ILF3

UniProt ID: Q12906
Organism: Homo sapiens
Review Status: INITIALIZED
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Gene Description

TODO: Add description for ILF3

Existing Annotations Review

GO Term Evidence Action Reason
GO:0003725 double-stranded RNA binding
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0003727 single-stranded RNA binding
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0046718 symbiont entry into host cell
IEA
GO_REF:0000108
PENDING
Summary: TODO: Review this GOA annotation
GO:0003677 DNA binding
IEA
GO_REF:0000043
PENDING
Summary: TODO: Review this GOA annotation
GO:0003723 RNA binding
IEA
GO_REF:0000043
PENDING
Summary: TODO: Review this GOA annotation
GO:0003725 double-stranded RNA binding
IEA
GO_REF:0000002
PENDING
Summary: TODO: Review this GOA annotation
GO:0005634 nucleus
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0005730 nucleolus
IEA
GO_REF:0000044
PENDING
Summary: TODO: Review this GOA annotation
GO:0005737 cytoplasm
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0051607 defense response to virus
IEA
GO_REF:0000043
PENDING
Summary: TODO: Review this GOA annotation
GO:0005515 protein binding
IPI
PMID:10749851
Protein-arginine methyltransferase I, the predominant protei...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10749851
Protein-arginine methyltransferase I, the predominant protein-arginine methyltransferase in cells, interacts with and is regulated by interleukin enhancer-binding factor 3.
GO:0005515 protein binding
IPI
PMID:18337511
NFAR-1 and -2 modulate translation and are required for effi...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18337511
NFAR-1 and -2 modulate translation and are required for efficient host defense.
GO:0005515 protein binding
IPI
PMID:21987769
DRBP76 associates with Ebola virus VP35 and suppresses viral...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21987769
DRBP76 associates with Ebola virus VP35 and suppresses viral polymerase function.
GO:0005515 protein binding
IPI
PMID:22810585
Viral immune modulators perturb the human molecular network ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22810585
Viral immune modulators perturb the human molecular network by common and unique strategies.
GO:0005515 protein binding
IPI
PMID:23853584
The interactomes of influenza virus NS1 and NS2 proteins ide...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23853584
Jul 4. The interactomes of influenza virus NS1 and NS2 proteins identify new host factors and provide insights for ADAR1 playing a supportive role in virus replication.
GO:0005515 protein binding
IPI
PMID:23976881
The HILDA complex coordinates a conditional switch in the 3'...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23976881
Aug 20. The HILDA complex coordinates a conditional switch in the 3'-untranslated region of the VEGFA mRNA.
GO:0005515 protein binding
IPI
PMID:35271311
OpenCell: Endogenous tagging for the cartography of human ce...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:35271311
2022 Mar 11. OpenCell: Endogenous tagging for the cartography of human cellular organization.
GO:0005515 protein binding
IPI
PMID:39251607
Systematic identification of post-transcriptional regulatory...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:39251607
Systematic identification of post-transcriptional regulatory modules.
GO:0017148 negative regulation of translation
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0045071 negative regulation of viral genome replication
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0005730 nucleolus
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0005739 mitochondrion
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0160091 spliceosome-depend formation of circular RNA
IDA
PMID:28625552
Coordinated circRNA Biogenesis and Function with NF90/NF110 ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28625552
Epub 2017 Jun 15. Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection.
GO:0005829 cytosol
TAS
Reactome:R-HSA-9834807
PENDING
Summary: TODO: Review this GOA annotation
GO:0005829 cytosol
TAS
Reactome:R-HSA-9836383
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9760399
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9760402
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9760652
PENDING
Summary: TODO: Review this GOA annotation
GO:0001618 virus receptor activity
IDA
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.
GO:0035925 mRNA 3'-UTR AU-rich region binding
IDA
PMID:14731398
Facilitation of mRNA deadenylation and decay by the exosome-...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14731398
Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU.
GO:0005515 protein binding
IPI
PMID:14731398
Facilitation of mRNA deadenylation and decay by the exosome-...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14731398
Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU.
GO:0005576 extracellular region
HDA
PMID:27068509
Extracellular matrix remodelling in response to venous hyper...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27068509
Apr 11. Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins.
GO:0005515 protein binding
IPI
PMID:24965446
Host factors that interact with the pestivirus N-terminal pr...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24965446
Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.
GO:0003725 double-stranded RNA binding
IDA
PMID:11777942
Exportin-5, a novel karyopherin, mediates nuclear export of ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11777942
Jan 3. Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins.
GO:0005515 protein binding
IPI
PMID:11777942
Exportin-5, a novel karyopherin, mediates nuclear export of ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11777942
Jan 3. Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins.
GO:0005634 nucleus
IDA
PMID:8885239
Identification of novel M phase phosphoproteins by expressio...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8885239
Identification of novel M phase phosphoproteins by expression cloning.
GO:0016020 membrane
HDA
PMID:19946888
Defining the membrane proteome of NK cells.
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19946888
Defining the membrane proteome of NK cells.
GO:0003723 RNA binding
HDA
PMID:22658674
Insights into RNA biology from an atlas of mammalian mRNA-bi...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22658674
May 31. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
GO:0003723 RNA binding
HDA
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
GO:0005634 nucleus
IDA
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.
GO:0005737 cytoplasm
IDA
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.
GO:0006468 protein phosphorylation
IDA
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent ...
REMOVE
Summary: MISANNOTATION: ILF3 (also known as NFAR) is NOT a kinase. PMID:21123651 title explicitly states "Phosphorylation of the NFAR proteins BY the dsRNA-dependent protein kinase PKR" - ILF3/NFAR is the SUBSTRATE being phosphorylated by PKR at Thr-188 and Thr-315. UniProt also notes ILF3 is a "nuclear phosphoprotein" (M-phase phosphoprotein 4) and describes it being "phosphorylated by the interferon-induced protein kinase, PKR". ILF3 is a dsRNA-binding protein, not an enzyme that performs phosphorylation.
Supporting Evidence:
PMID:21123651
Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.
GO:0017148 negative regulation of translation
ISS
GO_REF:0000024
PENDING
Summary: TODO: Review this GOA annotation
GO:0045071 negative regulation of viral genome replication
ISS
GO_REF:0000024
PENDING
Summary: TODO: Review this GOA annotation
GO:0005515 protein binding
IPI
PMID:17932509
Proteomic and functional analysis of Argonaute-containing mR...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17932509
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells.
GO:0005634 nucleus
IDA
PMID:10749851
Protein-arginine methyltransferase I, the predominant protei...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10749851
Protein-arginine methyltransferase I, the predominant protein-arginine methyltransferase in cells, interacts with and is regulated by interleukin enhancer-binding factor 3.
GO:1990904 ribonucleoprotein complex
IDA
PMID:17289661
Molecular composition of IMP1 ribonucleoprotein granules.
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17289661
Epub 2007 Feb 7. Molecular composition of IMP1 ribonucleoprotein granules.
GO:0003677 DNA binding
IDA
PMID:10574923
Autoantibodies define a family of proteins with conserved do...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10574923
Autoantibodies define a family of proteins with conserved double-stranded RNA-binding domains as well as DNA binding activity.
GO:0003677 DNA binding
IDA
PMID:7519613
Cloning and expression of cyclosporin A- and FK506-sensitive...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:7519613
Cloning and expression of cyclosporin A- and FK506-sensitive nuclear factor of activated T-cells: NF45 and NF90.
GO:0003725 double-stranded RNA binding
IDA
PMID:10574923
Autoantibodies define a family of proteins with conserved do...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10574923
Autoantibodies define a family of proteins with conserved double-stranded RNA-binding domains as well as DNA binding activity.
GO:0005515 protein binding
IPI
PMID:10574923
Autoantibodies define a family of proteins with conserved do...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10574923
Autoantibodies define a family of proteins with conserved double-stranded RNA-binding domains as well as DNA binding activity.
GO:0005515 protein binding
IPI
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells.
GO:0005515 protein binding
IPI
PMID:9442054
DNA-dependent protein kinase interacts with antigen receptor...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9442054
DNA-dependent protein kinase interacts with antigen receptor response element binding proteins NF90 and NF45.
GO:0005634 nucleus
IDA
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells.
GO:0005634 nucleus
IDA
PMID:7519613
Cloning and expression of cyclosporin A- and FK506-sensitive...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:7519613
Cloning and expression of cyclosporin A- and FK506-sensitive nuclear factor of activated T-cells: NF45 and NF90.
GO:0045892 negative regulation of DNA-templated transcription
IDA
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells.
GO:0045893 positive regulation of DNA-templated transcription
IDA
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11739746
The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells.
GO:0003723 RNA binding
NAS
PMID:10400669
DRBP76, a double-stranded RNA-binding nuclear protein, is ph...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10400669
DRBP76, a double-stranded RNA-binding nuclear protein, is phosphorylated by the interferon-induced protein kinase, PKR.
GO:0005634 nucleus
NAS
PMID:10400669
DRBP76, a double-stranded RNA-binding nuclear protein, is ph...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10400669
DRBP76, a double-stranded RNA-binding nuclear protein, is phosphorylated by the interferon-induced protein kinase, PKR.

References

Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Combined Automated Annotation using Multiple IEA Methods
DRBP76, a double-stranded RNA-binding nuclear protein, is phosphorylated by the interferon-induced protein kinase, PKR.
Autoantibodies define a family of proteins with conserved double-stranded RNA-binding domains as well as DNA binding activity.
Protein-arginine methyltransferase I, the predominant protein-arginine methyltransferase in cells, interacts with and is regulated by interleukin enhancer-binding factor 3.
The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells.
Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins.
Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU.
Molecular composition of IMP1 ribonucleoprotein granules.
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells.
NFAR-1 and -2 modulate translation and are required for efficient host defense.
Defining the membrane proteome of NK cells.
Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.
DRBP76 associates with Ebola virus VP35 and suppresses viral polymerase function.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Viral immune modulators perturb the human molecular network by common and unique strategies.
The interactomes of influenza virus NS1 and NS2 proteins identify new host factors and provide insights for ADAR1 playing a supportive role in virus replication.
The HILDA complex coordinates a conditional switch in the 3'-untranslated region of the VEGFA mRNA.
Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.
Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins.
Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection.
OpenCell: Endogenous tagging for the cartography of human cellular organization.
Systematic identification of post-transcriptional regulatory modules.
Cloning and expression of cyclosporin A- and FK506-sensitive nuclear factor of activated T-cells: NF45 and NF90.
Identification of novel M phase phosphoproteins by expression cloning.
DNA-dependent protein kinase interacts with antigen receptor response element binding proteins NF90 and NF45.
Reactome:R-HSA-9760399
ILF3 and HOXC8 bind CDH11 gene promoter
Reactome:R-HSA-9760402
ILF3 binds HOXC8
Reactome:R-HSA-9760652
ILF3 binds CDH11 gene promoter
Reactome:R-HSA-9834807
ILF3 binds PKR
Reactome:R-HSA-9836383
p-PKR dimer phosphorylates ILF3:ILF2

📄 View Raw YAML

id: Q12906
gene_symbol: ILF3
product_type: PROTEIN
status: INITIALIZED
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: 'TODO: Add description for ILF3'
alternative_products:
  - name: 1 (NFAR-2, ILF3-E)
    id: Q12906-1
  - name: 2 (NFAR-1, DRBP76)
    id: Q12906-2
    sequence_note: VSP_003888, VSP_003889
  - name: '3'
    id: Q12906-3
    sequence_note: VSP_003890, VSP_003891
  - name: 4 (DRBP76 Alpha, ILF3-A)
    id: Q12906-4
    sequence_note: VSP_003883, VSP_003884, VSP_003885
  - name: 5 (DRBP76 Delta, Gamma, ILF3-C)
    id: Q12906-5
    sequence_note: VSP_003886, VSP_003887
  - name: '6'
    id: Q12906-6
    sequence_note: VSP_003883, VSP_003888, VSP_003889
  - name: '7'
    id: Q12906-7
    sequence_note: VSP_003883
existing_annotations:
  - term:
      id: GO:0003725
      label: double-stranded RNA binding
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003727
      label: single-stranded RNA binding
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0046718
      label: symbiont entry into host cell
    evidence_type: IEA
    original_reference_id: GO_REF:0000108
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003677
      label: DNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000043
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003723
      label: RNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000043
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003725
      label: double-stranded RNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000002
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005730
      label: nucleolus
    evidence_type: IEA
    original_reference_id: GO_REF:0000044
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005737
      label: cytoplasm
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0051607
      label: defense response to virus
    evidence_type: IEA
    original_reference_id: GO_REF:0000043
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:10749851
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10749851
          supporting_text: Protein-arginine methyltransferase I, the predominant
            protein-arginine methyltransferase in cells, interacts with and is 
            regulated by interleukin enhancer-binding factor 3.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:18337511
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18337511
          supporting_text: NFAR-1 and -2 modulate translation and are required 
            for efficient host defense.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:21987769
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21987769
          supporting_text: DRBP76 associates with Ebola virus VP35 and 
            suppresses viral polymerase function.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:22810585
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22810585
          supporting_text: Viral immune modulators perturb the human molecular 
            network by common and unique strategies.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:23853584
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:23853584
          supporting_text: Jul 4. The interactomes of influenza virus NS1 and 
            NS2 proteins identify new host factors and provide insights for 
            ADAR1 playing a supportive role in virus replication.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:23976881
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:23976881
          supporting_text: Aug 20. The HILDA complex coordinates a conditional 
            switch in the 3'-untranslated region of the VEGFA mRNA.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:35271311
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:35271311
          supporting_text: '2022 Mar 11. OpenCell: Endogenous tagging for the cartography
            of human cellular organization.'
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:39251607
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:39251607
          supporting_text: Systematic identification of post-transcriptional 
            regulatory modules.
  - term:
      id: GO:0017148
      label: negative regulation of translation
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0045071
      label: negative regulation of viral genome replication
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005730
      label: nucleolus
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005739
      label: mitochondrion
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0160091
      label: spliceosome-depend formation of circular RNA
    evidence_type: IDA
    original_reference_id: PMID:28625552
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28625552
          supporting_text: Epub 2017 Jun 15. Coordinated circRNA Biogenesis and 
            Function with NF90/NF110 in Viral Infection.
  - term:
      id: GO:0005829
      label: cytosol
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9834807
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005829
      label: cytosol
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9836383
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9760399
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9760402
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9760652
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0001618
      label: virus receptor activity
    evidence_type: IDA
    original_reference_id: PMID:21123651
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21123651
          supporting_text: Phosphorylation of the NFAR proteins by the 
            dsRNA-dependent protein kinase PKR constitutes a novel mechanism of 
            translational regulation and cellular defense.
  - term:
      id: GO:0035925
      label: mRNA 3'-UTR AU-rich region binding
    evidence_type: IDA
    original_reference_id: PMID:14731398
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:14731398
          supporting_text: Facilitation of mRNA deadenylation and decay by the 
            exosome-bound, DExH protein RHAU.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:14731398
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:14731398
          supporting_text: Facilitation of mRNA deadenylation and decay by the 
            exosome-bound, DExH protein RHAU.
  - term:
      id: GO:0005576
      label: extracellular region
    evidence_type: HDA
    original_reference_id: PMID:27068509
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:27068509
          supporting_text: 'Apr 11. Extracellular matrix remodelling in response to
            venous hypertension: proteomics of human varicose veins.'
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:24965446
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:24965446
          supporting_text: Host factors that interact with the pestivirus 
            N-terminal protease, Npro, are components of the ribonucleoprotein 
            complex.
  - term:
      id: GO:0003725
      label: double-stranded RNA binding
    evidence_type: IDA
    original_reference_id: PMID:11777942
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11777942
          supporting_text: Jan 3. Exportin-5, a novel karyopherin, mediates 
            nuclear export of double-stranded RNA binding proteins.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:11777942
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11777942
          supporting_text: Jan 3. Exportin-5, a novel karyopherin, mediates 
            nuclear export of double-stranded RNA binding proteins.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:8885239
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:8885239
          supporting_text: Identification of novel M phase phosphoproteins by 
            expression cloning.
  - term:
      id: GO:0016020
      label: membrane
    evidence_type: HDA
    original_reference_id: PMID:19946888
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19946888
          supporting_text: Defining the membrane proteome of NK cells.
  - term:
      id: GO:0003723
      label: RNA binding
    evidence_type: HDA
    original_reference_id: PMID:22658674
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22658674
          supporting_text: May 31. Insights into RNA biology from an atlas of 
            mammalian mRNA-binding proteins.
  - term:
      id: GO:0003723
      label: RNA binding
    evidence_type: HDA
    original_reference_id: PMID:22681889
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22681889
          supporting_text: The mRNA-bound proteome and its global occupancy 
            profile on protein-coding transcripts.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:21123651
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21123651
          supporting_text: Phosphorylation of the NFAR proteins by the 
            dsRNA-dependent protein kinase PKR constitutes a novel mechanism of 
            translational regulation and cellular defense.
  - term:
      id: GO:0005737
      label: cytoplasm
    evidence_type: IDA
    original_reference_id: PMID:21123651
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21123651
          supporting_text: Phosphorylation of the NFAR proteins by the 
            dsRNA-dependent protein kinase PKR constitutes a novel mechanism of 
            translational regulation and cellular defense.
  - term:
      id: GO:0006468
      label: protein phosphorylation
    evidence_type: IDA
    original_reference_id: PMID:21123651
    review:
      summary: >-
        MISANNOTATION: ILF3 (also known as NFAR) is NOT a kinase. PMID:21123651 title
        explicitly states "Phosphorylation of the NFAR proteins BY the dsRNA-dependent
        protein kinase PKR" - ILF3/NFAR is the SUBSTRATE being phosphorylated by PKR
        at Thr-188 and Thr-315. UniProt also notes ILF3 is a "nuclear phosphoprotein"
        (M-phase phosphoprotein 4) and describes it being "phosphorylated by the
        interferon-induced protein kinase, PKR". ILF3 is a dsRNA-binding protein,
        not an enzyme that performs phosphorylation.
      action: REMOVE
      supported_by:
        - reference_id: PMID:21123651
          supporting_text: Phosphorylation of the NFAR proteins by the 
            dsRNA-dependent protein kinase PKR constitutes a novel mechanism of 
            translational regulation and cellular defense.
  - term:
      id: GO:0017148
      label: negative regulation of translation
    evidence_type: ISS
    original_reference_id: GO_REF:0000024
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0045071
      label: negative regulation of viral genome replication
    evidence_type: ISS
    original_reference_id: GO_REF:0000024
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:17932509
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17932509
          supporting_text: Proteomic and functional analysis of 
            Argonaute-containing mRNA-protein complexes in human cells.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:10749851
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10749851
          supporting_text: Protein-arginine methyltransferase I, the predominant
            protein-arginine methyltransferase in cells, interacts with and is 
            regulated by interleukin enhancer-binding factor 3.
  - term:
      id: GO:1990904
      label: ribonucleoprotein complex
    evidence_type: IDA
    original_reference_id: PMID:17289661
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17289661
          supporting_text: Epub 2007 Feb 7. Molecular composition of IMP1 
            ribonucleoprotein granules.
  - term:
      id: GO:0003677
      label: DNA binding
    evidence_type: IDA
    original_reference_id: PMID:10574923
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10574923
          supporting_text: Autoantibodies define a family of proteins with 
            conserved double-stranded RNA-binding domains as well as DNA binding
            activity.
  - term:
      id: GO:0003677
      label: DNA binding
    evidence_type: IDA
    original_reference_id: PMID:7519613
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:7519613
          supporting_text: 'Cloning and expression of cyclosporin A- and FK506-sensitive
            nuclear factor of activated T-cells: NF45 and NF90.'
  - term:
      id: GO:0003725
      label: double-stranded RNA binding
    evidence_type: IDA
    original_reference_id: PMID:10574923
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10574923
          supporting_text: Autoantibodies define a family of proteins with 
            conserved double-stranded RNA-binding domains as well as DNA binding
            activity.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:10574923
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10574923
          supporting_text: Autoantibodies define a family of proteins with 
            conserved double-stranded RNA-binding domains as well as DNA binding
            activity.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:11739746
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11739746
          supporting_text: The RNA binding protein nuclear factor 90 functions 
            as both a positive and negative regulator of gene expression in 
            mammalian cells.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:9442054
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:9442054
          supporting_text: DNA-dependent protein kinase interacts with antigen 
            receptor response element binding proteins NF90 and NF45.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:11739746
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11739746
          supporting_text: The RNA binding protein nuclear factor 90 functions 
            as both a positive and negative regulator of gene expression in 
            mammalian cells.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:7519613
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:7519613
          supporting_text: 'Cloning and expression of cyclosporin A- and FK506-sensitive
            nuclear factor of activated T-cells: NF45 and NF90.'
  - term:
      id: GO:0045892
      label: negative regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:11739746
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11739746
          supporting_text: The RNA binding protein nuclear factor 90 functions 
            as both a positive and negative regulator of gene expression in 
            mammalian cells.
  - term:
      id: GO:0045893
      label: positive regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:11739746
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:11739746
          supporting_text: The RNA binding protein nuclear factor 90 functions 
            as both a positive and negative regulator of gene expression in 
            mammalian cells.
  - term:
      id: GO:0003723
      label: RNA binding
    evidence_type: NAS
    original_reference_id: PMID:10400669
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10400669
          supporting_text: DRBP76, a double-stranded RNA-binding nuclear 
            protein, is phosphorylated by the interferon-induced protein kinase,
            PKR.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: NAS
    original_reference_id: PMID:10400669
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10400669
          supporting_text: DRBP76, a double-stranded RNA-binding nuclear 
            protein, is phosphorylated by the interferon-induced protein kinase,
            PKR.
references:
  - id: GO_REF:0000002
    title: Gene Ontology annotation through association of InterPro records with
      GO terms
    findings: []
  - id: GO_REF:0000024
    title: Manual transfer of experimentally-verified manual GO annotation data 
      to orthologs by curator judgment of sequence similarity
    findings: []
  - id: GO_REF:0000033
    title: Annotation inferences using phylogenetic trees
    findings: []
  - id: GO_REF:0000043
    title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword 
      mapping
    findings: []
  - id: GO_REF:0000044
    title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular 
      Location vocabulary mapping, accompanied by conservative changes to GO 
      terms applied by UniProt
    findings: []
  - id: GO_REF:0000052
    title: Gene Ontology annotation based on curation of immunofluorescence data
    findings: []
  - id: GO_REF:0000107
    title: Automatic transfer of experimentally verified manual GO annotation 
      data to orthologs using Ensembl Compara
    findings: []
  - id: GO_REF:0000108
    title: Automatic assignment of GO terms using logical inference, based on on
      inter-ontology links
    findings: []
  - id: GO_REF:0000120
    title: Combined Automated Annotation using Multiple IEA Methods
    findings: []
  - id: PMID:10400669
    title: DRBP76, a double-stranded RNA-binding nuclear protein, is 
      phosphorylated by the interferon-induced protein kinase, PKR.
    findings: []
  - id: PMID:10574923
    title: Autoantibodies define a family of proteins with conserved 
      double-stranded RNA-binding domains as well as DNA binding activity.
    findings: []
  - id: PMID:10749851
    title: Protein-arginine methyltransferase I, the predominant 
      protein-arginine methyltransferase in cells, interacts with and is 
      regulated by interleukin enhancer-binding factor 3.
    findings: []
  - id: PMID:11739746
    title: The RNA binding protein nuclear factor 90 functions as both a 
      positive and negative regulator of gene expression in mammalian cells.
    findings: []
  - id: PMID:11777942
    title: Exportin-5, a novel karyopherin, mediates nuclear export of 
      double-stranded RNA binding proteins.
    findings: []
  - id: PMID:14731398
    title: Facilitation of mRNA deadenylation and decay by the exosome-bound, 
      DExH protein RHAU.
    findings: []
  - id: PMID:17289661
    title: Molecular composition of IMP1 ribonucleoprotein granules.
    findings: []
  - id: PMID:17932509
    title: Proteomic and functional analysis of Argonaute-containing 
      mRNA-protein complexes in human cells.
    findings: []
  - id: PMID:18337511
    title: NFAR-1 and -2 modulate translation and are required for efficient 
      host defense.
    findings: []
  - id: PMID:19946888
    title: Defining the membrane proteome of NK cells.
    findings: []
  - id: PMID:21123651
    title: Phosphorylation of the NFAR proteins by the dsRNA-dependent protein 
      kinase PKR constitutes a novel mechanism of translational regulation and 
      cellular defense.
    findings: []
  - id: PMID:21987769
    title: DRBP76 associates with Ebola virus VP35 and suppresses viral 
      polymerase function.
    findings: []
  - id: PMID:22658674
    title: Insights into RNA biology from an atlas of mammalian mRNA-binding 
      proteins.
    findings: []
  - id: PMID:22681889
    title: The mRNA-bound proteome and its global occupancy profile on 
      protein-coding transcripts.
    findings: []
  - id: PMID:22810585
    title: Viral immune modulators perturb the human molecular network by common
      and unique strategies.
    findings: []
  - id: PMID:23853584
    title: The interactomes of influenza virus NS1 and NS2 proteins identify new
      host factors and provide insights for ADAR1 playing a supportive role in 
      virus replication.
    findings: []
  - id: PMID:23976881
    title: The HILDA complex coordinates a conditional switch in the 
      3'-untranslated region of the VEGFA mRNA.
    findings: []
  - id: PMID:24965446
    title: Host factors that interact with the pestivirus N-terminal protease, 
      Npro, are components of the ribonucleoprotein complex.
    findings: []
  - id: PMID:27068509
    title: 'Extracellular matrix remodelling in response to venous hypertension: proteomics
      of human varicose veins.'
    findings: []
  - id: PMID:28625552
    title: Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral 
      Infection.
    findings: []
  - id: PMID:35271311
    title: 'OpenCell: Endogenous tagging for the cartography of human cellular organization.'
    findings: []
  - id: PMID:39251607
    title: Systematic identification of post-transcriptional regulatory modules.
    findings: []
  - id: PMID:7519613
    title: 'Cloning and expression of cyclosporin A- and FK506-sensitive nuclear factor
      of activated T-cells: NF45 and NF90.'
    findings: []
  - id: PMID:8885239
    title: Identification of novel M phase phosphoproteins by expression 
      cloning.
    findings: []
  - id: PMID:9442054
    title: DNA-dependent protein kinase interacts with antigen receptor response
      element binding proteins NF90 and NF45.
    findings: []
  - id: Reactome:R-HSA-9760399
    title: ILF3 and HOXC8 bind CDH11 gene promoter
    findings: []
  - id: Reactome:R-HSA-9760402
    title: ILF3 binds HOXC8
    findings: []
  - id: Reactome:R-HSA-9760652
    title: ILF3 binds CDH11 gene promoter
    findings: []
  - id: Reactome:R-HSA-9834807
    title: ILF3 binds PKR
    findings: []
  - id: Reactome:R-HSA-9836383
    title: p-PKR dimer phosphorylates ILF3:ILF2
    findings: []