-2-receptor interactions actually promote the loss of IL-2
responsiveness by diminishing the density of high-affinity binding sites at
the time that Tac antigen levels are increased.
- term:
id: GO:0030159
label: signaling receptor complex adaptor activity
evidence_type: IDA
original_reference_id: PMID:16477002
review:
summary: 'IL2RA functions as a signaling receptor complex adaptor: it binds IL-2
and presents it to IL2RB/IL2RG to form the signaling-competent complex. The
crystal structure (PMID:16477002) shows IL2RA makes no contacts with IL2RB or
IL2RG; its role is to capture IL-2 and deliver it to the signaling subunits.
This adaptor/presentation role is a key aspect of IL2RA function not captured
by other annotations.'
action: NEW
reason: The current annotations do not capture IL2RA's specific role as a non-signaling
adaptor that assembles the signaling complex. GO:0030159 (signaling receptor
complex adaptor activity) describes the physical support role that IL2RA plays
in assembling the IL-2 signaling complex. The crystal structure demonstrates
that IL2RA makes no contacts with IL2RB or IL2RG, confirming its role as a ligand-capture
and presentation module rather than a signaling subunit.
supported_by:
- reference_id: PMID:16477002
supporting_text: IL-2R alpha makes no contacts with IL-2R beta or gamma(c),
and only minor changes are observed in the IL-2 structure in response to receptor
binding. These findings support the principal role of IL-2R alpha to deliver
IL-2 to the signaling complex and act as regulator of signal transduction.
- reference_id: PMID:16293754
supporting_text: the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding
site for presentation to IL-2Rbeta.
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
vocabulary mapping, accompanied by conservative changes to GO terms applied by
UniProt
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data to
orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:16293754
title: Structure of the quaternary complex of interleukin-2 with its alpha, beta,
and gammac receptors.
findings:
- statement: Crystal structure at 2.3 angstroms of IL-2 bound to IL2RA, IL2RB, and
IL2RG ectodomains
supporting_text: In the structure of the quaternary ectodomain complex as visualized
at a resolution of 2.3 angstroms, the binding of IL-2Ralpha to IL-2 stabilizes
a secondary binding site for presentation to IL-2Rbeta.
- statement: IL2RA binding to IL-2 stabilizes a secondary binding site for presentation
to IL2RB
supporting_text: the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding
site for presentation to IL-2Rbeta. gammac is then recruited to the composite
surface formed by the IL-2/IL-2Rbeta complex.
- statement: IL2RA makes no contacts with IL2RB or IL2RG
supporting_text: gammac is then recruited to the composite surface formed by the
IL-2/IL-2Rbeta complex. Consistent with its role as a shared receptor for IL-4,
IL-7, IL-9, IL-15, and IL-21, gammac forms degenerate contacts with IL-2.
- id: PMID:16477002
title: 'Crystal structure of the IL-2 signaling complex: paradigm for a heterotrimeric
cytokine receptor.'
findings:
- statement: Crystal structure at 3.0 angstroms of trimeric IL-2 receptor ectodomains
in complex with IL-2
supporting_text: Here, we describe the crystal structure of the trimeric assembly
of the human IL-2 receptor ectodomains in complex with IL-2 at 3.0 A resolution.
- statement: IL2RA forms the largest of the three IL-2/IL-2R interfaces
supporting_text: The IL-2R alpha subunit forms the largest of the three IL-2/IL-2R
interfaces, which, together with the high abundance of charge-charge interactions,
correlates well with the rapid association rate and high-affinity interaction
of IL-2R alpha with IL-2 at the cell surface.
- statement: IL2RA makes no contacts with IL2RB or gammac; its principal role is
to deliver IL-2 to the signaling complex
supporting_text: Surprisingly, IL-2R alpha makes no contacts with IL-2R beta or
gamma(c), and only minor changes are observed in the IL-2 structure in response
to receptor binding. These findings support the principal role of IL-2R alpha
to deliver IL-2 to the signaling complex and act as regulator of signal transduction.
- statement: Quaternary structure consistent with stepwise assembly from IL-2/IL2RA
to IL-2/IL2RA/IL2RB to full complex
supporting_text: The quaternary structure is consistent with a stepwise assembly
from IL-2/IL-2R alpha to IL-2/IL-2R alpha/IL-2R beta to IL-2/IL-2R alpha/IL-2R
beta/gamma(c).
- id: PMID:17032757
title: Hot-spot mimicry of a cytokine receptor by a small molecule.
findings:
- statement: Small molecule SP4206 (Kd ~70 nM) blocks IL2RA binding to IL-2
supporting_text: a high-affinity small molecule, SP4206 (Kd approximately 70 nM),
was found to block binding of the IL-2alpha receptor (IL-2Ralpha) to IL-2 (Kd
approximately 10 nM).
- statement: SP4206 targets same hot-spot residues on IL-2 that drive IL2RA binding
supporting_text: Mutational studies show that SP4206 targets virtually the same
critical "hot-spot" residues on IL-2 that drive binding of IL-2Ralpha.
- statement: Confirms the IL2RA-IL-2 binding interface through independent drug
discovery approach
supporting_text: our studies suggest that precise structural mimics of receptors
are not required for high-affinity binding of small molecules, and they show
that there are multiple solutions to tight binding at shared and adaptive hot
spots.
- id: PMID:22446627
title: Exploiting a natural conformational switch to engineer an interleukin-2 superkine.
findings:
- statement: Engineered IL-2 superkine with increased IL2RB affinity eliminates
functional requirement for CD25
supporting_text: we eliminated the functional requirement of IL-2 for CD25 expression
by engineering an IL-2 'superkine' (also called super-2) with increased binding
affinity for IL-2Rbeta.
- statement: CD25 expression determines cell sensitivity to IL-2; superkine bypasses
this requirement
supporting_text: Naive T cells express only a low density of IL-2Rbeta and IL-2Rgamma,
and are therefore relatively insensitive to IL-2, but acquire sensitivity after
CD25 expression, which captures the cytokine and presents it to IL-2Rbeta and
IL-2Rgamma.
- statement: On CD25-negative cells, superkine shows >10-fold improved signaling
potency over WT IL-2
supporting_text: On CD25- YT-1 cells, the EC50 of H9 and D10 were decreased over
10-fold (EC50 = 2.5 and 1.8 ng/mL, respectively) compared to IL-2 (EC50 = 39
ng/mL)
- statement: On CD25-positive cells, the difference between WT IL-2 and superkine
is minimal
supporting_text: On CD25+ YT-1 cells, the EC50 of IL-2 decreased over 50-fold
relative to CD25- YT-1 cells, from 39 to 0.66 ng/mL
- id: PMID:23416241
title: Human IL2RA null mutation mediates immunodeficiency with lymphoproliferation
and autoimmunity.
findings:
- statement: IL2RA null mutation (S166N) abrogates CD25 surface expression
supporting_text: The patient was homozygous for a c.497G>A transition in exon
4, leading to an amino acid substitution at codon 166 (S166N) of the protein.
- statement: Loss of CD25 causes immunodeficiency with lymphoproliferation and autoimmunity
(IMD41)
supporting_text: The chronic effect of this mutation led to the development of
progressive manifestations of both autoimmunity, such as enteropathy, erythrodermia
and severe alopecia, and immunodeficiency with chronic CMV infection.
- statement: CD25 expression is required to maintain immune homeostasis
supporting_text: In conclusion, we show that CD25 expression is required to maintain
immune homeostasis, and CD25 deficiency is a distinct immunological disease
that leads to both an autoimmune and immunodeficiency syndrome that clinically
resembles IPEX syndrome.
- statement: FOXP3+ Tregs remain present but quantitatively insufficient; still
first to respond to IL-2
supporting_text: CD25 null FOXP3+ Tregs from the patient were still the first
to respond to IL-2 (in vitro) albeit at higher concentrations than required
by healthy subject Tregs.
- statement: IL-2 signaling hierarchy is altered; CD8+ T cells become more reactive
than CD4+ T cells
supporting_text: CD25 deficiency altered the hierarchical signaling in response
to IL-2 in favor of CD8+ T cells over the CD4+ T cells, contrary to what is
observed in healthy subjects.
- statement: CD25 deficiency impairs Treg-mediated IL-2 consumption, a critical
tolerance mechanism
supporting_text: IL-2 consumption by FOXP3+ Tregs is a critical event to maintain
the homeostasis of the immune system, and the loss of CD25 surface expression
by FOXP3+ Tregs in CD25 deficient patients is likely a contributing factor in
the preferential CD8+ T cell proliferation, which are the mediators of autoimmunity.
- id: PMID:2467293
title: Characterization of the interleukin 2 receptor beta chain using three distinct
monoclonal antibodies.
findings:
- statement: High-affinity IL-2 receptor is a complex of p55 (alpha, CD25) and p75
(beta) chains
supporting_text: 'The human high-affinity receptor for interleukin 2 (IL-2) has
been proposed as being a membrane complex composed of at least two distinct
polypeptide chains: p55 (alpha chain), recognized by the anti-Tac monoclonal
antibody (mAb), and p75 (beta chain), both of which are capable of binding IL-2.'
- statement: Alpha chain alone is nonfunctional for signal transduction
supporting_text: Whereas the alpha chain itself has been shown to be nonfunctional,
the beta chain appears to be pivotal in the IL-2 signal transduction
- statement: Beta chain is indispensable for high-affinity binding and signal transduction
supporting_text: These results clearly indicate that the beta chain is an indispensable
component to the high-affinity IL-2 receptor and is responsible for the IL-2
signal transduction.
- statement: Blocking beta chain with Mik-beta 1 completely abolishes high-affinity
IL-2 binding
supporting_text: High-affinity IL-2 binding was completely abolished by Mik-beta
1.
- id: PMID:2983318
title: Interleukin 2 regulates its own receptors.
findings:
- statement: Cell surface density of high-affinity IL-2 receptors determines rate
of T-cell-cycle progression
supporting_text: The cell surface density of high-affinity membrane receptors
for the T-lymphocytotrophic hormone interleukin 2 (IL-2) determines the rate
of T-cell-cycle progression.
- statement: IL-2 binding promotes increase in Tac epitope expression but decreases
high-affinity binding sites
supporting_text: Addition of homogeneous immunoaffinity-purified IL-2 to cell
populations that expressed equivalent IL-2 and anti-Tac binding sites resulted
in a time- and temperature-dependent 8- to 10-fold enhancement of Tac epitope
expression and, simultaneously, a 20-30% diminishment of detectable high-affinity
IL-2 binding sites.
- statement: IL-2-receptor interactions promote loss of IL-2 responsiveness via
receptor downregulation
supporting_text: IL-2-receptor interactions actually promote the loss of IL-2
responsiveness by diminishing the density of high-affinity binding sites at
the time that Tac antigen levels are increased.
- id: PMID:9096364
title: Human immune disorder arising from mutation of the alpha chain of the interleukin-2
receptor.
findings:
- statement: First report of human CD25 deficiency
supporting_text: We describe here a novel human immune aberration arising from
a truncation mutation of the interleukin-2 receptor alpha chain (CD25), a subunit
of the tripartite high-affinity receptor for interleukin 2.
- statement: Truncation mutation of IL2RA causes profound cellular immunodeficiency
supporting_text: Profound cellular immunodeficiency occurs as the result of mutations
in proteins involved in both the differentiation and function of mature lymphoid
cells.
- statement: Decreased peripheral T cells with abnormal proliferation but normal
B cell development
supporting_text: This immunodeficiency is characterized by decreased numbers of
peripheral T cells displaying abnormal proliferation but normal B cell development.
- statement: Extensive lymphocytic infiltration of tissues with inflammation
supporting_text: Extensive lymphocytic infiltration of tissues, including lung,
liver, gut, and bone, is observed, accompanied by tissue atrophy and inflammation.
- statement: CD25-deficient thymocytes fail to down-regulate bcl-2
supporting_text: CD25-deficient cortical thymocytes do not express CD1, and furthermore
they fail to normally down-regulate levels of the anti-apoptotic protein bcl-2.
- id: Reactome:R-HSA-450027
title: Interleukin-2 receptor alpha:IL2 binds Interleukin-2 receptor beta
findings: []
- id: Reactome:R-HSA-450054
title: Interleukin-2 receptor alpha binds interleukin-2
findings: []
- id: Reactome:R-HSA-450063
title: 'Interleukin-2: IL2 receptor alpha:beta binds IL2 receptor gamma subunit'
findings: []
- id: Reactome:R-HSA-451942
title: Within the IL-2R complex JAK3 phosphorylates JAK1
findings: []
- id: Reactome:R-HSA-452091
title: Phosphorylation of IL2RB Y338 enables SHC recruitment
findings: []
- id: Reactome:R-HSA-452097
title: Recruited STAT5 is phosphorylated
findings: []
- id: Reactome:R-HSA-452100
title: SHC1 bound to IL2 receptor is phosphorylated
findings: []
- id: Reactome:R-HSA-452108
title: Phosphorylation of IL2RB Y338, Y392 or Y510 enables STAT recruitment
findings: []
- id: Reactome:R-HSA-452122
title: JAK1 phosphorylates Y338, Y392 and Y510 of IL2RB
findings: []
- id: Reactome:R-HSA-453104
title: Phosphorylated SHC1 recruits GRB2:GAB2
findings: []
- id: Reactome:R-HSA-453111
title: Phosphorylated SHC recruits GRB2:SOS1
findings: []
- id: Reactome:R-HSA-508247
title: Gab2 binds the p85 subunit of Class 1A PI3 kinases
findings: []
- id: Reactome:R-HSA-508282
title: SYK is a substrate for JAK1
findings: []
- id: Reactome:R-HSA-508292
title: SYK binds IL2RB
findings: []
- id: Reactome:R-HSA-5672965
title: RAS GEFs promote RAS nucleotide exchange
findings: []
- id: Reactome:R-HSA-8877396
title: IL2RA (CD25) gene expression is stimulated by FOXP3 and inhibited by RUNX1
findings: []
- id: Reactome:R-HSA-912527
title: SHC1 mediates cytokine-induced phosphorylation of GAB2
findings: []
- id: Reactome:R-HSA-913374
title: Phosphorylated SHC1 recruits SHIP
findings: []
- id: Reactome:R-HSA-913424
title: The SHC1:SHIP1 complex is stabilized by GRB2
findings: []
- id: Reactome:R-HSA-919404
title: Phosphorylated STAT5 is released
findings: []
core_functions:
- molecular_function:
id: GO:0019976
label: interleukin-2 binding
directly_involved_in:
- id: GO:0038110
label: interleukin-2-mediated signaling pathway
locations:
- id: GO:0009897
label: external side of plasma membrane
in_complex:
id: GO:0005893
label: interleukin-2 receptor complex
description: IL2RA directly binds IL-2 with low affinity (~10 nM Kd) through its
extracellular Sushi/CCP domains. This is the primary molecular function that enables
all downstream effects. The crystal structure (PMID:16477002) shows IL2RA forms
the largest interface with IL-2 among the three receptor chains. IL2RA captures
IL-2 and presents it to IL2RB, converting the intermediate-affinity beta/gamma
receptor (Kd ~1 nM) into the high-affinity trimeric receptor (Kd ~10 pM).
supported_by:
- reference_id: PMID:16477002
supporting_text: IL-2R alpha makes no contacts with IL-2R beta or gamma(c), and
only minor changes are observed in the IL-2 structure in response to receptor
binding. These findings support the principal role of IL-2R alpha to deliver
IL-2 to the signaling complex.
- reference_id: PMID:16293754
supporting_text: the binding of IL-2Ralpha to IL-2 stabilizes a secondary binding
site for presentation to IL-2Rbeta.
- molecular_function:
id: GO:0019976
label: interleukin-2 binding
contributes_to_molecular_function:
id: GO:0004911
label: interleukin-2 receptor activity
directly_involved_in:
- id: GO:0002664
label: regulation of T cell tolerance induction
locations:
- id: GO:0005886
label: plasma membrane
description: IL2RA on Tregs enables preferential IL-2 consumption and STAT5 signaling
at low IL-2 concentrations, maintaining Treg homeostasis and immune tolerance.
Its expression determines which cells respond to low IL-2 concentrations (constitutively
expressed on Tregs, induced on activated T cells), thereby gating access to the
IL-2 signaling pathway. Loss of IL2RA leads to autoimmunity (PMID:23416241).
supported_by:
- reference_id: PMID:23416241
supporting_text: we show that CD25 expression is required to maintain immune homeostasis,
and CD25 deficiency is a distinct immunological disease that leads to both an
autoimmune and immunodeficiency syndrome that clinically resembles IPEX syndrome.
- reference_id: PMID:22446627
supporting_text: Naive T cells express only a low density of IL-2Rbeta and IL-2Rgamma,
and are therefore relatively insensitive to IL-2, but acquire sensitivity after
CD25 expression, which captures the cytokine and presents it to IL-2Rbeta and
IL-2Rgamma.