MAPK1 (ERK2) is an ATP-dependent, proline-directed serine/threonine MAP kinase in the canonical Ras-RAF-MEK-ERK cascade. It is activated by MEK1/2 dual phosphorylation, phosphorylates cytosolic and nuclear substrates, and shuttles between cytoplasmic/cytosolic and nuclear compartments after stimulation. Distal proliferation, differentiation, apoptosis, migration, transcriptional, and disease phenotypes are context-dependent ERK pathway outputs rather than the core MAPK1 molecular function.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005634
nucleus
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0035556
intracellular signal transduction
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: MAPK1 functions in intracellular signal transduction downstream of extracellular cues.
Reason: Intracellular signal transduction is a supported core process for MAPK1 as the ERK2 kinase in the canonical MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0007166
cell surface receptor signaling pathway
|
IBA
GO_REF:0000033 |
MODIFY |
Summary: MAPK1 responds to cell-surface receptor inputs, but its core role is the downstream intracellular ERK/MAPK cascade.
Reason: Cell surface receptor signaling is too broad and upstream-oriented for the MAPK1 core function; ERK/MAPK cascade terms are more specific.
Proposed replacements:
ERK1 and ERK2 cascade
MAPK cascade
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0004672
protein kinase activity
|
IEA
GO_REF:0000120 |
MODIFY |
Summary: MAPK1 is a protein kinase, but this term is less specific than the supported serine/threonine MAP kinase terms.
Reason: The generic protein kinase term should be replaced by protein serine/threonine kinase activity and MAP kinase activity, which capture MAPK1 specificity.
Proposed replacements:
protein serine/threonine kinase activity
MAP kinase activity
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0004707
MAP kinase activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0005524
ATP binding
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: MAPK1 binds ATP as the phosphoryl donor for kinase catalysis.
Reason: ATP binding is integral to the active-site chemistry of ERK2 kinase activity.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005769
early endosome
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This early endosome annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the early endosome location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005770
late endosome
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This late endosome annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the late endosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005794
Golgi apparatus
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This Golgi apparatus annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the Golgi apparatus location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005813
centrosome
|
IEA
GO_REF:0000044 |
MARK AS OVER ANNOTATED |
Summary: This centrosome annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the centrosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005819
spindle
|
IEA
GO_REF:0000044 |
MARK AS OVER ANNOTATED |
Summary: This spindle annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the spindle location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005901
caveola
|
IEA
GO_REF:0000044 |
MARK AS OVER ANNOTATED |
Summary: This caveola annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005925
focal adhesion
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: This focal adhesion annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the focal adhesion location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000108 |
MARK AS OVER ANNOTATED |
Summary: MAPK1 can affect transcriptional programs through downstream substrates, but broad regulation of RNA polymerase II transcription overstates the direct function.
Reason: The direct MAPK1 function is kinase activity and ERK/MAPK cascade signaling; broad transcriptional regulation should not be inferred from pathway membership alone.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0007173
epidermal growth factor receptor signaling pathway
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0010759
positive regulation of macrophage chemotaxis
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0032206
positive regulation of telomere maintenance
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: Positive regulation of telomere maintenance is inferred from a high-throughput RNAi telomerase screen (PMID:21531765) plus electronic annotation.
Reason: This is a high-throughput screen-derived, indirect pathway outcome rather than a direct MAPK1 function; it should not be elevated to a core ERK2 annotation without direct mechanistic evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0032872
regulation of stress-activated MAPK cascade
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This automated annotation places canonical ERK2 in a stress-activated MAPK cascade context.
Reason: GO:0032872 is a stress-activated MAPK cascade term associated with JNK/p38 signaling, whereas MAPK1/ERK2 is curated here as the canonical ERK/MAPK cascade kinase. The automated inference overstates the evidence.
|
|
GO:0034198
cellular response to amino acid starvation
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is an amino-acid-starvation response annotation linked to ERK signaling context.
Reason: The starvation-response annotation may be retained as non-core where the source evidence supports this context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0045202
synapse
|
IEA
GO_REF:0000108 |
MARK AS OVER ANNOTATED |
Summary: This synapse annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the synapse location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0051403
stress-activated MAPK cascade
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This automated annotation places canonical ERK2 in the stress-activated MAPK cascade.
Reason: GO:0051403 refers to stress-activated MAPK cascade biology associated with JNK/p38 signaling, not the canonical ERK1/ERK2 cascade. The automated inference should not be retained as a valid non-core MAPK1 annotation.
|
|
GO:0051493
regulation of cytoskeleton organization
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of cytoskeleton organization) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0061514
interleukin-34-mediated signaling pathway
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0070371
ERK1 and ERK2 cascade
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0070849
response to epidermal growth factor
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0072584
caveolin-mediated endocytosis
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0090170
regulation of Golgi inheritance
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of Golgi inheritance) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0097542
ciliary tip
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: This ciliary tip annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the ciliary tip location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0106310
protein serine kinase activity
|
IEA
GO_REF:0000116 |
MODIFY |
Summary: MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete for ERK2.
Reason: ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707 better capture the supported activity than a serine-only activity term.
Proposed replacements:
protein serine/threonine kinase activity
MAP kinase activity
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0120041
positive regulation of macrophage proliferation
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:2000641
regulation of early endosome to late endosome transport
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of early endosome to late endosome transport) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0005515
protein binding
|
IPI
PMID:10415025 Direct suppression of TCR-mediated activation of extracellul... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:10415025; ERK2 has many reported interacting partners. ERK2 partner recognition is mediated structurally by the docking groove (D-recruitment site), which binds short linear D-motifs in substrates and regulators; this is directly illustrated by ERK2 crystal structures with bound D-motif peptides (PDB 2Y9Q, 3TEI, 4FMQ) that define docking-groove binding specificity (PMID:23047924).
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
PMID:23047924
Mitogen-activated protein kinases (MAPKs) have a docking groove that interacts with linear "docking" motifs in binding partners.
PMID:23047924
Crystal structures of four complexes of MAPKs with docking peptides ... revealed that the regions located between consensus positions in the docking motifs showed conformational diversity.
|
|
GO:0005515
protein binding
|
IPI
PMID:10601328 A novel regulatory mechanism of MAP kinases activation and n... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:10601328; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:12592337 The protein tyrosine phosphatase HePTP regulates nuclear tra... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:12592337; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:12840032 Constitutive induction of p-Erk1/2 accompanied by reduced ac... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:12840032; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:15713638 Specific inactivation and nuclear anchoring of extracellular... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:15713638; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
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|
GO:0005515
protein binding
|
IPI
PMID:16038800 Conditional expression of MAP kinase phosphatase-2 protects ... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:16038800; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:16286470 Cooperation of ERK and SCFSkp2 for MKP-1 destruction provide... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:16286470; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:16288922 New insights into the catalytic activation of the MAPK phosp... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:16288922; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:17255944 A MAPK docking site is critical for downregulation of Capicu... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:17255944; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:17255949 Mxi2 promotes stimulus-independent ERK nuclear translocation... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:17255949; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:18060821 Structural insights into the enzymatic mechanism of the path... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18060821; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:18084305 Structural basis for the catalytic mechanism of phosphothreo... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18084305; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:18463290 Human biliverdin reductase is an ERK activator; hBVR is an E... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18463290; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:18616943 Phosphorylation of U24 from Human Herpes Virus type 6 (HHV-6... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18616943; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:19494114 Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhi... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:19494114; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:21826244 TRAPPC4-ERK2 interaction activates ERK1/2, modulates its nuc... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:21826244; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:21908610 Phosphorylation of the kinase interaction motif in mitogen-a... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:21908610; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:21988832 Toward an understanding of the protein interaction network o... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:21988832; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:22521293 ETS-dependent p16INK4a and p21waf1/cip1 gene expression upon... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:22521293; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23241949 MEK1 inactivates Myt1 to regulate Golgi membrane fragmentati... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23241949; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23455922 Interlaboratory reproducibility of large-scale human protein... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23455922; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23519423 Protein-peptide complex crystallization: a case study on the... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23519423; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23560844 Metal-dependent protein phosphatase 1A functions as an extra... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23560844; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23575685 Structure of ERK2 bound to PEA-15 reveals a mechanism for ra... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23575685; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23584453 Interaction with Shc prevents aberrant Erk activation in the... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23584453; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:23602568 The protein interaction landscape of the human CMGC kinase g... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23602568; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:25241761 Using an in situ proximity ligation assay to systematically ... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:25241761; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:25852190 Integrative analysis of kinase networks in TRAIL-induced apo... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:25852190; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:26267535 ERK2-Dependent Phosphorylation of CSN6 Is Critical in Colore... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:26267535; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:26733474 Identification of allosteric ERK2 inhibitors through in sili... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:26733474; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:27880917 Phenotypic and Interaction Profiling of the Human Phosphatas... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:27880917; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:29997244 LuTHy: a double-readout bioluminescence-based two-hybrid tec... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:29997244; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:31980649 Extensive rewiring of the EGFR network in colorectal cancer ... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:31980649; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32296183; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:32707033 Kinase Interaction Network Expands Functional and Disease Ro... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32707033; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32814053; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:33961781; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:34591642 A protein network map of head and neck cancer reveals PIK3CA... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:34591642; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:35271311 OpenCell: Endogenous tagging for the cartography of human ce... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:35271311; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:38884001 Mapping adipocyte interactome networks by HaloTag-enrichment... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:38884001; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:40205054 Multimodal cell maps as a foundation for structural and func... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:40205054; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:9632734 Activation of extracellular signal-regulated kinase 2 by a n... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:9632734; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:9788880 Isolation of the human genes encoding the pyst1 and Pyst2 ph... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:9788880; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:16627622 Direct phosphorylation and regulation of poly(ADP-ribose) po... |
KEEP AS NON CORE |
Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by PMID:16627622.
Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function.
|
|
GO:0042802
identical protein binding
|
IPI
PMID:26267534 Small Molecule Inhibition of ERK Dimerization Prevents Tumor... |
KEEP AS NON CORE |
Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by PMID:26267534.
Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function.
|
|
GO:0001784
phosphotyrosine residue binding
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This term assigns phosphotyrosine residue binding to ERK2.
Reason: ERK2 substrate and partner recognition is mediated by D-domain/KIM and DEF/FXFP docking motifs rather than by a dedicated phosphotyrosine-binding module; this automated assignment is not supported as a core ERK2 molecular function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0005739
mitochondrion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This mitochondrion annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the mitochondrion location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005829
cytosol
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0008286
insulin receptor signaling pathway
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0008353
RNA polymerase II CTD heptapeptide repeat kinase activity
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2.
Reason: ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function and this ISS/IEA assignment overstates substrate specificity. The supported catalytic terms are MAP kinase activity and protein serine/threonine kinase activity.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0014044
Schwann cell development
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0016301
kinase activity
|
IEA
GO_REF:0000107 |
MODIFY |
Summary: MAPK1 is a kinase, but this term is too broad for ERK2.
Reason: The broad kinase activity annotation should use the more informative serine/threonine MAP kinase terms.
Proposed replacements:
protein serine/threonine kinase activity
MAP kinase activity
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0019902
phosphatase binding
|
IEA
GO_REF:0000120 |
KEEP AS NON CORE |
Summary: MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3.
Reason: Phosphatase binding is a supported regulatory interaction, but it is not the primary catalytic function of MAPK1.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or KIM abolishes cytoplasmic anchoring.
|
|
GO:0031143
pseudopodium
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This pseudopodium annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the pseudopodium location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0035094
response to nicotine
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (response to nicotine) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0038133
ERBB2-ERBB3 signaling pathway
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0042552
myelination
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0042802
identical protein binding
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by GO_REF:0000107.
Reason: ERK2 dimerization is a documented property relevant to its cytoplasmic retention and scaffold interactions, but it is a regulatory/structural property rather than the core catalytic MAP kinase function.
|
|
GO:0043415
positive regulation of skeletal muscle tissue regeneration
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0048009
insulin-like growth factor receptor signaling pathway
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0150078
positive regulation of neuroinflammatory response
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0004707
MAP kinase activity
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0005829
cytosol
|
IDA
PMID:22451653 Siglec-15 protein regulates formation of functional osteocla... |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0043415
positive regulation of skeletal muscle tissue regeneration
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0106310
protein serine kinase activity
|
ISS
GO_REF:0000024 |
MODIFY |
Summary: MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete for ERK2.
Reason: ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707 better capture the supported activity than a serine-only activity term.
Proposed replacements:
protein serine/threonine kinase activity
MAP kinase activity
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:35831023 ERK2 MAP kinase regulates SUFU binding by multisite phosphor... |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0045880
positive regulation of smoothened signaling pathway
|
IDA
PMID:35831023 ERK2 MAP kinase regulates SUFU binding by multisite phosphor... |
KEEP AS NON CORE |
Summary: ERK2 phosphorylation of GLI1 links MAPK1 to Smoothened/Hedgehog pathway output in this specific context.
Reason: This is a supported pathway-specific downstream role from PMID:35831023, but the core MAPK1 function remains ERK2 serine/threonine MAP kinase activity in the ERK/MAPK cascade.
|
|
GO:0005654
nucleoplasm
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005829
cytosol
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0004707
MAP kinase activity
|
TAS
Reactome:R-HSA-111898 |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0004707
MAP kinase activity
|
TAS
Reactome:R-HSA-445079 |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0070371
ERK1 and ERK2 cascade
|
IDA
PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... |
ACCEPT |
Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0150078
positive regulation of neuroinflammatory response
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
Reason: The available synthesis supports ERK/MAPK cascade membership as core, but warns against promoting broad developmental or disease-associated outcomes to core MAPK1 functions without direct MAPK1-specific evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0004707
MAP kinase activity
|
IDA
PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0070098
chemokine-mediated signaling pathway
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (chemokine-mediated signaling pathway) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0000165
MAPK cascade
|
IDA
PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... |
ACCEPT |
Summary: MAPK1/ERK2 functions in the canonical MAPK cascade.
Reason: MAPK cascade membership is a core biological process for ERK2, downstream of Ras-RAF-MEK signaling.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0061514
interleukin-34-mediated signaling pathway
|
IGI
PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0000165
MAPK cascade
|
IDA
PMID:24854121 Endophilin-1 regulates blood-brain barrier permeability by c... |
ACCEPT |
Summary: MAPK1/ERK2 functions in the canonical MAPK cascade.
Reason: MAPK cascade membership is a core biological process for ERK2, downstream of Ras-RAF-MEK signaling.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0007173
epidermal growth factor receptor signaling pathway
|
IDA
PMID:24854121 Endophilin-1 regulates blood-brain barrier permeability by c... |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0005515
protein binding
|
IPI
PMID:26942675 Mitochondria-Translocated PGK1 Functions as a Protein Kinase... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:26942675; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0032206
positive regulation of telomere maintenance
|
IMP
PMID:21531765 High-throughput RNAi screening reveals novel regulators of t... |
MARK AS OVER ANNOTATED |
Summary: Positive regulation of telomere maintenance is inferred from a high-throughput RNAi telomerase screen (PMID:21531765) plus electronic annotation.
Reason: This is a high-throughput screen-derived, indirect pathway outcome rather than a direct MAPK1 function; it should not be elevated to a core ERK2 annotation without direct mechanistic evidence.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0045542
positive regulation of cholesterol biosynthetic process
|
IDA
PMID:38503280 A gut-derived hormone regulates cholesterol metabolism. |
KEEP AS NON CORE |
Summary: Positive regulation of cholesterol biosynthesis is an ERK2-linked downstream metabolic outcome reported in PMID:38503280.
Reason: This is a context-dependent downstream metabolic process mediated via ERK signaling rather than a core conserved MAPK1 molecular function; retained as non-core.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0005515
protein binding
|
IPI
PMID:11489891 MKP-7, a novel mitogen-activated protein kinase phosphatase,... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:11489891; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005515
protein binding
|
IPI
PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32721402; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005634
nucleus
|
IDA
PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:32721402 Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder... |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005515
protein binding
|
IPI
PMID:32051553 The EGFR-ZNF263 signaling axis silences SIX3 in glioblastoma... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:32051553; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:7588608 ERF: an ETS domain protein with strong transcriptional repre... |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0010759
positive regulation of macrophage chemotaxis
|
IGI
PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0120041
positive regulation of macrophage proliferation
|
IGI
PMID:26754294 miR-28-5p-IL-34-macrophage feedback loop modulates hepatocel... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0005515
protein binding
|
IPI
PMID:15133037 The major vault protein is a novel substrate for the tyrosin... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:15133037; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9652816 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005788
endoplasmic reticulum lumen
|
TAS
Reactome:R-HSA-9636296 |
MARK AS OVER ANNOTATED |
Summary: This is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9635739 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:26996940 Regulation of Microtubule Assembly by Tau and not by Pin1. |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0005886
plasma membrane
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This plasma membrane annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the plasma membrane location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005901
caveola
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This caveola annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0007611
learning or memory
|
NAS
PMID:11404397 Beta-amyloid activates the mitogen-activated protein kinase ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0035094
response to nicotine
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (response to nicotine) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0034198
cellular response to amino acid starvation
|
IDA
PMID:11096076 Glutamine-dependent antiapoptotic interaction of human gluta... |
KEEP AS NON CORE |
Summary: This is an amino-acid-starvation response annotation linked to ERK signaling context.
Reason: The starvation-response annotation may be retained as non-core where the source evidence supports this context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0051403
stress-activated MAPK cascade
|
IDA
PMID:11096076 Glutamine-dependent antiapoptotic interaction of human gluta... |
MARK AS OVER ANNOTATED |
Summary: This stress-activated MAPK cascade annotation on MAPK1/ERK2 derives from a paper focused on ASK1/JNK stress signaling, not the canonical ERK cascade.
Reason: GO:0051403 (stress-activated MAPK cascade) is associated with JNK/p38 (SAPK) signaling. PMID:11096076 concerns the Gln-dependent interaction of glutaminyl-tRNA synthetase with apoptosis signal-regulating kinase 1 (ASK1) and JNK/SAPK, not ERK2; assigning the stress-activated MAPK cascade to canonical ERK2 over-annotates MAPK1.
Supporting Evidence:
PMID:11096076
signal-regulating kinase 1 (ASK1) and c-Jun N-terminal kinase (JNK; also known as stress-activated protein kinase (SAPK)) in Gln-deprived cells
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6798751 |
MARK AS OVER ANNOTATED |
Summary: This is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6800434 |
MARK AS OVER ANNOTATED |
Summary: This is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0035578
azurophil granule lumen
|
TAS
Reactome:R-HSA-6798751 |
MARK AS OVER ANNOTATED |
Summary: This is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:1904813
ficolin-1-rich granule lumen
|
TAS
Reactome:R-HSA-6800434 |
MARK AS OVER ANNOTATED |
Summary: This is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization; secretory or granule-lumen locations are likely pathway-context over-annotations for soluble ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005515
protein binding
|
IPI
PMID:24735981 MFAP3L activation promotes colorectal cancer cell invasion a... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:24735981; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0006468
protein phosphorylation
|
IDA
PMID:23184662 Phosphorylation of eukaryotic elongation factor 2 (eEF2) by ... |
ACCEPT |
Summary: MAPK1 directly phosphorylates protein substrates.
Reason: Protein phosphorylation is the direct biochemical output of the MAPK1 kinase activity.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family and other transcription-factor substrates in vitro and in cells; docking motifs/exosites help determine substrate recognition.
|
|
GO:0005634
nucleus
|
HDA
PMID:16791210 Dynamic proteomics in individual human cells uncovers widesp... |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005737
cytoplasm
|
HDA
PMID:16791210 Dynamic proteomics in individual human cells uncovers widesp... |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005737
cytoplasm
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0072686
mitotic spindle
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This mitotic spindle annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the mitotic spindle location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005515
protein binding
|
IPI
PMID:23847209 Pseudophosphatase STYX modulates cell-fate decisions and cel... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:23847209; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-198746 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-198756 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-199959 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-203797 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-3132737 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-3857329 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-450325 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-5674387 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-5675373 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9032751 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9610166 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9632910 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9725030 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9765960 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-NUL-9009236 |
ACCEPT |
Summary: MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
Reason: Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-109858 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-109862 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-109864 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-111898 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1168459 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2029469 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3371531 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-418158 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-418163 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-418170 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-418176 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-418200 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-445079 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5654560 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5654562 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5654565 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5654566 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5672972 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5672973 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5672978 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5672980 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674130 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674132 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674366 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674373 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674385 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674387 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5674496 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5675194 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5675198 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5675206 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5675376 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802910 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802911 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802912 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802914 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802918 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802919 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802921 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802922 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802925 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802926 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802932 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802933 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802934 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802935 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802942 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6802943 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6803227 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6803230 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6803233 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6803234 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6811454 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-6811472 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9610152 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9610153 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9610154 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9610156 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9610166 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9626832 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9627089 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9632910 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9635743 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9636296 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9652165 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9656209 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9656211 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9656214 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9656215 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9657599 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9657603 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9657606 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9657608 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9731111 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9732753 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9734547 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9824582 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9824977 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9825759 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9845033 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-9619973 |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many Reactome reaction-level annotations placing ERK2 in the cytosol.
Reason: Cytosolic localization is a core supported localization for ERK2, which is predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The numerous Reactome cytosol rows are group-accepted as consistent with this core localization.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0038127
ERBB signaling pathway
|
IDA
PMID:15133037 The major vault protein is a novel substrate for the tyrosin... |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0005515
protein binding
|
IPI
PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:18794356; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0005634
nucleus
|
IDA
PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... |
ACCEPT |
Summary: MAPK1/ERK2 is cytoplasmic in quiescent cells.
Reason: Cytoplasmic localization is a core supported localization for ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0070849
response to epidermal growth factor
|
IDA
PMID:18794356 Extracellular signal-regulated kinase 2 (ERK2) phosphorylati... |
KEEP AS NON CORE |
Summary: MAPK1 is activated in receptor and growth-factor signaling contexts, but these are stimulus-specific pathway contexts rather than the core conserved ERK2 function.
Reason: Growth-factor and receptor-specific signaling annotations can be retained as non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0005515
protein binding
|
IPI
PMID:22253824 Localization of nucleoporin Tpr to the nuclear pore complex ... |
KEEP AS NON CORE |
Summary: This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2 from PMID:22253824; ERK2 has many reported interacting partners.
Reason: The generic protein binding term is uninformative for a multi-partner kinase like ERK2 and is retained only as a non-core interaction record. ERK partner recognition is motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate, scaffold, or phosphatase interaction is established a more informative molecular function term should be used instead of bare protein binding.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support.
|
|
GO:0004674
protein serine/threonine kinase activity
|
IDA
PMID:15850461 The phosphorylation of CapZ-interacting protein (CapZIP) by ... |
ACCEPT |
Summary: MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
Reason: Serine/threonine protein kinase activity is a core molecular function of MAPK1; the more specific MAP kinase activity term should also be retained where present.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0005634
nucleus
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
ACCEPT |
Summary: MAPK1/ERK2 localizes to the nucleus after stimulation.
Reason: Nuclear localization is supported, but should be interpreted as stimulus-dependent rather than constitutive.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
file:human/MAPK1/MAPK1-deep-research-falcon.md
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear accumulation can be partially uncoupled from TEY phosphorylation and depends on docking interactions and anchors.
|
|
GO:0005739
mitochondrion
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This mitochondrion annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the mitochondrion location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005769
early endosome
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This early endosome annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the early endosome location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005770
late endosome
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This late endosome annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the late endosome location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005794
Golgi apparatus
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This Golgi apparatus annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the Golgi apparatus location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005829
cytosol
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
ACCEPT |
Summary: MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
Reason: Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs.
|
|
GO:0005856
cytoskeleton
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This cytoskeleton annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the cytoskeleton location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005901
caveola
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This caveola annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the caveola location is a context-/pathway-specific or high- throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0005925
focal adhesion
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This focal adhesion annotation is not a supported core MAPK1 localization in this review.
Reason: Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear localization as core; the focal adhesion location is a context-/pathway-specific or high-throughput-derived assignment that should not be promoted to a core ERK2 localization without direct MAPK1-specific evidence in that compartment.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context.
|
|
GO:0032872
regulation of stress-activated MAPK cascade
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
MARK AS OVER ANNOTATED |
Summary: This TAS annotation assigns regulation of the stress-activated MAPK cascade to MAPK1/ERK2, citing a general ERK compartmentalization review.
Reason: GO:0032872 (regulation of stress-activated MAPK cascade) is associated with JNK/p38 (SAPK) biology rather than the canonical ERK cascade. PMID:19565474 is a review of ERK signaling across subcellular compartments and does not establish ERK2 as a regulator of the stress-activated (JNK/p38) MAPK cascade; this is an over-annotation for canonical ERK2, consistent with the corresponding IEA row.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0051493
regulation of cytoskeleton organization
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of cytoskeleton organization) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0072584
caveolin-mediated endocytosis
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0090170
regulation of Golgi inheritance
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of Golgi inheritance) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:2000641
regulation of early endosome to late endosome transport
|
TAS
PMID:19565474 The ERK signaling cascade--views from different subcellular ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process (regulation of early endosome to late endosome transport) linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function, which is ERK2 MAP kinase activity in the ERK/MAPK cascade.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0010800
positive regulation of peptidyl-threonine phosphorylation
|
IDA
PMID:16314496 Activation of TRAP/mediator subunit TRAP220/Med1 is regulate... |
KEEP AS NON CORE |
Summary: MAPK1 can increase phosphorylation of downstream threonine-containing protein substrates.
Reason: The term is consistent with ERK2 substrate phosphorylation, but it is less central than the direct kinase activity and ERK/MAPK cascade annotations.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family and other transcription-factor substrates in vitro and in cells; docking motifs/exosites help determine substrate recognition.
|
|
GO:0070371
ERK1 and ERK2 cascade
|
IDA
PMID:16314496 Activation of TRAP/mediator subunit TRAP220/Med1 is regulate... |
ACCEPT |
Summary: MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
Reason: ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than generic signaling process terms.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0019902
phosphatase binding
|
IPI
PMID:19494114 Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhi... |
KEEP AS NON CORE |
Summary: MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3.
Reason: Phosphatase binding is a supported regulatory interaction, but it is not the primary catalytic function of MAPK1.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or KIM abolishes cytoplasmic anchoring.
|
|
GO:0008353
RNA polymerase II CTD heptapeptide repeat kinase activity
|
ISS
GO_REF:0000024 |
MARK AS OVER ANNOTATED |
Summary: This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2.
Reason: ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function and this ISS/IEA assignment overstates substrate specificity. The supported catalytic terms are MAP kinase activity and protein serine/threonine kinase activity.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
|
|
GO:0004707
MAP kinase activity
|
TAS
PMID:10706854 Eotaxin induces degranulation and chemotaxis of eosinophils ... |
ACCEPT |
Summary: MAPK1/ERK2 has MAP kinase activity.
Reason: MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro.
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
|
|
GO:0006915
apoptotic process
|
TAS
PMID:10958679 Hsp72-mediated suppression of c-Jun N-terminal kinase is imp... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0006935
chemotaxis
|
TAS
PMID:10706854 Eotaxin induces degranulation and chemotaxis of eosinophils ... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
|
GO:0007165
signal transduction
|
TAS
PMID:1540184 Extracellular signal-regulated kinases in T cells: character... |
MODIFY |
Summary: MAPK1 participates in signal transduction, but the generic term should be replaced by more specific intracellular MAPK/ERK signaling terms.
Reason: Generic signal transduction underspecifies MAPK1; intracellular signal transduction and ERK/MAPK cascade terms capture the supported biology more accurately.
Proposed replacements:
intracellular signal transduction
ERK1 and ERK2 cascade
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses.
file:human/MAPK1/MAPK1-deep-research-falcon.md
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular signal transduction**; optionally include **response to growth factor** where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes.
|
|
GO:0007268
chemical synaptic transmission
|
TAS
PMID:10051431 Regulation of extracellular-signal regulated kinase and c-Ju... |
KEEP AS NON CORE |
Summary: This is a context-dependent downstream process linked to ERK signaling.
Reason: The process may be retained as non-core where the source evidence supports a specific context, but it should not be treated as the core conserved MAPK1 function.
Supporting Evidence:
file:human/MAPK1/MAPK1-deep-research-falcon.md
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions.
|
Q: Which generic protein-binding annotations correspond to direct MAPK1 docking, substrate, scaffold, or phosphatase interactions that should be curated with more specific terms?
Q: Which downstream proliferation, apoptosis, migration, immune, neuronal, or developmental annotations have direct MAPK1-specific evidence rather than general ERK pathway membership?
Experiment: Prioritize source-level review of MAPK1-specific substrate phosphorylation papers to separate direct ERK2 substrates from phosphoproteomics or inhibitor-based pathway effects.
Experiment: Review compartment-specific MAPK1 localization evidence with stimulus and cell-type context, especially endosome, Golgi, mitochondrion, focal adhesion, and caveola annotations.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
Concise GO annotation research for human MAPK1 / UniProt P28482 (mitogen-activated protein kinase 1, ERK2). Focus only on GO-relevant evidence: core molecular function as a serine/threonine protein kinase/MAP kinase with ATP binding and phosphotransfer activity; activation by dual phosphorylation by MEK1/2; core roles in MAPK cascade, ERK1/ERK2 cascade, intracellular signal transduction, response to growth factors; nuclear/cytoplasmic localization and stimulus-dependent nuclear translocation; substrates and downstream processes including transcription factor phosphorylation, cell proliferation/differentiation, apoptosis/senescence, cell migration, and whether these should be core or non-core; scaffold/protein binding annotations; over-annotation risks for generic protein binding, broad development/cancer/cell cycle/transcription terms, high-throughput substrate claims, and phenotypes from inhibitor/overexpression studies. Include caveats distinguishing direct MAPK1 kinase activity from downstream pathway outcomes. Include PMID/DOI citations and keep under 1500 words.
MAPK1 (ERK2) is best annotated in GO by (i) conserved biochemical activity (ATP-dependent, proline-directed Ser/Thr protein kinase), (ii) conserved activation mechanism (MEK1/2 dual phosphorylation of the activation loop), (iii) conserved pathway placement (MAPK/ERK cascade downstream of Ras–Raf–MEK), (iv) experimentally supported subcellular distribution (cytoplasm↔nucleus shuttling with stimulus-dependent nuclear accumulation), and (v) motif/exosite-mediated docking interactions that govern partner binding and spatial regulation. Downstream phenotypes (proliferation, differentiation, apoptosis, senescence, migration) are frequently ERK-pathway outcomes and are high risk for over-annotation unless direct MAPK1-specific causality is demonstrated. (novak2023mutationinthe pages 1-2, karlsson2006spatiotemporalregulationof pages 1-2, caunt2010stimulusinduceduncouplingof pages 1-2)
Protein serine/threonine kinase activity (MAP kinase) + ATP binding. ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the relevant phosphoryl donor in vitro. (rainey2004astructurefunctionanalysis pages 20-24, rainey2004astructurefunctionanalysis pages 24-29, waas2003physiologicalconcentrationsof pages 1-2)
Mechanistic detail useful for MF curation. Structural/biophysical descriptions emphasize ATP binding by the N-lobe (β strands and glycine-rich loop) and ATP/substrate engagement by both lobes; this supports annotating “ATP binding” and “protein serine/threonine kinase activity” as core MF terms. (novak2023mutationinthe pages 1-2)
Data/quantitative note. Dual phosphorylation causes an extremely large increase in catalytic efficiency (reported as ~600,000-fold in one mechanistic source), emphasizing that “active ERK2 kinase activity” is conditional on upstream activation. (rainey2004astructurefunctionanalysis pages 24-29)
Dual phosphorylation by MEK1/2. ERK activation requires phosphorylation on one threonine and one tyrosine in the activation loop by the dual-specificity kinase MEK (MAPKK/ERK kinase). This is described in biochemical/structural terms and is central to GO BP annotation for MAPK cascade. (butch1996characterizationoferk1 pages 1-2, novak2023mutationinthe pages 1-2)
Site mapping (ERK2). Recent ERK2-focused biochemical work explicitly identifies the ERK2 activation loop residues as Thr185 and Tyr187 (ERK1: Thr202/Tyr204), phosphorylated by MEK1/2. (novak2023mutationinthe pages 1-2)
Specificity note (curation relevance). MEK is described as highly specific for ERK (“only known substrate for MEK” in the cited source), supporting a conservative upstream relationship (MAPKK→MAPK) rather than broad “protein kinase regulator activity” claims. (butch1996characterizationoferk1 pages 1-2)
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal transduction cascade, converting extracellular cues (including growth factors/serum) into intracellular phosphorylation events and responses. (novak2023mutationinthe pages 1-2, rainey2004astructurefunctionanalysis pages 20-24, waas2003physiologicalconcentrationsof pages 1-2)
GO-relevant framing: annotate ERK2 to MAPK cascade / ERK1 and ERK2 cascade and intracellular signal transduction; optionally include response to growth factor where the evidence is directly about upstream stimuli triggering ERK activation/translocation rather than downstream phenotypes. (waas2003physiologicalconcentrationsof pages 1-2, karlsson2006spatiotemporalregulationof pages 1-2)
Many sources link ERK signaling to proliferation/differentiation and disease contexts, but these are typically emergent outcomes of the pathway rather than direct MAPK1 enzymatic functions. For example, ERK signaling is described as converting stimuli into proliferation/differentiation and being implicated in oncogenic transformation when deregulated. These statements support pathway-level BP terms, but do not automatically justify GO terms like “cell cycle,” “transcription,” “cancer,” or broad developmental processes as core MAPK1 BPs. (novak2023mutationinthe pages 1-2, butch1996characterizationoferk1 pages 1-2)
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes to induced gene expression programs. (karlsson2006spatiotemporalregulationof pages 1-2)
ERK lacks obvious intrinsic NLS/NES elements, implying nuclear-cytoplasmic trafficking depends on binding partners that carry localization motifs (e.g., MEK, DUSPs, scaffolds). (karlsson2006spatiotemporalregulationof pages 1-2, caunt2006seventransmembranereceptorsignalling pages 2-3, caunt2010stimulusinduceduncouplingof pages 1-2)
Stimulus-induced nuclear localization is not always proportional to TEY phosphorylation; a phosphorylation-independent component of nuclear accumulation can depend on D-domain docking interactions (e.g., reduced by ERK2 D319N affecting the D-domain binding interface). This supports annotating “stimulus-dependent nuclear translocation” cautiously and discourages inferring nuclear localization solely from phospho-ERK immunoblot signals. (caunt2010stimulusinduceduncouplingof pages 1-2, caunt2010stimulusinduceduncouplingof pages 2-3)
ERK docking is mediated by defined motifs and complementary exosites: D-domains/KIMs and DEF/FXFP motifs on partners bind ERK CD/FRS-related surfaces and other exosites. Biochemical peptide-competition experiments show docking-site peptides from MEK/MKPs/Elk-1 can inhibit MEK2–ERK2 binding and ERK2 phosphorylation of Elk-1-like substrates, indicating docking interactions are crucial for enzymatic function. (bardwell2003dockingsiteson pages 5-6, rainey2004astructurefunctionanalysis pages 24-29)
Because docking is motif-driven and structurally/biochemically dissectable, using only “protein binding” is typically uninformative and risks over-annotation. Additionally, yeast two-hybrid and peptide-based assays may capture indirect interactions or partial interfaces, so direct “binding” annotations should be limited to partners with orthogonal support. (rainey2004astructurefunctionanalysis pages 29-33, rainey2004astructurefunctionanalysis pages 24-29)
Strongest direct evidence comes from direct biochemical phosphorylation assays and/or site-level validation. Examples in the evidence set include:
- ERK2 phosphorylation of an ETS-derived substrate (EtsΔ138) at Thr-38 in vitro (example of direct Ser/Thr-Pro phosphorylation). (waas2003physiologicalconcentrationsof pages 1-2)
- ERK2 phosphorylation of Elk-1–derived peptide/protein substrates in vitro assays using purified, dually phosphorylated ERK2. (bardwell2003dockingsiteson pages 5-6)
A later review compiles additional site-level candidates (e.g., PKM2 Ser37; PAK1 Thr212; PFAS Thr619) but also notes that some are based on global phosphoproteomics and context-dependent signaling; these are useful for hypothesis generation but should not all be elevated to “direct substrate” GO annotations without independent validation. (martin–vega2025erk12mapksignalingmetabolic pages 3-5)
A major 2024 development relevant to GO curation is direct structural and functional evidence for an ERK2 binding interaction that regulates a process independently of ERK kinase activity. Becker et al. (Cell Reports, 2024-10; DOI:10.1016/j.celrep.2024.114831; URL: https://doi.org/10.1016/j.celrep.2024.114831) report a cryo-EM DHPS–ERK2 complex in which ERK2 physically occludes access to the DHPS active site, inhibiting deoxyhypusination in vitro, and show the interaction can be regulated by ERK2 regions outside the catalytic site (including an ERK2 Ser-Pro-Ser motif). This supports a careful “protein binding”/complex annotation for a specific partner (DHPS) and highlights that not all ERK2-associated biological outcomes are mediated by phosphorylation. (becker2024erk12interactionwith pages 1-3, becker2024erk12interactionwith media 4b826433, becker2024erk12interactionwith media dca6815c)
While ERK pathway activity is frequently associated with proliferation, differentiation, apoptosis/senescence, and migration, these are often downstream, cell-type- and stimulus-dependent outcomes mediated by networks of effectors and feedback loops. GO BP annotation for MAPK1 should therefore prioritize cascade membership and signal transduction, and use downstream process terms only when MAPK1-specific, direct mechanistic links (not only inhibitor/overexpression phenotypes) are demonstrated. (novak2023mutationinthe pages 1-2, caunt2010stimulusinduceduncouplingof pages 1-2, martin–vega2025erk12mapksignalingmetabolic pages 3-5)
ERK pathway components are major drug targets; however, therapeutic studies primarily inform pathway perturbation phenotypes rather than MAPK1 core GO functions. In a 2024 cardiovascular-focused review, ERK dimerization/autophosphorylation and nuclear shuttling mechanisms are discussed alongside peptide tools that perturb ERK dimerization or ERK–Importin7 interaction, illustrating how localization/complex formation is a practical intervention axis. These are useful as mechanistic context for CC annotations (nuclear translocation) but should not be used to assert broad disease-process GO terms for MAPK1. (mohammed2024mekinhibitorsa pages 2-3)
The table below summarizes the most defensible GO scope from the evidence.
| GO aspect | Recommended core GO term(s) | Evidence type | Key supporting statements | Key citation IDs | Over-annotation caveat |
|---|---|---|---|---|---|
| MF | protein serine/threonine kinase activity; mitogen-activated protein kinase activity; ATP binding | direct biochemical | ERK2 is a Ser/Thr MAPK that transfers phosphate from ATP/MgATP to Ser/Thr-Pro motifs; ATP binds in the active site, with N-lobe/glycine-rich loop contributions to nucleotide binding and catalysis. | (rainey2004astructurefunctionanalysis pages 20-24, rainey2004astructurefunctionanalysis pages 24-29, waas2003physiologicalconcentrationsof pages 1-2, novak2023mutationinthe pages 1-2) | Do not infer tyrosine kinase activity, broad “catalytic activity,” or substrate-level specificity beyond supported proline-directed Ser/Thr phosphorylation. |
| MF | MAP kinase kinase activity toward protein substrates | direct biochemical | Catalytic efficiency rises dramatically after dual phosphorylation; purified dually phosphorylated ERK2 phosphorylates peptide/protein substrates, including Elk-1-derived peptides and ETS/Runx-related transcription factor substrates in biochemical assays. | (rainey2004astructurefunctionanalysis pages 24-29, bardwell2003dockingsiteson pages 5-6, waas2003physiologicalconcentrationsof pages 1-2) | Do not treat every phosphoproteomics hit or motif-containing protein as a direct MAPK1 substrate. |
| BP | ERK1 and ERK2 cascade; MAPK cascade; intracellular signal transduction; response to growth factor | review/mechanistic plus direct pathway evidence | ERK2 is a principal effector downstream of Ras-Raf-MEK; activated by extracellular stimuli including serum/growth factors and mediates canonical MAPK/ERK signaling. | (novak2023mutationinthe pages 1-2, waas2003physiologicalconcentrationsof pages 1-2, rainey2004astructurefunctionanalysis pages 20-24) | Keep pathway terms close to the conserved cascade; avoid annotating broad disease, cancer, development, or generic transcription terms from pathway membership alone. |
| BP | positive regulation of protein phosphorylation of direct substrates; phosphorylation of transcription factors | direct biochemical | ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family and other transcription-factor substrates in vitro and in cells; docking motifs/exosites help determine substrate recognition. | (bardwell2003dockingsiteson pages 5-6, waas2003physiologicalconcentrationsof pages 1-2, rainey2004astructurefunctionanalysis pages 24-29) | Direct substrate phosphorylation can support narrower process terms only when the substrate/process link is demonstrated; do not infer all downstream transcriptional programs as direct MAPK1 functions. |
| BP | regulation of cell proliferation/differentiation; apoptosis/senescence; cell migration | review/mechanistic, usually non-core | Literature links ERK2 signaling to proliferation, differentiation, survival/death decisions, and motility, often through many downstream effectors and context-specific scaffolds. | (novak2023mutationinthe pages 1-2, martin–vega2025erk12mapksignalingmetabolic pages 3-5, butch1996characterizationoferk1 pages 1-2) | These are often pathway outcomes, not direct MAPK1 actions; avoid making them core GO annotations unless supported by direct loss-of-function/rescue and mechanistic evidence specific to MAPK1. |
| CC | cytoplasm; nucleus | cell biology localization | In quiescent cells ERK is mainly cytoplasmic; after activation it accumulates in the nucleus. ERK lacks clear intrinsic NLS/NES and relies on partner-mediated trafficking. | (karlsson2006spatiotemporalregulationof pages 1-2, caunt2006seventransmembranereceptorsignalling pages 2-3, caunt2010stimulusinduceduncouplingof pages 1-2, caunt2010stimulusinduceduncouplingof pages 2-3) | Prefer cytoplasm/nucleus over highly specific compartments unless direct localization evidence exists for MAPK1 itself in that context. |
| CC | cytoplasm to nucleus translocation upon stimulation | cell biology localization | MEK binds inactive ERK in the cytoplasm; TEY phosphorylation and release from anchors permit nuclear accumulation. Nuclear localization depends on phosphorylation but can also require D-domain interactions beyond phosphorylation alone. | (karlsson2006spatiotemporalregulationof pages 1-2, caunt2010stimulusinduceduncouplingof pages 1-2, caunt2010stimulusinduceduncouplingof pages 2-3) | Do not annotate constitutive nuclear localization; stimulus dependence matters, and nuclear entry should not be inferred solely from ERK phosphorylation readouts. |
| CC | cytoplasmic anchoring complex with MEK/DUSP6-like regulators; nuclear sequestration with DUSP5-like regulators | cell biology localization; review/mechanistic | MEK NES helps anchor inactive ERK in cytoplasm; DUSP6/MKP-3 tethers inactive ERK2 in cytoplasm; DUSP5 contains an NLS and can inactivate/sequester ERK2 in the nucleus. | (karlsson2006spatiotemporalregulationof pages 2-3, karlsson2006spatiotemporalregulationof pages 1-2, caunt2010stimulusinduceduncouplingof pages 11-11) | These support localization regulation and specific complexes, not broad stable residence in every compartment or all phosphatase-binding annotations. |
| MF | sequence-specific protein docking / scaffold-mediated binding | direct biochemical; review/mechanistic | ERK2 recognizes D-domain/KIM and DEF/FXFP docking motifs through common-docking and exosite regions; these interactions are crucial for MEK, MKP, Elk-1 and scaffold/substrate binding. | (rainey2004astructurefunctionanalysis pages 24-29, bardwell2003dockingsiteson pages 5-6, rainey2004astructurefunctionanalysis pages 29-33) | Avoid generic “protein binding” if a more informative docking/scaffold interaction term can be used; also avoid inferring direct binding from yeast two-hybrid or peptide competition alone without orthogonal support. |
| BP | scaffold-mediated spatial regulation of MAPK signaling | review/mechanistic | Scaffold and anchoring proteins such as β-arrestin, Naf1, paxillin/GIT1/IQGAP1/KSR1 shape where ERK signals and which outputs are engaged. | (rainey2004astructurefunctionanalysis pages 29-33, martin–vega2025erk12mapksignalingmetabolic pages 3-5) | Scaffold-dependent localization does not automatically justify annotating MAPK1 to every scaffold’s biological process or cellular site. |
| BP | nuclear transcription factor phosphorylation leading to gene expression changes | direct substrate plus mechanistic | ERK nuclear translocation enables phosphorylation of nuclear substrates such as Elk-1 and related transcription factors that contribute to induced gene expression. | (caunt2006seventransmembranereceptorsignalling pages 2-3, bardwell2003dockingsiteson pages 5-6, butch1996characterizationoferk1 pages 1-2) | Annotate the direct phosphorylation event or upstream signaling role rather than broad “regulation of transcription” unless MAPK1-specific causality is directly established. |
| General guidance | core set should emphasize kinase activity, MEK-dependent activation, MAPK/ERK cascade role, intracellular signaling, and cytoplasm/nucleus shuttling | synthesis | Best-supported core annotations are those nearest to direct chemistry, canonical pathway position, and experimentally observed localization dynamics. | (novak2023mutationinthe pages 1-2, karlsson2006spatiotemporalregulationof pages 1-2, caunt2010stimulusinduceduncouplingof pages 1-2) | Be cautious with inhibitor/overexpression phenotypes, cancer-context reviews, and high-throughput substrate claims; distinguish direct MAPK1 action from downstream pathway outcomes. |
Table: This table summarizes GO-relevant evidence and annotation boundaries for human MAPK1/ERK2 using only the provided evidence contexts. It highlights the strongest core annotations and flags common over-annotation risks for downstream phenotypes, generic binding, and indirect pathway outcomes.
References
(novak2023mutationinthe pages 1-2): Leonore Novak, Maria Petrosino, Alessandra Pasquo, Apirat Chaikuad, Roberta Chiaraluce, Stefan Knapp, and Valerio Consalvi. Mutation in the common docking domain affects map kinase erk2 catalysis and stability. Cancers, 15:2938, May 2023. URL: https://doi.org/10.3390/cancers15112938, doi:10.3390/cancers15112938. This article has 7 citations.
(karlsson2006spatiotemporalregulationof pages 1-2): M. Karlsson, M. Mandl, and S.M. Keyse. Spatio-temporal regulation of mitogen-activated protein kinase (mapk) signalling by protein phosphatases. Biochemical Society transactions, 34 Pt 5:842-5, Oct 2006. URL: https://doi.org/10.1042/bst0340842, doi:10.1042/bst0340842. This article has 35 citations and is from a peer-reviewed journal.
(caunt2010stimulusinduceduncouplingof pages 1-2): Christopher J. Caunt and Craig A. McArdle. Stimulus-induced uncoupling of extracellular signal-regulated kinase phosphorylation from nuclear localization is dependent on docking domain interactions. Journal of Cell Science, 123:4310-4320, Dec 2010. URL: https://doi.org/10.1242/jcs.076349, doi:10.1242/jcs.076349. This article has 34 citations and is from a domain leading peer-reviewed journal.
(rainey2004astructurefunctionanalysis pages 20-24): MA Rainey. A structure/function analysis of macromolecular recognition by the protein kinase erk2. Unknown journal, 2004.
(rainey2004astructurefunctionanalysis pages 24-29): MA Rainey. A structure/function analysis of macromolecular recognition by the protein kinase erk2. Unknown journal, 2004.
(waas2003physiologicalconcentrationsof pages 1-2): William F. Waas and Kevin N. Dalby. Physiological concentrations of divalent magnesium ion activate the serine/threonine specific protein kinase erk2. Biochemistry, 42 10:2960-70, Mar 2003. URL: https://doi.org/10.1021/bi027171w, doi:10.1021/bi027171w. This article has 60 citations and is from a peer-reviewed journal.
(butch1996characterizationoferk1 pages 1-2): Elizabeth R. Butch and Kun-Liang Guan. Characterization of erk1 activation site mutants and the effect on recognition by mek1 and mek2 (*). The Journal of Biological Chemistry, 271:4230-4235, Feb 1996. URL: https://doi.org/10.1074/jbc.271.8.4230, doi:10.1074/jbc.271.8.4230. This article has 77 citations.
(caunt2006seventransmembranereceptorsignalling pages 2-3): Christopher J. Caunt, Ann R. Finch, Kathleen R. Sedgley, and Craig A. McArdle. Seven-transmembrane receptor signalling and erk compartmentalization. Trends in Endocrinology & Metabolism, 17:276-283, Sep 2006. URL: https://doi.org/10.1016/j.tem.2006.07.008, doi:10.1016/j.tem.2006.07.008. This article has 115 citations and is from a domain leading peer-reviewed journal.
(karlsson2006spatiotemporalregulationof pages 2-3): M. Karlsson, M. Mandl, and S.M. Keyse. Spatio-temporal regulation of mitogen-activated protein kinase (mapk) signalling by protein phosphatases. Biochemical Society transactions, 34 Pt 5:842-5, Oct 2006. URL: https://doi.org/10.1042/bst0340842, doi:10.1042/bst0340842. This article has 35 citations and is from a peer-reviewed journal.
(caunt2010stimulusinduceduncouplingof pages 2-3): Christopher J. Caunt and Craig A. McArdle. Stimulus-induced uncoupling of extracellular signal-regulated kinase phosphorylation from nuclear localization is dependent on docking domain interactions. Journal of Cell Science, 123:4310-4320, Dec 2010. URL: https://doi.org/10.1242/jcs.076349, doi:10.1242/jcs.076349. This article has 34 citations and is from a domain leading peer-reviewed journal.
(bardwell2003dockingsiteson pages 5-6): A. Jane BARDWELL, Mahsa ABDOLLAHI, and Lee BARDWELL. Docking sites on mitogen-activated protein kinase (mapk) kinases, mapk phosphatases and the elk-1 transcription factor compete for mapk binding and are crucial for enzymic activity. Biochemical Journal, 370:1077-1085, Mar 2003. URL: https://doi.org/10.1042/bj20021806, doi:10.1042/bj20021806. This article has 150 citations and is from a domain leading peer-reviewed journal.
(rainey2004astructurefunctionanalysis pages 29-33): MA Rainey. A structure/function analysis of macromolecular recognition by the protein kinase erk2. Unknown journal, 2004.
(martin–vega2025erk12mapksignalingmetabolic pages 3-5): Ana Martin–Vega and Melanie H. Cobb. Erk1/2-mapk signaling: metabolic, organellar, and cytoskeletal interactions. Current Opinion in Cell Biology, 95:102526, Aug 2025. URL: https://doi.org/10.1016/j.ceb.2025.102526, doi:10.1016/j.ceb.2025.102526. This article has 12 citations and is from a peer-reviewed journal.
(becker2024erk12interactionwith pages 1-3): Andrew E. Becker, Paweł Kochanowski, Pui-Kei Wu, Elżbieta Wątor, Wenjing Chen, Koushik Guchhait, Artur P. Biela, Przemysław Grudnik, and Jong-In Park. Erk1/2 interaction with dhps regulates eif5a deoxyhypusination independently of erk kinase activity. Cell reports, 43:114831-114831, Oct 2024. URL: https://doi.org/10.1016/j.celrep.2024.114831, doi:10.1016/j.celrep.2024.114831. This article has 4 citations and is from a highest quality peer-reviewed journal.
(becker2024erk12interactionwith media 4b826433): Andrew E. Becker, Paweł Kochanowski, Pui-Kei Wu, Elżbieta Wątor, Wenjing Chen, Koushik Guchhait, Artur P. Biela, Przemysław Grudnik, and Jong-In Park. Erk1/2 interaction with dhps regulates eif5a deoxyhypusination independently of erk kinase activity. Cell reports, 43:114831-114831, Oct 2024. URL: https://doi.org/10.1016/j.celrep.2024.114831, doi:10.1016/j.celrep.2024.114831. This article has 4 citations and is from a highest quality peer-reviewed journal.
(becker2024erk12interactionwith media dca6815c): Andrew E. Becker, Paweł Kochanowski, Pui-Kei Wu, Elżbieta Wątor, Wenjing Chen, Koushik Guchhait, Artur P. Biela, Przemysław Grudnik, and Jong-In Park. Erk1/2 interaction with dhps regulates eif5a deoxyhypusination independently of erk kinase activity. Cell reports, 43:114831-114831, Oct 2024. URL: https://doi.org/10.1016/j.celrep.2024.114831, doi:10.1016/j.celrep.2024.114831. This article has 4 citations and is from a highest quality peer-reviewed journal.
(mohammed2024mekinhibitorsa pages 2-3): Khaled A. K. Mohammed, Paolo Madeddu, and Elisa Avolio. Mek inhibitors: a promising targeted therapy for cardiovascular disease. Frontiers in Cardiovascular Medicine, Jul 2024. URL: https://doi.org/10.3389/fcvm.2024.1404253, doi:10.3389/fcvm.2024.1404253. This article has 17 citations and is from a peer-reviewed journal.
(caunt2010stimulusinduceduncouplingof pages 11-11): Christopher J. Caunt and Craig A. McArdle. Stimulus-induced uncoupling of extracellular signal-regulated kinase phosphorylation from nuclear localization is dependent on docking domain interactions. Journal of Cell Science, 123:4310-4320, Dec 2010. URL: https://doi.org/10.1242/jcs.076349, doi:10.1242/jcs.076349. This article has 34 citations and is from a domain leading peer-reviewed journal.
Initial Falcon pass, 2026-05-12. MAPK1/ERK2 started as a fully pending review
with 276 existing annotations, so this pass focuses on the safest term-level
curation rather than attempting a primary-source review of every substrate,
interaction, Reactome, and phenotype annotation.
Core molecular function: MAPK1 is ERK2, an ATP-dependent serine/threonine MAP
kinase. Falcon summarizes the core enzymology as direct ATP-dependent
phosphotransfer [file:human/MAPK1/MAPK1-deep-research-falcon.md "ERK2 is a
Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like
other protein kinases it binds ATP in an active-site cleft, with MgATP2−
serving as the relevant phosphoryl donor in vitro."]. I therefore accepted MAP
kinase activity, protein serine/threonine kinase activity, ATP binding, and
protein phosphorylation, while modifying broader or incomplete kinase terms to
the specific MAP kinase/serine-threonine kinase terms.
Core process: the most defensible biological process is canonical ERK/MAPK
cascade signal transduction. Falcon places ERK2 downstream of Ras-RAF-MEK and
growth-factor inputs [file:human/MAPK1/MAPK1-deep-research-falcon.md "ERK2 is
consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK signal
transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses."]. I
accepted ERK1 and ERK2 cascade, MAPK cascade, and intracellular signal
transduction, and kept receptor-specific contexts such as EGFR/ERBB/insulin
signaling as non-core.
Core localization: the best-supported localizations are cytoplasmic/cytosolic
localization in unstimulated cells plus stimulus-dependent nuclear
accumulation. Falcon states that ERK is mainly cytoplasmic in quiescent cells
and accumulates in the nucleus after activation
[file:human/MAPK1/MAPK1-deep-research-falcon.md "ERK is predominantly
cytoplasmic in quiescent cells and accumulates in the nucleus after activation
by certain stimuli; nuclear ERK phosphorylates nuclear targets and contributes
to induced gene expression programs."]. I accepted cytoplasm, cytosol, nucleus,
and one nucleoplasm row with this stimulus-dependent caveat. Most repetitive
Reactome cytosol/nucleoplasm rows and more specific compartments remain pending
unless later primary-source review supports a stronger decision.
Over-annotation cautions: Falcon explicitly warns that downstream proliferation,
differentiation, apoptosis, migration, developmental, transcriptional, and
disease terms are often ERK pathway outcomes rather than direct MAPK1
functions [file:human/MAPK1/MAPK1-deep-research-falcon.md "Many sources link
ERK signaling to proliferation/differentiation and disease contexts, but these
are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions."]. I marked a small set of automated broad developmental
or transcriptional annotations as over-annotated and retained some source-backed
downstream processes as non-core.
Review follow-up: stress-activated MAPK cascade terms should not be treated as
valid non-core ERK2 biology, because GO:0051403/GO:0032872 are JNK/p38-oriented
stress MAPK terms rather than canonical ERK cascade terms. I marked the
automated stress-cascade rows as over-annotated and left the PMID-backed rows
UNDECIDED pending source-level review.
Protein binding: MAPK1 has many reported interacting partners, but the generic
GO:0005515 term is not useful for this gene. Falcon notes that ERK docking is
motif/exosite-mediated and that generic protein binding risks over-annotation
[file:human/MAPK1/MAPK1-deep-research-falcon.md "Because docking is
motif-driven and structurally/biochemically dissectable, using only “protein
binding” is typically uninformative and risks over-annotation."]. I left the
generic protein-binding rows pending for partner-specific follow-up, while
keeping the more informative phosphatase-binding term as non-core.
Left for later: a source-level review should triage individual substrates,
protein interactions, Reactome location rows, and old TAS/NAS phenotype rows.
Several annotations remain PENDING where I did not inspect the primary
publication.
id: P28482
gene_symbol: MAPK1
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
MAPK1 (ERK2) is an ATP-dependent, proline-directed serine/threonine MAP kinase
in the canonical Ras-RAF-MEK-ERK cascade. It is activated by MEK1/2 dual
phosphorylation, phosphorylates cytosolic and nuclear substrates, and shuttles
between cytoplasmic/cytosolic and nuclear compartments after stimulation.
Distal proliferation, differentiation, apoptosis, migration, transcriptional,
and disease phenotypes are context-dependent ERK pathway outputs rather than
the core MAPK1 molecular function.
alternative_products:
- name: '1'
id: P28482-1
- name: '2'
id: P28482-2
sequence_note: VSP_047815
existing_annotations:
- term:
id: GO:0005634
label: nucleus
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0035556
label: intracellular signal transduction
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
MAPK1 functions in intracellular signal transduction downstream of extracellular
cues.
action: ACCEPT
reason: >-
Intracellular signal transduction is a supported core process for MAPK1 as the
ERK2 kinase in the canonical MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0007166
label: cell surface receptor signaling pathway
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
MAPK1 responds to cell-surface receptor inputs, but its core role is the
downstream intracellular ERK/MAPK cascade.
action: MODIFY
reason: >-
Cell surface receptor signaling is too broad and upstream-oriented for the MAPK1
core function; ERK/MAPK cascade terms are more specific.
proposed_replacement_terms:
- id: GO:0070371
label: ERK1 and ERK2 cascade
- id: GO:0000165
label: MAPK cascade
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0004672
label: protein kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
MAPK1 is a protein kinase, but this term is less specific than the supported
serine/threonine MAP kinase terms.
action: MODIFY
reason: >-
The generic protein kinase term should be replaced by protein serine/threonine
kinase activity and MAP kinase activity, which capture MAPK1 specificity.
proposed_replacement_terms:
- id: GO:0004674
label: protein serine/threonine kinase activity
- id: GO:0004707
label: MAP kinase activity
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0005524
label: ATP binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: >-
MAPK1 binds ATP as the phosphoryl donor for kinase catalysis.
action: ACCEPT
reason: >-
ATP binding is integral to the active-site chemistry of ERK2 kinase activity.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0005769
label: early endosome
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This early endosome annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the early endosome location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005770
label: late endosome
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This late endosome annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the late endosome location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005794
label: Golgi apparatus
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This Golgi apparatus annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the Golgi apparatus location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005813
label: centrosome
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
This centrosome annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the centrosome location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005819
label: spindle
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
This spindle annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the spindle location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005901
label: caveola
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: >-
This caveola annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the caveola location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005925
label: focal adhesion
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
This focal adhesion annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the focal adhesion location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000108
review:
summary: >-
MAPK1 can affect transcriptional programs through downstream substrates, but broad
regulation of RNA polymerase II transcription overstates the direct function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The direct MAPK1 function is kinase activity and ERK/MAPK cascade signaling; broad
transcriptional regulation should not be inferred from pathway membership alone.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0007173
label: epidermal growth factor receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0010759
label: positive regulation of macrophage chemotaxis
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0032206
label: positive regulation of telomere maintenance
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
Positive regulation of telomere maintenance is inferred from a high-throughput RNAi
telomerase screen (PMID:21531765) plus electronic annotation.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This is a high-throughput screen-derived, indirect pathway outcome rather than a direct
MAPK1 function; it should not be elevated to a core ERK2 annotation without direct
mechanistic evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0032872
label: regulation of stress-activated MAPK cascade
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This automated annotation places canonical ERK2 in a stress-activated
MAPK cascade context.
action: MARK_AS_OVER_ANNOTATED
reason: >-
GO:0032872 is a stress-activated MAPK cascade term associated with
JNK/p38 signaling, whereas MAPK1/ERK2 is curated here as the canonical
ERK/MAPK cascade kinase. The automated inference overstates the evidence.
- term:
id: GO:0034198
label: cellular response to amino acid starvation
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is an amino-acid-starvation response annotation linked to ERK signaling
context.
action: KEEP_AS_NON_CORE
reason: >-
The starvation-response annotation may be retained as non-core where the source
evidence supports this context, but it should not be treated as the core conserved
MAPK1 function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0045202
label: synapse
evidence_type: IEA
original_reference_id: GO_REF:0000108
review:
summary: >-
This synapse annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the synapse location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0051403
label: stress-activated MAPK cascade
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This automated annotation places canonical ERK2 in the stress-activated MAPK
cascade.
action: MARK_AS_OVER_ANNOTATED
reason: >-
GO:0051403 refers to stress-activated MAPK cascade biology associated with JNK/p38
signaling, not the canonical ERK1/ERK2 cascade. The automated inference should not
be retained as a valid non-core MAPK1 annotation.
- term:
id: GO:0051493
label: regulation of cytoskeleton organization
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process (regulation of cytoskeleton organization)
linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0061514
label: interleukin-34-mediated signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0070371
label: ERK1 and ERK2 cascade
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
action: ACCEPT
reason: >-
ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than
generic signaling process terms.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0070849
label: response to epidermal growth factor
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0072584
label: caveolin-mediated endocytosis
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to
ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0090170
label: regulation of Golgi inheritance
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process (regulation of Golgi inheritance) linked
to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0097542
label: ciliary tip
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This ciliary tip annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the ciliary tip location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0106310
label: protein serine kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000116
review:
summary: >-
MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete
for ERK2.
action: MODIFY
reason: >-
ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707
better capture the supported activity than a serine-only activity term.
proposed_replacement_terms:
- id: GO:0004674
label: protein serine/threonine kinase activity
- id: GO:0004707
label: MAP kinase activity
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0120041
label: positive regulation of macrophage proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:2000641
label: regulation of early endosome to late endosome transport
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
This is a context-dependent downstream process (regulation of early endosome to late
endosome transport) linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10415025
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:10415025; ERK2 has many reported interacting partners. ERK2 partner
recognition is mediated structurally by the docking groove (D-recruitment site),
which binds short linear D-motifs in substrates and regulators; this is directly
illustrated by ERK2 crystal structures with bound D-motif peptides (PDB 2Y9Q, 3TEI,
4FMQ) that define docking-groove binding specificity (PMID:23047924).
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- reference_id: PMID:23047924
supporting_text: >-
Mitogen-activated protein kinases (MAPKs) have a docking groove that interacts
with linear "docking" motifs in binding partners.
- reference_id: PMID:23047924
supporting_text: >-
Crystal structures of four complexes of MAPKs with docking peptides ... revealed
that the regions located between consensus positions in the docking motifs showed
conformational diversity.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10601328
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:10601328; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12592337
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:12592337; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12840032
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:12840032; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15713638
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:15713638; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16038800
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:16038800; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16286470
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:16286470; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16288922
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:16288922; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17255944
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:17255944; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17255949
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:17255949; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18060821
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:18060821; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18084305
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:18084305; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18463290
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:18463290; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18616943
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:18616943; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19494114
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:19494114; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21826244
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:21826244; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21908610
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:21908610; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21988832
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:21988832; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22521293
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:22521293; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23241949
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23241949; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23455922
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23455922; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23519423
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23519423; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23560844
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23560844; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23575685
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23575685; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23584453
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23584453; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23602568
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23602568; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25241761
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:25241761; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25852190
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:25852190; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26267535
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:26267535; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26733474
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:26733474; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27880917
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:27880917; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:29997244
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:29997244; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31980649
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:31980649; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:32296183; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32707033
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:32707033; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32814053
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:32814053; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:33961781; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:34591642
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:34591642; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:35271311
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:35271311; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:38884001
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:38884001; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:40205054
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:40205054; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9632734
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:9632734; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9788880
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:9788880; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:16627622
review:
summary: >-
MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by
PMID:16627622.
action: KEEP_AS_NON_CORE
reason: >-
ERK2 dimerization is a documented property relevant to its cytoplasmic retention and
scaffold interactions, but it is a regulatory/structural property rather than the core
catalytic MAP kinase function.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IPI
original_reference_id: PMID:26267534
review:
summary: >-
MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by
PMID:26267534.
action: KEEP_AS_NON_CORE
reason: >-
ERK2 dimerization is a documented property relevant to its cytoplasmic retention and
scaffold interactions, but it is a regulatory/structural property rather than the core
catalytic MAP kinase function.
- term:
id: GO:0001784
label: phosphotyrosine residue binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This term assigns phosphotyrosine residue binding to ERK2.
action: MARK_AS_OVER_ANNOTATED
reason: >-
ERK2 substrate and partner recognition is mediated by D-domain/KIM and DEF/FXFP docking
motifs rather than by a dedicated phosphotyrosine-binding module; this automated
assignment is not supported as a core ERK2 molecular function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0005739
label: mitochondrion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This mitochondrion annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the mitochondrion location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005829
label: cytosol
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
action: ACCEPT
reason: >-
Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in
quiescent cells before stimulus-dependent nuclear accumulation.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0008286
label: insulin receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0008353
label: RNA polymerase II CTD heptapeptide repeat kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2.
action: MARK_AS_OVER_ANNOTATED
reason: >-
ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro
motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function
and this ISS/IEA assignment overstates substrate specificity. The supported catalytic
terms are MAP kinase activity and protein serine/threonine kinase activity.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like
other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the
relevant phosphoryl donor in vitro.
- term:
id: GO:0014044
label: Schwann cell development
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0016301
label: kinase activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1 is a kinase, but this term is too broad for ERK2.
action: MODIFY
reason: >-
The broad kinase activity annotation should use the more informative
serine/threonine MAP kinase terms.
proposed_replacement_terms:
- id: GO:0004674
label: protein serine/threonine kinase activity
- id: GO:0004707
label: MAP kinase activity
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0019902
label: phosphatase binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3.
action: KEEP_AS_NON_CORE
reason: >-
Phosphatase binding is a supported regulatory interaction, but it is not the
primary catalytic function of MAPK1.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can
dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or
KIM abolishes cytoplasmic anchoring.
- term:
id: GO:0031143
label: pseudopodium
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This pseudopodium annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the pseudopodium location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0035094
label: response to nicotine
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This is a context-dependent downstream process (response to nicotine) linked to ERK
signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0038133
label: ERBB2-ERBB3 signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0042552
label: myelination
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0042802
label: identical protein binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1/ERK2 self-associates (homodimerizes); identical protein binding is supported by
GO_REF:0000107.
action: KEEP_AS_NON_CORE
reason: >-
ERK2 dimerization is a documented property relevant to its cytoplasmic retention and
scaffold interactions, but it is a regulatory/structural property rather than the core
catalytic MAP kinase function.
- term:
id: GO:0043415
label: positive regulation of skeletal muscle tissue regeneration
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0048009
label: insulin-like growth factor receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0150078
label: positive regulation of neuroinflammatory response
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:22451653
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
action: ACCEPT
reason: >-
Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in
quiescent cells before stimulus-dependent nuclear accumulation.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0043415
label: positive regulation of skeletal muscle tissue regeneration
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0106310
label: protein serine kinase activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
MAPK1 can phosphorylate serine residues, but the serine-only term is incomplete
for ERK2.
action: MODIFY
reason: >-
ERK2 is a proline-directed serine/threonine MAP kinase; GO:0004674 and GO:0004707
better capture the supported activity than a serine-only activity term.
proposed_replacement_terms:
- id: GO:0004674
label: protein serine/threonine kinase activity
- id: GO:0004707
label: MAP kinase activity
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:35831023
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0045880
label: positive regulation of smoothened signaling pathway
evidence_type: IDA
original_reference_id: PMID:35831023
review:
summary: >-
ERK2 phosphorylation of GLI1 links MAPK1 to Smoothened/Hedgehog pathway
output in this specific context.
action: KEEP_AS_NON_CORE
reason: >-
This is a supported pathway-specific downstream role from PMID:35831023,
but the core MAPK1 function remains ERK2 serine/threonine MAP kinase
activity in the ERK/MAPK cascade.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent
nuclear accumulation of ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
action: ACCEPT
reason: >-
Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in
quiescent cells before stimulus-dependent nuclear accumulation.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: TAS
original_reference_id: Reactome:R-HSA-111898
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: TAS
original_reference_id: Reactome:R-HSA-445079
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:38503280
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0070371
label: ERK1 and ERK2 cascade
evidence_type: IDA
original_reference_id: PMID:15850461
review:
summary: >-
MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
action: ACCEPT
reason: >-
ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than
generic signaling process terms.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0150078
label: positive regulation of neuroinflammatory response
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This is a distal or cell-type-specific outcome rather than a core MAPK1 function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The available synthesis supports ERK/MAPK cascade membership as core, but warns
against promoting broad developmental or disease-associated outcomes to core MAPK1
functions without direct MAPK1-specific evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: IDA
original_reference_id: PMID:38503280
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0070098
label: chemokine-mediated signaling pathway
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This is a context-dependent downstream process (chemokine-mediated signaling pathway)
linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IDA
original_reference_id: PMID:15850461
review:
summary: >-
MAPK1/ERK2 functions in the canonical MAPK cascade.
action: ACCEPT
reason: >-
MAPK cascade membership is a core biological process for ERK2, downstream of
Ras-RAF-MEK signaling.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0061514
label: interleukin-34-mediated signaling pathway
evidence_type: IGI
original_reference_id: PMID:26754294
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IDA
original_reference_id: PMID:24854121
review:
summary: >-
MAPK1/ERK2 functions in the canonical MAPK cascade.
action: ACCEPT
reason: >-
MAPK cascade membership is a core biological process for ERK2, downstream of
Ras-RAF-MEK signaling.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0007173
label: epidermal growth factor receptor signaling pathway
evidence_type: IDA
original_reference_id: PMID:24854121
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26942675
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:26942675; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0032206
label: positive regulation of telomere maintenance
evidence_type: IMP
original_reference_id: PMID:21531765
review:
summary: >-
Positive regulation of telomere maintenance is inferred from a high-throughput RNAi
telomerase screen (PMID:21531765) plus electronic annotation.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This is a high-throughput screen-derived, indirect pathway outcome rather than a direct
MAPK1 function; it should not be elevated to a core ERK2 annotation without direct
mechanistic evidence.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0045542
label: positive regulation of cholesterol biosynthetic process
evidence_type: IDA
original_reference_id: PMID:38503280
review:
summary: >-
Positive regulation of cholesterol biosynthesis is an ERK2-linked downstream metabolic
outcome reported in PMID:38503280.
action: KEEP_AS_NON_CORE
reason: >-
This is a context-dependent downstream metabolic process mediated via ERK signaling
rather than a core conserved MAPK1 molecular function; retained as non-core.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11489891
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:11489891; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32721402
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:32721402; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:32721402
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:32721402
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32051553
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:32051553; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:7588608
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0010759
label: positive regulation of macrophage chemotaxis
evidence_type: IGI
original_reference_id: PMID:26754294
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0120041
label: positive regulation of macrophage proliferation
evidence_type: IGI
original_reference_id: PMID:26754294
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15133037
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:15133037; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9652816
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005788
label: endoplasmic reticulum lumen
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9636296
review:
summary: >-
This is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization; secretory or granule-lumen locations are likely pathway-context
over-annotations for soluble ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct
localization evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9635739
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:26996940
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This plasma membrane annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the plasma membrane location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005901
label: caveola
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This caveola annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the caveola location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0007611
label: learning or memory
evidence_type: NAS
original_reference_id: PMID:11404397
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0035094
label: response to nicotine
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This is a context-dependent downstream process (response to nicotine) linked to ERK
signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0034198
label: cellular response to amino acid starvation
evidence_type: IDA
original_reference_id: PMID:11096076
review:
summary: >-
This is an amino-acid-starvation response annotation linked to ERK signaling
context.
action: KEEP_AS_NON_CORE
reason: >-
The starvation-response annotation may be retained as non-core where the source
evidence supports this context, but it should not be treated as the core conserved
MAPK1 function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0051403
label: stress-activated MAPK cascade
evidence_type: IDA
original_reference_id: PMID:11096076
review:
summary: >-
This stress-activated MAPK cascade annotation on MAPK1/ERK2 derives from a paper
focused on ASK1/JNK stress signaling, not the canonical ERK cascade.
action: MARK_AS_OVER_ANNOTATED
reason: >-
GO:0051403 (stress-activated MAPK cascade) is associated with JNK/p38 (SAPK)
signaling. PMID:11096076 concerns the Gln-dependent interaction of glutaminyl-tRNA
synthetase with apoptosis signal-regulating kinase 1 (ASK1) and JNK/SAPK, not
ERK2; assigning the stress-activated MAPK cascade to canonical ERK2 over-annotates
MAPK1.
supported_by:
- reference_id: PMID:11096076
supporting_text: >-
signal-regulating kinase 1 (ASK1) and c-Jun N-terminal kinase (JNK; also known
as stress-activated protein kinase (SAPK)) in Gln-deprived cells
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798751
review:
summary: >-
This is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization; secretory or granule-lumen locations are likely pathway-context
over-annotations for soluble ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct
localization evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6800434
review:
summary: >-
This is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization; secretory or granule-lumen locations are likely pathway-context
over-annotations for soluble ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct
localization evidence exists for MAPK1 itself in that context.
- term:
id: GO:0035578
label: azurophil granule lumen
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798751
review:
summary: >-
This is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization; secretory or granule-lumen locations are likely pathway-context
over-annotations for soluble ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct
localization evidence exists for MAPK1 itself in that context.
- term:
id: GO:1904813
label: ficolin-1-rich granule lumen
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6800434
review:
summary: >-
This is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization; secretory or granule-lumen locations are likely pathway-context
over-annotations for soluble ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct
localization evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24735981
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:24735981; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0006468
label: protein phosphorylation
evidence_type: IDA
original_reference_id: PMID:23184662
review:
summary: >-
MAPK1 directly phosphorylates protein substrates.
action: ACCEPT
reason: >-
Protein phosphorylation is the direct biochemical output of the MAPK1 kinase
activity.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family
and other transcription-factor substrates in vitro and in cells; docking
motifs/exosites help determine substrate recognition.
- term:
id: GO:0005634
label: nucleus
evidence_type: HDA
original_reference_id: PMID:16791210
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: HDA
original_reference_id: PMID:16791210
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0072686
label: mitotic spindle
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This mitotic spindle annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the mitotic spindle location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23847209
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:23847209; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-198746
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-198756
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-199959
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-203797
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3132737
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3857329
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-450325
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674387
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5675373
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9032751
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610166
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9632910
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9725030
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9765960
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-NUL-9009236
review:
summary: >-
MAPK1/ERK2 can accumulate in the nuclear compartment after stimulation; this is one of
several Reactome reaction-level annotations placing ERK2 in the nucleoplasm.
action: ACCEPT
reason: >-
Nucleoplasmic localization is compatible with the supported stimulus-dependent nuclear
accumulation of ERK2. The repeated Reactome nucleoplasm rows are group-accepted as
consistent with this core localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-109858
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-109862
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-109864
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-111898
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1168459
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2029469
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3371531
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-418158
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-418163
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-418170
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-418176
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-418200
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-445079
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5654560
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5654562
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5654565
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5654566
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5672972
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5672973
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5672978
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5672980
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674130
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674132
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674366
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674373
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674385
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674387
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5674496
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5675194
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5675198
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5675206
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5675376
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802910
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802911
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802912
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802914
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802918
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802919
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802921
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802922
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802925
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802926
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802932
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802933
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802934
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802935
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802942
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6802943
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6803227
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6803230
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6803233
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6803234
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6811454
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6811472
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610152
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610153
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610154
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610156
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9610166
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9626832
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9627089
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9632910
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9635743
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9636296
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9652165
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9656209
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9656211
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9656214
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9656215
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9657599
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9657603
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9657606
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9657608
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9731111
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9732753
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9734547
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9824582
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9824977
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9825759
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9845033
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-9619973
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment; this is one of many
Reactome reaction-level annotations placing ERK2 in the cytosol.
action: ACCEPT
reason: >-
Cytosolic localization is a core supported localization for ERK2, which is predominantly
cytoplasmic in quiescent cells before stimulus-dependent nuclear accumulation. The
numerous Reactome cytosol rows are group-accepted as consistent with this core
localization.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the nucleus after
activation by certain stimuli; nuclear ERK phosphorylates nuclear targets and
contributes to induced gene expression programs.
- term:
id: GO:0038127
label: ERBB signaling pathway
evidence_type: IDA
original_reference_id: PMID:15133037
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:18794356
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18794356
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:18794356; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:18794356
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:18794356
review:
summary: >-
MAPK1/ERK2 is cytoplasmic in quiescent cells.
action: ACCEPT
reason: >-
Cytoplasmic localization is a core supported localization for ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0070849
label: response to epidermal growth factor
evidence_type: IDA
original_reference_id: PMID:18794356
review:
summary: >-
MAPK1 is activated in receptor and growth-factor signaling contexts, but these are
stimulus-specific pathway contexts rather than the core conserved ERK2 function.
action: KEEP_AS_NON_CORE
reason: >-
Growth-factor and receptor-specific signaling annotations can be retained as
non-core contexts; the core MAPK1 process is the intracellular ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22253824
review:
summary: >-
This is a generic protein-binding (GO:0005515) interaction annotation for MAPK1/ERK2
from PMID:22253824; ERK2 has many reported interacting partners.
action: KEEP_AS_NON_CORE
reason: >-
The generic protein binding term is uninformative for a multi-partner kinase like ERK2
and is retained only as a non-core interaction record. ERK partner recognition is
motif/exosite-driven (KIM/D-domain, DEF/FXFP) and where a specific docking, substrate,
scaffold, or phosphatase interaction is established a more informative molecular
function term should be used instead of bare protein binding.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Because docking is motif-driven and structurally/biochemically dissectable, using only
“protein binding” is typically uninformative and risks over-annotation. Additionally,
yeast two-hybrid and peptide-based assays may capture indirect interactions or partial
interfaces, so direct “binding” annotations should be limited to partners with
orthogonal support.
- term:
id: GO:0004674
label: protein serine/threonine kinase activity
evidence_type: IDA
original_reference_id: PMID:15850461
review:
summary: >-
MAPK1/ERK2 is an ATP-dependent protein serine/threonine kinase.
action: ACCEPT
reason: >-
Serine/threonine protein kinase activity is a core molecular function of MAPK1;
the more specific MAP kinase activity term should also be retained where present.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- term:
id: GO:0005634
label: nucleus
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
MAPK1/ERK2 localizes to the nucleus after stimulation.
action: ACCEPT
reason: >-
Nuclear localization is supported, but should be interpreted as stimulus-dependent
rather than constitutive.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
**Do not infer “nuclear” localization from phospho-ERK alone.** Nuclear
accumulation can be partially uncoupled from TEY phosphorylation and depends on
docking interactions and anchors.
- term:
id: GO:0005739
label: mitochondrion
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This mitochondrion annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the mitochondrion location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005769
label: early endosome
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This early endosome annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the early endosome location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005770
label: late endosome
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This late endosome annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the late endosome location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005794
label: Golgi apparatus
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This Golgi apparatus annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the Golgi apparatus location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
MAPK1/ERK2 is present in the cytosolic/cytoplasmic compartment.
action: ACCEPT
reason: >-
Cytosolic localization is consistent with ERK2 being predominantly cytoplasmic in
quiescent cells before stimulus-dependent nuclear accumulation.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK is predominantly cytoplasmic in quiescent cells and accumulates in the
nucleus after activation by certain stimuli; nuclear ERK phosphorylates nuclear
targets and contributes to induced gene expression programs.
- term:
id: GO:0005856
label: cytoskeleton
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This cytoskeleton annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the cytoskeleton location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005901
label: caveola
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This caveola annotation is not a supported core MAPK1 localization in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the caveola location is a context-/pathway-specific or high-
throughput-derived assignment that should not be promoted to a core ERK2 localization
without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0005925
label: focal adhesion
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This focal adhesion annotation is not a supported core MAPK1 localization in this
review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon synthesis supports cytoplasmic/cytosolic and stimulus-dependent nuclear
localization as core; the focal adhesion location is a context-/pathway-specific or
high-throughput-derived assignment that should not be promoted to a core ERK2
localization without direct MAPK1-specific evidence in that compartment.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Prefer cytoplasm/nucleus over highly specific compartments unless direct localization
evidence exists for MAPK1 itself in that context.
- term:
id: GO:0032872
label: regulation of stress-activated MAPK cascade
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This TAS annotation assigns regulation of the stress-activated MAPK cascade to
MAPK1/ERK2, citing a general ERK compartmentalization review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
GO:0032872 (regulation of stress-activated MAPK cascade) is associated with JNK/p38
(SAPK) biology rather than the canonical ERK cascade. PMID:19565474 is a review of
ERK signaling across subcellular compartments and does not establish ERK2 as a
regulator of the stress-activated (JNK/p38) MAPK cascade; this is an over-annotation
for canonical ERK2, consistent with the corresponding IEA row.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0051493
label: regulation of cytoskeleton organization
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This is a context-dependent downstream process (regulation of cytoskeleton organization)
linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0072584
label: caveolin-mediated endocytosis
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This is a context-dependent downstream process (caveolin-mediated endocytosis) linked to
ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0090170
label: regulation of Golgi inheritance
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This is a context-dependent downstream process (regulation of Golgi inheritance) linked
to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:2000641
label: regulation of early endosome to late endosome transport
evidence_type: TAS
original_reference_id: PMID:19565474
review:
summary: >-
This is a context-dependent downstream process (regulation of early endosome to late
endosome transport) linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a specific
context, but it should not be treated as the core conserved MAPK1 function, which is
ERK2 MAP kinase activity in the ERK/MAPK cascade.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease contexts,
but these are typically emergent outcomes of the pathway rather than direct MAPK1
enzymatic functions.
- term:
id: GO:0010800
label: positive regulation of peptidyl-threonine phosphorylation
evidence_type: IDA
original_reference_id: PMID:16314496
review:
summary: >-
MAPK1 can increase phosphorylation of downstream threonine-containing protein
substrates.
action: KEEP_AS_NON_CORE
reason: >-
The term is consistent with ERK2 substrate phosphorylation, but it is less central
than the direct kinase activity and ERK/MAPK cascade annotations.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 directly phosphorylates defined downstream targets such as Elk-1/ETS-family
and other transcription-factor substrates in vitro and in cells; docking
motifs/exosites help determine substrate recognition.
- term:
id: GO:0070371
label: ERK1 and ERK2 cascade
evidence_type: IDA
original_reference_id: PMID:16314496
review:
summary: >-
MAPK1/ERK2 is a central component of the ERK1 and ERK2 cascade.
action: ACCEPT
reason: >-
ERK1 and ERK2 cascade is a core pathway term for MAPK1 and is more specific than
generic signaling process terms.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0019902
label: phosphatase binding
evidence_type: IPI
original_reference_id: PMID:19494114
review:
summary: >-
MAPK1 binds MAP kinase phosphatases such as DUSP6/MKP-3.
action: KEEP_AS_NON_CORE
reason: >-
Phosphatase binding is a supported regulatory interaction, but it is not the
primary catalytic function of MAPK1.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
DUSP6/MKP-3 as cytoplasmic tether:** MKP-3/DUSP6 binds ERK2 and can
dephosphorylate and tether inactive ERK2 in the cytoplasm; mutating MKP-3 NES or
KIM abolishes cytoplasmic anchoring.
- term:
id: GO:0008353
label: RNA polymerase II CTD heptapeptide repeat kinase activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
This term assigns RNA polymerase II CTD heptapeptide repeat kinase activity to ERK2.
action: MARK_AS_OVER_ANNOTATED
reason: >-
ERK2 is a proline-directed Ser/Thr MAP kinase; while it phosphorylates Ser/Thr-Pro
motifs, dedicated RNA Pol II CTD kinase activity is not a core supported ERK2 function
and this ISS/IEA assignment overstates substrate specificity. The supported catalytic
terms are MAP kinase activity and protein serine/threonine kinase activity.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro motifs; like
other protein kinases it binds ATP in an active-site cleft, with MgATP2− serving as the
relevant phosphoryl donor in vitro.
- term:
id: GO:0004707
label: MAP kinase activity
evidence_type: TAS
original_reference_id: PMID:10706854
review:
summary: >-
MAPK1/ERK2 has MAP kinase activity.
action: ACCEPT
reason: >-
MAP kinase activity is the most specific core catalytic function for MAPK1/ERK2.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- term:
id: GO:0006915
label: apoptotic process
evidence_type: TAS
original_reference_id: PMID:10958679
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0006935
label: chemotaxis
evidence_type: TAS
original_reference_id: PMID:10706854
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
- term:
id: GO:0007165
label: signal transduction
evidence_type: TAS
original_reference_id: PMID:1540184
review:
summary: >-
MAPK1 participates in signal transduction, but the generic term should be replaced
by more specific intracellular MAPK/ERK signaling terms.
action: MODIFY
reason: >-
Generic signal transduction underspecifies MAPK1; intracellular signal
transduction and ERK/MAPK cascade terms capture the supported biology more
accurately.
proposed_replacement_terms:
- id: GO:0035556
label: intracellular signal transduction
- id: GO:0070371
label: ERK1 and ERK2 cascade
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
annotate ERK2 to **MAPK cascade / ERK1 and ERK2 cascade** and **intracellular
signal transduction**; optionally include **response to growth factor** where
the evidence is directly about upstream stimuli triggering ERK
activation/translocation rather than downstream phenotypes.
- term:
id: GO:0007268
label: chemical synaptic transmission
evidence_type: TAS
original_reference_id: PMID:10051431
review:
summary: >-
This is a context-dependent downstream process linked to ERK signaling.
action: KEEP_AS_NON_CORE
reason: >-
The process may be retained as non-core where the source evidence supports a
specific context, but it should not be treated as the core conserved MAPK1
function.
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
Many sources link ERK signaling to proliferation/differentiation and disease
contexts, but these are typically emergent outcomes of the pathway rather than
direct MAPK1 enzymatic functions.
references:
- id: GO_REF:0000002
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000024
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000033
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000044
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000052
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000107
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000108
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000116
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000117
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000120
title: 'TODO: Fetch title'
findings: []
- id: PMID:10051431
title: Regulation of extracellular-signal regulated kinase and c-Jun N-terminal kinase by G-protein-linked muscarinic acetylcholine
receptors.
findings: []
- id: PMID:10415025
title: Direct suppression of TCR-mediated activation of extracellular signal-regulated kinase by leukocyte protein tyrosine
phosphatase, a tyrosine-specific phosphatase.
findings: []
- id: PMID:10601328
title: A novel regulatory mechanism of MAP kinases activation and nuclear translocation mediated by PKA and the PTP-SL tyrosine
phosphatase.
findings: []
- id: PMID:10706854
title: Eotaxin induces degranulation and chemotaxis of eosinophils through the activation of ERK2 and p38 mitogen-activated
protein kinases.
findings: []
- id: PMID:10958679
title: Hsp72-mediated suppression of c-Jun N-terminal kinase is implicated in development of tolerance to caspase-independent
cell death.
findings: []
- id: PMID:11096076
title: Glutamine-dependent antiapoptotic interaction of human glutaminyl-tRNA synthetase with apoptosis signal-regulating
kinase 1.
findings: []
- id: PMID:11404397
title: 'Beta-amyloid activates the mitogen-activated protein kinase cascade via hippocampal alpha7 nicotinic acetylcholine receptors: In vitro and in vivo mechanisms related to Alzheimer''s disease.'
findings: []
- id: PMID:11489891
title: MKP-7, a novel mitogen-activated protein kinase phosphatase, functions as a shuttle protein.
findings: []
- id: PMID:12592337
title: The protein tyrosine phosphatase HePTP regulates nuclear translocation of ERK2 and can modulate megakaryocytic differentiation
of K562 cells.
findings: []
- id: PMID:12840032
title: Constitutive induction of p-Erk1/2 accompanied by reduced activities of protein phosphatases 1 and 2A and MKP3 due
to reactive oxygen species during cellular senescence.
findings: []
- id: PMID:15133037
title: The major vault protein is a novel substrate for the tyrosine phosphatase SHP-2 and scaffold protein in epidermal
growth factor signaling.
findings: []
- id: PMID:1540184
title: 'Extracellular signal-regulated kinases in T cells: characterization of human ERK1 and ERK2 cDNAs.'
findings: []
- id: PMID:15713638
title: Specific inactivation and nuclear anchoring of extracellular signal-regulated kinase 2 by the inducible dual-specificity
protein phosphatase DUSP5.
findings: []
- id: PMID:15850461
title: The phosphorylation of CapZ-interacting protein (CapZIP) by stress-activated protein kinases triggers its dissociation
from CapZ.
findings: []
- id: PMID:16038800
title: Conditional expression of MAP kinase phosphatase-2 protects against genotoxic stress-induced apoptosis by binding
and selective dephosphorylation of nuclear activated c-jun N-terminal kinase.
findings: []
- id: PMID:16286470
title: Cooperation of ERK and SCFSkp2 for MKP-1 destruction provides a positive feedback regulation of proliferating signaling.
findings: []
- id: PMID:16288922
title: New insights into the catalytic activation of the MAPK phosphatase PAC-1 induced by its substrate MAPK ERK2 binding.
findings: []
- id: PMID:16314496
title: Activation of TRAP/mediator subunit TRAP220/Med1 is regulated by mitogen-activated protein kinase-dependent phosphorylation.
findings: []
- id: PMID:16627622
title: Direct phosphorylation and regulation of poly(ADP-ribose) polymerase-1 by extracellular signal-regulated kinases
1/2.
findings: []
- id: PMID:16791210
title: Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins.
findings: []
- id: PMID:17255944
title: A MAPK docking site is critical for downregulation of Capicua by Torso and EGFR RTK signaling.
findings: []
- id: PMID:17255949
title: Mxi2 promotes stimulus-independent ERK nuclear translocation.
findings: []
- id: PMID:18060821
title: Structural insights into the enzymatic mechanism of the pathogenic MAPK phosphothreonine lyase.
findings: []
- id: PMID:18084305
title: Structural basis for the catalytic mechanism of phosphothreonine lyase.
findings: []
- id: PMID:18463290
title: Human biliverdin reductase is an ERK activator; hBVR is an ERK nuclear transporter and is required for MAPK signaling.
findings: []
- id: PMID:18616943
title: Phosphorylation of U24 from Human Herpes Virus type 6 (HHV-6) and its potential role in mimicking myelin basic protein
(MBP) in multiple sclerosis.
findings: []
- id: PMID:18794356
title: Extracellular signal-regulated kinase 2 (ERK2) phosphorylation sites and docking domain on the nuclear pore complex
protein Tpr cooperatively regulate ERK2-Tpr interaction.
findings: []
- id: PMID:19494114
title: Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhibits the RAS pathway by direct dephosphorylation of ERK1/2
kinases.
findings: []
- id: PMID:19565474
title: The ERK signaling cascade--views from different subcellular compartments.
findings: []
- id: PMID:21531765
title: High-throughput RNAi screening reveals novel regulators of telomerase.
findings: []
- id: PMID:21826244
title: TRAPPC4-ERK2 interaction activates ERK1/2, modulates its nuclear localization and regulates proliferation and apoptosis
of colorectal cancer cells.
findings: []
- id: PMID:21908610
title: Phosphorylation of the kinase interaction motif in mitogen-activated protein (MAP) kinase phosphatase-4 mediates
cross-talk between protein kinase A and MAP kinase signaling pathways.
findings: []
- id: PMID:21988832
title: Toward an understanding of the protein interaction network of the human liver.
findings: []
- id: PMID:22253824
title: Localization of nucleoporin Tpr to the nuclear pore complex is essential for Tpr mediated regulation of the export
of unspliced RNA.
findings: []
- id: PMID:22451653
title: Siglec-15 protein regulates formation of functional osteoclasts in concert with DNAX-activating protein of 12 kDa
(DAP12).
findings: []
- id: PMID:22521293
title: ETS-dependent p16INK4a and p21waf1/cip1 gene expression upon endothelin-1 stimulation in malignant versus and non-malignant
proximal tubule cells.
findings: []
- id: PMID:23047924
title: Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove.
findings: []
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Comparative crystallographic study (ERK2 structures PDB 2Y9Q/3TEI/4FMQ with
bound D-motif peptides) defining the structural basis of MAPK docking-groove specificity
for short linear D-motifs.
- id: PMID:23184662
title: Phosphorylation of eukaryotic elongation factor 2 (eEF2) by cyclin A-cyclin-dependent kinase 2 regulates its inhibition
by eEF2 kinase.
findings: []
- id: PMID:23241949
title: MEK1 inactivates Myt1 to regulate Golgi membrane fragmentation and mitotic entry in mammalian cells.
findings: []
- id: PMID:23455922
title: Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS.
findings: []
- id: PMID:23519423
title: 'Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase.'
findings: []
- id: PMID:23560844
title: Metal-dependent protein phosphatase 1A functions as an extracellular signal-regulated kinase phosphatase.
findings: []
- id: PMID:23575685
title: Structure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK.
findings: []
- id: PMID:23584453
title: Interaction with Shc prevents aberrant Erk activation in the absence of extracellular stimuli.
findings: []
- id: PMID:23602568
title: The protein interaction landscape of the human CMGC kinase group.
findings: []
- id: PMID:23847209
title: Pseudophosphatase STYX modulates cell-fate decisions and cell migration by spatiotemporal regulation of ERK1/2.
findings: []
- id: PMID:24735981
title: MFAP3L activation promotes colorectal cancer cell invasion and metastasis.
findings: []
- id: PMID:24854121
title: Endophilin-1 regulates blood-brain barrier permeability by controlling ZO-1 and occludin expression via the EGFR-ERK1/2
pathway.
findings: []
- id: PMID:25241761
title: Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a
pathway network.
findings: []
- id: PMID:25852190
title: Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination
therapy.
findings: []
- id: PMID:26267534
title: Small Molecule Inhibition of ERK Dimerization Prevents Tumorigenesis by RAS-ERK Pathway Oncogenes.
findings: []
- id: PMID:26267535
title: ERK2-Dependent Phosphorylation of CSN6 Is Critical in Colorectal Cancer Development.
findings: []
- id: PMID:26733474
title: Identification of allosteric ERK2 inhibitors through in silico biased screening and competitive binding assay.
findings: []
- id: PMID:26754294
title: miR-28-5p-IL-34-macrophage feedback loop modulates hepatocellular carcinoma metastasis.
findings: []
- id: PMID:26942675
title: Mitochondria-Translocated PGK1 Functions as a Protein Kinase to Coordinate Glycolysis and the TCA Cycle in Tumorigenesis.
findings: []
- id: PMID:26996940
title: Regulation of Microtubule Assembly by Tau and not by Pin1.
findings: []
- id: PMID:27880917
title: Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.
findings: []
- id: PMID:29997244
title: 'LuTHy: a double-readout bioluminescence-based two-hybrid technology for quantitative mapping of protein-protein
interactions in mammalian cells.'
findings: []
- id: PMID:31980649
title: Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS(G13D).
findings: []
- id: PMID:32051553
title: The EGFR-ZNF263 signaling axis silences SIX3 in glioblastoma epigenetically.
findings: []
- id: PMID:32296183
title: A reference map of the human binary protein interactome.
findings: []
- id: PMID:32707033
title: Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases.
findings: []
- id: PMID:32721402
title: Enhanced MAPK1 Function Causes a Neurodevelopmental Disorder within the RASopathy Clinical Spectrum.
findings: []
- id: PMID:32814053
title: Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation
in Affected Brains.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
findings: []
- id: PMID:34591642
title: A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity.
findings: []
- id: PMID:35271311
title: 'OpenCell: Endogenous tagging for the cartography of human cellular organization.'
findings: []
- id: PMID:35831023
title: ERK2 MAP kinase regulates SUFU binding by multisite phosphorylation of GLI1.
findings: []
- id: PMID:38503280
title: A gut-derived hormone regulates cholesterol metabolism.
findings: []
- id: PMID:38884001
title: Mapping adipocyte interactome networks by HaloTag-enrichment-mass spectrometry.
findings: []
- id: PMID:40205054
title: Multimodal cell maps as a foundation for structural and functional genomics.
findings: []
- id: PMID:7588608
title: 'ERF: an ETS domain protein with strong transcriptional repressor activity, can suppress ets-associated tumorigenesis
and is regulated by phosphorylation during cell cycle and mitogenic stimulation.'
findings: []
- id: PMID:9632734
title: Activation of extracellular signal-regulated kinase 2 by a novel Abl-binding protein, ST5.
findings: []
- id: PMID:9788880
title: 'Isolation of the human genes encoding the pyst1 and Pyst2 phosphatases: characterisation of Pyst2 as a cytosolic
dual-specificity MAP kinase phosphatase and its catalytic activation by both MAP and SAP kinases.'
findings: []
- id: Reactome:R-HSA-109858
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-109862
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-109864
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-111898
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-1168459
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-198746
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-198756
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-199959
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-2029469
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-203797
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-3132737
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-3371531
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-3857329
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-418158
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-418163
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-418170
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-418176
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-418200
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-445079
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-450325
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5654560
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5654562
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5654565
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5654566
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5672972
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5672973
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5672978
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5672980
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674130
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674132
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674366
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674373
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674385
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674387
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5674496
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5675194
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5675198
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5675206
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5675373
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-5675376
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6798751
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6800434
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802910
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802911
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802912
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802914
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802918
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802919
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802921
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802922
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802925
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802926
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802932
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802933
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802934
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802935
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802942
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6802943
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6803227
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6803230
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6803233
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6803234
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6811454
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-6811472
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9032751
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9610152
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9610153
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9610154
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9610156
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9610166
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9626832
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9627089
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9632910
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9635739
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9635743
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9636296
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9652165
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-HSA-9652816
title: 'TODO: Fetch title'
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- id: file:human/MAPK1/MAPK1-deep-research-falcon.md
title: Falcon deep research report on MAPK1
findings: []
core_functions:
- molecular_function:
id: GO:0004707
label: MAP kinase activity
description: >-
MAPK1/ERK2 is an ATP-dependent, proline-directed serine/threonine MAP
kinase. After MEK1/2-mediated activation, ERK2 phosphorylates protein
substrates and transmits canonical Ras-RAF-MEK-ERK signals to cytosolic and
nuclear targets.
directly_involved_in:
- id: GO:0070371
label: ERK1 and ERK2 cascade
- id: GO:0000165
label: MAPK cascade
- id: GO:0006468
label: protein phosphorylation
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005737
label: cytoplasm
- id: GO:0005634
label: nucleus
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers the γ-phosphate of ATP to Ser/Thr-Pro
motifs; like other protein kinases it binds ATP in an active-site cleft, with
MgATP2− serving as the relevant phosphoryl donor in vitro.
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is consistently positioned as a downstream effector in the Ras–Raf–MEK–ERK
signal transduction cascade, converting extracellular cues (including growth
factors/serum) into intracellular phosphorylation events and responses.
- molecular_function:
id: GO:0005524
label: ATP binding
description: >-
ATP binding is a core active-site function of MAPK1 because ATP/MgATP
provides the phosphoryl group used for ERK2 serine/threonine protein kinase
catalysis.
directly_involved_in:
- id: GO:0006468
label: protein phosphorylation
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005634
label: nucleus
supported_by:
- reference_id: file:human/MAPK1/MAPK1-deep-research-falcon.md
supporting_text: >-
ERK2 is a Ser/Thr MAPK that transfers phosphate from ATP/MgATP to Ser/Thr-Pro
motifs; ATP binds in the active site, with N-lobe/glycine-rich loop contributions
to nucleotide binding and catalysis.
proposed_new_terms: []
suggested_questions:
- question: >-
Which generic protein-binding annotations correspond to direct MAPK1
docking, substrate, scaffold, or phosphatase interactions that should be
curated with more specific terms?
- question: >-
Which downstream proliferation, apoptosis, migration, immune, neuronal, or
developmental annotations have direct MAPK1-specific evidence rather than
general ERK pathway membership?
suggested_experiments:
- description: >-
Prioritize source-level review of MAPK1-specific substrate phosphorylation
papers to separate direct ERK2 substrates from phosphoproteomics or
inhibitor-based pathway effects.
- description: >-
Review compartment-specific MAPK1 localization evidence with stimulus and
cell-type context, especially endosome, Golgi, mitochondrion, focal
adhesion, and caveola annotations.