SLC14A1 encodes urea transporter 1 (UT-B), a facilitative urea transporter that forms the molecular basis of the Kidd (JK) blood group system. The protein functions as a homotrimer, with each subunit containing a membrane-spanning pore formed by 10 transmembrane helices. UT-B enables rapid, energy-independent equilibration of urea across cell membranes via a channel-like mechanism. It is abundantly expressed on erythrocytes where it protects red blood cells from osmotic stress during circulation through the hyperosmotic renal medulla, and on endothelial cells of the renal vasa recta where it contributes to the urinary concentrating mechanism. Recent structural studies (2023-2024) have resolved the human UT-B structure, revealing conserved urea recognition motifs and providing insight into selective inhibitor binding. Notably, at physiological expression levels, UT-B is a selective urea transporter and does NOT function as a water channel.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0071918
urea transmembrane transport
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: This IBA annotation correctly identifies urea transmembrane transport as a core biological process for SLC14A1. The phylogenetic inference is well-supported by extensive experimental evidence across the urea transporter family. Multiple publications demonstrate that SLC14A1/HUT11 mediates facilitated urea transport in erythrocytes and kidney [PMID:7989337, PMID:7797558, PMID:8997401, PMID:10514515].
Reason: Urea transmembrane transport is the primary and defining function of SLC14A1. The protein belongs to the urea transporter family (PANTHER PTHR10464) and all functional studies confirm this activity. The phylogenetic inference from IBA is strongly supported by direct experimental evidence in human cells.
Supporting Evidence:
PMID:7989337
Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport that was inhibited, as described in mammalian erythrocytes, by very low concentrations of phloretin, p-chloromercuribenzene sulfonate, and urea analogues.
PMID:7797558
Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity
file:human/SLC14A1/SLC14A1-deep-research-falcon.md
UT-B is a facilitative channel specialized for urea. High-resolution structures of human UT-B and UT-A paralogs, together with cryo-EM across multiple states, reveal a conserved urea recognition motif and an H-bond transfer path that guides urea through the pore
|
|
GO:0006833
water transport
|
IEA
GO_REF:0000108 |
REMOVE |
Summary: This annotation is problematic and should be removed. While SLC14A1 can facilitate water transport when overexpressed at unphysiological levels in oocytes, this is an artifact of overexpression. PMID:10514515 explicitly demonstrates that at physiological expression levels, the Kidd/urea transporter does NOT function as a water channel. The paper title states this conclusion directly.
Reason: The annotation of water transport to SLC14A1 is incorrect under physiological conditions. PMID:10514515 definitively shows that water permeability is only observed at unphysiological overexpression levels. At plasma membrane expression levels close to those in red cells, HUT11A-mediated water transport was absent. Jk(a-b-) red cells that lack UT-B have normal water permeability (PMID:7797558), further confirming water transport is not a function of this protein.
Supporting Evidence:
PMID:10514515
at plasma membrane expression levels close to the level observed in the red cell membrane, HUT11A-mediated water transport and small solutes uptake were absent
PMID:10514515
These findings show that, at physiological expression levels, the HUT11A transporter confers urea permeability but not water permeability, and that the observed water permeability is a feature of the red cell urea transporter when expressed at unphysiological high levels.
PMID:7797558
Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity, but a normal water permeability
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Plasma membrane localization is well-supported by multiple experimental studies. SLC14A1 is a multi-pass membrane protein expressed on erythrocyte plasma membranes and endothelial cells of the renal vasa recta [PMID:7797558, PMID:10514515].
Reason: The IEA annotation is correct and corroborated by multiple IDA annotations from experimental studies. The protein has been localized to the plasma membrane by immunoprecipitation, immunoblotting, and functional studies in erythrocytes.
Supporting Evidence:
PMID:7797558
A rabbit antibody raised against the predicted NH2-terminal amino-acids of the HUT11 protein reacted on immunoblots with a 46-60-kDa component present in all human erythrocytes except those from Jk(a-b-) individuals.
|
|
GO:0015204
urea transmembrane transporter activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Urea transmembrane transporter activity is the core molecular function of SLC14A1. This IEA annotation is strongly supported by direct experimental evidence from multiple publications demonstrating facilitated urea transport in Xenopus oocyte expression systems [PMID:7989337, PMID:8997401, PMID:10514515].
Reason: This is the defining molecular function of UT-B. The IEA is correct and reinforced by multiple IDA annotations in this same annotation set.
Supporting Evidence:
PMID:7989337
Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport
PMID:8997401
Both proteins allow the rapid transfer of urea but not of water.
|
|
GO:0016020
membrane
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: The annotation to the generic 'membrane' term is correct but less informative than the plasma membrane annotation. SLC14A1 is a multi-pass membrane protein with 10 predicted transmembrane helices.
Reason: While this is a very general term, it is not incorrect. SLC14A1 is indeed an integral membrane protein. The more specific plasma membrane annotations are also present, so this broader annotation provides general context from InterPro domain analysis.
Supporting Evidence:
file:human/SLC14A1/SLC14A1-uniprot.txt
Multi-pass membrane protein
|
|
GO:0016323
basolateral plasma membrane
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Basolateral plasma membrane localization is supported by sequence similarity to mouse UT-B, which has been shown to be restricted to the basolateral membrane in urothelium. This is consistent with the protein's role in kidney urea handling.
Reason: The basolateral localization is documented in UniProt based on similarity evidence (ISS) from mouse studies. This subcellular localization is important for the protein's physiological role in the kidney concentrating mechanism.
Supporting Evidence:
file:human/SLC14A1/SLC14A1-uniprot.txt
Basolateral cell membrane ... Restricted to the basolateral membrane in various portions of the urothelium.
file:human/SLC14A1/SLC14A1-deep-research-falcon.md
UT-B is also expressed on endothelial cells of the renal vasa recta (descending limbs), contributing to the medullary urea handling necessary for the urine-concentrating mechanism.
|
|
GO:0071918
urea transmembrane transport
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: This IEA annotation from InterPro correctly identifies urea transmembrane transport as a core biological process. It is a duplicate of the IBA annotation above but from a different evidence source.
Reason: The InterPro-derived annotation is correct and consistent with the IBA annotation and direct experimental evidence. Duplicates with different evidence codes are acceptable and provide independent support.
Supporting Evidence:
PMID:7989337
HUT11 mediates a facilitated urea transport
|
|
GO:0005372
water transmembrane transporter activity
|
IEA
GO_REF:0000107 |
REMOVE |
Summary: This annotation is incorrect and should be removed. PMID:10514515 directly demonstrates that at physiological expression levels, SLC14A1 does NOT have water transmembrane transporter activity. The paper title explicitly states: "At physiological expression levels the Kidd blood group/urea transporter protein is not a water channel."
Reason: Water transport activity is an artifact of overexpression in Xenopus oocytes. At physiological levels, the protein is selective for urea and does not transport water. This IEA annotation is propagated from Ensembl orthologs but contradicts direct experimental evidence on the human protein.
Supporting Evidence:
PMID:10514515
at physiological expression levels, the HUT11A transporter confers urea permeability but not water permeability
PMID:8997401
Both proteins allow the rapid transfer of urea but not of water.
PMID:7989337
No unidirectional movements of charged molecules, glycerol, or water were associated with HUT11 expression in oocytes.
|
|
GO:0015837
amine transport
|
TAS
Reactome:R-HSA-549127 |
REMOVE |
Summary: This annotation appears to be a misannotation. The Reactome pathway R-HSA-549127 is "SLC-mediated transport of organic cations" which involves OCT1-3 (SLC22 family), not SLC14A1. SLC14A1 is a urea transporter, not an organic cation or amine transporter. There is no experimental evidence that SLC14A1 transports amines.
Reason: This annotation is incorrect. The Reactome pathway referenced concerns organic cation transporters of the SLC22 family. SLC14A1 belongs to the SLC14 urea transporter family and has not been shown to transport amines. The Reactome pathway summary explicitly describes OCT1-3 members, not urea transporters.
Supporting Evidence:
Reactome:R-HSA-549127
The organic cation transporters comprise three SLC22 members, OCT1-3. They can transport a wide range of organic cations including weak bases.
|
|
GO:0005886
plasma membrane
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: Plasma membrane localization based on immunofluorescence data. This is consistent with UT-B being an erythrocyte membrane protein and kidney endothelial membrane protein.
Reason: IDA from immunofluorescence is appropriate evidence for plasma membrane localization. Multiple experimental studies confirm this localization.
Supporting Evidence:
PMID:7797558
The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes
|
|
GO:0005886
plasma membrane
|
IDA
PMID:10514515 At physiological expression levels the Kidd blood group/urea... |
ACCEPT |
Summary: This publication demonstrates plasma membrane localization through functional expression studies in Xenopus oocytes and by comparison to red cell membrane expression levels. The study shows that at physiological plasma membrane expression levels, the protein functions as a selective urea transporter.
Reason: PMID:10514515 provides direct evidence for plasma membrane localization through expression studies and comparison to native red cell membrane levels.
Supporting Evidence:
PMID:10514515
at plasma membrane expression levels close to the level observed in the red cell membrane
|
|
GO:0005886
plasma membrane
|
IDA
PMID:7797558 Kidd blood group and urea transport function of human erythr... |
ACCEPT |
Summary: This landmark paper identifies SLC14A1 (HUT11) as the Kidd blood group antigen carrier and demonstrates its presence on red cell membranes through immunoprecipitation and immunoblotting experiments.
Reason: The paper provides direct evidence through antibody-based detection of the protein on erythrocyte membranes. Anti-Jk3 antibody immunoprecipitates a 46-60 kDa protein from red cell membranes, and anti-HUT11 antibody detects the same component.
Supporting Evidence:
PMID:7797558
The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes, except those from Jk(a-b-) cells.
PMID:7797558
A rabbit antibody raised against the predicted NH2-terminal amino-acids of the HUT11 protein reacted on immunoblots with a 46-60-kDa component present in all human erythrocytes except those from Jk(a-b-) individuals.
|
|
GO:0015204
urea transmembrane transporter activity
|
IDA
PMID:10514515 At physiological expression levels the Kidd blood group/urea... |
ACCEPT |
Summary: This paper demonstrates urea transport activity of the physiological HUT11A variant in Xenopus oocytes. Importantly, it shows that at physiological expression levels, the protein selectively transports urea (inhibited by phloretin) but not water.
Reason: Direct assay evidence demonstrating urea transport activity with pharmacological characterization including phloretin sensitivity at physiological expression levels.
Supporting Evidence:
PMID:10514515
at plasma membrane expression levels close to the level observed in the red cell membrane, HUT11A-mediated water transport and small solutes uptake were absent and the urea transport was poorly inhibited by p-chloromercuribenzene sulfonate, but strongly inhibited by phloretin.
|
|
GO:0015204
urea transmembrane transporter activity
|
IDA
PMID:7797558 Kidd blood group and urea transport function of human erythr... |
ACCEPT |
Summary: This paper demonstrates that Jk(a-b-) red cells, which lack SLC14A1 protein, have a selective defect in urea transport capacity, providing genetic evidence that SLC14A1 is responsible for urea transport activity in erythrocytes.
Reason: Genetic loss-of-function evidence: Jk(null) individuals who lack SLC14A1 protein have defective urea transport, directly linking the protein to urea transport activity.
Supporting Evidence:
PMID:7797558
Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity, but a normal water permeability
|
|
GO:0015204
urea transmembrane transporter activity
|
IDA
PMID:7989337 Cloning and functional expression of a urea transporter from... |
ACCEPT |
Summary: This is the original cloning paper demonstrating facilitated urea transport activity of HUT11 (SLC14A1) when expressed in Xenopus oocytes. The activity was inhibited by classical urea transport inhibitors.
Reason: First direct demonstration of urea transport activity by heterologous expression. The transport showed characteristic pharmacological inhibition by phloretin and p-chloromercuribenzene sulfonate.
Supporting Evidence:
PMID:7989337
Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport that was inhibited, as described in mammalian erythrocytes, by very low concentrations of phloretin, p-chloromercuribenzene sulfonate, and urea analogues.
|
|
GO:0015204
urea transmembrane transporter activity
|
IDA
PMID:8997401 Functional differentiation of the human red blood cell and k... |
ACCEPT |
Summary: This paper provides detailed pharmacological characterization of human UT-B (HUT11) comparing it to the kidney urea transporter HUT2. Both transporters mediate rapid urea transfer but not water transport, with distinct inhibitor sensitivity profiles.
Reason: Detailed functional characterization demonstrating urea transport activity with pharmacological profiling. The study explicitly notes that HUT11 allows rapid transfer of urea but not water.
Supporting Evidence:
PMID:8997401
Both proteins allow the rapid transfer of urea but not of water. Both are inhibited by phloretin, although with different half-maximal inhibitory concentrations (IC50; 75 microM, for HUT11 and 230 microM for HUT2).
PMID:8997401
We demonstrate that thiourea diffuses through HUT11 with a Michaelis constant (Km) of 40 mM, but not through HUT2.
|
|
GO:0016323
basolateral plasma membrane
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Basolateral plasma membrane localization inferred from mouse ortholog data. This is consistent with the protein's role in kidney epithelial cells where basolateral localization is important for urea countercurrent exchange.
Reason: ISS from mouse ortholog is appropriate for subcellular localization. The basolateral localization is relevant to the protein's physiological function in kidney.
Supporting Evidence:
file:human/SLC14A1/SLC14A1-uniprot.txt
Basolateral cell membrane ... Restricted to the basolateral membrane in various portions of the urothelium.
|
|
GO:0015204
urea transmembrane transporter activity
|
TAS
Reactome:R-HSA-444126 |
ACCEPT |
Summary: The Reactome pathway correctly describes HUT11 (SLC14A1) as an erythrocyte-specific urea transporter mediating rapid urea movement across cell membranes.
Reason: The Reactome pathway accurately captures the core molecular function of SLC14A1 in urea transport, consistent with experimental evidence.
Supporting Evidence:
Reactome:R-HSA-444126
Carrier-mediated urea transport allows rapid urea movement across the cell membrane, which is particularly important in the process of urinary concentration and for rapid urea equilibrium in non-renal tissues. Two carriers exist in humans, HUT2 which is renal-specific (Olives B et al, 1996) and HUT11, which is erythrocyte-specific (Olives B et al, 1994).
|
|
GO:0005886
plasma membrane
|
IDA
PMID:19865084 Crystal structure of a bacterial homologue of the kidney ure... |
UNDECIDED |
Summary: PMID:19865084 describes the crystal structure of a bacterial urea transporter homolog (Desulfovibrio vulgaris), not human SLC14A1 directly. While the structure provides insight into the UT family architecture, this IDA for plasma membrane should not cite this paper for human SLC14A1 localization.
Reason: The citation appears misattributed. PMID:19865084 is about a bacterial homolog structure, not human SLC14A1 localization. However, the plasma membrane localization is well-supported by other references, so this may be an error in the original GO annotation citation.
Supporting Evidence:
PMID:19865084
Here we present the 2.3 A structure of a functional urea transporter from the bacterium Desulfovibrio vulgaris.
|
|
GO:0015265
urea channel activity
|
IDA
PMID:19865084 Crystal structure of a bacterial homologue of the kidney ure... |
ACCEPT |
Summary: PMID:19865084 provides structural evidence that urea transporters operate via a channel-like mechanism with a continuous membrane-spanning pore. While this study is on a bacterial homolog, the findings established that UTs function as channels rather than carriers. Recent human UT-B structures (2023-2024) confirm the conserved channel architecture. GO:0015265 (urea channel activity) may be more mechanistically precise than GO:0015204 (urea transmembrane transporter activity).
Reason: The structural evidence demonstrates a channel-like mechanism for urea permeation. While the primary citation is for a bacterial homolog, the human UT-B structure confirms the same architecture. The annotation captures the mechanistic insight that UT-B functions as a channel rather than a carrier-type transporter.
Supporting Evidence:
PMID:19865084
These results establish that the urea transporter operates by a channel-like mechanism and reveal the physical and chemical basis of urea selectivity.
file:human/SLC14A1/SLC14A1-deep-research-falcon.md
Human UTs are homotrimers; each subunit forms an independent pore with 10 transmembrane helices arranged with pseudo-C2 symmetry.
|
|
GO:0071918
urea transmembrane transport
|
IDA
PMID:19865084 Crystal structure of a bacterial homologue of the kidney ure... |
UNDECIDED |
Summary: Similar to the channel activity annotation above, this IDA cites the bacterial homolog structure paper. The paper provides mechanistic insight into urea permeation but is not direct evidence for human SLC14A1 function.
Reason: While the structural insights are relevant to understanding the UT family mechanism, this citation is for a bacterial homolog rather than direct evidence on human SLC14A1. However, urea transmembrane transport is well-supported by other IDA citations.
Supporting Evidence:
PMID:19865084
The pore contains a constricted selectivity filter that can accommodate several dehydrated urea molecules in single file.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-HSA-444126 |
ACCEPT |
Summary: The Reactome pathway describes urea transport across cell membranes, implicitly indicating plasma membrane localization for the transporter.
Reason: Consistent with extensive experimental evidence for plasma membrane localization. The Reactome description of rapid urea movement across cell membranes requires plasma membrane localization of the transporter.
Supporting Evidence:
Reactome:R-HSA-444126
Carrier-mediated urea transport allows rapid urea movement across the cell membrane
|
|
GO:0005886
plasma membrane
|
TAS
PMID:7797558 Kidd blood group and urea transport function of human erythr... |
ACCEPT |
Summary: The original paper identifying SLC14A1 as the Kidd blood group protein provides evidence for plasma membrane localization through immunoprecipitation from red cell membranes.
Reason: Consistent with the IDA annotations from the same paper. The protein was immunoprecipitated from red cell membranes by anti-Jk3 antibody.
Supporting Evidence:
PMID:7797558
The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes
|
|
GO:0005886
plasma membrane
|
TAS
PMID:7989337 Cloning and functional expression of a urea transporter from... |
ACCEPT |
Summary: The original cloning paper demonstrates expression studies showing functional urea transport, implying plasma membrane localization of the heterologously expressed protein.
Reason: The functional expression of urea transport activity requires plasma membrane localization of the expressed protein.
Supporting Evidence:
PMID:7989337
Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport
|
|
GO:0015840
urea transport
|
TAS
PMID:7989337 Cloning and functional expression of a urea transporter from... |
ACCEPT |
Summary: GO:0015840 (urea transport) is a broader term than GO:0071918 (urea transmembrane transport). Both are appropriate annotations for SLC14A1, with GO:0071918 being more specific to the transmembrane mechanism.
Reason: Urea transport is the core biological process for SLC14A1. This broader term encompasses the more specific urea transmembrane transport annotations.
Supporting Evidence:
PMID:7989337
These findings suggest that HUT11 is most likely responsible for the facilitated urea transport in human red blood cells.
|
Q: What is the physiological significance of the Jk(a)/Jk(b) polymorphism (D280N) for urea transport kinetics? The D280N variant defines the major Kidd blood group antigens but the functional impact on transport activity is not well characterized.
Q: Is there tissue-specific regulation of SLC14A1 expression and does this affect local urea handling? Expression in brain, prostate, and bladder (per HPA) suggests potential non-classical functions beyond erythrocytes and kidney.
Experiment: Compare urea transport kinetics between Jk(a) and Jk(b) variants in controlled expression systems. This would clarify whether the common D280N polymorphism affects function or is immunologically neutral.
Experiment: Investigate the reported tumor suppressor function of SLC14A1 in bladder and prostate cancer models. Recent studies suggest epigenetic silencing correlates with cancer progression; mechanistic basis is unclear.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Research report: SLC14A1 (UT‑B; Kidd/JK blood group)
Identity verification and key definitions
- Gene/protein: SLC14A1 encodes the human facilitative urea transporter UT‑B, which carries the Kidd (JK) blood group antigens on red blood cells (aliases include HUT11, JK, UT1/UT‑B1). The gene lies on chr18q11–q12, with the mature protein encoded by exons 4–10. The JK system (ISBT 009) includes antithetical JK1/JK2 antigens and JK3; absence of UT‑B yields the Jk(a−b−) “JK null” phenotype. Functionally, UT‑B mediates rapid, selective urea transport across membranes. These identities and roles are foundational for both physiology and transfusion medicine (https://doi.org/10.1016/j.htct.2023.10.004; published Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3).
Molecular function and transport mechanism
- Substrate specificity and permeation: UT‑B is a facilitative channel specialized for urea. High‑resolution structures of human UT‑B and UT‑A paralogs, together with cryo‑EM across multiple states, reveal a conserved urea recognition motif and an H‑bond transfer path that guides urea through the pore, accounting for the transporter’s very high turnover for urea. Functional assays show robust urea permeability of human UT‑B that is blockable by small‑molecule inhibitors (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; and https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
- Inhibition modes and selectivity: Multiple inhibitor classes demonstrate distinct binding modes to UTs. Competitive (e.g., 25a, ATB3), uncompetitive (CF11), and noncompetitive (HQA2) inhibitors occupy different pockets or regions in UTs; human UT‑B has been co‑resolved with a selective inhibitor (UTBinh‑14), establishing structural determinants for selectivity and enabling structure‑guided design of UT modulators (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
Cellular and tissue localization
- Erythrocytes and renal microvasculature: UT‑B is abundant on human erythrocytes, where it enables rapid equilibration of intracellular and extracellular urea. It is also expressed on endothelial cells of the renal vasa recta (descending limbs), contributing to the medullary urea handling necessary for the urine‑concentrating mechanism. These localizations underpin both its physiologic roles and its identity as the JK blood group carrier (https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3).
Physiological roles
- RBC urea equilibration: On red cells, UT‑B equilibrates urea rapidly, protecting RBCs from osmotic stress during circulation through the hyperosmotic renal medulla and other environments (https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3).
- Kidney concentrating mechanism: In the descending vasa recta endothelium, UT‑B participates in countercurrent exchange of urea, a key component of the renal medullary concentrating process. This role is supported by the established UT‑B expression pattern and the broader UT architecture and functional data from human structures (https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024; https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3, chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
Recent developments (2023–2024) and latest research
- Human structural biology advances (2023–2024): The first high‑resolution structures of human UT‑B and UT‑A family members delineate the conserved urea recognition motif and proton‑independent H‑bond relay for permeation, identify lipid associations, and map selective inhibitor binding sites (Sci Adv 2023; Nat Commun 2024). These studies provide a blueprint for rational design of UT‑targeted small molecules and deepen mechanistic understanding of urea permeation (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
- Transfusion genomics using long‑read sequencing (2024): In a routine donor cohort with paired serology and genotypes (11,972 donors), Oxford Nanopore long‑read sequencing of SLC14A1 resolved 10 unexplained JK discrepancies, uncovering two novel JK null alleles (Gly40Asp on JK01; Gly242Glu on JK02) and a previously undetected ~5 kb deletion spanning exons 9–10 of JK*01. The study shows long‑read sequencing’s ability to detect both SNVs and structural variants and to resolve haplotypes that standard methods may miss (https://doi.org/10.3390/biomedicines12010225; Jan 2024) (gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2, gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10).
- Tumor biology (2024): Multiple analyses link SLC14A1 to cancer phenotypes. Large GWAS and meta‑analyses have associated SLC14A1 (e.g., rs10775480, intron 6) with bladder cancer susceptibility; experimental studies report tumor‑suppressor‑like effects in urothelial tumors. In prostate cancer, SLC14A1 expression decreases with progression, attributed to promoter hypermethylation; lower expression/hypermethylation correlates with worse prognosis. Overexpression suppresses proliferation and metastasis while dampening CDK1/CCNB1 and mTOR/MMP‑9 signaling (https://doi.org/10.1038/s41598-024-66020-1; Jun 2024) (ma2024downregulationofslc14a1 pages 1-2).
Current applications and real‑world implementations
- Blood bank/transfusion medicine:
• Antigen carrier: SLC14A1 (UT‑B) defines the JK system; anti‑JK antibodies can cause acute or delayed hemolytic transfusion reactions. Alloimmunization is generally rare (<1%); one center reported a combined anti‑JK1/JK2 incidence of 0.05%, underscoring that while infrequent, clinically significant anti‑JK can occur and requires compatible unit selection (https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3).
• Genotyping/phenotyping: Long‑read SLC14A1 sequencing resolves genotype–phenotype discrepancies, including weak and null alleles and structural variants that evade standard assays, improving patient/donor matching and transfusion safety (https://doi.org/10.3390/biomedicines12010225; Jan 2024) (gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2, gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10, gueuning2024resolvinggenotype–phenotypediscrepanciesa pages 12-13, gueuning2024resolvinggenotype–phenotypediscrepanciesb pages 12-13).
- Drug discovery: Human UT structures with bound inhibitors (UT‑B selective and pan‑UT ligands) provide actionable templates for medicinal chemistry, with prospects for salt‑sparing diuretics via UT‑A inhibition and potential CNS/renal indications for UT‑B modulation (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
Expert opinions and analyses from authoritative sources
- Structural and mechanistic consensus: The 2023 Sci Adv study and the 2024 Nat Commun series are high‑quality, peer‑reviewed works establishing the modern consensus on UT architecture, urea recognition, permeation mechanics, and inhibitor binding—defining the mechanistic landscape for the UT family, including UT‑B (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
- Transfusion genomics practice: The 2024 Biomedicines report demonstrates how comprehensive SLC14A1 long‑read genotyping complements routine serology and short‑read assays to resolve incongruities, detect structural alleles, and guide clinical decision‑making in blood services (https://doi.org/10.3390/biomedicines12010225; Jan 2024) (gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2, gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10, gueuning2024resolvinggenotype–phenotypediscrepanciesa pages 12-13, gueuning2024resolvinggenotype–phenotypediscrepanciesb pages 12-13).
- Oncology perspective: The 2024 Scientific Reports study integrates public datasets and experiments to argue a tumor‑suppressive role for SLC14A1 in prostate cancer, mechanistically linked to suppressed CDK1/CCNB1 and mTOR axes and epigenetic silencing (promoter hypermethylation), consistent with prior associations of SLC14A1 with bladder cancer risk and tumor suppression in urothelial contexts (https://doi.org/10.1038/s41598-024-66020-1; Jun 2024) (ma2024downregulationofslc14a1 pages 1-2).
Relevant statistics and recent quantitative data
- Transfusion immunohematology: Alloimmunization to JK antigens is rare (<1% overall), with one reported combined anti‑JK1/JK2 incidence of 0.05% at a single center, emphasizing low frequency but clinical relevance (https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024) (soleimani2024slc14a1genesequencing pages 1-3).
- Long‑read donor genetics: Among 11,972 donors with both serology and genotypes, 10 unresolved JK discrepancies were fully explained by long‑read sequencing, including discovery of two novel null alleles and a ~5 kb deletion spanning exons 9–10—an SV not detected by standard methods—illustrating the yield and clinical utility of comprehensive SLC14A1 interrogation (https://doi.org/10.3390/biomedicines12010225; Jan 2024) (gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2, gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10).
Notes on regulation and pathways
- Epigenetic regulation: In prostate cancer, promoter hypermethylation reduces SLC14A1 expression; restoration suppresses proliferative and invasive programs via CDK1/CCNB1 and mTOR/MMP‑9 pathways, indicating pathway crosstalk consequential for tumor biology (https://doi.org/10.1038/s41598-024-66020-1; Jun 2024) (ma2024downregulationofslc14a1 pages 1-2).
- Pharmacologic modulation: UT‑B selective and multi‑UT inhibitors have structurally validated binding; their distinct modes (competitive/uncompetitive/noncompetitive) portend differential physiological effects and selectivity profiles for future translational applications (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2).
Conclusion and verification
- Verification against provided identity: The target is human SLC14A1 (UniProt Q13336), known as UT‑B/Kidd blood group carrier. The organism and aliases match the literature. The protein belongs to the UT/urea transporter family with characteristic 10‑TM, homotrimeric architecture and conserved urea recognition/permeation motifs consistent with urea transporter domain annotations. The literature used here aligns with these domain/family expectations, and no conflicting gene symbol usage was identified (https://doi.org/10.1126/sciadv.adg8229; Sep 2023; https://doi.org/10.1038/s41467-024-54305-y; Nov 2024; https://doi.org/10.1016/j.htct.2023.10.004; Nov 2024) (chi2023structuralcharacterizationof pages 1-2, huang2024structuralinsightsinto pages 1-2, soleimani2024slc14a1genesequencing pages 1-3).
Key references (URLs/date)
- Chi et al., Structural characterization of human urea transporters UT‑A and UT‑B and their inhibition. Science Advances. Published Sep 2023. URL: https://doi.org/10.1126/sciadv.adg8229 (chi2023structuralcharacterizationof pages 1-2, chi2023structuralcharacterizationof pages 10-11).
- Huang et al., Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters. Nature Communications. Published Nov 2024. URL: https://doi.org/10.1038/s41467-024-54305-y (huang2024structuralinsightsinto pages 1-2).
- Gueuning et al., Resolving Genotype–Phenotype Discrepancies of the Kidd Blood Group System Using Long‑Read Nanopore Sequencing. Biomedicines. Published Jan 2024. URL: https://doi.org/10.3390/biomedicines12010225 (gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2, gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10, gueuning2024resolvinggenotype–phenotypediscrepanciesa pages 12-13, gueuning2024resolvinggenotype–phenotypediscrepanciesb pages 12-13).
- Soleimani et al., SLC14A1 gene sequencing shows the JK*01W.06 allele in a JK1 patient with an anti‑JK1. Hematology, Transfusion and Cell Therapy. Published Nov 2024. URL: https://doi.org/10.1016/j.htct.2023.10.004 (soleimani2024slc14a1genesequencing pages 1-3).
- Ma et al., Down‑regulation of SLC14A1 in prostate cancer activates CDK1/CCNB1 and mTOR pathways and promotes tumor progression. Scientific Reports. Published Jun 2024. URL: https://doi.org/10.1038/s41598-024-66020-1 (ma2024downregulationofslc14a1 pages 1-2).
References
(soleimani2024slc14a1genesequencing pages 1-3): Reza Soleimani, Julien Cabo, Alex Frelik, Cécile Debry, Catherine Mbende, Jacques Delcourt, Nicolas Debortoli, Edith Renguet, Anaïs Devey, François Mullier, Jonathan Degosserie, and Laetitia Moreno Y Banuls. Slc14a1 gene sequencing shows the jk*01w.06 allele in a jk1 patient with an anti-jk1. Hematology, Transfusion and Cell Therapy, 46:S278-S283, Nov 2024. URL: https://doi.org/10.1016/j.htct.2023.10.004, doi:10.1016/j.htct.2023.10.004. This article has 3 citations.
(chi2023structuralcharacterizationof pages 1-2): Gamma Chi, Larissa Dietz, Haiping Tang, Matthew Snee, Andreea Scacioc, Dong Wang, Gavin Mckinley, Shubhashish M. M. Mukhopadhyay, Ashley C. W. Pike, Rod Chalk, Nicola A. Burgess-Brown, Jean-Pierre Timmermans, Wouter van Putte, Carol V. Robinson, and Katharina L. Dürr. Structural characterization of human urea transporters ut-a and ut-b and their inhibition. Science Advances, Sep 2023. URL: https://doi.org/10.1126/sciadv.adg8229, doi:10.1126/sciadv.adg8229. This article has 13 citations and is from a highest quality peer-reviewed journal.
(chi2023structuralcharacterizationof pages 10-11): Gamma Chi, Larissa Dietz, Haiping Tang, Matthew Snee, Andreea Scacioc, Dong Wang, Gavin Mckinley, Shubhashish M. M. Mukhopadhyay, Ashley C. W. Pike, Rod Chalk, Nicola A. Burgess-Brown, Jean-Pierre Timmermans, Wouter van Putte, Carol V. Robinson, and Katharina L. Dürr. Structural characterization of human urea transporters ut-a and ut-b and their inhibition. Science Advances, Sep 2023. URL: https://doi.org/10.1126/sciadv.adg8229, doi:10.1126/sciadv.adg8229. This article has 13 citations and is from a highest quality peer-reviewed journal.
(huang2024structuralinsightsinto pages 1-2): Shen-Ming Huang, Zhi-Zhen Huang, Lei Liu, Meng-Yao Xiong, Chao Zhang, Bo-Yang Cai, Ming-Wei Wang, Kui Cai, Ying-Li Jia, Jia-Le Wang, Ming-Hui Zhang, Yi-He Xie, Min Li, Hang Zhang, Cheng-Hao Weng, Xin Wen, Zhi Li, Ying Sun, Fan Yi, Zhao Yang, Peng Xiao, Fan Yang, Xiao Yu, Lu Tie, Bao-Xue Yang, and Jin-Peng Sun. Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters. Nature Communications, Nov 2024. URL: https://doi.org/10.1038/s41467-024-54305-y, doi:10.1038/s41467-024-54305-y. This article has 6 citations and is from a highest quality peer-reviewed journal.
(gueuning2024resolvinggenotype–phenotypediscrepancies pages 1-2): Morgan Gueuning, Gian Andri Thun, Nadine Trost, Linda Schneider, Sonja Sigurdardottir, Charlotte Engström, Naemi Larbes, Yvonne Merki, Beat M. Frey, Christoph Gassner, Stefan Meyer, and Maja P. Mattle-Greminger. Resolving genotype–phenotype discrepancies of the kidd blood group system using long-read nanopore sequencing. Biomedicines, 12:225, Jan 2024. URL: https://doi.org/10.3390/biomedicines12010225, doi:10.3390/biomedicines12010225. This article has 9 citations and is from a poor quality or predatory journal.
(gueuning2024resolvinggenotype–phenotypediscrepancies pages 9-10): Morgan Gueuning, Gian Andri Thun, Nadine Trost, Linda Schneider, Sonja Sigurdardottir, Charlotte Engström, Naemi Larbes, Yvonne Merki, Beat M. Frey, Christoph Gassner, Stefan Meyer, and Maja P. Mattle-Greminger. Resolving genotype–phenotype discrepancies of the kidd blood group system using long-read nanopore sequencing. Biomedicines, 12:225, Jan 2024. URL: https://doi.org/10.3390/biomedicines12010225, doi:10.3390/biomedicines12010225. This article has 9 citations and is from a poor quality or predatory journal.
(ma2024downregulationofslc14a1 pages 1-2): Jianbin Ma, Kaihua Xue, Yifan Jiang, Xinyang Wang, Dalin He, and Peng Guo. Down-regulation of slc14a1 in prostate cancer activates cdk1/ccnb1 and mtor pathways and promotes tumor progression. Scientific Reports, Jun 2024. URL: https://doi.org/10.1038/s41598-024-66020-1, doi:10.1038/s41598-024-66020-1. This article has 8 citations and is from a peer-reviewed journal.
(gueuning2024resolvinggenotype–phenotypediscrepanciesa pages 12-13): M Gueuning, GA Thun, N Trost, and L Schneider. Resolving genotype–phenotype discrepancies of the kidd blood group system using long-read nanopore sequencing. biomedicines 2024, 12, 225. Unknown journal, 2024.
(gueuning2024resolvinggenotype–phenotypediscrepanciesb pages 12-13): M Gueuning, GA Thun, N Trost, and L Schneider. Resolving genotype–phenotype discrepancies of the kidd blood group system using long-read nanopore sequencing. biomedicines 2024, 12, 225. Unknown journal, 2024.
id: Q13336
gene_symbol: SLC14A1
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
SLC14A1 encodes urea transporter 1 (UT-B), a facilitative urea transporter that forms the
molecular basis of the Kidd (JK) blood group system. The protein functions as a homotrimer,
with each subunit containing a membrane-spanning pore formed by 10 transmembrane helices.
UT-B enables rapid, energy-independent equilibration of urea across cell membranes via a
channel-like mechanism. It is abundantly expressed on erythrocytes where it protects red
blood cells from osmotic stress during circulation through the hyperosmotic renal medulla,
and on endothelial cells of the renal vasa recta where it contributes to the urinary
concentrating mechanism. Recent structural studies (2023-2024) have resolved the human
UT-B structure, revealing conserved urea recognition motifs and providing insight into
selective inhibitor binding. Notably, at physiological expression levels, UT-B is a
selective urea transporter and does NOT function as a water channel.
existing_annotations:
- term:
id: GO:0071918
label: urea transmembrane transport
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
This IBA annotation correctly identifies urea transmembrane transport as a core
biological process for SLC14A1. The phylogenetic inference is well-supported by
extensive experimental evidence across the urea transporter family. Multiple
publications demonstrate that SLC14A1/HUT11 mediates facilitated urea transport
in erythrocytes and kidney [PMID:7989337, PMID:7797558, PMID:8997401, PMID:10514515].
action: ACCEPT
reason: >-
Urea transmembrane transport is the primary and defining function of SLC14A1.
The protein belongs to the urea transporter family (PANTHER PTHR10464) and all
functional studies confirm this activity. The phylogenetic inference from IBA
is strongly supported by direct experimental evidence in human cells.
supported_by:
- reference_id: PMID:7989337
supporting_text: "Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport that was inhibited, as described in mammalian erythrocytes, by very low concentrations of phloretin, p-chloromercuribenzene sulfonate, and urea analogues."
- reference_id: PMID:7797558
supporting_text: "Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity"
- reference_id: file:human/SLC14A1/SLC14A1-deep-research-falcon.md
supporting_text: "UT-B is a facilitative channel specialized for urea. High-resolution structures of human UT-B and UT-A paralogs, together with cryo-EM across multiple states, reveal a conserved urea recognition motif and an H-bond transfer path that guides urea through the pore"
- term:
id: GO:0006833
label: water transport
evidence_type: IEA
original_reference_id: GO_REF:0000108
review:
summary: >-
This annotation is problematic and should be removed. While SLC14A1 can facilitate
water transport when overexpressed at unphysiological levels in oocytes, this is
an artifact of overexpression. PMID:10514515 explicitly demonstrates that at
physiological expression levels, the Kidd/urea transporter does NOT function as
a water channel. The paper title states this conclusion directly.
action: REMOVE
reason: >-
The annotation of water transport to SLC14A1 is incorrect under physiological
conditions. PMID:10514515 definitively shows that water permeability is only
observed at unphysiological overexpression levels. At plasma membrane expression
levels close to those in red cells, HUT11A-mediated water transport was absent.
Jk(a-b-) red cells that lack UT-B have normal water permeability (PMID:7797558),
further confirming water transport is not a function of this protein.
supported_by:
- reference_id: PMID:10514515
supporting_text: "at plasma membrane expression levels close to the level observed in the red cell membrane, HUT11A-mediated water transport and small solutes uptake were absent"
- reference_id: PMID:10514515
supporting_text: "These findings show that, at physiological expression levels, the HUT11A transporter confers urea permeability but not water permeability, and that the observed water permeability is a feature of the red cell urea transporter when expressed at unphysiological high levels."
- reference_id: PMID:7797558
supporting_text: "Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity, but a normal water permeability"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Plasma membrane localization is well-supported by multiple experimental studies.
SLC14A1 is a multi-pass membrane protein expressed on erythrocyte plasma membranes
and endothelial cells of the renal vasa recta [PMID:7797558, PMID:10514515].
action: ACCEPT
reason: >-
The IEA annotation is correct and corroborated by multiple IDA annotations from
experimental studies. The protein has been localized to the plasma membrane by
immunoprecipitation, immunoblotting, and functional studies in erythrocytes.
supported_by:
- reference_id: PMID:7797558
supporting_text: "A rabbit antibody raised against the predicted NH2-terminal amino-acids of the HUT11 protein reacted on immunoblots with a 46-60-kDa component present in all human erythrocytes except those from Jk(a-b-) individuals."
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Urea transmembrane transporter activity is the core molecular function of SLC14A1.
This IEA annotation is strongly supported by direct experimental evidence from
multiple publications demonstrating facilitated urea transport in Xenopus oocyte
expression systems [PMID:7989337, PMID:8997401, PMID:10514515].
action: ACCEPT
reason: >-
This is the defining molecular function of UT-B. The IEA is correct and reinforced
by multiple IDA annotations in this same annotation set.
supported_by:
- reference_id: PMID:7989337
supporting_text: "Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport"
- reference_id: PMID:8997401
supporting_text: "Both proteins allow the rapid transfer of urea but not of water."
- term:
id: GO:0016020
label: membrane
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: >-
The annotation to the generic 'membrane' term is correct but less informative than
the plasma membrane annotation. SLC14A1 is a multi-pass membrane protein with 10
predicted transmembrane helices.
action: ACCEPT
reason: >-
While this is a very general term, it is not incorrect. SLC14A1 is indeed an integral
membrane protein. The more specific plasma membrane annotations are also present,
so this broader annotation provides general context from InterPro domain analysis.
supported_by:
- reference_id: file:human/SLC14A1/SLC14A1-uniprot.txt
supporting_text: "Multi-pass membrane protein"
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Basolateral plasma membrane localization is supported by sequence similarity to
mouse UT-B, which has been shown to be restricted to the basolateral membrane in
urothelium. This is consistent with the protein's role in kidney urea handling.
action: ACCEPT
reason: >-
The basolateral localization is documented in UniProt based on similarity evidence
(ISS) from mouse studies. This subcellular localization is important for the
protein's physiological role in the kidney concentrating mechanism.
supported_by:
- reference_id: file:human/SLC14A1/SLC14A1-uniprot.txt
supporting_text: "Basolateral cell membrane ... Restricted to the basolateral membrane in various portions of the urothelium."
- reference_id: file:human/SLC14A1/SLC14A1-deep-research-falcon.md
supporting_text: "UT-B is also expressed on endothelial cells of the renal vasa recta (descending limbs), contributing to the medullary urea handling necessary for the urine-concentrating mechanism."
- term:
id: GO:0071918
label: urea transmembrane transport
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: >-
This IEA annotation from InterPro correctly identifies urea transmembrane transport
as a core biological process. It is a duplicate of the IBA annotation above but
from a different evidence source.
action: ACCEPT
reason: >-
The InterPro-derived annotation is correct and consistent with the IBA annotation
and direct experimental evidence. Duplicates with different evidence codes are
acceptable and provide independent support.
supported_by:
- reference_id: PMID:7989337
supporting_text: "HUT11 mediates a facilitated urea transport"
- term:
id: GO:0005372
label: water transmembrane transporter activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
This annotation is incorrect and should be removed. PMID:10514515 directly
demonstrates that at physiological expression levels, SLC14A1 does NOT have
water transmembrane transporter activity. The paper title explicitly states:
"At physiological expression levels the Kidd blood group/urea transporter
protein is not a water channel."
action: REMOVE
reason: >-
Water transport activity is an artifact of overexpression in Xenopus oocytes.
At physiological levels, the protein is selective for urea and does not
transport water. This IEA annotation is propagated from Ensembl orthologs
but contradicts direct experimental evidence on the human protein.
supported_by:
- reference_id: PMID:10514515
supporting_text: "at physiological expression levels, the HUT11A transporter confers urea permeability but not water permeability"
- reference_id: PMID:8997401
supporting_text: "Both proteins allow the rapid transfer of urea but not of water."
- reference_id: PMID:7989337
supporting_text: "No unidirectional movements of charged molecules, glycerol, or water were associated with HUT11 expression in oocytes."
- term:
id: GO:0015837
label: amine transport
evidence_type: TAS
original_reference_id: Reactome:R-HSA-549127
review:
summary: >-
This annotation appears to be a misannotation. The Reactome pathway R-HSA-549127
is "SLC-mediated transport of organic cations" which involves OCT1-3 (SLC22 family),
not SLC14A1. SLC14A1 is a urea transporter, not an organic cation or amine
transporter. There is no experimental evidence that SLC14A1 transports amines.
action: REMOVE
reason: >-
This annotation is incorrect. The Reactome pathway referenced concerns organic
cation transporters of the SLC22 family. SLC14A1 belongs to the SLC14 urea
transporter family and has not been shown to transport amines. The Reactome
pathway summary explicitly describes OCT1-3 members, not urea transporters.
supported_by:
- reference_id: Reactome:R-HSA-549127
supporting_text: "The organic cation transporters comprise three SLC22 members, OCT1-3. They can transport a wide range of organic cations including weak bases."
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: >-
Plasma membrane localization based on immunofluorescence data. This is consistent
with UT-B being an erythrocyte membrane protein and kidney endothelial membrane protein.
action: ACCEPT
reason: >-
IDA from immunofluorescence is appropriate evidence for plasma membrane localization.
Multiple experimental studies confirm this localization.
supported_by:
- reference_id: PMID:7797558
supporting_text: "The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:10514515
review:
summary: >-
This publication demonstrates plasma membrane localization through functional
expression studies in Xenopus oocytes and by comparison to red cell membrane
expression levels. The study shows that at physiological plasma membrane
expression levels, the protein functions as a selective urea transporter.
action: ACCEPT
reason: >-
PMID:10514515 provides direct evidence for plasma membrane localization through
expression studies and comparison to native red cell membrane levels.
supported_by:
- reference_id: PMID:10514515
supporting_text: "at plasma membrane expression levels close to the level observed in the red cell membrane"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:7797558
review:
summary: >-
This landmark paper identifies SLC14A1 (HUT11) as the Kidd blood group antigen
carrier and demonstrates its presence on red cell membranes through
immunoprecipitation and immunoblotting experiments.
action: ACCEPT
reason: >-
The paper provides direct evidence through antibody-based detection of the protein
on erythrocyte membranes. Anti-Jk3 antibody immunoprecipitates a 46-60 kDa protein
from red cell membranes, and anti-HUT11 antibody detects the same component.
supported_by:
- reference_id: PMID:7797558
supporting_text: "The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes, except those from Jk(a-b-) cells."
- reference_id: PMID:7797558
supporting_text: "A rabbit antibody raised against the predicted NH2-terminal amino-acids of the HUT11 protein reacted on immunoblots with a 46-60-kDa component present in all human erythrocytes except those from Jk(a-b-) individuals."
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: IDA
original_reference_id: PMID:10514515
review:
summary: >-
This paper demonstrates urea transport activity of the physiological HUT11A variant
in Xenopus oocytes. Importantly, it shows that at physiological expression levels,
the protein selectively transports urea (inhibited by phloretin) but not water.
action: ACCEPT
reason: >-
Direct assay evidence demonstrating urea transport activity with pharmacological
characterization including phloretin sensitivity at physiological expression levels.
supported_by:
- reference_id: PMID:10514515
supporting_text: "at plasma membrane expression levels close to the level observed in the red cell membrane, HUT11A-mediated water transport and small solutes uptake were absent and the urea transport was poorly inhibited by p-chloromercuribenzene sulfonate, but strongly inhibited by phloretin."
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: IDA
original_reference_id: PMID:7797558
review:
summary: >-
This paper demonstrates that Jk(a-b-) red cells, which lack SLC14A1 protein, have
a selective defect in urea transport capacity, providing genetic evidence that
SLC14A1 is responsible for urea transport activity in erythrocytes.
action: ACCEPT
reason: >-
Genetic loss-of-function evidence: Jk(null) individuals who lack SLC14A1 protein
have defective urea transport, directly linking the protein to urea transport activity.
supported_by:
- reference_id: PMID:7797558
supporting_text: "Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity, but a normal water permeability"
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: IDA
original_reference_id: PMID:7989337
review:
summary: >-
This is the original cloning paper demonstrating facilitated urea transport activity
of HUT11 (SLC14A1) when expressed in Xenopus oocytes. The activity was inhibited
by classical urea transport inhibitors.
action: ACCEPT
reason: >-
First direct demonstration of urea transport activity by heterologous expression.
The transport showed characteristic pharmacological inhibition by phloretin and
p-chloromercuribenzene sulfonate.
supported_by:
- reference_id: PMID:7989337
supporting_text: "Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport that was inhibited, as described in mammalian erythrocytes, by very low concentrations of phloretin, p-chloromercuribenzene sulfonate, and urea analogues."
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: IDA
original_reference_id: PMID:8997401
review:
summary: >-
This paper provides detailed pharmacological characterization of human UT-B (HUT11)
comparing it to the kidney urea transporter HUT2. Both transporters mediate rapid
urea transfer but not water transport, with distinct inhibitor sensitivity profiles.
action: ACCEPT
reason: >-
Detailed functional characterization demonstrating urea transport activity with
pharmacological profiling. The study explicitly notes that HUT11 allows rapid
transfer of urea but not water.
supported_by:
- reference_id: PMID:8997401
supporting_text: "Both proteins allow the rapid transfer of urea but not of water. Both are inhibited by phloretin, although with different half-maximal inhibitory concentrations (IC50; 75 microM, for HUT11 and 230 microM for HUT2)."
- reference_id: PMID:8997401
supporting_text: "We demonstrate that thiourea diffuses through HUT11 with a Michaelis constant (Km) of 40 mM, but not through HUT2."
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Basolateral plasma membrane localization inferred from mouse ortholog data.
This is consistent with the protein's role in kidney epithelial cells where
basolateral localization is important for urea countercurrent exchange.
action: ACCEPT
reason: >-
ISS from mouse ortholog is appropriate for subcellular localization. The basolateral
localization is relevant to the protein's physiological function in kidney.
supported_by:
- reference_id: file:human/SLC14A1/SLC14A1-uniprot.txt
supporting_text: "Basolateral cell membrane ... Restricted to the basolateral membrane in various portions of the urothelium."
- term:
id: GO:0015204
label: urea transmembrane transporter activity
evidence_type: TAS
original_reference_id: Reactome:R-HSA-444126
review:
summary: >-
The Reactome pathway correctly describes HUT11 (SLC14A1) as an erythrocyte-specific
urea transporter mediating rapid urea movement across cell membranes.
action: ACCEPT
reason: >-
The Reactome pathway accurately captures the core molecular function of SLC14A1
in urea transport, consistent with experimental evidence.
supported_by:
- reference_id: Reactome:R-HSA-444126
supporting_text: "Carrier-mediated urea transport allows rapid urea movement across the cell membrane, which is particularly important in the process of urinary concentration and for rapid urea equilibrium in non-renal tissues. Two carriers exist in humans, HUT2 which is renal-specific (Olives B et al, 1996) and HUT11, which is erythrocyte-specific (Olives B et al, 1994)."
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:19865084
review:
summary: >-
PMID:19865084 describes the crystal structure of a bacterial urea transporter
homolog (Desulfovibrio vulgaris), not human SLC14A1 directly. While the structure
provides insight into the UT family architecture, this IDA for plasma membrane
should not cite this paper for human SLC14A1 localization.
action: UNDECIDED
reason: >-
The citation appears misattributed. PMID:19865084 is about a bacterial homolog
structure, not human SLC14A1 localization. However, the plasma membrane
localization is well-supported by other references, so this may be an error
in the original GO annotation citation.
supported_by:
- reference_id: PMID:19865084
supporting_text: "Here we present the 2.3 A structure of a functional urea transporter from the bacterium Desulfovibrio vulgaris."
- term:
id: GO:0015265
label: urea channel activity
evidence_type: IDA
original_reference_id: PMID:19865084
review:
summary: >-
PMID:19865084 provides structural evidence that urea transporters operate via a
channel-like mechanism with a continuous membrane-spanning pore. While this study
is on a bacterial homolog, the findings established that UTs function as channels
rather than carriers. Recent human UT-B structures (2023-2024) confirm the
conserved channel architecture. GO:0015265 (urea channel activity) may be more
mechanistically precise than GO:0015204 (urea transmembrane transporter activity).
action: ACCEPT
reason: >-
The structural evidence demonstrates a channel-like mechanism for urea permeation.
While the primary citation is for a bacterial homolog, the human UT-B structure
confirms the same architecture. The annotation captures the mechanistic insight
that UT-B functions as a channel rather than a carrier-type transporter.
supported_by:
- reference_id: PMID:19865084
supporting_text: "These results establish that the urea transporter operates by a channel-like mechanism and reveal the physical and chemical basis of urea selectivity."
- reference_id: file:human/SLC14A1/SLC14A1-deep-research-falcon.md
supporting_text: "Human UTs are homotrimers; each subunit forms an independent pore with 10 transmembrane helices arranged with pseudo-C2 symmetry."
- term:
id: GO:0071918
label: urea transmembrane transport
evidence_type: IDA
original_reference_id: PMID:19865084
review:
summary: >-
Similar to the channel activity annotation above, this IDA cites the bacterial
homolog structure paper. The paper provides mechanistic insight into urea
permeation but is not direct evidence for human SLC14A1 function.
action: UNDECIDED
reason: >-
While the structural insights are relevant to understanding the UT family
mechanism, this citation is for a bacterial homolog rather than direct evidence
on human SLC14A1. However, urea transmembrane transport is well-supported by
other IDA citations.
supported_by:
- reference_id: PMID:19865084
supporting_text: "The pore contains a constricted selectivity filter that can accommodate several dehydrated urea molecules in single file."
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-HSA-444126
review:
summary: >-
The Reactome pathway describes urea transport across cell membranes, implicitly
indicating plasma membrane localization for the transporter.
action: ACCEPT
reason: >-
Consistent with extensive experimental evidence for plasma membrane localization.
The Reactome description of rapid urea movement across cell membranes requires
plasma membrane localization of the transporter.
supported_by:
- reference_id: Reactome:R-HSA-444126
supporting_text: "Carrier-mediated urea transport allows rapid urea movement across the cell membrane"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: PMID:7797558
review:
summary: >-
The original paper identifying SLC14A1 as the Kidd blood group protein provides
evidence for plasma membrane localization through immunoprecipitation from red
cell membranes.
action: ACCEPT
reason: >-
Consistent with the IDA annotations from the same paper. The protein was
immunoprecipitated from red cell membranes by anti-Jk3 antibody.
supported_by:
- reference_id: PMID:7797558
supporting_text: "The anti-Jk3 antibody also immunoprecipitated a protein material of 46-60 kDa from all red cell membranes"
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: PMID:7989337
review:
summary: >-
The original cloning paper demonstrates expression studies showing functional
urea transport, implying plasma membrane localization of the heterologously
expressed protein.
action: ACCEPT
reason: >-
The functional expression of urea transport activity requires plasma membrane
localization of the expressed protein.
supported_by:
- reference_id: PMID:7989337
supporting_text: "Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport"
- term:
id: GO:0015840
label: urea transport
evidence_type: TAS
original_reference_id: PMID:7989337
review:
summary: >-
GO:0015840 (urea transport) is a broader term than GO:0071918 (urea transmembrane
transport). Both are appropriate annotations for SLC14A1, with GO:0071918 being
more specific to the transmembrane mechanism.
action: ACCEPT
reason: >-
Urea transport is the core biological process for SLC14A1. This broader term
encompasses the more specific urea transmembrane transport annotations.
supported_by:
- reference_id: PMID:7989337
supporting_text: "These findings suggest that HUT11 is most likely responsible for the facilitated urea transport in human red blood cells."
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO terms.
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara.
findings: []
- id: GO_REF:0000108
title: Automatic assignment of GO terms using logical inference, based on inter-ontology links.
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods.
findings: []
- id: PMID:10514515
title: At physiological expression levels the Kidd blood group/urea transporter protein is not a water channel.
findings:
- statement: "At physiological expression levels, SLC14A1/HUT11A transports urea but NOT water. Water permeability only observed at unphysiological overexpression levels."
- statement: "Identified HUT11A as the true physiological variant (389 aa vs 391 aa for original HUT11 clone)."
- statement: "Phloretin strongly inhibits urea transport at physiological levels."
- id: PMID:19865084
title: Crystal structure of a bacterial homologue of the kidney urea transporter.
findings:
- statement: "Urea transporters form homotrimers with each subunit containing a continuous membrane-spanning pore."
- statement: "Establishes that urea transporters operate by a channel-like mechanism, not a carrier mechanism."
- statement: "Selectivity filter can accommodate dehydrated urea molecules in single file."
- id: PMID:7797558
title: Kidd blood group and urea transport function of human erythrocytes are carried by the same protein.
findings:
- statement: "SLC14A1/HUT11 is the molecular basis of the Kidd (JK) blood group system."
- statement: "Jk(a-b-) red cells lack UT-B and have defective urea transport but normal water permeability."
- statement: "Gene maps to chromosome 18q12-q21."
- id: PMID:7989337
title: Cloning and functional expression of a urea transporter from human bone marrow cells.
findings:
- statement: "First cloning of human erythrocyte urea transporter (HUT11)."
- statement: "Encodes 43 kDa protein with 63% identity to rabbit UT2."
- statement: "Mediates facilitated urea transport inhibited by phloretin and pCMBS."
- statement: "No water transport observed in oocyte expression system."
- id: PMID:8997401
title: Functional differentiation of the human red blood cell and kidney urea transporters.
findings:
- statement: "Both HUT11 and HUT2 transport urea but not water."
- statement: "Distinct pharmacological profiles: HUT11 more sensitive to phloretin and pCMBS than HUT2."
- statement: "Thiourea is a substrate for HUT11 (Km 40 mM) but not HUT2."
- id: Reactome:R-HSA-444126
title: HUT2 and HUT11 mediate urea transport in kidney and erythrocytes respectively
findings:
- statement: "HUT11 (SLC14A1) is erythrocyte-specific urea transporter."
- statement: "HUT2 (SLC14A2) is renal-specific urea transporter."
- id: Reactome:R-HSA-549127
title: SLC-mediated transport of organic cations
findings:
- statement: "This pathway describes OCT1-3 (SLC22 family), not SLC14A1."
- id: file:human/SLC14A1/SLC14A1-deep-research-falcon.md
title: Deep research report on SLC14A1
findings:
- statement: "Recent (2023-2024) human UT-B structures resolved by cryo-EM confirm homotrimeric architecture."
- statement: "Conserved urea recognition motif and H-bond transfer path identified."
- statement: "Selective inhibitors characterized with distinct binding modes."
core_functions:
- description: >-
SLC14A1 mediates facilitated urea transport across erythrocyte and kidney endothelial
cell membranes. Multiple IDA studies demonstrate urea transport activity in Xenopus
oocyte expression systems with characteristic pharmacological inhibition by phloretin.
Genetic evidence from Jk(null) individuals shows loss of urea transport capacity when
protein is absent.
molecular_function:
id: GO:0015204
label: urea transmembrane transporter activity
directly_involved_in:
- id: GO:0071918
label: urea transmembrane transport
locations:
- id: GO:0005886
label: plasma membrane
supported_by:
- reference_id: PMID:7989337
supporting_text: "Expression studies in Xenopus oocytes demonstrated that HUT11 mediates a facilitated urea transport"
- reference_id: PMID:7797558
supporting_text: "Jk(a-b-) red cells lack the Kidd/urea transport protein and have a selective defect of the urea transport capacity"
- description: >-
Structural studies demonstrate that SLC14A1 operates via a channel-like mechanism
with a continuous membrane-spanning pore, rather than alternating-access carrier
mechanism. Human UT-B structures confirm conserved channel architecture with a
selectivity filter for urea.
molecular_function:
id: GO:0015265
label: urea channel activity
directly_involved_in:
- id: GO:0071918
label: urea transmembrane transport
locations:
- id: GO:0005886
label: plasma membrane
supported_by:
- reference_id: PMID:19865084
supporting_text: "These results establish that the urea transporter operates by a channel-like mechanism"
- reference_id: file:human/SLC14A1/SLC14A1-deep-research-falcon.md
supporting_text: "Human UTs are homotrimers; each subunit forms an independent pore with 10 transmembrane helices"
proposed_new_terms: []
suggested_questions:
- question: "What is the physiological significance of the Jk(a)/Jk(b) polymorphism (D280N) for urea transport kinetics? The D280N variant defines the major Kidd blood group antigens but the functional impact on transport activity is not well characterized."
- question: "Is there tissue-specific regulation of SLC14A1 expression and does this affect local urea handling? Expression in brain, prostate, and bladder (per HPA) suggests potential non-classical functions beyond erythrocytes and kidney."
suggested_experiments:
- description: "Compare urea transport kinetics between Jk(a) and Jk(b) variants in controlled expression systems. This would clarify whether the common D280N polymorphism affects function or is immunologically neutral."
- description: "Investigate the reported tumor suppressor function of SLC14A1 in bladder and prostate cancer models. Recent studies suggest epigenetic silencing correlates with cancer progression; mechanistic basis is unclear."