LPO encodes lactoperoxidase, a secreted, heme-dependent mammalian peroxidase expressed in salivary and mammary glands and in airway submucosal glands. In saliva, milk, and airway secretions, LPO uses hydrogen peroxide to oxidize thiocyanate to hypothiocyanous acid/hypothiocyanite, an antimicrobial oxidant that inhibits bacteria at mucosal surfaces. Human airway secretions contain LPO activity and support LPO-dependent antibacterial activity against several airway pathogens. LPO can also oxidize iodide and other donors under suitable chemical conditions, but thiocyanate is the best-supported physiological substrate and product partitioning depends on pH, peroxide supply, and competing substrates. The canonical precursor comprises a signal peptide at residues 1-26, a propeptide at residues 27-80, and a mature chain at residues 81-712. Human secretions contain both processed and partially unprocessed LPO, and the function of propeptide retention is unresolved. The mature enzyme binds heme and calcium and is glycosylated and disulfide-bonded. Autocatalytic peroxide-dependent covalent heme attachment and the detailed distal heme-pocket architecture are supported mainly by recombinant or non-human LPO studies; their transfer to human LPO is strongly supported by conservation but is not a direct endogenous-human structural observation. UniProt isoform 2 lacks residues 26-108, spanning the signal/ propeptide boundary and the N terminus of the canonical mature chain. Although a propeptide-deleted recombinant variant was secreted and active, the endogenous abundance, processing, localization, and physiological function of isoform 2 are not established.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005576
extracellular region
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
MGI:MGI:1916925
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
PANTHER:PTN000895746
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
RGD:1592081
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
UniProtKB:A1KZ92
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
UniProtKB:P05164
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
UniProtKB:P22079
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
UniProtKB:P80025
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
UniProtKB:Q92626
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
WB:WBGene00004256
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
WB:WBGene00004257
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
|
|
GO:0019731
antibacterial humoral response
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Antibacterial humoral response directly reflects secreted LPO generation of antimicrobial oxidants.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
PANTHER:PTN008518865
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed antibacterial humoral response assignment for human LPO.
UniProtKB:P80025
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed antibacterial humoral response assignment for human LPO.
|
|
GO:0036393
thiocyanate peroxidase activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Thiocyanate peroxidase activity is the most specific core activity of LPO, producing antimicrobial hypothiocyanous acid.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
PANTHER:PTN008518865
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment for human LPO.
UniProtKB:P22079
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment for human LPO.
UniProtKB:P80025
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment for human LPO.
|
|
GO:0004601
peroxidase activity
|
IEA
GO_REF:0000120 |
MODIFY |
Summary: The broad peroxidase assignment should be replaced by the substrate-specific core activity.
Reason: Peroxidase activity is directionally correct but less informative than the established LPO reaction. Human LPO's core chemistry is hydrogen-peroxide- dependent thiocyanate oxidation, captured specifically by GO:0036393.
Propagation Review
Root cause:
TERM SCOPING PROBLEM
Failure modes:
GRANULARITY MISMATCH
Sources checked:
UniProtKB:Q5SW46
SUPPORTS TRANSFER
The source supports peroxidase catalysis, but the transferred parent term is less informative than thiocyanate peroxidase activity for human LPO.
ensembl:ENSMUSP00000099466
SUPPORTS TRANSFER
The source supports peroxidase catalysis, but the transferred parent term is less informative than thiocyanate peroxidase activity for human LPO.
InterPro:IPR010255
SUPPORTS TRANSFER
The family mapping supports peroxidase catalysis, but the parent term underspecifies human LPO's thiocyanate reaction.
Proposed replacements:
thiocyanate peroxidase activity
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
UniProtKB-SubCell:SL-0243
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: The cytoplasm assignment is an over-propagated localization for a secretory-pathway protein.
Reason: LPO is synthesized with an N-terminal signal peptide and enters the secretory pathway before acting extracellularly. Synthesis of a precursor by cytosolic ribosomes does not establish cytoplasm as a location of the LPO protein or its activity.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
COMPARTMENT OR COMPLEX MISMATCH
Sources checked:
UniProtKB:Q5SW46
SUPPORTS SOURCE BUT NOT TARGET
The mouse donor does not establish cytoplasmic localization of human LPO.
ensembl:ENSMUSP00000099466
SUPPORTS SOURCE BUT NOT TARGET
The mouse donor does not establish cytoplasmic localization of human LPO.
UniProtKB-SubCell:SL-0086
SUPPORTS SOURCE BUT NOT TARGET
The generic cytoplasm mapping conflicts with LPO's signal-peptide-directed secretory localization.
|
|
GO:0006979
response to oxidative stress
|
IEA
GO_REF:0000002 |
MARK AS OVER ANNOTATED |
Summary: The annotation overstates the demonstrated role of LPO.
Reason: LPO uses hydrogen peroxide to generate reactive antimicrobial products, but this does not by itself establish LPO as a general cellular oxidative-stress response component.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
ROLE CONFLATION
Sources checked:
InterPro:IPR010255
SUPPORTS SOURCE BUT NOT TARGET
Exact WITH/FROM source; it does not establish the overextended response to oxidative stress role for human LPO.
|
|
GO:0018969
thiocyanate metabolic process
|
IEA
GO_REF:0000108 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Thiocyanate metabolism directly includes LPO-catalyzed oxidation of thiocyanate to hypothiocyanous acid.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
GO:0036393
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed thiocyanate metabolic process assignment for human LPO.
|
|
GO:0020037
heme binding
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Heme binding is essential to the mammalian peroxidase catalytic mechanism and is conserved in LPO.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
InterPro:IPR010255
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed heme binding assignment for human LPO.
|
|
GO:0036393
thiocyanate peroxidase activity
|
IEA
GO_REF:0000116 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Thiocyanate peroxidase activity is the most specific core activity of LPO, producing antimicrobial hypothiocyanous acid.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
RHEA:69416
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment for human LPO.
|
|
GO:0098869
cellular oxidant detoxification
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: The annotation overstates the demonstrated role of LPO.
Reason: Consumption of hydrogen peroxide during peroxidase catalysis does not establish a general cellular oxidant-detoxification role; LPO primarily generates antimicrobial oxidants extracellularly.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
ROLE CONFLATION
Sources checked:
GO:0004601
SUPPORTS SOURCE BUT NOT TARGET
Exact WITH/FROM source; it does not establish the overextended cellular oxidant detoxification role for human LPO.
GO:0140825
SUPPORTS SOURCE BUT NOT TARGET
Exact WITH/FROM source; it does not establish the overextended cellular oxidant detoxification role for human LPO.
|
|
GO:0140825
lactoperoxidase activity
|
IEA
GO_REF:0000120 |
KEEP AS NON CORE |
Summary: Retained as experimentally plausible alternate-donor peroxidase chemistry, but not as the core LPO reaction.
Reason: GO:0140825 denotes the phenolic-donor lactoperoxidase reaction represented by RHEA:56136/EC:1.11.1.7. LPO can oxidize alternate electron donors under suitable assay conditions, but the best-supported physiological core is extracellular thiocyanate oxidation to HOSCN/OSCN rather than this exact phenolic-donor reaction.
Propagation Review
Root cause:
NO FAILURE CORE
Sources checked:
RHEA:56136
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed lactoperoxidase activity assignment for human LPO.
EC:1.11.1.7
SUPPORTS TRANSFER
Exact WITH/FROM source consistent with the reviewed lactoperoxidase activity assignment for human LPO.
|
|
GO:0004601
peroxidase activity
|
IDA
PMID:6295491 The peroxidation of thiocyanate catalysed by myeloperoxidase... |
MODIFY |
Summary: The demonstrated reaction is better represented by thiocyanate peroxidase activity.
Reason: PMID:6295491 directly studies LPO-catalyzed conversion of thiocyanate to hypothiocyanite, and this source row carries matching hydrogen peroxide, thiocyanate, water, and hypothiocyanous-acid extensions. GO:0036393 captures that chemistry more informatively than the parent peroxidase term.
Proposed replacements:
thiocyanate peroxidase activity
Supporting Evidence:
PMID:6295491
Peroxidation of SCN- to OSCN-, catalysed by myeloperoxidase and lactoperoxidase, was studied.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-8855490 |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
|
|
GO:0005576
extracellular region
|
EXP
PMID:12626341 Lactoperoxidase and human airway host defense. |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Human airway secretions directly contained measurable LPO enzyme activity and LPO-sized immunoreactive bands, supporting extracellular localization.
Supporting Evidence:
PMID:12626341
The data showed that normal human airway secretions contained LPO enzyme activity (0.65 +/- 0.09 microg/mg secreted protein; n = 17), and Western blots of secretions demonstrated bands of the expected sizes for LPO.
|
|
GO:0005737
cytoplasm
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: The cytoplasm assignment is an over-propagated localization for a secretory-pathway protein.
Reason: LPO is synthesized with an N-terminal signal peptide and enters the secretory pathway before acting extracellularly. Synthesis of a precursor by cytosolic ribosomes does not establish cytoplasm as a location of the LPO protein or its activity.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
COMPARTMENT OR COMPLEX MISMATCH
Sources checked:
UniProtKB:Q5SW46
SUPPORTS SOURCE BUT NOT TARGET
The mouse donor does not establish cytoplasmic localization of human LPO.
|
|
GO:0001580
detection of chemical stimulus involved in sensory perception of bitter taste
|
IDA
PMID:24248522 Salivary protein profiles are linked to bitter taste accepta... |
MARK AS OVER ANNOTATED |
Summary: The annotation overstates the demonstrated role of LPO.
Reason: The study reports an association between salivary LPO abundance and infant bitter-solution acceptance, not direct chemical-stimulus detection by LPO; the causal sensory-process annotation overstates the evidence.
Supporting Evidence:
PMID:24248522
while higher abundance of bands containing lactoperoxidase, prolactin-inducible protein and S-type cystatins was associated to a higher bitterness acceptance.
|
|
GO:0005576
extracellular region
|
IDA
PMID:24248522 Salivary protein profiles are linked to bitter taste accepta... |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Lactoperoxidase-containing protein bands were identified from donated infant saliva, directly supporting LPO occurrence in this extracellular fluid.
Supporting Evidence:
PMID:24248522
Salivary proteins were separated by one-dimensional electrophoresis and bands were semi-quantified by image analysis. Partial least square (PLS) regression analyses were performed for each taste at both ages to explain intake ratios by band intensities. Bitterness acceptance in the younger infants was unique in the sense that salivary protein profiles could partly predict bitter taste acceptance. At that age, infants were on average indifferent to the 0.18-M urea solution, but great variability in acceptance was observed. The six bands considered as the best predictors for bitterness acceptance were identified by MALDI-TOF mass spectrometry. Higher abundance of bands containing secretory component, zinc-Ξ±-2-glycoprotein and carbonic anhydrase 6 was associated to a lower bitterness acceptance, while higher abundance of bands containing lactoperoxidase, prolactin-inducible protein and S-type cystatins was associated to a higher bitterness acceptance.
|
|
GO:0070062
extracellular exosome
|
HDA
PMID:19199708 Proteomic analysis of human parotid gland exosomes by multid... |
KEEP AS NON CORE |
Summary: Retained as a secondary localization context.
Reason: Detection in parotid exosome preparations is a high-throughput secretion-context observation and does not establish exosome-dependent LPO function. The experimental or curator-attributed assertion is retained with curator deference.
|
|
GO:0036393
thiocyanate peroxidase activity
|
IDA
PMID:12626341 Lactoperoxidase and human airway host defense. |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Human airway secretions contained LPO activity together with thiocyanate at concentrations sufficient for LPO catalysis, directly supporting the substrate-specific activity.
Supporting Evidence:
PMID:12626341
SCN-, LPO's substrate, was present in undiluted airway secretions at concentrations sufficient for LPO catalysis (0.46 +/- 0.19 mM; n = 8), and diluted secretions contained antibacterial activity with LPO-like properties.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:19059195 Molecular heterogeneity and alternative splicing of human la... |
KEEP AS NON CORE |
Summary: Retained as a secondary localization context.
Reason: Immunolocalization directly placed most total-LPO signal at the basolateral aspect of airway gland cells, a context-specific localization distinct from LPO's defining extracellular catalytic activity.
Supporting Evidence:
PMID:19059195
The vast majority of the anti-rhLPO antibody signal (Fig. 6B) was in the basolateral aspect of the cells whereas anti-Ex4p1 showed that proLPO was homogeneously distributed throughout the cells (Fig. 6F).
|
|
GO:0042742
defense response to bacterium
|
IDA
PMID:12626341 Lactoperoxidase and human airway host defense. |
ACCEPT |
Summary: Accepted as core LPO biology.
Reason: Human airway experiments demonstrate LPO-dependent antibacterial activity against multiple bacterial pathogens. The experimental or curator-attributed assertion is retained with curator deference.
Supporting Evidence:
PMID:12626341
Thus, a functional LPO system exists in human airways and may contribute to airway host defense against infection.
|
|
GO:0006979
response to oxidative stress
|
NAS
PMID:8964511 Cloning and sequence analysis of the human salivary peroxida... |
MARK AS OVER ANNOTATED |
Summary: The annotation overstates the demonstrated role of LPO.
Reason: LPO uses hydrogen peroxide to generate reactive antimicrobial products, but this does not by itself establish LPO as a general cellular oxidative-stress response component.
|
Q: Which molecular forms and processing states of LPO predominate in human saliva, milk, and airway surface liquid?
Q: Is UniProt isoform 2 translated and secreted endogenously, and does its residues 26-108 deletion alter heme loading, stability, or catalysis?
Q: How is covalent heme attachment established in human LPO, and what fraction of endogenous enzyme carries fully matured heme?
Q: How do physiological pH, peroxide delivery, and competing donors determine HOSCN/OSCN, HOI, and other oxidant production in each secretion?
Q: Which epithelial peroxide-generating system supplies LPO in each tissue, and is coupling based on proximity or on diffusible peroxide alone?
Q: Does reversible aggregation modulate LPO persistence or antimicrobial activity in native human secretions?
Experiment: Apply isoform-resolved targeted proteomics and N-terminomics to fresh human saliva, milk, and airway surface liquid to quantify canonical, propeptide- retaining, and residues-26-108-deleted LPO forms.
Hypothesis: LPO processing and isoform abundance differ by secretory tissue, with canonical mature LPO predominant but measurable incompletely processed forms.
Experiment: Use CRISPR-edited human salivary- and airway-gland organoids to express each endogenous LPO splice form separately and measure secretion, heme loading, thiocyanate turnover, and bacterial killing.
Hypothesis: The residues-26-108 deletion changes LPO maturation or stability even if the secreted protein retains measurable peroxidase activity.
Experiment: Analyze affinity-purified endogenous human LPO by intact-mass spectrometry, heme-peptide mapping, and structural spectroscopy.
Hypothesis: Endogenous human LPO carries the conserved covalent heme architecture inferred from recombinant and non-human lactoperoxidases.
Experiment: Reconstitute human LPO at secretion-matched concentrations while varying pH, hydrogen-peroxide flux, thiocyanate, iodide, bromide, and urate, and quantify products by orthogonal chemical assays.
Hypothesis: Thiocyanate dominates at basal physiological concentrations, whereas donor competition and pH shift oxidant partitioning in a tissue-specific manner.
Experiment: Perturb DUOX enzymes and LPO independently in differentiated human airway and salivary organoids, then measure extracellular peroxide, HOSCN/OSCN, and pathogen survival with genetic rescue controls.
Hypothesis: Epithelial DUOX activity supplies peroxide required for LPO-dependent antimicrobial chemistry at mucosal surfaces.
What is not known β curated, literature-grounded statements of the open unknowns (the inverse of core functions).
Gap: The occupancy, covalent attachment, and maturation pathway of heme in endogenous human LPO have not been established directly; key mechanistic and structural assignments derive from recombinant or non-human LPO.
Gap: The abundance and processing of canonical LPO, incompletely processed LPO, and UniProt isoform 2 across saliva, milk, and airway secretions are unknown. Isoform 2 deletes residues 26-108, extending beyond the annotated propeptide into the canonical mature chain, so activity of a recombinant propeptide-deleted construct does not establish its endogenous function.
Gap: Physiological partitioning among thiocyanate, iodide, bromide, urate, and other donors remains incompletely quantified under the pH, peroxide flux, and substrate concentrations found in different human secretions.
Gap: The tissue-specific peroxide sources and physical or functional coupling of LPO to DUOX-family oxidases in salivary, mammary, and airway epithelia remain incompletely resolved.
Gap: The biological effects of propeptide removal or retention on LPO folding, secretion, stability, and antimicrobial activity are not known.
Gap: Human salivary preparations contain monomeric and reversibly aggregated LPO, but the native oligomeric state and physiological significance of this behavior in intact secretions are unresolved.
Provider deep research was skipped as permitted for this phase; no provider-named deep-research file was created. I audited every seeded PMID/cache and searched PubMed for primary studies covering LPO catalytic chemistry, covalent heme maturation, structure, secretion, antimicrobial activity, substrate scope, molecular forms, and human splice variants. Decisive additional records were fetched with the project's just fetch-pmid tooling. Claims below retain the experimental species and system because much of the detailed structural and kinetic literature uses non-human LPO.
id: P22079
gene_symbol: LPO
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
LPO encodes lactoperoxidase, a secreted, heme-dependent mammalian peroxidase
expressed in salivary and mammary glands and in airway submucosal glands. In
saliva, milk, and airway secretions, LPO uses hydrogen peroxide to oxidize
thiocyanate to hypothiocyanous acid/hypothiocyanite, an antimicrobial oxidant
that inhibits bacteria at mucosal surfaces. Human airway secretions contain LPO
activity and support LPO-dependent antibacterial activity against several airway
pathogens. LPO can also oxidize iodide and other donors under suitable chemical
conditions, but thiocyanate is the best-supported physiological substrate and
product partitioning depends on pH, peroxide supply, and competing substrates.
The canonical precursor comprises a signal peptide at residues 1-26, a propeptide
at residues 27-80, and a mature chain at residues 81-712. Human secretions contain
both processed and partially unprocessed LPO, and the function of propeptide
retention is unresolved. The mature enzyme binds heme and calcium and is
glycosylated and disulfide-bonded. Autocatalytic peroxide-dependent covalent heme
attachment and the detailed distal heme-pocket architecture are supported mainly
by recombinant or non-human LPO studies; their transfer to human LPO is strongly
supported by conservation but is not a direct endogenous-human structural
observation. UniProt isoform 2 lacks residues 26-108, spanning the signal/
propeptide boundary and the N terminus of the canonical mature chain. Although a
propeptide-deleted recombinant variant was secreted and active, the endogenous
abundance, processing, localization, and physiological function of isoform 2 are
not established.
alternative_products:
- name: '1'
id: P22079-1
- name: 2 (V3)
id: P22079-2
sequence_note: VSP_044473
existing_annotations:
- term:
id: GO:0005576
label: extracellular region
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: MGI:MGI:1916925
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: PANTHER:PTN000895746
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: RGD:1592081
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: UniProtKB:A1KZ92
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: UniProtKB:P05164
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: UniProtKB:P22079
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: UniProtKB:P80025
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: UniProtKB:Q92626
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: WB:WBGene00004256
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
- source_id: WB:WBGene00004257
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
supporting_entities:
- MGI:MGI:1916925
- PANTHER:PTN000895746
- RGD:1592081
- UniProtKB:A1KZ92
- UniProtKB:P05164
- UniProtKB:P22079
- UniProtKB:P80025
- UniProtKB:Q92626
- WB:WBGene00004256
- WB:WBGene00004257
- term:
id: GO:0019731
label: antibacterial humoral response
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Antibacterial humoral response directly reflects secreted LPO generation of antimicrobial oxidants.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: PANTHER:PTN008518865
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed antibacterial humoral response assignment for
human LPO.
- source_id: UniProtKB:P80025
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed antibacterial humoral response assignment for
human LPO.
supporting_entities:
- PANTHER:PTN008518865
- UniProtKB:P80025
- term:
id: GO:0036393
label: thiocyanate peroxidase activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Thiocyanate peroxidase activity is the most specific core activity of LPO, producing antimicrobial hypothiocyanous
acid.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: PANTHER:PTN008518865
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment
for human LPO.
- source_id: UniProtKB:P22079
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment
for human LPO.
- source_id: UniProtKB:P80025
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment
for human LPO.
supporting_entities:
- PANTHER:PTN008518865
- UniProtKB:P22079
- UniProtKB:P80025
- term:
id: GO:0004601
label: peroxidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: The broad peroxidase assignment should be replaced by the substrate-specific core activity.
action: MODIFY
reason: >-
Peroxidase activity is directionally correct but less informative than the
established LPO reaction. Human LPO's core chemistry is hydrogen-peroxide-
dependent thiocyanate oxidation, captured specifically by GO:0036393.
proposed_replacement_terms:
- id: GO:0036393
label: thiocyanate peroxidase activity
propagation_review:
root_cause: TERM_SCOPING_PROBLEM
failure_modes:
- GRANULARITY_MISMATCH
source_entities:
- source_id: UniProtKB:Q5SW46
source_status: SUPPORTS_TRANSFER
comment: The source supports peroxidase catalysis, but the transferred parent term is less informative than thiocyanate peroxidase activity for human LPO.
- source_id: ensembl:ENSMUSP00000099466
source_status: SUPPORTS_TRANSFER
comment: The source supports peroxidase catalysis, but the transferred parent term is less informative than thiocyanate peroxidase activity for human LPO.
- source_id: InterPro:IPR010255
source_status: SUPPORTS_TRANSFER
comment: The family mapping supports peroxidase catalysis, but the parent term underspecifies human LPO's thiocyanate reaction.
supporting_entities:
- UniProtKB:Q5SW46
- ensembl:ENSMUSP00000099466
- InterPro:IPR010255
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000044
qualifier: located_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: UniProtKB-SubCell:SL-0243
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed extracellular region assignment for human LPO.
supporting_entities:
- UniProtKB-SubCell:SL-0243
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: located_in
review:
summary: The cytoplasm assignment is an over-propagated localization for a secretory-pathway protein.
action: MARK_AS_OVER_ANNOTATED
reason: >-
LPO is synthesized with an N-terminal signal peptide and enters the secretory
pathway before acting extracellularly. Synthesis of a precursor by cytosolic
ribosomes does not establish cytoplasm as a location of the LPO protein or its
activity.
propagation_review:
root_cause: PROPAGATION_BAD
failure_modes:
- COMPARTMENT_OR_COMPLEX_MISMATCH
source_entities:
- source_id: UniProtKB:Q5SW46
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: The mouse donor does not establish cytoplasmic localization of human LPO.
- source_id: ensembl:ENSMUSP00000099466
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: The mouse donor does not establish cytoplasmic localization of human LPO.
- source_id: UniProtKB-SubCell:SL-0086
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: The generic cytoplasm mapping conflicts with LPO's signal-peptide-directed secretory localization.
supporting_entities:
- UniProtKB:Q5SW46
- ensembl:ENSMUSP00000099466
- UniProtKB-SubCell:SL-0086
- term:
id: GO:0006979
label: response to oxidative stress
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: involved_in
review:
summary: The annotation overstates the demonstrated role of LPO.
action: MARK_AS_OVER_ANNOTATED
reason: LPO uses hydrogen peroxide to generate reactive antimicrobial products, but this does not by itself
establish LPO as a general cellular oxidative-stress response component.
propagation_review:
root_cause: PROPAGATION_BAD
source_entities:
- source_id: InterPro:IPR010255
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: Exact WITH/FROM source; it does not establish the overextended response to oxidative stress role
for human LPO.
failure_modes:
- ROLE_CONFLATION
supporting_entities:
- InterPro:IPR010255
- term:
id: GO:0018969
label: thiocyanate metabolic process
evidence_type: IEA
original_reference_id: GO_REF:0000108
qualifier: involved_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Thiocyanate metabolism directly includes LPO-catalyzed oxidation of thiocyanate to hypothiocyanous acid.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: GO:0036393
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed thiocyanate metabolic process assignment for
human LPO.
supporting_entities:
- GO:0036393
- term:
id: GO:0020037
label: heme binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: enables
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Heme binding is essential to the mammalian peroxidase catalytic mechanism and is conserved in LPO.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: InterPro:IPR010255
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed heme binding assignment for human LPO.
supporting_entities:
- InterPro:IPR010255
- term:
id: GO:0036393
label: thiocyanate peroxidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000116
qualifier: enables
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Thiocyanate peroxidase activity is the most specific core activity of LPO, producing antimicrobial hypothiocyanous
acid.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: RHEA:69416
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed thiocyanate peroxidase activity assignment
for human LPO.
supporting_entities:
- RHEA:69416
- term:
id: GO:0098869
label: cellular oxidant detoxification
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: involved_in
review:
summary: The annotation overstates the demonstrated role of LPO.
action: MARK_AS_OVER_ANNOTATED
reason: Consumption of hydrogen peroxide during peroxidase catalysis does not establish a general cellular oxidant-detoxification
role; LPO primarily generates antimicrobial oxidants extracellularly.
propagation_review:
root_cause: PROPAGATION_BAD
source_entities:
- source_id: GO:0004601
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: Exact WITH/FROM source; it does not establish the overextended cellular oxidant detoxification
role for human LPO.
- source_id: GO:0140825
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: Exact WITH/FROM source; it does not establish the overextended cellular oxidant detoxification
role for human LPO.
failure_modes:
- ROLE_CONFLATION
supporting_entities:
- GO:0004601
- GO:0140825
- term:
id: GO:0140825
label: lactoperoxidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: enables
review:
summary: Retained as experimentally plausible alternate-donor peroxidase chemistry, but not as the core LPO reaction.
action: KEEP_AS_NON_CORE
reason: >-
GO:0140825 denotes the phenolic-donor lactoperoxidase reaction represented by
RHEA:56136/EC:1.11.1.7. LPO can oxidize alternate electron donors under suitable
assay conditions, but the best-supported physiological core is extracellular
thiocyanate oxidation to HOSCN/OSCN rather than this exact phenolic-donor reaction.
propagation_review:
root_cause: NO_FAILURE_CORE
source_entities:
- source_id: RHEA:56136
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed lactoperoxidase activity assignment for human
LPO.
- source_id: EC:1.11.1.7
source_status: SUPPORTS_TRANSFER
comment: Exact WITH/FROM source consistent with the reviewed lactoperoxidase activity assignment for human
LPO.
supporting_entities:
- RHEA:56136
- EC:1.11.1.7
- term:
id: GO:0004601
label: peroxidase activity
evidence_type: IDA
original_reference_id: PMID:6295491
qualifier: enables
review:
summary: The demonstrated reaction is better represented by thiocyanate peroxidase activity.
action: MODIFY
reason: >-
PMID:6295491 directly studies LPO-catalyzed conversion of thiocyanate to
hypothiocyanite, and this source row carries matching hydrogen peroxide,
thiocyanate, water, and hypothiocyanous-acid extensions. GO:0036393 captures
that chemistry more informatively than the parent peroxidase term.
proposed_replacement_terms:
- id: GO:0036393
label: thiocyanate peroxidase activity
supported_by:
- reference_id: PMID:6295491
supporting_text: Peroxidation of SCN- to OSCN-, catalysed by myeloperoxidase and lactoperoxidase, was studied.
extensions:
- predicate: RO:0002233
term:
id: CHEBI:16240
label: hydrogen peroxide
- predicate: RO:0002233
term:
id: CHEBI:18022
label: thiocyanate
- predicate: RO:0002234
term:
id: CHEBI:15377
label: water
- predicate: RO:0002234
term:
id: CHEBI:133907
label: hypothiocyanous acid
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8855490
qualifier: located_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: LPO is a secreted enzyme that functions in extracellular airway, salivary, and mammary secretions.
- term:
id: GO:0005576
label: extracellular region
evidence_type: EXP
original_reference_id: PMID:12626341
qualifier: located_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Human airway secretions directly contained measurable LPO enzyme activity and LPO-sized immunoreactive bands, supporting extracellular localization.
supported_by:
- reference_id: PMID:12626341
supporting_text: The data showed that normal human airway secretions contained LPO enzyme activity (0.65 +/- 0.09 microg/mg secreted protein; n = 17), and Western blots of secretions demonstrated bands of the expected sizes for LPO.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISS
original_reference_id: GO_REF:0000024
qualifier: located_in
review:
summary: The cytoplasm assignment is an over-propagated localization for a secretory-pathway protein.
action: MARK_AS_OVER_ANNOTATED
reason: >-
LPO is synthesized with an N-terminal signal peptide and enters the secretory
pathway before acting extracellularly. Synthesis of a precursor by cytosolic
ribosomes does not establish cytoplasm as a location of the LPO protein or its
activity.
propagation_review:
root_cause: PROPAGATION_BAD
failure_modes:
- COMPARTMENT_OR_COMPLEX_MISMATCH
source_entities:
- source_id: UniProtKB:Q5SW46
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: The mouse donor does not establish cytoplasmic localization of human LPO.
supporting_entities:
- UniProtKB:Q5SW46
- term:
id: GO:0001580
label: detection of chemical stimulus involved in sensory perception of bitter taste
evidence_type: IDA
original_reference_id: PMID:24248522
qualifier: involved_in
review:
summary: The annotation overstates the demonstrated role of LPO.
action: MARK_AS_OVER_ANNOTATED
reason: The study reports an association between salivary LPO abundance and infant bitter-solution acceptance,
not direct chemical-stimulus detection by LPO; the causal sensory-process annotation overstates the evidence.
supported_by:
- reference_id: PMID:24248522
supporting_text: while higher abundance of bands containing lactoperoxidase, prolactin-inducible protein and S-type
cystatins was associated to a higher bitterness acceptance.
- term:
id: GO:0005576
label: extracellular region
evidence_type: IDA
original_reference_id: PMID:24248522
qualifier: located_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Lactoperoxidase-containing protein bands were identified from donated infant saliva, directly supporting LPO occurrence in this extracellular fluid.
supported_by:
- reference_id: PMID:24248522
supporting_text: >-
Salivary proteins were separated by one-dimensional electrophoresis and bands were semi-quantified by image analysis. Partial least square (PLS) regression analyses were performed for each taste at both ages to explain intake ratios by band intensities. Bitterness acceptance in the younger infants was unique in the sense that salivary protein profiles could partly predict bitter taste acceptance. At that age, infants were on average indifferent to the 0.18-M urea solution, but great variability in acceptance was observed. The six bands considered as the best predictors for bitterness acceptance were identified by MALDI-TOF mass spectrometry. Higher abundance of bands containing secretory component, zinc-Ξ±-2-glycoprotein and carbonic anhydrase 6 was associated to a lower bitterness acceptance, while higher abundance of bands containing lactoperoxidase, prolactin-inducible protein and S-type cystatins was associated to a higher bitterness acceptance.
extensions:
- predicate: BFO:0000050
term:
id: UBERON:0001836
label: saliva
- term:
id: GO:0070062
label: extracellular exosome
evidence_type: HDA
original_reference_id: PMID:19199708
qualifier: located_in
review:
summary: Retained as a secondary localization context.
action: KEEP_AS_NON_CORE
reason: Detection in parotid exosome preparations is a high-throughput secretion-context observation and does
not establish exosome-dependent LPO function. The experimental or curator-attributed assertion is retained
with curator deference.
extensions:
- predicate: BFO:0000050
term:
id: UBERON:0001831
label: parotid gland
- term:
id: GO:0036393
label: thiocyanate peroxidase activity
evidence_type: IDA
original_reference_id: PMID:12626341
qualifier: enables
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Human airway secretions contained LPO activity together with thiocyanate at concentrations sufficient for LPO catalysis, directly supporting the substrate-specific activity.
supported_by:
- reference_id: PMID:12626341
supporting_text: SCN-, LPO's substrate, was present in undiluted airway secretions at concentrations sufficient for LPO catalysis (0.46 +/- 0.19 mM; n = 8), and diluted secretions contained antibacterial activity with LPO-like properties.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:19059195
qualifier: located_in
review:
summary: Retained as a secondary localization context.
action: KEEP_AS_NON_CORE
reason: Immunolocalization directly placed most total-LPO signal at the basolateral aspect of airway gland cells, a context-specific localization distinct from LPO's defining extracellular catalytic activity.
supported_by:
- reference_id: PMID:19059195
supporting_text: The vast majority of the anti-rhLPO antibody signal (Fig. 6B) was in the basolateral aspect of the cells whereas anti-Ex4p1 showed that proLPO was homogeneously distributed throughout the cells (Fig. 6F).
extensions:
- predicate: BFO:0000050
term:
id: UBERON:0003126
label: trachea
- term:
id: GO:0042742
label: defense response to bacterium
evidence_type: IDA
original_reference_id: PMID:12626341
qualifier: involved_in
review:
summary: Accepted as core LPO biology.
action: ACCEPT
reason: Human airway experiments demonstrate LPO-dependent antibacterial activity against multiple bacterial
pathogens. The experimental or curator-attributed assertion is retained with curator deference.
supported_by:
- reference_id: PMID:12626341
supporting_text: Thus, a functional LPO system exists in human airways and may contribute to airway host defense
against infection.
- term:
id: GO:0006979
label: response to oxidative stress
evidence_type: NAS
original_reference_id: PMID:8964511
qualifier: involved_in
review:
summary: The annotation overstates the demonstrated role of LPO.
action: MARK_AS_OVER_ANNOTATED
reason: LPO uses hydrogen peroxide to generate reactive antimicrobial products, but this does not by itself
establish LPO as a general cellular oxidative-stress response component.
core_functions:
- description: >-
Catalyzes the extracellular hydrogen-peroxide-dependent oxidation of
thiocyanate to hypothiocyanous acid/hypothiocyanite in mucosal secretions.
This oxidant-generating chemistry contributes directly to antibacterial
humoral defense in saliva, milk, and the airway surface liquid. The core
assignment does not extend to every alternative donor observed in vitro or
to broad downstream oxidative-stress phenotypes.
molecular_function:
id: GO:0036393
label: thiocyanate peroxidase activity
directly_involved_in:
- id: GO:0019731
label: antibacterial humoral response
locations:
- id: GO:0005576
label: extracellular region
supported_by:
- reference_id: PMID:6295491
supporting_text: Peroxidation of SCN- to OSCN-, catalysed by myeloperoxidase and lactoperoxidase, was studied.
- reference_id: PMID:12626341
supporting_text: Thus, a functional LPO system exists in human airways and may contribute to airway host defense against infection.
knowledge_gaps:
- gap_statement: >-
The occupancy, covalent attachment, and maturation pathway of heme in
endogenous human LPO have not been established directly; key mechanistic and
structural assignments derive from recombinant or non-human LPO.
- gap_statement: >-
The abundance and processing of canonical LPO, incompletely processed LPO,
and UniProt isoform 2 across saliva, milk, and airway secretions are unknown.
Isoform 2 deletes residues 26-108, extending beyond the annotated propeptide
into the canonical mature chain, so activity of a recombinant
propeptide-deleted construct does not establish its endogenous function.
- gap_statement: >-
Physiological partitioning among thiocyanate, iodide, bromide, urate, and
other donors remains incompletely quantified under the pH, peroxide flux,
and substrate concentrations found in different human secretions.
- gap_statement: >-
The tissue-specific peroxide sources and physical or functional coupling of
LPO to DUOX-family oxidases in salivary, mammary, and airway epithelia remain
incompletely resolved.
- gap_statement: >-
The biological effects of propeptide removal or retention on LPO folding,
secretion, stability, and antimicrobial activity are not known.
- gap_statement: >-
Human salivary preparations contain monomeric and reversibly aggregated LPO,
but the native oligomeric state and physiological significance of this
behavior in intact secretions are unresolved.
proposed_new_terms: []
suggested_questions:
- question: >-
Which molecular forms and processing states of LPO predominate in human
saliva, milk, and airway surface liquid?
- question: >-
Is UniProt isoform 2 translated and secreted endogenously, and does its
residues 26-108 deletion alter heme loading, stability, or catalysis?
- question: >-
How is covalent heme attachment established in human LPO, and what fraction
of endogenous enzyme carries fully matured heme?
- question: >-
How do physiological pH, peroxide delivery, and competing donors determine
HOSCN/OSCN, HOI, and other oxidant production in each secretion?
- question: >-
Which epithelial peroxide-generating system supplies LPO in each tissue,
and is coupling based on proximity or on diffusible peroxide alone?
- question: >-
Does reversible aggregation modulate LPO persistence or antimicrobial
activity in native human secretions?
suggested_experiments:
- description: >-
Apply isoform-resolved targeted proteomics and N-terminomics to fresh human
saliva, milk, and airway surface liquid to quantify canonical, propeptide-
retaining, and residues-26-108-deleted LPO forms.
hypothesis: >-
LPO processing and isoform abundance differ by secretory tissue, with
canonical mature LPO predominant but measurable incompletely processed forms.
- description: >-
Use CRISPR-edited human salivary- and airway-gland organoids to express each
endogenous LPO splice form separately and measure secretion, heme loading,
thiocyanate turnover, and bacterial killing.
hypothesis: >-
The residues-26-108 deletion changes LPO maturation or stability even if the
secreted protein retains measurable peroxidase activity.
- description: >-
Analyze affinity-purified endogenous human LPO by intact-mass spectrometry,
heme-peptide mapping, and structural spectroscopy.
hypothesis: >-
Endogenous human LPO carries the conserved covalent heme architecture inferred
from recombinant and non-human lactoperoxidases.
- description: >-
Reconstitute human LPO at secretion-matched concentrations while varying pH,
hydrogen-peroxide flux, thiocyanate, iodide, bromide, and urate, and quantify
products by orthogonal chemical assays.
hypothesis: >-
Thiocyanate dominates at basal physiological concentrations, whereas donor
competition and pH shift oxidant partitioning in a tissue-specific manner.
- description: >-
Perturb DUOX enzymes and LPO independently in differentiated human airway and
salivary organoids, then measure extracellular peroxide, HOSCN/OSCN, and
pathogen survival with genetic rescue controls.
hypothesis: >-
Epithelial DUOX activity supplies peroxide required for LPO-dependent
antimicrobial chemistry at mucosal surfaces.
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO terms
findings: []
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: GO reference identity and InterPro-to-GO provenance verified; it supports annotation provenance rather than direct LPO mechanism.
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of
sequence similarity
findings: []
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: GO reference identity and curator-mediated orthology-transfer provenance verified; biological applicability must be assessed at annotation level.
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: GO reference identity and PANTHER phylogenetic-inference provenance verified; it is not primary experimental evidence for human LPO.
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied
by conservative changes to GO terms applied by UniProt
findings: []
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: GO reference identity and UniProt subcellular-location mapping provenance verified; it supports the source route rather than an independent localization experiment.
- id: GO_REF:0000108
title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: GO reference identity and logical-inference provenance verified; this is an automated derivation, not direct LPO evidence.
- id: GO_REF:0000116
title: Automatic Gene Ontology annotation based on Rhea mapping
findings: []
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: GO reference identity and Rhea-reaction mapping provenance verified; reaction specificity still requires LPO biochemical evidence.
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: GO reference identity and combined automated-annotation provenance verified; it does not independently establish human LPO function.
- id: PMID:12626341
title: Lactoperoxidase and human airway host defense.
full_text_unavailable: true
findings:
- statement: Normal human airway secretions contain catalytically active LPO, with LPO expression localized to bronchial submucosal glands.
supporting_text: The data showed that normal human airway secretions contained LPO enzyme activity (0.65 +/- 0.09 microg/mg secreted protein; n = 17), and Western blots of secretions demonstrated bands of the expected sizes for LPO.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: The human airway LPO system uses physiologic thiocyanate and has LPO-dependent antibacterial activity against several airway pathogens.
supporting_text: Finally, as expected based on the known antibacterial spectrum of the LPO system, airway secretions showed LPO-dependent activity against Pseudomonas aeruginosa.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. This is direct human airway evidence, but the cache is abstract-only and does not resolve every component of the epithelial peroxide-generating system.
- id: PMID:19059195
title: Molecular heterogeneity and alternative splicing of human lactoperoxidase.
findings:
- statement: Human LPO produces multiple splice forms that retain the secretion signal while differing in propeptide-encoding exons.
supporting_text: Two mRNAs omit propeptide encoding exons while retaining the 5' exon encoding the secretion signal, consistent with the heterogeneity and suggesting a possible functional role for the propeptide.
reference_section_type: ABSTRACT
- statement: Recombinant human LPO V1 and propeptide-skipping V3 are both secreted and catalytically active in the insect-cell expression system.
supporting_text: Both variants were secreted and were active although V1 was completely processed (see below).
reference_section_type: RESULTS
- statement: Human salivary LPO includes a larger, at least partially unprocessed proLPO form.
supporting_text: These data showed that a significant portion of immunoreactive LPO in secretions contains the exon 4-peptide and thus was at least partially unprocessed, in contrast to the reported N-termini for human LPO from milk determined by Edman degradation [14].
reference_section_type: RESULTS
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Full text, title, human splice products, secretion, activity, and salivary-protein observations verified. The variants were assayed heterologously, and the propeptide's endogenous function remains unresolved.
- id: PMID:19199708
title: Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology
(MudPIT).
findings: []
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: PMID and title verified. This is a broad human parotid-exosome proteomics dataset and supports presence/provenance only; the accessible article text does not provide an LPO-specific mechanism.
- id: PMID:24248522
title: Salivary protein profiles are linked to bitter taste acceptance in infants.
full_text_unavailable: true
findings:
- statement: LPO-containing salivary protein bands were detected in infant saliva and associated with greater bitter-solution acceptance, without establishing a direct LPO mechanism.
supporting_text: while higher abundance of bands containing lactoperoxidase, prolactin-inducible protein and S-type cystatins was associated to a higher bitterness acceptance.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: PubMed title and abstract verified. The finding is an association from mixed-protein bands, not a direct biochemical or causal function of LPO.
- id: PMID:6295491
title: The peroxidation of thiocyanate catalysed by myeloperoxidase and lactoperoxidase.
full_text_unavailable: true
findings:
- statement: LPO catalyzes thiocyanate oxidation to hypothiocyanite with strong dependence on pH and substrate concentrations.
supporting_text: Peroxidation of SCN- to OSCN-, catalysed by myeloperoxidase and lactoperoxidase, was studied.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: Thiocyanate can competitively inhibit LPO with respect to hydrogen peroxide under acidic conditions, bounding simple substrate models.
supporting_text: At low pH values, both SCN- and H+ inhibited myeloperoxidase and lactoperoxidase competitively with respect to H2O2.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. The biochemical enzyme source is not identified in the abstract, so these kinetics should not be represented as direct human-protein evidence.
- id: PMID:8964511
title: Cloning and sequence analysis of the human salivary peroxidase-encoding cDNA.
full_text_unavailable: true
findings:
- statement: A human salivary peroxidase/LPO cDNA encodes an approximately 67-kDa unglycosylated translation product.
supporting_text: In a rabbit reticulocyte lysate transcription/translation system, the cDNA produces a major protein of approx. 67 kDa, which corresponds to the calculated molecular weight of unglycosylated hSPO.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title, human cDNA identity, and in-vitro translation result verified. This establishes product identity/size, not mature glycosylation, secretion, or catalytic activity.
- id: PMID:9083001
title: Autocatalytic processing of heme by lactoperoxidase produces the native protein-bound prosthetic group.
full_text_unavailable: true
findings:
- statement: Hydrogen peroxide drives autocatalytic heme modification and covalent attachment in recombinant LPO.
supporting_text: Reaction of the purified heme. apoLPO complex with H2O2 results in both autocatalytic modification of the heme and covalent attachment to the protein.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: Covalent heme attachment increases LPO peroxidative activity.
supporting_text: The peroxidative activity of LPO increases in proportion to the extent of covalently bound heme.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. The baculovirus/reconstitution system establishes an LPO autocatalytic maturation mechanism, but the abstract does not identify the LPO species and should not be labeled direct endogenous human evidence.
- id: PMID:1988011
title: 'Lactoperoxidase-catalyzed oxidation of thiocyanate by hydrogen peroxide: 15N nuclear magnetic resonance and optical spectral studies.'
full_text_unavailable: true
findings:
- statement: Hypothiocyanite formation is a principal, condition-dependent product of the LPO/thiocyanate/hydrogen-peroxide system.
supporting_text: The formation of hypothiocyanite ion (OSCN-) as one of the oxidation products correlated well with the activity of the LPO/SCN-/H2O2 system and was maximum when the concentrations of the H2O2 and SCN- were nearly the same and the pH was less than 6.0.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: Thiocyanate binding is required for oxidation and is lost at alkaline pH.
supporting_text: Since thiocyanate does not bind to LPO above this pH, the binding of thiocyanate to LPO is considered to be prerequisite for the oxidation of thiocyanate.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. These are direct LPO-system chemistry measurements, but enzyme species is not stated in the abstract.
- id: PMID:6951512
title: Different molecular forms of human salivary lactoperoxidase.
full_text_unavailable: true
findings:
- statement: Human salivary LPO was observed in two molecular forms interpreted as a monomer and a reversible aggregate.
supporting_text: The two different molecular forms shown to exist probably represent a monomer and an aggregate.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: Thiocyanate can promote disaggregation of salivary LPO preparations.
supporting_text: The presence of substrate (SCN-) could cause some disaggregation suggesting that the mechanism of the dissociation is influenced by the substrate.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: PubMed title and abstract verified. This is direct human salivary evidence, but βmonomer and aggregateβ is explicitly probabilistic and should not be converted into an obligate physiological oligomeric state.
- id: PMID:24928513
title: Uric acid and thiocyanate as competing substrates of lactoperoxidase.
full_text_unavailable: true
findings:
- statement: Urate is an alternative bovine-LPO substrate that competes with thiocyanate and suppresses hypothiocyanite production.
supporting_text: At physiologically relevant concentrations, urate competed effectively with thiocyanate, the main substrate of LPO for oxidation, and inhibited production of hypothiocyanite.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: Human saliva supports peroxidase-dependent urate oxidation, providing physiological context without proving that every reaction is LPO-specific.
supporting_text: When hydrogen peroxide was added to saliva, oxidation of urate was dependent on its concentration and peroxidase activity.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: PubMed title and abstract verified. Direct kinetics used bovine LPO; the human-saliva experiment is mixed-system evidence and must not be presented as purified human-LPO specificity.
- id: PMID:18191143
title: Crystal structure of lactoperoxidase at 2.4 A resolution.
full_text_unavailable: true
findings:
- statement: Caprine LPO is a single-chain heme peroxidase with two covalent heme ester linkages.
supporting_text: The structure confirms that the heme group is covalently linked to the protein through two ester linkages involving carboxylic groups of Glu258 and Asp108 and modified methyl groups of pyrrole rings A and C, respectively.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: The LPO distal cavity contains a structured proton-relay path relevant to catalysis.
supporting_text: Two histidine residues and six buried water molecules are connected through a hydrogen-bonded chain from the distal heme cavity to the surface of protein molecule and seemingly form the basis of proton relay for catalytic action.
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. This is caprine structural evidence; conserved human residues support cautious transfer, but species-specific post-translational details are not directly established.
- id: PMID:22187667
title: 'Structural evidence for the order of preference of inorganic substrates in mammalian heme peroxidases: crystal structure of the complex of lactoperoxidase with four inorganic substrates, SCN, I, Br and Cl.'
full_text_unavailable: true
findings:
- statement: LPO binds thiocyanate, iodide, bromide, and chloride at distinct positions on the distal heme side.
supporting_text: The structure determination of the complex of LPO with above four substrates showed that all of them occupied distinct positions in the substrate binding site on the distal heme side.
full_text_unavailable: true
reference_section_type: ABSTRACT
- statement: The crystallographic substrate positions imply a binding preference of bromide over chloride, thiocyanate, and iodide under the structural conditions used.
supporting_text: Therefore, according to the locations of four substrate anions, the order of preference for binding to lactoperoxidase is observed as Br(-) > Cl(-) > SCN(-) > I(-).
full_text_unavailable: true
reference_section_type: ABSTRACT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: PubMed title and abstract verified. This is non-human LPO crystallography and describes binding-site occupancy/preferences, not necessarily physiological product flux in human secretions.
- id: PMID:36463312
title: Excess iodine exposure acutely increases salivary iodide and antimicrobial hypoiodous acid concentrations in humans.
findings:
- statement: Acute iodide loading in humans increases salivary iodide and hypoiodous acid, supporting hypohalous chemistry by the salivary LPO system.
supporting_text: The large iodine load delivered by the angiographic dye, several 100-fold in excess of the U.S. Recommended Daily Allowance for iodine (150Β Β΅g/day), significantly increased salivary iodide and HOI levels compared with baseline levels, whereas there was no significant change in salivary SCN- and OSCN- levels.
reference_section_type: ABSTRACT
reference_review:
relevance: MEDIUM
correctness: VERIFIED
review_notes: Full cached article, PubMed title, and human saliva measurements verified. This is a system-level intervention with supraphysiologic iodide exposure, not purified human-LPO kinetics or evidence that HOI dominates normally.
- id: Reactome:R-HSA-8855490
title: Lactoperoxidase (LPO) produces OSCN-
findings:
- statement: Reactome models human LPO Compound I oxidation of thiocyanate to hypothiocyanite.
supporting_text: The Reactome event describes the halogenation cycle where LPO-derived Compound I catalyzes the oxidation of thiocyanate ion (SCN-) to hypothiocyanite ion (OSCN-).
reference_section_type: OTHER
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Cached human Reactome event and participant narrative verified. This is curated pathway synthesis supported by cited literature, not an independent primary experiment.