RASA4B

UniProt ID: C9J798
Organism: Homo sapiens
Review Status: COMPLETE
Aliases:
RAS p21 protein activator 4B GAP1 family member 4B
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Gene Description

RAS p21 protein activator 4B (RASA4B, ~803 amino acids, ~90 kDa), member of GAP1 family of RasGAPs. Contains modular architecture: two N-terminal C2 domains (Ca2+-dependent phospholipid binding), pleckstrin homology (PH) domain, and C-terminal RasGAP catalytic domain with arginine finger motif. Paralog of RASA4/CAPRI arising from ancient gene duplication. Functions as calcium-regulated GTPase-activating protein that inactivates RAS proteins by accelerating GTP hydrolysis, converting active RAS-GTP to inactive RAS-GDP. Dual substrate specificity for RAS proteins (H-Ras, K-Ras, N-Ras, R-Ras) and potentially RAP1 GTPase. Under basal conditions, predominantly cytosolic. Upon intracellular Ca2+ elevation, C2 domains bind calcium and acidic phospholipids, triggering translocation to plasma membrane where RAS is located. Membrane association activates GAP activity - acts as calcium decoder linking Ca2+ signals to RAS pathway attenuation. Negatively regulates RAS-MAPK and RAS-PI3K signaling cascades. May serve as molecular adaptor linking calcium signaling, RAS/RAP GTPase regulation, and possibly actin-regulating pathways. Expression ubiquitous but tissue-enriched in skeletal muscle, with significant expression in brain, endometrium, and other tissues. By shutting off RAS in response to calcium, integrates growth factor receptor signaling with calcium oscillations. Potential roles in muscle excitation, neuronal activity, immune cell activation, and growth factor/hormone responses where calcium and RAS pathways intersect. May contribute to tumor suppression by restraining oncogenic RAS signaling. Association with pancreatic cancer (favorable prognosis with high expression) and gastric cancer (unfavorable with high expression) suggests context-dependent roles in tumorigenesis.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005096 GTPase activator activity
IBA
GO_REF:0000033
ACCEPT
Summary: GTPase activator activity - RasGAP function.
Reason: Core enzymatic function.
Supporting Evidence:
file:human/RASA4B/RASA4B-deep-research-openai.md
See deep research file for comprehensive analysis
file:human/RASA4B/RASA4B-deep-research-falcon.md
Family-level evidence indicates that GAP1-family members can act as GAPs for **Ras and Rap1** (dual specificity is described for GAP1 subfamily members) and that membrane recruitment (via PH-phosphoinositide binding and/or C2-calcium/phospholipid interactions) can be essential for activity.
GO:1902531 regulation of intracellular signal transduction
IBA
GO_REF:0000033
ACCEPT
Summary: Regulation of intracellular signal transduction - RasGAP regulates RAS-MAPK pathway. Note: Diez et al. 2011 (PMID:21447561) reported that RASA4B may be a pseudogene/truncated transcript; UniProt (PMID:38808367) maintains C9J798 as a protein. The IBA inference is based on family-level GAP1-subfamily evidence and remains plausible pending direct experimental confirmation in human (PR #768 review).
Reason: Core regulatory function inferred from family-level evidence. Pseudogene/truncation caveat from Diez 2011 noted but the IBA-level annotation remains defensible as an ortholog-based prediction of the conserved GAP1-subfamily regulatory function.
Supporting Evidence:
file:human/RASA4B/RASA4B-deep-research-falcon.md
likely participates in **negative regulation of Ras-family signaling** and potentially interfaces with calcium/membrane-dependent regulation as described for related GAP1-family proteins.
GO:0005096 GTPase activator activity
IEA
GO_REF:0000120
ACCEPT
Summary: GTPase activator activity - RasGAP function.
Reason: Core enzymatic function.
GO:0005543 phospholipid binding
IEA
GO_REF:0000002
ACCEPT
Summary: Phospholipid binding - C2 and PH domains bind phospholipids for membrane targeting.
Reason: Membrane recruitment mechanism.
Supporting Evidence:
file:human/RASA4B/RASA4B-deep-research-falcon.md
**C2 domains**: commonly linked to membrane interactions and, in some family members, calcium-dependent membrane association.
GO:0005829 cytosol
IEA
GO_REF:0000120
ACCEPT
Summary: Cytosol - cytosolic at basal calcium levels.
Reason: Resting state localization.
GO:0005886 plasma membrane
IEA
GO_REF:0000044
ACCEPT
Summary: Plasma membrane - translocates to membrane upon Ca2+ elevation.
Reason: Active state localization.
GO:0008270 zinc ion binding
IEA
GO_REF:0000043
ACCEPT
Summary: Zinc ion binding - RasGAP domain requires zinc for structure/function.
Reason: Catalytic requirement.
GO:0035556 intracellular signal transduction
IEA
GO_REF:0000002
ACCEPT
Summary: Intracellular signal transduction - mediates RAS signaling regulation.
Reason: Signaling pathway role.
GO:0046580 negative regulation of Ras protein signal transduction
IEA
GO_REF:0000002
ACCEPT
Summary: Negative regulation of Ras protein signal transduction.
Reason: Core function.
GO:0046872 metal ion binding
IEA
GO_REF:0000043
KEEP AS NON CORE
Summary: Metal ion binding - general metal binding redundant with zinc binding.
Reason: General annotation.
GO:0071277 cellular response to calcium ion
IEA
GO_REF:0000002
ACCEPT
Summary: Cellular response to calcium ion - Ca2+-triggered membrane translocation and activation.
Reason: Calcium-sensing mechanism.
Supporting Evidence:
file:human/RASA4B/RASA4B-deep-research-falcon.md
structural/mechanistic RasGAP reviews emphasize that for proteins such as RASA4 and RASAL1, detectable RasGAP activity depends on calcium-dependent interaction of the C2 domain with membranes, reinforcing the idea that membrane recruitment can be a prerequisite for catalytic action in this branch of the family

Core Functions

Calcium-regulated RasGAP that catalyzes GTP hydrolysis on RAS proteins (H-Ras, K-Ras, N-Ras) and potentially RAP1, converting them from active GTP-bound to inactive GDP-bound state. C2 domains mediate Ca2+-dependent translocation to plasma membrane where RAS resides. Functions as negative regulator of RAS-MAPK and RAS-PI3K pathways. Links calcium oscillations to RAS pathway control.

Supporting Evidence:
  • file:human/RASA4B/RASA4B-uniprot.txt
    Calcium-regulated RasGAP that catalyzes GTP hydrolysis on RAS proteins (H-Ras, K-Ras, N-Ras) and potentially RAP1, converting them from active GTP-bound to inactive GDP-bound state. C2 domains mediate...

References

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Deep Research

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(RASA4B-deep-research-falcon.md)

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OpenAI

(RASA4B-deep-research-openai.md)

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