MAPK1 (ERK2) is an ATP-dependent, proline-directed serine/threonine MAP kinase in the canonical Ras-RAF-MEK-ERK cascade. It is activated by MEK1/2 dual phosphorylation, phosphorylates cytosolic and nuclear substrates, and shuttles between cytoplasmic/cytosolic and nuclear compartments after stimulation. Distal proliferation, differentiation, apoptosis, migration, transcriptional, and disease phenotypes are context-dependent ERK pathway outputs rather than the core MAPK1 molecular function.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0005634 nucleus | IBA GO_REF:0000033 | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005737 cytoplasm | IBA GO_REF:0000033 | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0035556 intracellular signal transduction | IBA GO_REF:0000033 | ACCEPT | Summary: MAPK1 functions in intracellular signal transduction downstream of extracellular cues. Reason: Intracellular signal transduction is a supported core process for MAPK1 as the ERK2 kinase in the canonical MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0004674 protein serine/threonine kinase activity | IBA GO_REF:0000033 | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0007166 cell surface receptor signaling pathway | IBA GO_REF:0000033 | MODIFY | Summary: MAPK1 responds to cell-surface receptor inputs, but its core role is the downstream intracellular ERK/MAPK cascade. Reason: Cell surface receptor signaling is too broad and upstream-oriented for the MAPK1 core function; ERK/MAPK cascade terms are more specific. Propagation Review Root cause: TERM SCOPING PROBLEM Failure modes: GRANULARITY MISMATCH Sources checked: PANTHER:PTN008603019 · PTN008603019 SUPPORTS SOURCE BUT NOT TARGET The PAINT node's descendant evidence (including human MAPK1/MAPK3 themselves) genuinely supports receptor-initiated signaling, but the term is too broad and upstream-oriented for the core function; the ERK cascade replacement terms carry the same biology at the right granularity. Proposed replacements: ERK1 and ERK2 cascade MAPK cascade Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0004672 protein kinase activity | IEA GO_REF:0000120 | MODIFY | Summary: MAPK1 is a protein kinase, but this term is less specific than the supported serine/threonine MAP kinase terms. Reason: The generic protein kinase term should be replaced by protein serine/threonine kinase activity and MAP kinase activity, which capture MAPK1 specificity. Proposed replacements: protein serine/threonine kinase activity MAP kinase activity Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0004707 MAP kinase activity | IEA GO_REF:0000120 | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0005524 ATP binding | IEA GO_REF:0000002 | ACCEPT | Summary: MAPK1 binds ATP as the phosphoryl donor for kinase catalysis. Reason: ATP binding is integral to the active-site chemistry of ERK2 kinase activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0005634 nucleus | IEA GO_REF:0000120 | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005737 cytoplasm | IEA GO_REF:0000120 | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005769 early endosome | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This early endosome annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the early endosome location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005770 late endosome | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This late endosome annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the late endosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005794 Golgi apparatus | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This Golgi apparatus annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the Golgi apparatus location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005813 centrosome | IEA GO_REF:0000044 | MARK AS OVER ANNOTATED | Summary: This centrosome annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the centrosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005819 spindle | IEA GO_REF:0000044 | MARK AS OVER ANNOTATED | Summary: This spindle annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the spindle location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005901 caveola | IEA GO_REF:0000044 | MARK AS OVER ANNOTATED | Summary: This caveola annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005925 focal adhesion | IEA GO_REF:0000120 | MARK AS OVER ANNOTATED | Summary: This focal adhesion annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the focal adhesion location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0006357 regulation of transcription by RNA polymerase II | IEA GO_REF:0000108 | MARK AS OVER ANNOTATED | Summary: MAPK1 can affect transcriptional programs through downstream substrates, but broad regulation of RNA polymerase II transcription overstates the direct function. Reason: The direct MAPK1 function is kinase activity and ERK/MAPK cascade signaling; broad transcriptional regulation should not be inferred from pathway membership alone. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0007173 epidermal growth factor receptor signaling pathway | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0010759 positive regulation of macrophage chemotaxis | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0032206 positive regulation of telomere maintenance | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: Positive regulation of telomere maintenance is inferred from a high-throughput RNAi telomerase screen (PMID:21531765) plus electronic annotation. Reason: This is a high-throughput screen-derived, indirect pathway outcome rather than a direct MAPK1 function; it should not be elevated to a core ERK2 annotation without direct mechanistic evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0032872 regulation of stress-activated MAPK cascade | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This automated annotation places canonical ERK2 in a stress-activated MAPK cascade context. Reason: GO:0032872 is a stress-activated MAPK cascade term associated with JNK/p38 signaling, whereas MAPK1/ERK2 is curated here as the canonical ERK/MAPK cascade kinase. The automated inference overstates the evidence. |
| GO:0034198 cellular response to amino acid starvation | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is an amino-acid-starvation response annotation linked to ERK signaling context. Reason: The starvation-response annotation may be retained as non-core where the source evidence supports this context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0045202 synapse | IEA GO_REF:0000108 | MARK AS OVER ANNOTATED | Summary: This synapse annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the synapse location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0051403 stress-activated MAPK cascade | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This automated annotation places canonical ERK2 in the stress-activated MAPK cascade. Reason: GO:0051403 refers to stress-activated MAPK cascade biology associated with JNK/p38 signaling, not the canonical ERK1/ERK2 cascade. The automated inference should not be retained as a valid non-core MAPK1 annotation. |
| GO:0051493 regulation of cytoskeleton organization | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of cytoskeleton organization) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0061514 interleukin-34-mediated signaling pathway | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0070371 ERK1 and ERK2 cascade | IEA GO_REF:0000117 | ACCEPT | Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade. Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0070849 response to epidermal growth factor | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0072584 caveolin-mediated endocytosis | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0090170 regulation of Golgi inheritance | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of Golgi inheritance) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0097542 ciliary tip | IEA GO_REF:0000117 | MARK AS OVER ANNOTATED | Summary: This ciliary tip annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the ciliary tip location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0106310 protein serine kinase activity | IEA GO_REF:0000116 | MODIFY | Summary: MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete for ERK2. Reason: ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707 better capture the supported activity than a serine-only activity term. Proposed replacements: protein serine/threonine kinase activity MAP kinase activity Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0120041 positive regulation of macrophage proliferation | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:2000641 regulation of early endosome to late endosome transport | IEA GO_REF:0000117 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of early endosome to late endosome transport) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0005515 protein binding | IPI PMID:10415025 Direct suppression of TCR-mediated activation of extracellul... | MODIFY | Summary: ERK2 forms a complex with the tyrosine phosphatase LC-PTP/HePTP (PTPN7; WITH/FROM P35236), which dephosphorylates and inactivates it via a KIM-dependent interaction. Reason: The cited study shows direct complex formation between ERK2 and the phosphatase HePTP/LC-PTP; 'protein phosphatase binding' is the informative MF for this interaction. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:10415025 LC-PTP and LC-PTPCS made complexes with ERK1, ERK2, and p38alpha file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. PMID:23047924 Mitogen-activated protein kinases (MAPKs) have a docking groove that interacts with linear "docking" motifs in binding partners. PMID:23047924 Crystal structures of four complexes of MAPKs with docking peptides ... revealed that the regions located between consensus positions in the docking motifs showed conformational diversity. |
| GO:0005515 protein binding | IPI PMID:10601328 A novel regulatory mechanism of MAP kinases activation and n... | MODIFY | Summary: ERK2 binds the KIM of the receptor-type tyrosine phosphatase PTP-SL (PTPRR; WITH/FROM Q15256), which retains it in the cytoplasm and dephosphorylates it. Reason: The paper directly characterises KIM-mediated association of ERK1/2 with the phosphatase PTP-SL; replace bare protein binding with 'protein phosphatase binding'. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:10601328 Protein tyrosine phosphatase PTP-SL retains mitogen-activated protein (MAP) kinases in the cytoplasm in an inactive form by association through a kinase interaction motif (KIM) and tyrosine dephosphorylation. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:12592337 The protein tyrosine phosphatase HePTP regulates nuclear tra... | MODIFY | Summary: Interaction of ERK2 with the tyrosine phosphatase HePTP (PTPN7; WITH/FROM P35236), which regulates ERK2 nuclear translocation. Reason: The partner is the ERK-directed tyrosine phosphatase HePTP; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:12592337 The tyrosine phosphatase HePTP was recently demonstrated to regulate ERK activity file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:12840032 Constitutive induction of p-Erk1/2 accompanied by reduced ac... | MODIFY | Summary: Interaction of ERK2 with MKP3/DUSP6 (WITH/FROM Q16828), an ERK-directed dual-specificity phosphatase. Reason: The partner is the MAP kinase phosphatase MKP3/DUSP6, which dephosphorylates p-ERK1/2 in this study; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:12840032 p-Erk1/2 proteins were efficiently dephosphorylated in vitro by protein phosphatases 1 and 2A (PP1/2A) and MAPK phosphatase 3 (MKP3). file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:15713638 Specific inactivation and nuclear anchoring of extracellular... | MODIFY | Summary: ERK2 binds the KIM of the nuclear dual-specificity phosphatase DUSP5 (WITH/FROM Q16690), which inactivates and anchors ERK2 in the nucleus. Reason: Direct KIM-dependent binding of ERK2 to the phosphatase DUSP5 is demonstrated; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:15713638 DUSP5, an inducible nuclear phosphatase, interacts specifically with ERK2 via a kinase interaction motif (KIM) within its amino-terminal noncatalytic domain file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:16038800 Conditional expression of MAP kinase phosphatase-2 protects ... | MODIFY | Summary: ERK co-precipitates with MAP kinase phosphatase-2 (MKP-2/DUSP4; WITH/FROM Q13115). Reason: The partner is the dual-specificity phosphatase MKP-2/DUSP4; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:16038800 phosphorylated forms of each kinase are co-precipitated with both WT and CI-MKP-2 file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:16286470 Cooperation of ERK and SCFSkp2 for MKP-1 destruction provide... | MODIFY | Summary: Active ERK2 docks onto the DEF motif of MKP-1/DUSP1 (WITH/FROM P28562) and phosphorylates it, promoting its SCF(Skp2)-dependent degradation. Reason: The interaction is ERK2 docking to the phosphatase MKP-1/DUSP1; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:16286470 Active ERK2 docking to the DEF motif (FXFP, residues 339-342) of N-terminally truncated MKP-1 in vitro initiated phosphorylation at the Ser(296)/Ser(323) domain file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:16288922 New insights into the catalytic activation of the MAPK phosp... | MODIFY | Summary: ERK2 binds the N-terminal domain of the MAPK phosphatase PAC-1/DUSP2 (WITH/FROM Q05922), catalytically activating the phosphatase. Reason: Direct binding of ERK2 to the phosphatase PAC-1/DUSP2 is shown; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:16288922 ERK2 dephosphorylation by PAC-1 requires association of its amino-terminal domain with ERK2 that results in catalytic activation of the phosphatase. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:17255944 A MAPK docking site is critical for downregulation of Capicu... | MODIFY | Summary: Interaction with the Capicua transcriptional repressor (WITH/FROM Q9U1H0) through a MAPK docking site in Capicua. Reason: The partner is the HMG-box transcriptional repressor Capicua, bound through its MAPK docking site; 'DNA-binding transcription factor binding' is more informative than bare protein binding. The abstract describes the interaction with Drosophila Rolled; the curator's assignment to human ERK2 presumably reflects assays in the full text, which is deferred to. Proposed replacements: DNA-binding transcription factor binding Supporting Evidence: PMID:17255944 depend on a MAPK docking site in Capicua that physically interacts with the MAPK Rolled file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:17255949 Mxi2 promotes stimulus-independent ERK nuclear translocation... | MODIFY | Summary: ERK1/2 bind Mxi2, a p38alpha (MAPK14) isoform (WITH/FROM Q16539-3; also MEK1 and PEA-15 listed), which promotes stimulus-independent ERK nuclear import. Reason: The principal partner studied is the p38alpha kinase isoform Mxi2 (MEK1 also listed); 'protein kinase binding' is the informative MF. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q02750 (Dual specificity mitogen-activated protein kinase kinase 1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: PMID:17255949 Mxi2 is a p38alpha isoform with the ability to bind ERK1/2. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:18060821 Structural insights into the enzymatic mechanism of the path... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18060821; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:18084305 Structural basis for the catalytic mechanism of phosphothreo... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18084305; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:18463290 Human biliverdin reductase is an ERK activator; hBVR is an E... | MODIFY | Summary: ERK1/2 bind human biliverdin reductase (BLVRA; WITH/FROM P53004), a dual-function reductase/Ser-Thr-Tyr kinase, via C- and D-box MAPK docking motifs; hBVR activates ERK and serves as an ERK nuclear transporter. Reason: The partner hBVR is described as a Ser/Thr/Tyr kinase that docks onto ERK; 'protein kinase binding' is the informative MF. Proposed replacements: protein kinase binding Supporting Evidence: PMID:18463290 Human biliverdin reductase (hBVR) is a recently described Ser/Thr/Tyr kinase in the MAPK insulin/insulin-like growth factor 1 (IGF1)-signaling cascade. PMID:18463290 are ERK interactive sites; interaction at each site is critical for ERK/Elk1 activation file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:18616943 Phosphorylation of U24 from Human Herpes Virus type 6 (HHV-6... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18616943; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:19494114 Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhi... | MODIFY | Summary: ERK1/2 are direct substrates of, and bind, the receptor tyrosine phosphatase DEP-1/PTPRJ (WITH/FROM Q12913). Reason: Pulldown and dephosphorylation assays show ERK binds the phosphatase DEP-1; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:19494114 the ERK1/2, is indeed a direct DEP-1 substrate in vivo file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:21826244 TRAPPC4-ERK2 interaction activates ERK1/2, modulates its nuc... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:21826244; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:21908610 Phosphorylation of the kinase interaction motif in mitogen-a... | MODIFY | Summary: ERK1/2 bind the kinase interaction motif of MKP-4/DUSP9 (WITH/FROM Q99956), which mediates their inactivation. Reason: KIM-dependent binding of ERK to the phosphatase DUSP9 is shown; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:21908610 Here we demonstrate that inactivation of both ERK1/2 and p38α by DUSP9/MKP-4 is mediated by a conserved arginine-rich kinase interaction motif located within the amino-terminal non-catalytic domain of the protein. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:21988832 Toward an understanding of the protein interaction network o... | MODIFY | Summary: High-throughput yeast two-hybrid interaction between ERK2 and RSK2/RPS6KA3 (WITH/FROM P51812) in the human liver interactome. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:22521293 ETS-dependent p16INK4a and p21waf1/cip1 gene expression upon... | MODIFY | Summary: ERK2 forms a complex with ETS1 and with Mxi2, the p38alpha (MAPK14) isoform (WITH/FROM Q16539-3), in renal proximal tubule cells. Reason: The GOA partner is the p38alpha kinase isoform Mxi2; 'protein kinase binding' is the informative MF. Proposed replacements: protein kinase binding Supporting Evidence: PMID:22521293 A further complex partner was Mxi2. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23241949 MEK1 inactivates Myt1 to regulate Golgi membrane fragmentati... | MODIFY | Summary: Interaction of ERK with its upstream activating kinase MEK1/MAP2K1 (WITH/FROM Q02750) in a study of MEK1-dependent Golgi fragmentation. Reason: The partner is the MAP kinase kinase MEK1; 'mitogen-activated protein kinase kinase binding' is the specific informative MF. Proposed replacements: mitogen-activated protein kinase kinase binding Supporting Evidence: PMID:23241949 MEK1 is required for Golgi fragmentation in G2 and for the entry of cells into mitosis. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23455922 Interlaboratory reproducibility of large-scale human protein... | MODIFY | Summary: AP-MS interaction between ERK2 and RSK1/RPS6KA1 (WITH/FROM Q15418) in a standardized kinase interactome study. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/RSK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. Proposed replacements: protein kinase binding Supporting Evidence: PMID:23455922 interactomes of 32 human kinases file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23519423 Protein-peptide complex crystallization: a case study on the... | MODIFY | Summary: Crystal structures of ERK2 bound to docking peptides, including the reverse D-motif of RSK1/RPS6KA1 (WITH/FROM Q15418). Reason: The partner is the D-motif of the downstream kinase RSK1 bound to the ERK2 docking groove; 'protein kinase binding' is the informative MF. Proposed replacements: protein kinase binding Supporting Evidence: PMID:23519423 PepRSK1 contains a reverse D-motif from a downstream MAP kinase-activated protein kinase (MAPKAP) that is a known ERK2 substrate file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23560844 Metal-dependent protein phosphatase 1A functions as an extra... | MODIFY | Summary: ERK is directly dephosphorylated by, and bound by, the metal-dependent phosphatase PPM1A (WITH/FROM P35813). Reason: The partner is the Ser/Thr phosphatase PPM1A acting on ERK; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:23560844 PPM1A negatively regulated ERK by directly dephosphorylating its pThr202 position early in EGF stimulation file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23575685 Structure of ERK2 bound to PEA-15 reveals a mechanism for ra... | MODIFY | Summary: Crystal structures of ERK2 bound to the scaffolding protein PEA-15 (WITH/FROM Q15121), which occupies two ERK2 docking sites. Reason: PEA-15 is explicitly described as a scaffolding protein that directly binds ERK1/2; 'scaffold protein binding' is the informative MF. Proposed replacements: scaffold protein binding Supporting Evidence: PMID:23575685 The scaffolding protein PEA-15 is a death effector domain protein that directly interacts with ERK1/2 file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23584453 Interaction with Shc prevents aberrant Erk activation in the... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23584453; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:23602568 The protein interaction landscape of the human CMGC kinase g... | MODIFY | Summary: AP-MS interaction of ERK2 with RSK2/RPS6KA3 and RSK3/RPS6KA2 (WITH/FROM P51812, Q15349) in the CMGC kinase interaction landscape. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2, RPS6KA2/RSK3). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:25241761 Using an in situ proximity ligation assay to systematically ... | MODIFY | Summary: Endogenous in situ proximity ligation detection of ERK2 with RSK2/RPS6KA3 and the phosphatases HePTP/PTPN7 and PTP-SL/PTPRR (WITH/FROM P51812, P35236, Q15256). Reason: The partners are a protein kinase (RSK2) and ERK-directed tyrosine phosphatases (HePTP, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P35236 (Tyrosine-protein phosphatase non-receptor type 7), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:25852190 Integrative analysis of kinase networks in TRAIL-induced apo... | MODIFY | Summary: Interaction of ERK2 with RSK3/RPS6KA2 (WITH/FROM Q15349) in a kinase interaction network analysis. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA2/RSK3). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:26267535 ERK2-Dependent Phosphorylation of CSN6 Is Critical in Colore... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:26267535; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:26733474 Identification of allosteric ERK2 inhibitors through in sili... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:26733474; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:27880917 Phenotypic and Interaction Profiling of the Human Phosphatas... | MODIFY | Summary: Interaction of ERK2 with the MAPK phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM Q13115, Q16828, Q99956) in systematic phosphatase interaction profiling. Reason: All partners are ERK-directed dual-specificity phosphatases; 'protein phosphatase binding' is the informative MF. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q13115 (Dual specificity protein phosphatase 4), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:29997244 LuTHy: a double-readout bioluminescence-based two-hybrid tec... | MODIFY | Summary: LuTHy two-hybrid interaction between ERK2 and RSK1/RPS6KA1 (WITH/FROM Q15418). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/RSK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32296183; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32707033 Kinase Interaction Network Expands Functional and Disease Ro... | MODIFY | Summary: Kinase interaction network interactions of ERK2 with RSK2, RSK3 and MNK1 (WITH/FROM P51812, Q15349, Q9BUB5). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2, RPS6KA2/RSK3, MKNK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32814053; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:33961781; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:34591642 A protein network map of head and neck cancer reveals PIK3CA... | MODIFY | Summary: AP-MS interactions of ERK2 with RSK1, RSK2 and RSK3 (WITH/FROM Q15418, P51812, Q15349) in a head and neck cancer protein network. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/2/3 (RSK1-3)). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:35271311 OpenCell: Endogenous tagging for the cartography of human ce... | MODIFY | Summary: OpenCell endogenous-tagging interaction between ERK2 and RSK3/RPS6KA2 (WITH/FROM Q15349). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA2/RSK3). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:38884001 Mapping adipocyte interactome networks by HaloTag-enrichment... | MODIFY | Summary: HaloTag-enrichment mass spectrometry interaction between ERK2 and STAT3 (WITH/FROM P40763) in adipocytes. Reason: The partner STAT3 is a DNA-binding transcription factor and a known ERK phosphorylation target; 'DNA-binding transcription factor binding' is more informative than bare protein binding. The partner identity is taken from the GOA WITH/FROM field of this high-throughput study. Proposed replacements: DNA-binding transcription factor binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:40205054 Multimodal cell maps as a foundation for structural and func... | MODIFY | Summary: Multimodal cell map interaction between ERK2 and the scaffold protein PEA-15 (WITH/FROM Q15121). Reason: The partner PEA-15 is a well-characterised ERK scaffolding/anchoring protein (see PMID:23575685); 'scaffold protein binding' is the informative MF. Proposed replacements: scaffold protein binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:9632734 Activation of extracellular signal-regulated kinase 2 by a n... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:9632734; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:9788880 Isolation of the human genes encoding the pyst1 and Pyst2 ph... | MODIFY | Summary: ERK2 is a preferred substrate of, and binds, the cytosolic dual-specificity MAP kinase phosphatase Pyst2/MKP-X (DUSP7; WITH/FROM Q16829), which it catalytically activates. Reason: The partner is the ERK-selective phosphatase DUSP7; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:9788880 Pyst2 shows substrate selectivity for the classical p42 (ERK2) isoform of MAP kinase both in vitro and in vivo file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0042802 identical protein binding | IPI PMID:16627622 Direct phosphorylation and regulation of poly(ADP-ribose) po... | KEEP AS NON CORE | Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by PMID:16627622. Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function. |
| GO:0042802 identical protein binding | IPI PMID:26267534 Small Molecule Inhibition of ERK Dimerization Prevents Tumor... | KEEP AS NON CORE | Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by PMID:26267534. Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function. |
| GO:0001784 phosphotyrosine residue binding | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This term assigns phosphotyrosine residue binding to ERK2. Reason: ERK2 substrate and partner recognition is mediated by D-domain/KIM and DEF/FXFP docking motifs rather than by a dedicated phosphotyrosine-binding module; this automated assignment is not supported as a core ERK2 molecular function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0004674 protein serine/threonine kinase activity | IEA GO_REF:0000107 | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0005739 mitochondrion | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Ensembl ortholog projection of mitochondrion from mouse Mapk1; a minor, stimulus-dependent ERK2 pool at mitochondria is supported by primary studies. Reason: ORGANELLES check (2026-11-03), previously MARK_AS_OVER_ANNOTATED. The projection source is mouse Mapk1 (P63085), whose mitochondrion row in QuickGO is an MGI IDA on PMID:11884367 (ERKs co-localised with cardiac mitochondria by immunoblotting and immunofluorescence; abstract-only, so the fraction's ER control cannot be checked), so the projection is not circular. Independent primary studies agree that a minor ERK pool enters or associates with mitochondria: in mouse LP07 tumour cells, mitochondrial subfractionation placed ERK1/2 with MEK1/2 in the outer-membrane and intermembrane-space fractions, and an ERK2 Cys214 mutant that cannot bind MEK1/2 was retained in mitochondria (PMID:18545666); ERK1/2 were found active in the outer membrane/intermembrane space fraction of rat brain mitochondria (PMID:15030409, abstract-only); and in HeLa cells the paralog ERK1 was shown in purified mitochondria checked for ER contamination by 5'-nucleotidase and glucose-6-phosphatase (PMID:19847302). The organelle claim therefore holds as a minor, stimulus-dependent signalling pool, which is non-core next to the cytoplasmic and nuclear ERK2 pools; the earlier MARK_AS_OVER_ANNOTATED read the term as a core-location claim. Stays at the root: ERK2 has no transit peptide or membrane anchor, the pool is transient trafficking rather than residence (TRAF3/BRAF precedent), and the sub-mitochondrial data split between outer membrane and IMS (with only antibodies that do not separate ERK1 from ERK2), so no sub-compartment row is added. Supporting Evidence: PMID:11884367 MAPK co-localized with cardiac mitochondria PMID:18545666 caused ERK2 retention in mitochondria PMID:18545666 mitochondrial subfractionation showed that MAPKs colocalized with their cognates MEK1/2, MKK3 and MKK4 in the mitochondrial outer membrane and in the intermembrane space PMID:18545666 LP07 cell line was derived from P07 lung tumor spontaneously arisen in a BALB/c mouse PMID:15030409 outer membrane/intermembrane space fraction PMID:19847302 we demonstrated the presence of endogenous and recombinant hERK1 in purified non-contaminated mitochondria of HeLa cells PMID:19847302 5′ nucleotidase and glucose-6-phosphatase were determined in mitochondria from HeLa cells |
| GO:0005829 cytosol | IEA GO_REF:0000107 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment. Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0008286 insulin receptor signaling pathway | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2. Reason: ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function and this ISS/IEA assignment overstates substrate specificity. The supported catalytic terms are MAP kinase activity and protein serine/threonine kinase activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0014044 Schwann cell development | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0016301 kinase activity | IEA GO_REF:0000107 | MODIFY | Summary: MAPK1 is a kinase, but this term is too broad for ERK2. Reason: The broad kinase activity annotation should use the more informative serine/threonine MAP kinase terms. Proposed replacements: protein serine/threonine kinase activity MAP kinase activity Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0019902 phosphatase binding | IEA GO_REF:0000120 | KEEP AS NON CORE | Summary: MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3. Reason: Phosphatase binding is a supported regulatory interaction, but it is not the primary catalytic function of MAPK1. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or KIM abolishes cytoplasmic anchoring. |
| GO:0031143 pseudopodium | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This pseudopodium annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the pseudopodium location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0035094 response to nicotine | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (response to nicotine) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0038133 ERBB2-ERBB3 signaling pathway | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0042552 myelination | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0042802 identical protein binding | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by GO_REF:0000107. Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function. |
| GO:0043415 positive regulation of skeletal muscle tissue regeneration | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0048009 insulin-like growth factor receptor signaling pathway | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0150078 positive regulation of neuroinflammatory response | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0004707 MAP kinase activity | ISS GO_REF:0000024 | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0005829 cytosol | IDA PMID:22451653 Siglec-15 protein regulates formation of functional osteocla... | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment. Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0043415 positive regulation of skeletal muscle tissue regeneration | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0106310 protein serine kinase activity | ISS GO_REF:0000024 | MODIFY | Summary: MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete for ERK2. Reason: ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707 better capture the supported activity than a serine-only activity term. Proposed replacements: protein serine/threonine kinase activity MAP kinase activity Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:35831023 ERK2 MAP kinase regulates SUFU binding by multisite phosphor... | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0045880 positive regulation of smoothened signaling pathway | IDA PMID:35831023 ERK2 MAP kinase regulates SUFU binding by multisite phosphor... | KEEP AS NON CORE | Summary: ERK2 phosphorylation of GLI1 links MAPK1 to Smoothened/Hedgehog pathway output in this specific context. Reason: This is a supported pathway-specific downstream role from PMID:35831023, but the core MAPK1 function remains ERK2 serine/threonine MAP kinase activity in the ERK/MAPK cascade. |
| GO:0005654 nucleoplasm | IDA GO_REF:0000052 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005829 cytosol | IDA GO_REF:0000052 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment. Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0004707 MAP kinase activity | TAS Reactome:R-HSA-111898 | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0004707 MAP kinase activity | TAS Reactome:R-HSA-445079 | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0070371 ERK1 and ERK2 cascade | IDA PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... | ACCEPT | Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade. Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0150078 positive regulation of neuroinflammatory response | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function. Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0004707 MAP kinase activity | IDA PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0070098 chemokine-mediated signaling pathway | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (chemokine-mediated signaling pathway) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0000165 MAPK cascade | IDA PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... | ACCEPT | Summary: MAPK1/ERK2 functions in the canonical MAPK cascade. Reason: MAPK cascade membership is a core biological process for ERK2, downstream of Ras-RAF-MEK signaling. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0061514 interleukin-34-mediated signaling pathway | IGI PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0000165 MAPK cascade | IDA PMID:24854121 Endophilin-1 regulates blood-brain barrier permeability by c... | ACCEPT | Summary: MAPK1/ERK2 functions in the canonical MAPK cascade. Reason: MAPK cascade membership is a core biological process for ERK2, downstream of Ras-RAF-MEK signaling. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0007173 epidermal growth factor receptor signaling pathway | IDA PMID:24854121 Endophilin-1 regulates blood-brain barrier permeability by c... | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0005515 protein binding | IPI PMID:26942675 Mitochondria-Translocated PGK1 Functions as a Protein Kinase... | MODIFY | Summary: ERK1/2 bind and phosphorylate PGK1 (WITH/FROM P00558) at S203, promoting its mitochondrial translocation where PGK1 acts as a protein kinase. Reason: The partner PGK1 is shown in this paper to function as a protein kinase (phosphorylating PDHK1); 'protein kinase binding' is more informative than bare protein binding. Proposed replacements: protein kinase binding Supporting Evidence: PMID:26942675 Mitochondria-Translocated PGK1 Functions as a Protein Kinase to Coordinate Glycolysis and the TCA Cycle in Tumorigenesis. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0032206 positive regulation of telomere maintenance | IMP PMID:21531765 High-throughput RNAi screening reveals novel regulators of t... | MARK AS OVER ANNOTATED | Summary: Positive regulation of telomere maintenance is inferred from a high-throughput RNAi telomerase screen (PMID:21531765) plus electronic annotation. Reason: This is a high-throughput screen-derived, indirect pathway outcome rather than a direct MAPK1 function; it should not be elevated to a core ERK2 annotation without direct mechanistic evidence. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0045542 positive regulation of cholesterol biosynthetic process | IDA PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. | KEEP AS NON CORE | Summary: Positive regulation of cholesterol biosynthesis is an ERK2-linked downstream metabolic outcome reported in PMID:38503280. Reason: This is a context-dependent downstream metabolic process mediated via ERK signaling rather than a core conserved MAPK1 molecular function; retained as non-core. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0005515 protein binding | IPI PMID:11489891 MKP-7, a novel mitogen-activated protein kinase phosphatase,... | MODIFY | Summary: Interaction of ERK2 with the MAPK phosphatase MKP-7/DUSP16 (WITH/FROM Q9BY84). Reason: The partner is the dual-specificity MAP kinase phosphatase MKP-7/DUSP16; 'protein phosphatase binding' is the informative MF. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:11489891 we have identified a novel MKP, designated MKP-7 file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... | MODIFY | Summary: RASopathy-associated MAPK1 variants alter ERK2 interaction with MEK1 (WITH/FROM Q02750) and MKP3/DUSP6 (WITH/FROM Q16828). Reason: The partners are the upstream MAP kinase kinase MEK1 and the ERK phosphatase MKP3/DUSP6; 'mitogen-activated protein kinase kinase binding' and 'protein phosphatase binding' are the informative MFs. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q02750 (Dual specificity mitogen-activated protein kinase kinase 1), so only the mitogen-activated protein kinase kinase binding replacement applies to it. Proposed replacements: mitogen-activated protein kinase kinase binding Supporting Evidence: PMID:32721402 differentially impacting the ability of the altered proteins to interact with MEK1, MKP3, and substrates file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005634 nucleus | IDA PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005737 cytoplasm | IDA PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005515 protein binding | IPI PMID:32051553 The EGFR-ZNF263 signaling axis silences SIX3 in glioblastoma... | MODIFY | Summary: Activated ERK2 binds the zinc-finger transcriptional repressor ZNF263 (WITH/FROM O14978) through a D-domain, promoting SIX3 silencing in glioblastoma. Reason: ZNF263 is a DNA-binding transcriptional repressor (binds the SIX3 promoter) that docks onto ERK2; 'DNA-binding transcription factor binding' is the informative MF. Proposed replacements: DNA-binding transcription factor binding Supporting Evidence: PMID:32051553 Activated ERK2 interacts directly with ZNF263 through the ERK D-domain PMID:32051553 ZNF263 binds to SIX3 promoter and acts as a transcriptional repressor of SIX3 file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:7588608 ERF: an ETS domain protein with strong transcriptional repre... | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0010759 positive regulation of macrophage chemotaxis | IGI PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0120041 positive regulation of macrophage proliferation | IGI PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0005515 protein binding | IPI PMID:15133037 The major vault protein is a novel substrate for the tyrosin... | MODIFY | Summary: Activated ERKs interact with the major vault protein (MVP; WITH/FROM Q14764), described as a scaffold protein in EGF signaling that also complexes with SHP-2. Reason: The partner MVP is described as a scaffold protein for EGF/ERK signaling; 'scaffold protein binding' is the informative MF. Proposed replacements: scaffold protein binding Supporting Evidence: PMID:15133037 MVP also interacts with the activated form of the extracellular-regulated kinases (Erks) in response to EGF file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9652816 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005788 endoplasmic reticulum lumen | TAS Reactome:R-HSA-9636296 | MARK AS OVER ANNOTATED | Summary: This is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9635739 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:26996940 Regulation of Microtubule Assembly by Tau and not by Pin1. | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0005886 plasma membrane | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This plasma membrane annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the plasma membrane location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005901 caveola | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This caveola annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0007611 learning or memory | NAS PMID:11404397 Beta-amyloid activates the mitogen-activated protein kinase ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0035094 response to nicotine | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (response to nicotine) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0034198 cellular response to amino acid starvation | IDA PMID:11096076 Glutamine-dependent antiapoptotic interaction of human gluta... | KEEP AS NON CORE | Summary: This is an amino-acid-starvation response annotation linked to ERK signaling context. Reason: The starvation-response annotation may be retained as non-core where the source evidence supports this context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0051403 stress-activated MAPK cascade | IDA PMID:11096076 Glutamine-dependent antiapoptotic interaction of human gluta... | MARK AS OVER ANNOTATED | Summary: This stress-activated MAPK cascade annotation on MAPK1/ERK2 derives from a paper focused on ASK1/JNK stress signaling, not the canonical ERK cascade. Reason: GO:0051403 (stress-activated MAPK cascade) is associated with JNK/p38 (SAPK) signaling. PMID:11096076 concerns the Gln-dependent interaction of glutaminyl-tRNA synthetase with apoptosis signal-regulating kinase 1 (ASK1) and JNK/SAPK, not ERK2; assigning the stress-activated MAPK cascade to canonical ERK2 over-annotates MAPK1. Supporting Evidence: PMID:11096076 signal-regulating kinase 1 (ASK1) and c-Jun N-terminal kinase (JNK; also known as stress-activated protein kinase (SAPK)) in Gln-deprived cells |
| GO:0005576 extracellular region | TAS Reactome:R-HSA-6798751 | MARK AS OVER ANNOTATED | Summary: This is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005576 extracellular region | TAS Reactome:R-HSA-6800434 | MARK AS OVER ANNOTATED | Summary: This is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0035578 azurophil granule lumen | TAS Reactome:R-HSA-6798751 | MARK AS OVER ANNOTATED | Summary: This is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:1904813 ficolin-1-rich granule lumen | TAS Reactome:R-HSA-6800434 | MARK AS OVER ANNOTATED | Summary: This is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005515 protein binding | IPI PMID:24735981 MFAP3L activation promotes colorectal cancer cell invasion a... | MODIFY | Summary: ERK2 interacts with MFAP3L (WITH/FROM O75121), reported as a nuclear protein kinase that phosphorylates ERK2 downstream of nuclear EGFR. Reason: The partner MFAP3L is reported in this paper to act as a protein kinase that phosphorylates ERK2; 'protein kinase binding' is the informative MF. Proposed replacements: protein kinase binding Supporting Evidence: PMID:24735981 acted as a protein kinase PMID:24735981 the activated form of MFAP3L phosphorylated ERK2 at Thr185 and Tyr187 file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0006468 protein phosphorylation | IDA PMID:23184662 Phosphorylation of eukaryotic elongation factor 2 (eEF2) by ... | ACCEPT | Summary: MAPK1 directly phosphorylates protein substrates. Reason: Protein phosphorylation is the direct biochemical output of the MAPK1 kinase activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family and other transcription-factor substrates in vitro and in cells; docking motifs/exosites help determine substrate recognition. |
| GO:0005634 nucleus | HDA PMID:16791210 Dynamic proteomics in individual human cells uncovers widesp... | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005737 cytoplasm | HDA PMID:16791210 Dynamic proteomics in individual human cells uncovers widesp... | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005737 cytoplasm | ISS GO_REF:0000024 | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0072686 mitotic spindle | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This mitotic spindle annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the mitotic spindle location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005515 protein binding | IPI PMID:23847209 Pseudophosphatase STYX modulates cell-fate decisions and cel... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23847209; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-198746 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-198756 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-199959 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-203797 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-3132737 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-3857329 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-450325 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-5674387 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-5675373 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-9032751 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-9610166 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-9632910 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-9725030 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-HSA-9765960 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005654 nucleoplasm | TAS Reactome:R-NUL-9009236 | ACCEPT | Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm. Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-109858 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-109862 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-109864 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-111898 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-1168459 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-2029469 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-3371531 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-418158 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-418163 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-418170 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-418176 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-418200 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-445079 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5654560 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5654562 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5654565 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5654566 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5672972 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5672973 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5672978 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5672980 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674130 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674132 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674366 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674373 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674385 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674387 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5674496 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5675194 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5675198 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5675206 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-5675376 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802910 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802911 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802912 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802914 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802918 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802919 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802921 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802922 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802925 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802926 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802932 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802933 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802934 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802935 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802942 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6802943 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6803227 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6803230 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6803233 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6803234 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6811454 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-6811472 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9610152 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9610153 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9610154 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9610156 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9610166 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9626832 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9627089 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9632910 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9635743 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9636296 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9652165 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9656209 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9656211 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9656214 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9656215 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9657599 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9657603 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9657606 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9657608 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9731111 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9732753 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9734547 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9824582 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9824977 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9825759 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-HSA-9845033 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005829 cytosol | TAS Reactome:R-NUL-9619973 | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol. Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0038127 ERBB signaling pathway | IDA PMID:15133037 The major vault protein is a novel substrate for the tyrosin... | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0005515 protein binding | IPI PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18794356; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005634 nucleus | IDA PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005737 cytoplasm | IDA PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... | ACCEPT | Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells. Reason: Cytoplasmic localization is a core supported localization for ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0070849 response to epidermal growth factor | IDA PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... | KEEP AS NON CORE | Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function. Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0005515 protein binding | IPI PMID:22253824 Localization of nucleoporin Tpr to the nuclear pore complex ... | REMOVE | Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:22253824; ERK2 has many reported interacting partners. Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and should not be retained as a bare GO:0005515 assertion. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP), and specific docking, substrate, scaffold, or phosphatase interactions should be curated with a more informative molecular-function term where the evidence supports one. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0004674 protein serine/threonine kinase activity | IDA PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... | ACCEPT | Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase. Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0005634 nucleus | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | ACCEPT | Summary: MAPK1/ERK2 localizes to the nucleus after stimulation. Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. file:human/MAPK1/MAPK1-deep-research-falcon.md **Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors. |
| GO:0005739 mitochondrion | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | KEEP AS NON CORE | Summary: Mitochondrion (TAS) from the Yao and Seger review of ERK-cascade compartments; a minor, stimulus-dependent ERK2 pool at mitochondria is supported by primary studies. Reason: ORGANELLES check (2026-11-03), previously MARK_AS_OVER_ANNOTATED. The TAS source PMID:19565474 is a review whose cached text is abstract-only and does not name the mitochondrion, so the row is judged on primary papers. Independent primary studies agree that a minor ERK pool enters or associates with mitochondria: in mouse LP07 tumour cells, mitochondrial subfractionation placed ERK1/2 with MEK1/2 in the outer-membrane and intermembrane-space fractions, and an ERK2 Cys214 mutant that cannot bind MEK1/2 was retained in mitochondria (PMID:18545666); ERK1/2 were found active in the outer membrane/intermembrane space fraction of rat brain mitochondria (PMID:15030409, abstract-only); and in HeLa cells the paralog ERK1 was shown in purified mitochondria checked for ER contamination by 5'-nucleotidase and glucose-6-phosphatase (PMID:19847302). The organelle claim therefore holds as a minor, stimulus-dependent signalling pool, which is non-core next to the cytoplasmic and nuclear ERK2 pools; the earlier MARK_AS_OVER_ANNOTATED read the term as a core-location claim. Stays at the root: ERK2 has no transit peptide or membrane anchor, the pool is transient trafficking rather than residence (TRAF3/BRAF precedent), and the sub-mitochondrial data split between outer membrane and IMS (with only antibodies that do not separate ERK1 from ERK2), so no sub-compartment row is added. Supporting Evidence: PMID:18545666 caused ERK2 retention in mitochondria PMID:18545666 mitochondrial subfractionation showed that MAPKs colocalized with their cognates MEK1/2, MKK3 and MKK4 in the mitochondrial outer membrane and in the intermembrane space PMID:18545666 LP07 cell line was derived from P07 lung tumor spontaneously arisen in a BALB/c mouse PMID:15030409 outer membrane/intermembrane space fraction PMID:19847302 we demonstrated the presence of endogenous and recombinant hERK1 in purified non-contaminated mitochondria of HeLa cells PMID:19847302 5′ nucleotidase and glucose-6-phosphatase were determined in mitochondria from HeLa cells |
| GO:0005769 early endosome | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This early endosome annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the early endosome location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005770 late endosome | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This late endosome annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the late endosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005794 Golgi apparatus | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This Golgi apparatus annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the Golgi apparatus location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005829 cytosol | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | ACCEPT | Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment. Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. |
| GO:0005856 cytoskeleton | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This cytoskeleton annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the cytoskeleton location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005901 caveola | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This caveola annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0005925 focal adhesion | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This focal adhesion annotation is not a supported core MAPK1 localization in this review. Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the focal adhesion location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| GO:0032872 regulation of stress-activated MAPK cascade | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | MARK AS OVER ANNOTATED | Summary: This TAS annotation assigns regulation of the stress-activated MAPK cascade to MAPK1/ERK2, citing a general ERK compartmentalization review. Reason: GO:0032872 (regulation of stress-activated MAPK cascade) is associated with JNK/p38 (SAPK) biology rather than the canonical ERK cascade. PMID:19565474 is a review of ERK signaling across subcellular compartments and does not establish ERK2 as a regulator of the stress-activated (JNK/p38) MAPK cascade; this is an over-annotation for canonical ERK2, consistent with the corresponding IEA row. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0051493 regulation of cytoskeleton organization | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of cytoskeleton organization) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0072584 caveolin-mediated endocytosis | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0090170 regulation of Golgi inheritance | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of Golgi inheritance) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:2000641 regulation of early endosome to late endosome transport | TAS PMID:19565474 The ERK signaling cascade--views from different subcellular ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process (regulation of early endosome to late endosome transport) linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0010800 positive regulation of peptidyl-threonine phosphorylation | IDA PMID:16314496 Activation of TRAP/mediator subunit TRAP220/Med1 is regulate... | KEEP AS NON CORE | Summary: MAPK1 can increase phosphorylation of downstream threonine-containing protein substrates. Reason: The term is consistent with ERK2 substrate phosphorylation, but it is less central than the direct kinase activity and ERK/MAPK cascade annotations. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family and other transcription-factor substrates in vitro and in cells; docking motifs/exosites help determine substrate recognition. |
| GO:0070371 ERK1 and ERK2 cascade | IDA PMID:16314496 Activation of TRAP/mediator subunit TRAP220/Med1 is regulate... | ACCEPT | Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade. Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0019902 phosphatase binding | IPI PMID:19494114 Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhi... | KEEP AS NON CORE | Summary: MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3. Reason: Phosphatase binding is a supported regulatory interaction, but it is not the primary catalytic function of MAPK1. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or KIM abolishes cytoplasmic anchoring. |
| GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2. Reason: ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function and this ISS/IEA assignment overstates substrate specificity. The supported catalytic terms are MAP kinase activity and protein serine/threonine kinase activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. |
| GO:0004707 MAP kinase activity | TAS PMID:10706854 Eotaxin induces degranulation and chemotaxis of eosinophils ... | ACCEPT | Summary: MAPK1/ERK2 has MAP kinase activity. Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. |
| GO:0006915 apoptotic process | TAS PMID:10958679 Hsp72-mediated suppression of c-Jun N-terminal kinase is imp... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0006935 chemotaxis | TAS PMID:10706854 Eotaxin induces degranulation and chemotaxis of eosinophils ... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0007165 signal transduction | TAS PMID:1540184 Extracellular signal-regulated kinases in T cells: character... | MODIFY | Summary: MAPK1 participates in signal transduction, but the generic term should be replaced by more specific intracellular MAPK/ERK signaling terms. Reason: Generic signal transduction underspecifies MAPK1; intracellular signal transduction and ERK/MAPK cascade terms capture the supported biology more accurately. Proposed replacements: intracellular signal transduction ERK1 and ERK2 cascade Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. file:human/MAPK1/MAPK1-deep-research-falcon.md annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. |
| GO:0007268 chemical synaptic transmission | TAS PMID:10051431 Regulation of extracellular-signal regulated kinase and c-Ju... | KEEP AS NON CORE | Summary: This is a context-dependent downstream process linked to ERK signaling. Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
| GO:0005515 protein binding | IPI PMID:17255949 Mxi2 promotes stimulus-independent ERK nuclear translocation... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:17255949. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:17255949 Mxi2 promotes stimulus-independent ERK nuclear translocation... | MODIFY | Summary: ERK1/2 bind Mxi2, a p38alpha (MAPK14) isoform (WITH/FROM Q16539-3; also MEK1 and PEA-15 listed), which promotes stimulus-independent ERK nuclear import. Reason: The principal partner studied is the p38alpha kinase isoform Mxi2 (MEK1 also listed); 'protein kinase binding' is the informative MF. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q16539-3 (Mitogen-activated protein kinase 14), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: PMID:17255949 Mxi2 is a p38alpha isoform with the ability to bind ERK1/2. file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:18060821 Structural insights into the enzymatic mechanism of the path... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:18060821. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:18060821 Structural insights into the enzymatic mechanism of the path... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:18060821. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:18616943 Phosphorylation of U24 from Human Herpes Virus type 6 (HHV-6... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:18616943. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:23602568 The protein interaction landscape of the human CMGC kinase g... | MODIFY | Summary: AP-MS interaction of ERK2 with RSK2/RPS6KA3 and RSK3/RPS6KA2 (WITH/FROM P51812, Q15349) in the CMGC kinase interaction landscape. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2, RPS6KA2/RSK3). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15349 (Ribosomal protein S6 kinase alpha-2), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:25241761 Using an in situ proximity ligation assay to systematically ... | MODIFY | Summary: Endogenous in situ proximity ligation detection of ERK2 with RSK2/RPS6KA3 and the phosphatases HePTP/PTPN7 and PTP-SL/PTPRR (WITH/FROM P51812, P35236, Q15256). Reason: The partners are a protein kinase (RSK2) and ERK-directed tyrosine phosphatases (HePTP, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:25241761 Using an in situ proximity ligation assay to systematically ... | MODIFY | Summary: Endogenous in situ proximity ligation detection of ERK2 with RSK2/RPS6KA3 and the phosphatases HePTP/PTPN7 and PTP-SL/PTPRR (WITH/FROM P51812, P35236, Q15256). Reason: The partners are a protein kinase (RSK2) and ERK-directed tyrosine phosphatases (HePTP, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15256 (Receptor-type tyrosine-protein phosphatase R), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:27880917 Phenotypic and Interaction Profiling of the Human Phosphatas... | MODIFY | Summary: Interaction of ERK2 with the MAPK phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM Q13115, Q16828, Q99956) in systematic phosphatase interaction profiling. Reason: All partners are ERK-directed dual-specificity phosphatases; 'protein phosphatase binding' is the informative MF. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q16828 (Dual specificity protein phosphatase 6), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:27880917 Phenotypic and Interaction Profiling of the Human Phosphatas... | MODIFY | Summary: Interaction of ERK2 with the MAPK phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM Q13115, Q16828, Q99956) in systematic phosphatase interaction profiling. Reason: All partners are ERK-directed dual-specificity phosphatases; 'protein phosphatase binding' is the informative MF. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q99956 (Dual specificity protein phosphatase 9), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q13115 (Dual specificity protein phosphatase 4), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15418 (Ribosomal protein S6 kinase alpha-1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q16828 (Dual specificity protein phosphatase 6), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q99956 (Dual specificity protein phosphatase 9), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:31980649. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... | MODIFY | Summary: AP-MS interactions of ERK2 in colorectal cancer cells with RSK1/2, MKNK1 and the phosphatases DUSP4, DUSP6 and DUSP9 (WITH/FROM P51812, Q15418, Q9BUB5, Q13115, Q16828, Q99956, Q9BRK4). Reason: Most partners are protein kinases (RSK1, RSK2, MNK1) or ERK-directed phosphatases (DUSP4/6/9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q9BUB5 (MAP kinase-interacting serine/threonine-protein kinase 1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | MODIFY | Summary: HuRI binary interactome (yeast two-hybrid) interactions of ERK2, including RSK3/RPS6KA2, MKNK1, DUSP4 and PTPRR among many partners. Reason: Among the reported binary partners are protein kinases (RSK3, MNK1) and ERK-directed phosphatases (DUSP4, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture the functionally interpretable subset. The remaining partners carry no functional information. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q13115 (Dual specificity protein phosphatase 4), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | MODIFY | Summary: HuRI binary interactome (yeast two-hybrid) interactions of ERK2, including RSK3/RPS6KA2, MKNK1, DUSP4 and PTPRR among many partners. Reason: Among the reported binary partners are protein kinases (RSK3, MNK1) and ERK-directed phosphatases (DUSP4, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture the functionally interpretable subset. The remaining partners carry no functional information. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15256-5 (Receptor-type tyrosine-protein phosphatase R), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | MODIFY | Summary: HuRI binary interactome (yeast two-hybrid) interactions of ERK2, including RSK3/RPS6KA2, MKNK1, DUSP4 and PTPRR among many partners. Reason: Among the reported binary partners are protein kinases (RSK3, MNK1) and ERK-directed phosphatases (DUSP4, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture the functionally interpretable subset. The remaining partners carry no functional information. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15349 (Ribosomal protein S6 kinase alpha-2), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | MODIFY | Summary: HuRI binary interactome (yeast two-hybrid) interactions of ERK2, including RSK3/RPS6KA2, MKNK1, DUSP4 and PTPRR among many partners. Reason: Among the reported binary partners are protein kinases (RSK3, MNK1) and ERK-directed phosphatases (DUSP4, PTPRR); 'protein kinase binding' and 'protein phosphatase binding' capture the functionally interpretable subset. The remaining partners carry no functional information. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q9BUB5 (MAP kinase-interacting serine/threonine-protein kinase 1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32296183 A reference map of the human binary protein interactome. | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:32296183. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:32707033 Kinase Interaction Network Expands Functional and Disease Ro... | MODIFY | Summary: Kinase interaction network interactions of ERK2 with RSK2, RSK3 and MNK1 (WITH/FROM P51812, Q15349, Q9BUB5). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2, RPS6KA2/RSK3, MKNK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15349 (Ribosomal protein S6 kinase alpha-2), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32707033 Kinase Interaction Network Expands Functional and Disease Ro... | MODIFY | Summary: Kinase interaction network interactions of ERK2 with RSK2, RSK3 and MNK1 (WITH/FROM P51812, Q15349, Q9BUB5). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA3/RSK2, RPS6KA2/RSK3, MKNK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q9BUB5 (MAP kinase-interacting serine/threonine-protein kinase 1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... | MODIFY | Summary: RASopathy-associated MAPK1 variants alter ERK2 interaction with MEK1 (WITH/FROM Q02750) and MKP3/DUSP6 (WITH/FROM Q16828). Reason: The partners are the upstream MAP kinase kinase MEK1 and the ERK phosphatase MKP3/DUSP6; 'mitogen-activated protein kinase kinase binding' and 'protein phosphatase binding' are the informative MFs. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q16828 (Dual specificity protein phosphatase 6), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: PMID:32721402 differentially impacting the ability of the altered proteins to interact with MEK1, MKP3, and substrates file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... | MODIFY | Summary: Interactome mapping hits for ERK2 including RSK1/RPS6KA1 (WITH/FROM Q15418; APP also listed). Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/RSK1). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15418 (Ribosomal protein S6 kinase alpha-1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:P51812 (Ribosomal protein S6 kinase alpha-3), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | REMOVE | Summary: This is a generic protein-binding assertion for MAPK1/ERK2 from PMID:33961781. Reason: GO:0005515 is uninformative for a multi-partner MAP kinase. This row does not distinguish substrate recognition, scaffold docking, phosphatase binding, or another specific MAPK1 regulatory interaction, so it should be replaced only if later source-specific curation can capture a mechanistically informative binding activity. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15256 (Receptor-type tyrosine-protein phosphatase R), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15349 (Ribosomal protein S6 kinase alpha-2), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15418 (Ribosomal protein S6 kinase alpha-1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q16829 (Dual specificity protein phosphatase 7), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q99956 (Dual specificity protein phosphatase 9), so only the protein phosphatase binding replacement applies to it. Proposed replacements: protein phosphatase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... | MODIFY | Summary: BioPlex AP-MS interactions of ERK2 with RSK1-3, MKNK1, PEA-15 and the phosphatases PTPRR, DUSP7 and DUSP9 (WITH/FROM includes Q15418, P51812, Q15349, Q9BUB5, Q15256, Q16829, Q99956). Reason: The partners are dominated by downstream kinases (RSKs, MNK1) and ERK-directed phosphatases (PTPRR, DUSP7, DUSP9); 'protein kinase binding' and 'protein phosphatase binding' capture these interactions more informatively. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q9BUB5 (MAP kinase-interacting serine/threonine-protein kinase 1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:34591642 A protein network map of head and neck cancer reveals PIK3CA... | MODIFY | Summary: AP-MS interactions of ERK2 with RSK1, RSK2 and RSK3 (WITH/FROM Q15418, P51812, Q15349) in a head and neck cancer protein network. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/2/3 (RSK1-3)). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15349 (Ribosomal protein S6 kinase alpha-2), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0005515 protein binding | IPI PMID:34591642 A protein network map of head and neck cancer reveals PIK3CA... | MODIFY | Summary: AP-MS interactions of ERK2 with RSK1, RSK2 and RSK3 (WITH/FROM Q15418, P51812, Q15349) in a head and neck cancer protein network. Reason: The IntAct-derived WITH/FROM partner(s) for this high-throughput interactome study are protein kinases (RPS6KA1/2/3 (RSK1-3)). The binding itself is the experimental observation, so the more informative 'protein kinase binding' captures it; the partners are well-known ERK docking-motif (D-motif) containing downstream kinases/substrates. GOA now lists this interaction as one row per partner; this row's partner is UniProtKB:Q15418 (Ribosomal protein S6 kinase alpha-1), so only the protein kinase binding replacement applies to it. Proposed replacements: protein kinase binding Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. |
| GO:0035094 response to nicotine | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: Response to nicotine is a stimulus-specific context for ERK signaling, not MAPK1/ERK2's core function. Reason: This rat MAPK1-supported ISS row can be retained as a non-core stimulus-response annotation, but the central MAPK1 role is ERK2 MAP kinase activity in the ERK/MAPK cascade; nicotine responsiveness reflects an upstream receptor pathway context. Supporting Evidence: file:human/MAPK1/MAPK1-deep-research-falcon.md Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. |
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Download this section (compressed HTML)Q: Which generic protein-binding annotations correspond to direct MAPK1 docking, substrate, scaffold, or phosphatase interactions that should be curated with more specific terms?
Q: Which downstream proliferation, apoptosis, migration, immune, neuronal, or developmental annotations have direct MAPK1-specific evidence rather than general ERK pathway membership?
Experiment: Prioritize source-level review of MAPK1-specific substrate phosphorylation papers to separate direct ERK2 substrates from phosphoproteomics or inhibitor-based pathway effects.
Experiment: Review compartment-specific MAPK1 localization evidence with stimulus and cell-type context, especially endosome, Golgi, mitochondrion, focal adhesion, and caveola annotations.
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