RARA

UniProt ID: P10276
Organism: Homo sapiens
Review Status: INITIALIZED
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Gene Description

TODO: Add description for RARA

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000122 negative regulation of transcription by RNA polymerase II
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0004879 nuclear receptor activity
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0005634 nucleus
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0030154 cell differentiation
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0045944 positive regulation of transcription by RNA polymerase II
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0090575 RNA polymerase II transcription regulator complex
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0048384 retinoic acid receptor signaling pathway
IBA
GO_REF:0000033
PENDING
Summary: TODO: Review this GOA annotation
GO:0003677 DNA binding
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0003700 DNA-binding transcription factor activity
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0004879 nuclear receptor activity
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0005634 nucleus
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
IEA
GO_REF:0000117
PENDING
Summary: TODO: Review this GOA annotation
GO:0005737 cytoplasm
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0006355 regulation of DNA-templated transcription
IEA
GO_REF:0000002
PENDING
Summary: TODO: Review this GOA annotation
GO:0008270 zinc ion binding
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0043565 sequence-specific DNA binding
IEA
GO_REF:0000120
PENDING
Summary: TODO: Review this GOA annotation
GO:0046872 metal ion binding
IEA
GO_REF:0000043
PENDING
Summary: TODO: Review this GOA annotation
GO:0048384 retinoic acid receptor signaling pathway
IEA
GO_REF:0000002
PENDING
Summary: TODO: Review this GOA annotation
GO:1990837 sequence-specific double-stranded DNA binding
IEA
GO_REF:0000117
PENDING
Summary: TODO: Review this GOA annotation
GO:0005515 protein binding
IPI
PMID:10698945
Structure of the RXR-RAR DNA-binding complex on the retinoic...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10698945
Structure of the RXR-RAR DNA-binding complex on the retinoic acid response element DR1.
GO:0005515 protein binding
IPI
PMID:16189514
Towards a proteome-scale map of the human protein-protein in...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16189514
Towards a proteome-scale map of the human protein-protein interaction network.
GO:0005515 protein binding
IPI
PMID:16456540
P38MAPK-dependent phosphorylation and degradation of SRC-3/A...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16456540
P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1 and RARalpha-mediated transcription.
GO:0005515 protein binding
IPI
PMID:16606617
Additional sex comb-like 1 (ASXL1), in cooperation with SRC-...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16606617
2006 Apr 10. Additional sex comb-like 1 (ASXL1), in cooperation with SRC-1, acts as a ligand-dependent coactivator for retinoic acid receptor.
GO:0005515 protein binding
IPI
PMID:16769902
Phosphorylation by PKA potentiates retinoic acid receptor al...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16769902
Phosphorylation by PKA potentiates retinoic acid receptor alpha activity by means of increasing interaction with and phosphorylation by cyclin H/cdk7.
GO:0005515 protein binding
IPI
PMID:17560333
Role of the polycomb repressive complex 2 in acute promyeloc...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17560333
Role of the polycomb repressive complex 2 in acute promyelocytic leukemia.
GO:0005515 protein binding
IPI
PMID:17641689
MED25 is distinct from TRAP220/MED1 in cooperating with CBP ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17641689
Jul 19. MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation.
GO:0005515 protein binding
IPI
PMID:18048326
Identification of retinoic acid as an inhibitor of transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18048326
Identification of retinoic acid as an inhibitor of transcription factor Nrf2 through activation of retinoic acid receptor alpha.
GO:0005515 protein binding
IPI
PMID:19345331
ZNF423 is critically required for retinoic acid-induced diff...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19345331
ZNF423 is critically required for retinoic acid-induced differentiation and is a marker of neuroblastoma outcome.
GO:0005515 protein binding
IPI
PMID:19934264
Reciprocal roles of SIRT1 and SKIP in the regulation of RAR ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19934264
Nov 24. Reciprocal roles of SIRT1 and SKIP in the regulation of RAR activity: implication in the retinoic acid-induced neuronal differentiation of P19 cells.
GO:0005515 protein binding
IPI
PMID:20133701
LIM protein Ajuba functions as a nuclear receptor corepresso...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20133701
LIM protein Ajuba functions as a nuclear receptor corepressor and negatively regulates retinoic acid signaling.
GO:0005515 protein binding
IPI
PMID:20211142
An atlas of combinatorial transcriptional regulation in mous...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20211142
An atlas of combinatorial transcriptional regulation in mouse and man.
GO:0005515 protein binding
IPI
PMID:20543827
A unique secondary-structure switch controls constitutive ge...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20543827
Jun 13. A unique secondary-structure switch controls constitutive gene repression by retinoic acid receptor.
GO:0005515 protein binding
IPI
PMID:21478865
Common architecture of nuclear receptor heterodimers on DNA ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21478865
Apr 10. Common architecture of nuclear receptor heterodimers on DNA direct repeat elements with different spacings.
GO:0005515 protein binding
IPI
PMID:21516116
Next-generation sequencing to generate interactome datasets.
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21516116
Next-generation sequencing to generate interactome datasets.
GO:0005515 protein binding
IPI
PMID:21988832
Toward an understanding of the protein interaction network o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21988832
Toward an understanding of the protein interaction network of the human liver.
GO:0005515 protein binding
IPI
PMID:22056876
A retinoic acid receptor RARΞ± pool present in membrane lipid...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22056876
A retinoic acid receptor RARΞ± pool present in membrane lipid rafts forms complexes with G protein Ξ±Q to activate p38MAPK.
GO:0005515 protein binding
IPI
PMID:22351778
Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22351778
2012 Feb 17. Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-actinin 4 (ACTN4) protein mutants lose ability to activate transcription by nuclear hormone receptors.
GO:0005515 protein binding
IPI
PMID:23518351
The histone demethylase PHF8 governs retinoic acid response ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23518351
The histone demethylase PHF8 governs retinoic acid response in acute promyelocytic leukemia.
GO:0005515 protein binding
IPI
PMID:23693014
Activation of Akt pathway by transcription-independent mecha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23693014
Activation of Akt pathway by transcription-independent mechanisms of retinoic acid promotes survival and invasion in lung cancer cells.
GO:0005515 protein binding
IPI
PMID:24819975
Small ubiquitin-related modifier-1 modification regulates al...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24819975
Small ubiquitin-related modifier-1 modification regulates all-trans-retinoic acid-induced differentiation via stabilization of retinoic acid receptor Ξ±.
GO:0005515 protein binding
IPI
PMID:25036637
A quantitative chaperone interaction network reveals the arc...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25036637
A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways.
GO:0005515 protein binding
IPI
PMID:25241761
Using an in situ proximity ligation assay to systematically ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25241761
Oct 9. Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a pathway network.
GO:0005515 protein binding
IPI
PMID:25303530
Enhancer activation requires trans-recruitment of a mega tra...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25303530
Enhancer activation requires trans-recruitment of a mega transcription factor complex.
GO:0005515 protein binding
IPI
PMID:25416956
A proteome-scale map of the human interactome network.
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25416956
A proteome-scale map of the human interactome network.
GO:0005515 protein binding
IPI
PMID:26871637
Widespread Expansion of Protein Interaction Capabilities by ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26871637
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
GO:0005515 protein binding
IPI
PMID:29892012
An interactome perturbation framework prioritizes damaging m...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:29892012
Jun 11. An interactome perturbation framework prioritizes damaging missense mutations for developmental disorders.
GO:0005515 protein binding
IPI
PMID:31515488
Extensive disruption of protein interactions by genetic vari...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31515488
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32296183
Apr 8. A reference map of the human binary protein interactome.
GO:0005515 protein binding
IPI
PMID:35512704
Systematic discovery of mutation-directed neo-protein-protei...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:35512704
2022 May 4. Systematic discovery of mutation-directed neo-protein-protein interactions in cancer.
GO:0005515 protein binding
IPI
PMID:9653119
The TRAP220 component of a thyroid hormone receptor- associa...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9653119
The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion.
GO:0000900 mRNA regulatory element binding translation repressor activity
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0000976 transcription cis-regulatory region binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0001223 transcription coactivator binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0001889 liver development
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0007281 germ cell development
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0007565 female pregnancy
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0008285 negative regulation of cell population proliferation
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0008584 male gonad development
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0010628 positive regulation of gene expression
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0017148 negative regulation of translation
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0021766 hippocampus development
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0030425 dendrite
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0030850 prostate gland development
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0031641 regulation of myelination
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0032355 response to estradiol
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0033189 response to vitamin A
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0034097 response to cytokine
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0042826 histone deacetylase binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0042981 regulation of apoptotic process
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0045471 response to ethanol
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0045666 positive regulation of neuron differentiation
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0048027 mRNA 5'-UTR binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0048167 regulation of synaptic plasticity
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0048471 perinuclear region of cytoplasm
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0060010 Sertoli cell fate commitment
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0071222 cellular response to lipopolysaccharide
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:1901363 heterocyclic compound binding
IEA
GO_REF:0000107
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0005730 nucleolus
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0005829 cytosol
IDA
GO_REF:0000052
PENDING
Summary: TODO: Review this GOA annotation
GO:0042789 mRNA transcription by RNA polymerase II
IDA
PMID:1310351
Retinoid X receptor interacts with nuclear receptors in reti...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:1310351
Retinoid X receptor interacts with nuclear receptors in retinoic acid, thyroid hormone and vitamin D3 signalling.
GO:0042789 mRNA transcription by RNA polymerase II
NAS
PMID:9430642
The coactivator TIF2 contains three nuclear receptor-binding...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9430642
The coactivator TIF2 contains three nuclear receptor-binding motifs and mediates transactivation through CBP binding-dependent and -independent pathways.
GO:0045944 positive regulation of transcription by RNA polymerase II
IDA
PMID:9430642
The coactivator TIF2 contains three nuclear receptor-binding...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9430642
The coactivator TIF2 contains three nuclear receptor-binding motifs and mediates transactivation through CBP binding-dependent and -independent pathways.
GO:0000785 chromatin
IDA
PMID:2825025
A human retinoic acid receptor which belongs to the family o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:2825025
A human retinoic acid receptor which belongs to the family of nuclear receptors.
GO:0004879 nuclear receptor activity
IDA
PMID:2825025
A human retinoic acid receptor which belongs to the family o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:2825025
A human retinoic acid receptor which belongs to the family of nuclear receptors.
GO:0005886 plasma membrane
IDA
PMID:2825025
A human retinoic acid receptor which belongs to the family o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:2825025
A human retinoic acid receptor which belongs to the family of nuclear receptors.
GO:0048384 retinoic acid receptor signaling pathway
IDA
PMID:2825025
A human retinoic acid receptor which belongs to the family o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:2825025
A human retinoic acid receptor which belongs to the family of nuclear receptors.
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-4341072
PENDING
Summary: TODO: Review this GOA annotation
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
IDA
PMID:21131358
Induction of miR-21 by retinoic acid in estrogen receptor-po...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21131358
2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen receptor-positive breast carcinoma cells: biological correlates and molecular targets.
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
IMP
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to l...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
GO:0001217 DNA-binding transcription repressor activity
IMP
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to l...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
GO:0071300 cellular response to retinoic acid
IMP
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to l...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
GO:1902894 negative regulation of miRNA transcription
IMP
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to l...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28122350
Transcriptional suppression of microRNA-27a contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
GO:0001223 transcription coactivator binding
IPI
PMID:17641689
MED25 is distinct from TRAP220/MED1 in cooperating with CBP ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17641689
Jul 19. MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation.
GO:0045944 positive regulation of transcription by RNA polymerase II
IDA
PMID:21131358
Induction of miR-21 by retinoic acid in estrogen receptor-po...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21131358
2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen receptor-positive breast carcinoma cells: biological correlates and molecular targets.
GO:1990837 sequence-specific double-stranded DNA binding
IDA
PMID:28473536
Impact of cytosine methylation on DNA binding specificities ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28473536
Impact of cytosine methylation on DNA binding specificities of human transcription factors.
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0003682 chromatin binding
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0032991 protein-containing complex
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0032991 protein-containing complex
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0048384 retinoic acid receptor signaling pathway
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0045944 positive regulation of transcription by RNA polymerase II
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0000785 chromatin
IDA
PMID:21131358
Induction of miR-21 by retinoic acid in estrogen receptor-po...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21131358
2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen receptor-positive breast carcinoma cells: biological correlates and molecular targets.
GO:0004879 nuclear receptor activity
IDA
PMID:21131358
Induction of miR-21 by retinoic acid in estrogen receptor-po...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21131358
2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen receptor-positive breast carcinoma cells: biological correlates and molecular targets.
GO:0000785 chromatin
ISA
GO_REF:0000113
PENDING
Summary: TODO: Review this GOA annotation
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
ISA
GO_REF:0000113
PENDING
Summary: TODO: Review this GOA annotation
GO:0051393 alpha-actinin binding
IPI
PMID:22351778
Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22351778
2012 Feb 17. Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-actinin 4 (ACTN4) protein mutants lose ability to activate transcription by nuclear hormone receptors.
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-5334854
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-5634103
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9009817
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-376419
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-382096
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9617067
PENDING
Summary: TODO: Review this GOA annotation
GO:0005654 nucleoplasm
TAS
Reactome:R-HSA-9860125
PENDING
Summary: TODO: Review this GOA annotation
GO:0043422 protein kinase B binding
IPI
PMID:16417524
Akt phosphorylates and suppresses the transactivation of ret...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16417524
Akt phosphorylates and suppresses the transactivation of retinoic acid receptor alpha.
GO:0051018 protein kinase A binding
IDA
PMID:20215566
Activity of retinoic acid receptor-alpha is directly regulat...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20215566
Mar 9. Activity of retinoic acid receptor-alpha is directly regulated at its protein kinase A sites in response to follicle-stimulating hormone signaling.
GO:0000785 chromatin
IDA
PMID:17363140
The core component of the mammalian SWI/SNF complex SMARCD3/...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17363140
The core component of the mammalian SWI/SNF complex SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid receptor.
GO:0005515 protein binding
IPI
PMID:17363140
The core component of the mammalian SWI/SNF complex SMARCD3/...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17363140
The core component of the mammalian SWI/SNF complex SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid receptor.
GO:0019899 enzyme binding
IPI
PMID:12039952
Identification of protein arginine methyltransferase 2 as a ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12039952
2002 May 30. Identification of protein arginine methyltransferase 2 as a coactivator for estrogen receptor alpha.
GO:0044323 retinoic acid-responsive element binding
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0019899 enzyme binding
IPI
PMID:9628876
Two distinct nuclear receptor interaction domains in NSD1, a...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9628876
Two distinct nuclear receptor interaction domains in NSD1, a novel SET protein that exhibits characteristics of both corepressors and coactivators.
GO:0003700 DNA-binding transcription factor activity
IDA
PMID:18922886
Retinoic acid-dependent activation of the polycystic kidney ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18922886
Retinoic acid-dependent activation of the polycystic kidney disease-1 (PKD1) promoter.
GO:0005515 protein binding
IPI
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0005634 nucleus
IDA
PMID:18845237
Retinoic acid regulates the human methionine sulfoxide reduc...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18845237
Oct 25. Retinoic acid regulates the human methionine sulfoxide reductase A (MSRA) gene via two distinct promoters.
GO:0005634 nucleus
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0030853 negative regulation of granulocyte differentiation
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0031490 chromatin DNA binding
IDA
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcrip...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19917671
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
GO:0045893 positive regulation of DNA-templated transcription
IDA
PMID:18845237
Retinoic acid regulates the human methionine sulfoxide reduc...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18845237
Oct 25. Retinoic acid regulates the human methionine sulfoxide reductase A (MSRA) gene via two distinct promoters.
GO:0005515 protein binding
IPI
PMID:19850744
Small ubiquitin-like modifier-2 modification of retinoic aci...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19850744
Oct 22. Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha regulates its subcellular localization and transcriptional activity.
GO:0005737 cytoplasm
IDA
PMID:19850744
Small ubiquitin-like modifier-2 modification of retinoic aci...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19850744
Oct 22. Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha regulates its subcellular localization and transcriptional activity.
GO:0006468 protein phosphorylation
IMP
PMID:16456540
P38MAPK-dependent phosphorylation and degradation of SRC-3/A...
REMOVE
Summary: MISANNOTATION: RARA is a nuclear hormone receptor (retinoic acid receptor) that functions as a ligand-activated transcription factor. PMID:16456540 describes "P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1" - p38MAPK is the kinase that phosphorylates SRC-3 coactivator, NOT RARA. RARA provides the context for this phosphorylation but does not perform it. UniProt confirms RARA "is phosphorylated by AKT1" and "Phosphorylated by PKA" - RARA is a SUBSTRATE of kinases, not a kinase itself. RARA has no kinase activity (belongs to NR1 nuclear hormone receptor subfamily).
Supporting Evidence:
PMID:16456540
P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1 and RARalpha-mediated transcription.
GO:0043277 apoptotic cell clearance
IMP
PMID:19628791
Induction of transglutaminase 2 by a liver X receptor/retino...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19628791
2009 Jul 23. Induction of transglutaminase 2 by a liver X receptor/retinoic acid receptor alpha pathway increases the clearance of apoptotic cells by human macrophages.
GO:0045893 positive regulation of DNA-templated transcription
IDA
PMID:19850744
Small ubiquitin-like modifier-2 modification of retinoic aci...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19850744
Oct 22. Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha regulates its subcellular localization and transcriptional activity.
GO:0045944 positive regulation of transcription by RNA polymerase II
IDA
PMID:19850744
Small ubiquitin-like modifier-2 modification of retinoic aci...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19850744
Oct 22. Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha regulates its subcellular localization and transcriptional activity.
GO:0045893 positive regulation of DNA-templated transcription
IMP
PMID:19628791
Induction of transglutaminase 2 by a liver X receptor/retino...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19628791
2009 Jul 23. Induction of transglutaminase 2 by a liver X receptor/retinoic acid receptor alpha pathway increases the clearance of apoptotic cells by human macrophages.
GO:0005102 signaling receptor binding
IDA
PMID:19628791
Induction of transglutaminase 2 by a liver X receptor/retino...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19628791
2009 Jul 23. Induction of transglutaminase 2 by a liver X receptor/retinoic acid receptor alpha pathway increases the clearance of apoptotic cells by human macrophages.
GO:0019904 protein domain specific binding
IPI
PMID:20413580
Human ADA3 regulates RARalpha transcriptional activity throu...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20413580
2010 Apr 22. Human ADA3 regulates RARalpha transcriptional activity through direct contact between LxxLL motifs and the receptor coactivator pocket.
GO:0003700 DNA-binding transcription factor activity
IDA
PMID:20413580
Human ADA3 regulates RARalpha transcriptional activity throu...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20413580
2010 Apr 22. Human ADA3 regulates RARalpha transcriptional activity through direct contact between LxxLL motifs and the receptor coactivator pocket.
GO:0005515 protein binding
IPI
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0005634 nucleus
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0008284 positive regulation of cell population proliferation
IMP
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0045787 positive regulation of cell cycle
IMP
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0045892 negative regulation of DNA-templated transcription
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0045893 positive regulation of DNA-templated transcription
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0045944 positive regulation of transcription by RNA polymerase II
IMP
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0051099 positive regulation of binding
IMP
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0071391 cellular response to estrogen stimulus
IDA
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20080953
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
GO:0001972 retinoic acid binding
IDA
PMID:2825025
A human retinoic acid receptor which belongs to the family o...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:2825025
A human retinoic acid receptor which belongs to the family of nuclear receptors.
GO:0032689 negative regulation of type II interferon production
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0032720 negative regulation of tumor necrosis factor production
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0032736 positive regulation of interleukin-13 production
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0032753 positive regulation of interleukin-4 production
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0032754 positive regulation of interleukin-5 production
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0045630 positive regulation of T-helper 2 cell differentiation
IDA
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activ...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18416830
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
GO:0032526 response to retinoic acid
IMP
PMID:17538076
Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17538076
2007 May 30. Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in human placental endothelial cells.
GO:0048384 retinoic acid receptor signaling pathway
IMP
PMID:17538076
Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in...
PENDING
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17538076
2007 May 30. Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in human placental endothelial cells.

References

Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Gene Ontology annotation of human sequence-specific DNA binding transcription factors (DbTFs) based on the TFClass database
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Structure of the RXR-RAR DNA-binding complex on the retinoic acid response element DR1.
Identification of protein arginine methyltransferase 2 as a coactivator for estrogen receptor alpha.
Retinoid X receptor interacts with nuclear receptors in retinoic acid, thyroid hormone and vitamin D3 signalling.
Towards a proteome-scale map of the human protein-protein interaction network.
Akt phosphorylates and suppresses the transactivation of retinoic acid receptor alpha.
P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1 and RARalpha-mediated transcription.
Additional sex comb-like 1 (ASXL1), in cooperation with SRC-1, acts as a ligand-dependent coactivator for retinoic acid receptor.
Phosphorylation by PKA potentiates retinoic acid receptor alpha activity by means of increasing interaction with and phosphorylation by cyclin H/cdk7.
The core component of the mammalian SWI/SNF complex SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid receptor.
Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in human placental endothelial cells.
Role of the polycomb repressive complex 2 in acute promyelocytic leukemia.
MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation.
Identification of retinoic acid as an inhibitor of transcription factor Nrf2 through activation of retinoic acid receptor alpha.
The Retinoic Acid Receptor-alpha mediates human T-cell activation and Th2 cytokine and chemokine production.
Retinoic acid regulates the human methionine sulfoxide reductase A (MSRA) gene via two distinct promoters.
Retinoic acid-dependent activation of the polycystic kidney disease-1 (PKD1) promoter.
ZNF423 is critically required for retinoic acid-induced differentiation and is a marker of neuroblastoma outcome.
Induction of transglutaminase 2 by a liver X receptor/retinoic acid receptor alpha pathway increases the clearance of apoptotic cells by human macrophages.
Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha regulates its subcellular localization and transcriptional activity.
Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional control of retinoid-induced cancer cell differentiation.
Reciprocal roles of SIRT1 and SKIP in the regulation of RAR activity: implication in the retinoic acid-induced neuronal differentiation of P19 cells.
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer.
LIM protein Ajuba functions as a nuclear receptor corepressor and negatively regulates retinoic acid signaling.
An atlas of combinatorial transcriptional regulation in mouse and man.
Activity of retinoic acid receptor-alpha is directly regulated at its protein kinase A sites in response to follicle-stimulating hormone signaling.
Human ADA3 regulates RARalpha transcriptional activity through direct contact between LxxLL motifs and the receptor coactivator pocket.
A unique secondary-structure switch controls constitutive gene repression by retinoic acid receptor.
Induction of miR-21 by retinoic acid in estrogen receptor-positive breast carcinoma cells: biological correlates and molecular targets.
Common architecture of nuclear receptor heterodimers on DNA direct repeat elements with different spacings.
Next-generation sequencing to generate interactome datasets.
Toward an understanding of the protein interaction network of the human liver.
A retinoic acid receptor RARΞ± pool present in membrane lipid rafts forms complexes with G protein Ξ±Q to activate p38MAPK.
Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-actinin 4 (ACTN4) protein mutants lose ability to activate transcription by nuclear hormone receptors.
The histone demethylase PHF8 governs retinoic acid response in acute promyelocytic leukemia.
Activation of Akt pathway by transcription-independent mechanisms of retinoic acid promotes survival and invasion in lung cancer cells.
Small ubiquitin-related modifier-1 modification regulates all-trans-retinoic acid-induced differentiation via stabilization of retinoic acid receptor Ξ±.
A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways.
Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a pathway network.
Enhancer activation requires trans-recruitment of a mega transcription factor complex.
A proteome-scale map of the human interactome network.
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
Transcriptional suppression of microRNA-27a contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
A human retinoic acid receptor which belongs to the family of nuclear receptors.
Impact of cytosine methylation on DNA binding specificities of human transcription factors.
An interactome perturbation framework prioritizes damaging missense mutations for developmental disorders.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
A reference map of the human binary protein interactome.
Systematic discovery of mutation-directed neo-protein-protein interactions in cancer.
The coactivator TIF2 contains three nuclear receptor-binding motifs and mediates transactivation through CBP binding-dependent and -independent pathways.
Two distinct nuclear receptor interaction domains in NSD1, a novel SET protein that exhibits characteristics of both corepressors and coactivators.
The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion.
Reactome:R-HSA-376419
Formation of NR-MED1 Coactivator Complex
Reactome:R-HSA-382096
Formation of NR-NCOR Corepressor Complex
Reactome:R-HSA-4341072
SUMOylation of RARA with SUMO2
Reactome:R-HSA-5334854
RAR:RXR binds SUMO-CRABP2:atRA
Reactome:R-HSA-5634103
SUMO-CRABP2 dissociates from atRA:RAR:RXR
Reactome:R-HSA-9009817
Acitretin binds to RAR:RXR
Reactome:R-HSA-9617067
All-trans retinoic acid binds RARA:RXRA at the promoter of the CEBPE gene
Reactome:R-HSA-9860125
Binding of ATRA to TGFBR3 gene promoter

πŸ“„ View Raw YAML

id: P10276
gene_symbol: RARA
product_type: PROTEIN
status: INITIALIZED
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: 'TODO: Add description for RARA'
existing_annotations:
  - term:
      id: GO:0000122
      label: negative regulation of transcription by RNA polymerase II
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0004879
      label: nuclear receptor activity
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0030154
      label: cell differentiation
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0090575
      label: RNA polymerase II transcription regulator complex
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0000978
      label: RNA polymerase II cis-regulatory region sequence-specific DNA 
        binding
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0048384
      label: retinoic acid receptor signaling pathway
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003677
      label: DNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0003700
      label: DNA-binding transcription factor activity
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0004879
      label: nuclear receptor activity
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: IEA
    original_reference_id: GO_REF:0000117
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005737
      label: cytoplasm
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0006355
      label: regulation of DNA-templated transcription
    evidence_type: IEA
    original_reference_id: GO_REF:0000002
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0008270
      label: zinc ion binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0043565
      label: sequence-specific DNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000120
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0046872
      label: metal ion binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000043
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0048384
      label: retinoic acid receptor signaling pathway
    evidence_type: IEA
    original_reference_id: GO_REF:0000002
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:1990837
      label: sequence-specific double-stranded DNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000117
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:10698945
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:10698945
          supporting_text: Structure of the RXR-RAR DNA-binding complex on the 
            retinoic acid response element DR1.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:16189514
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:16189514
          supporting_text: Towards a proteome-scale map of the human 
            protein-protein interaction network.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:16456540
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:16456540
          supporting_text: P38MAPK-dependent phosphorylation and degradation of 
            SRC-3/AIB1 and RARalpha-mediated transcription.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:16606617
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:16606617
          supporting_text: 2006 Apr 10. Additional sex comb-like 1 (ASXL1), in 
            cooperation with SRC-1, acts as a ligand-dependent coactivator for 
            retinoic acid receptor.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:16769902
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:16769902
          supporting_text: Phosphorylation by PKA potentiates retinoic acid 
            receptor alpha activity by means of increasing interaction with and 
            phosphorylation by cyclin H/cdk7.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:17560333
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17560333
          supporting_text: Role of the polycomb repressive complex 2 in acute 
            promyelocytic leukemia.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:17641689
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17641689
          supporting_text: Jul 19. MED25 is distinct from TRAP220/MED1 in 
            cooperating with CBP for retinoid receptor activation.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:18048326
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18048326
          supporting_text: Identification of retinoic acid as an inhibitor of 
            transcription factor Nrf2 through activation of retinoic acid 
            receptor alpha.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:19345331
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19345331
          supporting_text: ZNF423 is critically required for retinoic 
            acid-induced differentiation and is a marker of neuroblastoma 
            outcome.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:19934264
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19934264
          supporting_text: 'Nov 24. Reciprocal roles of SIRT1 and SKIP in the regulation
            of RAR activity: implication in the retinoic acid-induced neuronal differentiation
            of P19 cells.'
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:20133701
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20133701
          supporting_text: LIM protein Ajuba functions as a nuclear receptor 
            corepressor and negatively regulates retinoic acid signaling.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:20211142
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20211142
          supporting_text: An atlas of combinatorial transcriptional regulation 
            in mouse and man.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:20543827
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20543827
          supporting_text: Jun 13. A unique secondary-structure switch controls 
            constitutive gene repression by retinoic acid receptor.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:21478865
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21478865
          supporting_text: Apr 10. Common architecture of nuclear receptor 
            heterodimers on DNA direct repeat elements with different spacings.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:21516116
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21516116
          supporting_text: Next-generation sequencing to generate interactome 
            datasets.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:21988832
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21988832
          supporting_text: Toward an understanding of the protein interaction 
            network of the human liver.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:22056876
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22056876
          supporting_text: A retinoic acid receptor RARΞ± pool present in 
            membrane lipid rafts forms complexes with G protein Ξ±Q to activate 
            p38MAPK.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:22351778
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22351778
          supporting_text: 2012 Feb 17. Familial focal segmental 
            glomerulosclerosis (FSGS)-linked Ξ±-actinin 4 (ACTN4) protein mutants
            lose ability to activate transcription by nuclear hormone receptors.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:23518351
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:23518351
          supporting_text: The histone demethylase PHF8 governs retinoic acid 
            response in acute promyelocytic leukemia.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:23693014
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:23693014
          supporting_text: Activation of Akt pathway by 
            transcription-independent mechanisms of retinoic acid promotes 
            survival and invasion in lung cancer cells.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:24819975
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:24819975
          supporting_text: Small ubiquitin-related modifier-1 modification 
            regulates all-trans-retinoic acid-induced differentiation via 
            stabilization of retinoic acid receptor Ξ±.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:25036637
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:25036637
          supporting_text: A quantitative chaperone interaction network reveals 
            the architecture of cellular protein homeostasis pathways.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:25241761
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:25241761
          supporting_text: Oct 9. Using an in situ proximity ligation assay to 
            systematically profile endogenous protein-protein interactions in a 
            pathway network.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:25303530
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:25303530
          supporting_text: Enhancer activation requires trans-recruitment of a 
            mega transcription factor complex.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:25416956
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:25416956
          supporting_text: A proteome-scale map of the human interactome 
            network.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:26871637
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:26871637
          supporting_text: Widespread Expansion of Protein Interaction 
            Capabilities by Alternative Splicing.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:29892012
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:29892012
          supporting_text: Jun 11. An interactome perturbation framework 
            prioritizes damaging missense mutations for developmental disorders.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:31515488
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:31515488
          supporting_text: Extensive disruption of protein interactions by 
            genetic variants across the allele frequency spectrum in human 
            populations.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:32296183
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:32296183
          supporting_text: Apr 8. A reference map of the human binary protein 
            interactome.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:35512704
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:35512704
          supporting_text: 2022 May 4. Systematic discovery of mutation-directed
            neo-protein-protein interactions in cancer.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:9653119
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:9653119
          supporting_text: The TRAP220 component of a thyroid hormone receptor- 
            associated protein (TRAP) coactivator complex interacts directly 
            with nuclear receptors in a ligand-dependent fashion.
  - term:
      id: GO:0000900
      label: mRNA regulatory element binding translation repressor activity
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0000976
      label: transcription cis-regulatory region binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0000977
      label: RNA polymerase II transcription regulatory region sequence-specific
        DNA binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0001223
      label: transcription coactivator binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0001889
      label: liver development
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0007281
      label: germ cell development
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0007565
      label: female pregnancy
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0008285
      label: negative regulation of cell population proliferation
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0008584
      label: male gonad development
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0010628
      label: positive regulation of gene expression
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0017148
      label: negative regulation of translation
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0021766
      label: hippocampus development
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0030425
      label: dendrite
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0030850
      label: prostate gland development
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0031641
      label: regulation of myelination
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0032355
      label: response to estradiol
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0033189
      label: response to vitamin A
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0034097
      label: response to cytokine
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0042826
      label: histone deacetylase binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0042981
      label: regulation of apoptotic process
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0045471
      label: response to ethanol
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0045666
      label: positive regulation of neuron differentiation
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0048027
      label: mRNA 5'-UTR binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0048167
      label: regulation of synaptic plasticity
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0048471
      label: perinuclear region of cytoplasm
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0060010
      label: Sertoli cell fate commitment
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0071222
      label: cellular response to lipopolysaccharide
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:1901363
      label: heterocyclic compound binding
    evidence_type: IEA
    original_reference_id: GO_REF:0000107
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005730
      label: nucleolus
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005829
      label: cytosol
    evidence_type: IDA
    original_reference_id: GO_REF:0000052
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0042789
      label: mRNA transcription by RNA polymerase II
    evidence_type: IDA
    original_reference_id: PMID:1310351
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:1310351
          supporting_text: Retinoid X receptor interacts with nuclear receptors 
            in retinoic acid, thyroid hormone and vitamin D3 signalling.
  - term:
      id: GO:0042789
      label: mRNA transcription by RNA polymerase II
    evidence_type: NAS
    original_reference_id: PMID:9430642
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:9430642
          supporting_text: The coactivator TIF2 contains three nuclear 
            receptor-binding motifs and mediates transactivation through CBP 
            binding-dependent and -independent pathways.
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IDA
    original_reference_id: PMID:9430642
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:9430642
          supporting_text: The coactivator TIF2 contains three nuclear 
            receptor-binding motifs and mediates transactivation through CBP 
            binding-dependent and -independent pathways.
  - term:
      id: GO:0000785
      label: chromatin
    evidence_type: IDA
    original_reference_id: PMID:2825025
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:2825025
          supporting_text: A human retinoic acid receptor which belongs to the 
            family of nuclear receptors.
  - term:
      id: GO:0004879
      label: nuclear receptor activity
    evidence_type: IDA
    original_reference_id: PMID:2825025
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:2825025
          supporting_text: A human retinoic acid receptor which belongs to the 
            family of nuclear receptors.
  - term:
      id: GO:0005886
      label: plasma membrane
    evidence_type: IDA
    original_reference_id: PMID:2825025
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:2825025
          supporting_text: A human retinoic acid receptor which belongs to the 
            family of nuclear receptors.
  - term:
      id: GO:0048384
      label: retinoic acid receptor signaling pathway
    evidence_type: IDA
    original_reference_id: PMID:2825025
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:2825025
          supporting_text: A human retinoic acid receptor which belongs to the 
            family of nuclear receptors.
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-4341072
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0000978
      label: RNA polymerase II cis-regulatory region sequence-specific DNA 
        binding
    evidence_type: IDA
    original_reference_id: PMID:21131358
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21131358
          supporting_text: '2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen
            receptor-positive breast carcinoma cells: biological correlates and molecular
            targets.'
  - term:
      id: GO:0000978
      label: RNA polymerase II cis-regulatory region sequence-specific DNA 
        binding
    evidence_type: IMP
    original_reference_id: PMID:28122350
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28122350
          supporting_text: Transcriptional suppression of microRNA-27a 
            contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved 
            Wnt/Ξ²-catenin pathway.
  - term:
      id: GO:0001217
      label: DNA-binding transcription repressor activity
    evidence_type: IMP
    original_reference_id: PMID:28122350
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28122350
          supporting_text: Transcriptional suppression of microRNA-27a 
            contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved 
            Wnt/Ξ²-catenin pathway.
  - term:
      id: GO:0071300
      label: cellular response to retinoic acid
    evidence_type: IMP
    original_reference_id: PMID:28122350
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28122350
          supporting_text: Transcriptional suppression of microRNA-27a 
            contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved 
            Wnt/Ξ²-catenin pathway.
  - term:
      id: GO:1902894
      label: negative regulation of miRNA transcription
    evidence_type: IMP
    original_reference_id: PMID:28122350
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28122350
          supporting_text: Transcriptional suppression of microRNA-27a 
            contributes to laryngeal cancer differentiation via GSK-3Ξ²-involved 
            Wnt/Ξ²-catenin pathway.
  - term:
      id: GO:0001223
      label: transcription coactivator binding
    evidence_type: IPI
    original_reference_id: PMID:17641689
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17641689
          supporting_text: Jul 19. MED25 is distinct from TRAP220/MED1 in 
            cooperating with CBP for retinoid receptor activation.
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IDA
    original_reference_id: PMID:21131358
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21131358
          supporting_text: '2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen
            receptor-positive breast carcinoma cells: biological correlates and molecular
            targets.'
  - term:
      id: GO:1990837
      label: sequence-specific double-stranded DNA binding
    evidence_type: IDA
    original_reference_id: PMID:28473536
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:28473536
          supporting_text: Impact of cytosine methylation on DNA binding 
            specificities of human transcription factors.
  - term:
      id: GO:0000977
      label: RNA polymerase II transcription regulatory region sequence-specific
        DNA binding
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0000978
      label: RNA polymerase II cis-regulatory region sequence-specific DNA 
        binding
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0003682
      label: chromatin binding
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0032991
      label: protein-containing complex
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0032991
      label: protein-containing complex
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0048384
      label: retinoic acid receptor signaling pathway
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0000785
      label: chromatin
    evidence_type: IDA
    original_reference_id: PMID:21131358
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21131358
          supporting_text: '2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen
            receptor-positive breast carcinoma cells: biological correlates and molecular
            targets.'
  - term:
      id: GO:0004879
      label: nuclear receptor activity
    evidence_type: IDA
    original_reference_id: PMID:21131358
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:21131358
          supporting_text: '2010 Dec 3. Induction of miR-21 by retinoic acid in estrogen
            receptor-positive breast carcinoma cells: biological correlates and molecular
            targets.'
  - term:
      id: GO:0000785
      label: chromatin
    evidence_type: ISA
    original_reference_id: GO_REF:0000113
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0000981
      label: DNA-binding transcription factor activity, RNA polymerase 
        II-specific
    evidence_type: ISA
    original_reference_id: GO_REF:0000113
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0051393
      label: alpha-actinin binding
    evidence_type: IPI
    original_reference_id: PMID:22351778
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:22351778
          supporting_text: 2012 Feb 17. Familial focal segmental 
            glomerulosclerosis (FSGS)-linked Ξ±-actinin 4 (ACTN4) protein mutants
            lose ability to activate transcription by nuclear hormone receptors.
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-5334854
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-5634103
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9009817
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-376419
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-382096
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9617067
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0005654
      label: nucleoplasm
    evidence_type: TAS
    original_reference_id: Reactome:R-HSA-9860125
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
  - term:
      id: GO:0043422
      label: protein kinase B binding
    evidence_type: IPI
    original_reference_id: PMID:16417524
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:16417524
          supporting_text: Akt phosphorylates and suppresses the transactivation
            of retinoic acid receptor alpha.
  - term:
      id: GO:0051018
      label: protein kinase A binding
    evidence_type: IDA
    original_reference_id: PMID:20215566
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20215566
          supporting_text: Mar 9. Activity of retinoic acid receptor-alpha is 
            directly regulated at its protein kinase A sites in response to 
            follicle-stimulating hormone signaling.
  - term:
      id: GO:0000785
      label: chromatin
    evidence_type: IDA
    original_reference_id: PMID:17363140
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17363140
          supporting_text: The core component of the mammalian SWI/SNF complex 
            SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid 
            receptor.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:17363140
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17363140
          supporting_text: The core component of the mammalian SWI/SNF complex 
            SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid 
            receptor.
  - term:
      id: GO:0019899
      label: enzyme binding
    evidence_type: IPI
    original_reference_id: PMID:12039952
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:12039952
          supporting_text: 2002 May 30. Identification of protein arginine 
            methyltransferase 2 as a coactivator for estrogen receptor alpha.
  - term:
      id: GO:0044323
      label: retinoic acid-responsive element binding
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0019899
      label: enzyme binding
    evidence_type: IPI
    original_reference_id: PMID:9628876
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:9628876
          supporting_text: Two distinct nuclear receptor interaction domains in 
            NSD1, a novel SET protein that exhibits characteristics of both 
            corepressors and coactivators.
  - term:
      id: GO:0003700
      label: DNA-binding transcription factor activity
    evidence_type: IDA
    original_reference_id: PMID:18922886
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18922886
          supporting_text: Retinoic acid-dependent activation of the polycystic 
            kidney disease-1 (PKD1) promoter.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:18845237
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18845237
          supporting_text: Oct 25. Retinoic acid regulates the human methionine 
            sulfoxide reductase A (MSRA) gene via two distinct promoters.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0030853
      label: negative regulation of granulocyte differentiation
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0031490
      label: chromatin DNA binding
    evidence_type: IDA
    original_reference_id: PMID:19917671
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19917671
          supporting_text: Loss of CAK phosphorylation of RAR{alpha} mediates 
            transcriptional control of retinoid-induced cancer cell 
            differentiation.
  - term:
      id: GO:0045893
      label: positive regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:18845237
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18845237
          supporting_text: Oct 25. Retinoic acid regulates the human methionine 
            sulfoxide reductase A (MSRA) gene via two distinct promoters.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:19850744
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19850744
          supporting_text: Oct 22. Small ubiquitin-like modifier-2 modification 
            of retinoic acid receptor-alpha regulates its subcellular 
            localization and transcriptional activity.
  - term:
      id: GO:0005737
      label: cytoplasm
    evidence_type: IDA
    original_reference_id: PMID:19850744
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19850744
          supporting_text: Oct 22. Small ubiquitin-like modifier-2 modification 
            of retinoic acid receptor-alpha regulates its subcellular 
            localization and transcriptional activity.
  - term:
      id: GO:0006468
      label: protein phosphorylation
    evidence_type: IMP
    original_reference_id: PMID:16456540
    review:
      summary: >-
        MISANNOTATION: RARA is a nuclear hormone receptor (retinoic acid receptor)
        that functions as a ligand-activated transcription factor. PMID:16456540
        describes "P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1"
        - p38MAPK is the kinase that phosphorylates SRC-3 coactivator, NOT RARA.
        RARA provides the context for this phosphorylation but does not perform it.
        UniProt confirms RARA "is phosphorylated by AKT1" and "Phosphorylated by PKA"
        - RARA is a SUBSTRATE of kinases, not a kinase itself. RARA has no kinase
        activity (belongs to NR1 nuclear hormone receptor subfamily).
      action: REMOVE
      supported_by:
        - reference_id: PMID:16456540
          supporting_text: P38MAPK-dependent phosphorylation and degradation of 
            SRC-3/AIB1 and RARalpha-mediated transcription.
  - term:
      id: GO:0043277
      label: apoptotic cell clearance
    evidence_type: IMP
    original_reference_id: PMID:19628791
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19628791
          supporting_text: 2009 Jul 23. Induction of transglutaminase 2 by a 
            liver X receptor/retinoic acid receptor alpha pathway increases the 
            clearance of apoptotic cells by human macrophages.
  - term:
      id: GO:0045893
      label: positive regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:19850744
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19850744
          supporting_text: Oct 22. Small ubiquitin-like modifier-2 modification 
            of retinoic acid receptor-alpha regulates its subcellular 
            localization and transcriptional activity.
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IDA
    original_reference_id: PMID:19850744
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19850744
          supporting_text: Oct 22. Small ubiquitin-like modifier-2 modification 
            of retinoic acid receptor-alpha regulates its subcellular 
            localization and transcriptional activity.
  - term:
      id: GO:0045893
      label: positive regulation of DNA-templated transcription
    evidence_type: IMP
    original_reference_id: PMID:19628791
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19628791
          supporting_text: 2009 Jul 23. Induction of transglutaminase 2 by a 
            liver X receptor/retinoic acid receptor alpha pathway increases the 
            clearance of apoptotic cells by human macrophages.
  - term:
      id: GO:0005102
      label: signaling receptor binding
    evidence_type: IDA
    original_reference_id: PMID:19628791
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:19628791
          supporting_text: 2009 Jul 23. Induction of transglutaminase 2 by a 
            liver X receptor/retinoic acid receptor alpha pathway increases the 
            clearance of apoptotic cells by human macrophages.
  - term:
      id: GO:0019904
      label: protein domain specific binding
    evidence_type: IPI
    original_reference_id: PMID:20413580
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20413580
          supporting_text: 2010 Apr 22. Human ADA3 regulates RARalpha 
            transcriptional activity through direct contact between LxxLL motifs
            and the receptor coactivator pocket.
  - term:
      id: GO:0003700
      label: DNA-binding transcription factor activity
    evidence_type: IDA
    original_reference_id: PMID:20413580
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20413580
          supporting_text: 2010 Apr 22. Human ADA3 regulates RARalpha 
            transcriptional activity through direct contact between LxxLL motifs
            and the receptor coactivator pocket.
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0005634
      label: nucleus
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0008284
      label: positive regulation of cell population proliferation
    evidence_type: IMP
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0045787
      label: positive regulation of cell cycle
    evidence_type: IMP
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0045892
      label: negative regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0045893
      label: positive regulation of DNA-templated transcription
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0045944
      label: positive regulation of transcription by RNA polymerase II
    evidence_type: IMP
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0051099
      label: positive regulation of binding
    evidence_type: IMP
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0071391
      label: cellular response to estrogen stimulus
    evidence_type: IDA
    original_reference_id: PMID:20080953
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:20080953
          supporting_text: Cooperative interaction between retinoic acid 
            receptor-alpha and estrogen receptor in breast cancer.
  - term:
      id: GO:0001972
      label: retinoic acid binding
    evidence_type: IDA
    original_reference_id: PMID:2825025
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:2825025
          supporting_text: A human retinoic acid receptor which belongs to the 
            family of nuclear receptors.
  - term:
      id: GO:0032689
      label: negative regulation of type II interferon production
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0032720
      label: negative regulation of tumor necrosis factor production
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0032736
      label: positive regulation of interleukin-13 production
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0032753
      label: positive regulation of interleukin-4 production
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0032754
      label: positive regulation of interleukin-5 production
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0045630
      label: positive regulation of T-helper 2 cell differentiation
    evidence_type: IDA
    original_reference_id: PMID:18416830
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:18416830
          supporting_text: The Retinoic Acid Receptor-alpha mediates human 
            T-cell activation and Th2 cytokine and chemokine production.
  - term:
      id: GO:0032526
      label: response to retinoic acid
    evidence_type: IMP
    original_reference_id: PMID:17538076
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17538076
          supporting_text: 2007 May 30. Regulation of 17-beta hydroxysteroid 
            dehydrogenase type 2 in human placental endothelial cells.
  - term:
      id: GO:0048384
      label: retinoic acid receptor signaling pathway
    evidence_type: IMP
    original_reference_id: PMID:17538076
    review:
      summary: 'TODO: Review this GOA annotation'
      action: PENDING
      supported_by:
        - reference_id: PMID:17538076
          supporting_text: 2007 May 30. Regulation of 17-beta hydroxysteroid 
            dehydrogenase type 2 in human placental endothelial cells.
references:
  - id: GO_REF:0000002
    title: Gene Ontology annotation through association of InterPro records with
      GO terms
    findings: []
  - id: GO_REF:0000033
    title: Annotation inferences using phylogenetic trees
    findings: []
  - id: GO_REF:0000043
    title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword 
      mapping
    findings: []
  - id: GO_REF:0000052
    title: Gene Ontology annotation based on curation of immunofluorescence data
    findings: []
  - id: GO_REF:0000107
    title: Automatic transfer of experimentally verified manual GO annotation 
      data to orthologs using Ensembl Compara
    findings: []
  - id: GO_REF:0000113
    title: Gene Ontology annotation of human sequence-specific DNA binding 
      transcription factors (DbTFs) based on the TFClass database
    findings: []
  - id: GO_REF:0000117
    title: Electronic Gene Ontology annotations created by ARBA machine learning
      models
    findings: []
  - id: GO_REF:0000120
    title: Combined Automated Annotation using Multiple IEA Methods
    findings: []
  - id: PMID:10698945
    title: Structure of the RXR-RAR DNA-binding complex on the retinoic acid 
      response element DR1.
    findings: []
  - id: PMID:12039952
    title: Identification of protein arginine methyltransferase 2 as a 
      coactivator for estrogen receptor alpha.
    findings: []
  - id: PMID:1310351
    title: Retinoid X receptor interacts with nuclear receptors in retinoic 
      acid, thyroid hormone and vitamin D3 signalling.
    findings: []
  - id: PMID:16189514
    title: Towards a proteome-scale map of the human protein-protein interaction
      network.
    findings: []
  - id: PMID:16417524
    title: Akt phosphorylates and suppresses the transactivation of retinoic 
      acid receptor alpha.
    findings: []
  - id: PMID:16456540
    title: P38MAPK-dependent phosphorylation and degradation of SRC-3/AIB1 and 
      RARalpha-mediated transcription.
    findings: []
  - id: PMID:16606617
    title: Additional sex comb-like 1 (ASXL1), in cooperation with SRC-1, acts 
      as a ligand-dependent coactivator for retinoic acid receptor.
    findings: []
  - id: PMID:16769902
    title: Phosphorylation by PKA potentiates retinoic acid receptor alpha 
      activity by means of increasing interaction with and phosphorylation by 
      cyclin H/cdk7.
    findings: []
  - id: PMID:17363140
    title: The core component of the mammalian SWI/SNF complex SMARCD3/BAF60c is
      a coactivator for the nuclear retinoic acid receptor.
    findings: []
  - id: PMID:17538076
    title: Regulation of 17-beta hydroxysteroid dehydrogenase type 2 in human 
      placental endothelial cells.
    findings: []
  - id: PMID:17560333
    title: Role of the polycomb repressive complex 2 in acute promyelocytic 
      leukemia.
    findings: []
  - id: PMID:17641689
    title: MED25 is distinct from TRAP220/MED1 in cooperating with CBP for 
      retinoid receptor activation.
    findings: []
  - id: PMID:18048326
    title: Identification of retinoic acid as an inhibitor of transcription 
      factor Nrf2 through activation of retinoic acid receptor alpha.
    findings: []
  - id: PMID:18416830
    title: The Retinoic Acid Receptor-alpha mediates human T-cell activation and
      Th2 cytokine and chemokine production.
    findings: []
  - id: PMID:18845237
    title: Retinoic acid regulates the human methionine sulfoxide reductase A 
      (MSRA) gene via two distinct promoters.
    findings: []
  - id: PMID:18922886
    title: Retinoic acid-dependent activation of the polycystic kidney disease-1
      (PKD1) promoter.
    findings: []
  - id: PMID:19345331
    title: ZNF423 is critically required for retinoic acid-induced 
      differentiation and is a marker of neuroblastoma outcome.
    findings: []
  - id: PMID:19628791
    title: Induction of transglutaminase 2 by a liver X receptor/retinoic acid 
      receptor alpha pathway increases the clearance of apoptotic cells by human
      macrophages.
    findings: []
  - id: PMID:19850744
    title: >-
      Small ubiquitin-like modifier-2 modification of retinoic acid receptor-alpha
      regulates its subcellular localization and transcriptional activity.
    findings: []
  - id: PMID:19917671
    title: Loss of CAK phosphorylation of RAR{alpha} mediates transcriptional 
      control of retinoid-induced cancer cell differentiation.
    findings: []
  - id: PMID:19934264
    title: 'Reciprocal roles of SIRT1 and SKIP in the regulation of RAR activity:
      implication in the retinoic acid-induced neuronal differentiation of P19 cells.'
    findings: []
  - id: PMID:20080953
    title: Cooperative interaction between retinoic acid receptor-alpha and 
      estrogen receptor in breast cancer.
    findings: []
  - id: PMID:20133701
    title: LIM protein Ajuba functions as a nuclear receptor corepressor and 
      negatively regulates retinoic acid signaling.
    findings: []
  - id: PMID:20211142
    title: An atlas of combinatorial transcriptional regulation in mouse and 
      man.
    findings: []
  - id: PMID:20215566
    title: Activity of retinoic acid receptor-alpha is directly regulated at its
      protein kinase A sites in response to follicle-stimulating hormone 
      signaling.
    findings: []
  - id: PMID:20413580
    title: Human ADA3 regulates RARalpha transcriptional activity through direct
      contact between LxxLL motifs and the receptor coactivator pocket.
    findings: []
  - id: PMID:20543827
    title: A unique secondary-structure switch controls constitutive gene 
      repression by retinoic acid receptor.
    findings: []
  - id: PMID:21131358
    title: 'Induction of miR-21 by retinoic acid in estrogen receptor-positive breast
      carcinoma cells: biological correlates and molecular targets.'
    findings: []
  - id: PMID:21478865
    title: Common architecture of nuclear receptor heterodimers on DNA direct 
      repeat elements with different spacings.
    findings: []
  - id: PMID:21516116
    title: Next-generation sequencing to generate interactome datasets.
    findings: []
  - id: PMID:21988832
    title: Toward an understanding of the protein interaction network of the 
      human liver.
    findings: []
  - id: PMID:22056876
    title: A retinoic acid receptor RARΞ± pool present in membrane lipid rafts 
      forms complexes with G protein Ξ±Q to activate p38MAPK.
    findings: []
  - id: PMID:22351778
    title: Familial focal segmental glomerulosclerosis (FSGS)-linked Ξ±-actinin 4
      (ACTN4) protein mutants lose ability to activate transcription by nuclear 
      hormone receptors.
    findings: []
  - id: PMID:23518351
    title: The histone demethylase PHF8 governs retinoic acid response in acute 
      promyelocytic leukemia.
    findings: []
  - id: PMID:23693014
    title: Activation of Akt pathway by transcription-independent mechanisms of 
      retinoic acid promotes survival and invasion in lung cancer cells.
    findings: []
  - id: PMID:24819975
    title: Small ubiquitin-related modifier-1 modification regulates 
      all-trans-retinoic acid-induced differentiation via stabilization of 
      retinoic acid receptor Ξ±.
    findings: []
  - id: PMID:25036637
    title: A quantitative chaperone interaction network reveals the architecture
      of cellular protein homeostasis pathways.
    findings: []
  - id: PMID:25241761
    title: Using an in situ proximity ligation assay to systematically profile 
      endogenous protein-protein interactions in a pathway network.
    findings: []
  - id: PMID:25303530
    title: Enhancer activation requires trans-recruitment of a mega 
      transcription factor complex.
    findings: []
  - id: PMID:25416956
    title: A proteome-scale map of the human interactome network.
    findings: []
  - id: PMID:26871637
    title: Widespread Expansion of Protein Interaction Capabilities by 
      Alternative Splicing.
    findings: []
  - id: PMID:28122350
    title: Transcriptional suppression of microRNA-27a contributes to laryngeal 
      cancer differentiation via GSK-3Ξ²-involved Wnt/Ξ²-catenin pathway.
    findings: []
  - id: PMID:2825025
    title: A human retinoic acid receptor which belongs to the family of nuclear
      receptors.
    findings: []
  - id: PMID:28473536
    title: Impact of cytosine methylation on DNA binding specificities of human 
      transcription factors.
    findings: []
  - id: PMID:29892012
    title: An interactome perturbation framework prioritizes damaging missense 
      mutations for developmental disorders.
    findings: []
  - id: PMID:31515488
    title: Extensive disruption of protein interactions by genetic variants 
      across the allele frequency spectrum in human populations.
    findings: []
  - id: PMID:32296183
    title: A reference map of the human binary protein interactome.
    findings: []
  - id: PMID:35512704
    title: Systematic discovery of mutation-directed neo-protein-protein 
      interactions in cancer.
    findings: []
  - id: PMID:9430642
    title: The coactivator TIF2 contains three nuclear receptor-binding motifs 
      and mediates transactivation through CBP binding-dependent and 
      -independent pathways.
    findings: []
  - id: PMID:9628876
    title: Two distinct nuclear receptor interaction domains in NSD1, a novel 
      SET protein that exhibits characteristics of both corepressors and 
      coactivators.
    findings: []
  - id: PMID:9653119
    title: The TRAP220 component of a thyroid hormone receptor- associated 
      protein (TRAP) coactivator complex interacts directly with nuclear 
      receptors in a ligand-dependent fashion.
    findings: []
  - id: Reactome:R-HSA-376419
    title: Formation of NR-MED1 Coactivator Complex
    findings: []
  - id: Reactome:R-HSA-382096
    title: Formation of NR-NCOR Corepressor Complex
    findings: []
  - id: Reactome:R-HSA-4341072
    title: SUMOylation of RARA with SUMO2
    findings: []
  - id: Reactome:R-HSA-5334854
    title: RAR:RXR binds SUMO-CRABP2:atRA
    findings: []
  - id: Reactome:R-HSA-5634103
    title: SUMO-CRABP2 dissociates from atRA:RAR:RXR
    findings: []
  - id: Reactome:R-HSA-9009817
    title: Acitretin binds to RAR:RXR
    findings: []
  - id: Reactome:R-HSA-9617067
    title: All-trans retinoic acid binds RARA:RXRA at the promoter of the CEBPE 
      gene
    findings: []
  - id: Reactome:R-HSA-9860125
    title: Binding of ATRA to TGFBR3 gene promoter
    findings: []