SLC1A2 (EAAT2 / GLT-1) is the dominant Na+-dependent high-affinity glutamate transporter of the mammalian central nervous system. It is a homotrimeric, multi-pass plasma-membrane carrier of the dicarboxylate/amino acid:cation symporter (DAACS) family that imports L-glutamate (and also L-aspartate and D-aspartate) into the cytosol, cotransporting three Na+ and one H+ and countertransporting one K+ per transport cycle; it additionally carries a thermodynamically uncoupled chloride conductance intrinsic to its transport pore. EAAT2 is expressed chiefly by astrocytes, where it concentrates in fine perisynaptic processes, with a smaller pool in neuronal axon terminals; it is largely brain-restricted but is also present at lower levels in tissues such as perivenous hepatocytes. It performs the bulk of glutamate clearance from the synaptic cleft and extracellular space, terminating glutamatergic signalling and protecting neurons from excitotoxicity. Loss-of-function variants cause autosomal-dominant developmental and epileptic encephalopathy type 41.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0005313 L-glutamate transmembrane transporter activity | IBA GO_REF:0000033 | TOO GENERAL | Summary: Family-level IBA (node PTN000238242) asserting L-glutamate transporter activity. Correct for EAAT2, which is the defining glutamate transporter. The target appears in its own WITH/FROM because EAAT2 has direct experimental grounding for the term. Reason: True of the gene, but the more specific supported terms asserted elsewhere in this review β high-affinity L-glutamate transmembrane transporter activity (GO:0005314) and glutamate:sodium symporter activity (GO:0015501) β already entail it (GO:0005314 is a verified descendant of GO:0005313). Keep the specific terms as the core molecular function. |
| GO:0005313 L-glutamate transmembrane transporter activity | IDA PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | TOO GENERAL | Summary: Original functional cloning of human EAAT2: radiolabel uptake and voltage-clamp measurements established high-affinity L-glutamate transport (KM 48-97 uM). Reason: The claim is correct and directly measured, but the term is entailed by the more specific high-affinity transporter and glutamate:sodium symporter terms accepted as the core function. Judges the term, not this IDA row. Supporting Evidence: PMID:7521911 The affinities of the EAAT subtypes for L-glutamate were similar, with Km determinations varying from 48 to 97 microM in the mammalian cell assay |
| GO:0005313 L-glutamate transmembrane transporter activity | IEA GO_REF:0000120 | TOO GENERAL | Summary: Electronic assertion of L-glutamate transporter activity; correct. Reason: Entailed by the accepted, more specific high-affinity L-glutamate transporter (GO:0005314) and glutamate:sodium symporter (GO:0015501) terms. |
| GO:0005313 L-glutamate transmembrane transporter activity | TAS PMID:21757002 The nuclear receptor FXR regulates hepatic transport and met... | TOO GENERAL | Summary: BHF-UCL TAS from a hepatic study; EAAT2 mediates glutamate uptake in perivenous hepatocytes feeding glutamine synthesis. Reason: Correct activity but entailed by the accepted specific terms GO:0005314 and GO:0015501. Supporting Evidence: PMID:21757002 Glutamate is taken up by perivenous hepatocytes and is the main source for the synthesis of glutamine, catalyzed by glutamine synthase (GS) |
| GO:0005314 high-affinity L-glutamate transmembrane transporter activity | IDA PMID:26690923 Caveolin-1 Sensitivity of Excitatory Amino Acid Transporters... | ACCEPT | Summary: Direct electrophysiological measurement of glutamate-induced inward current in EAAT2-expressing oocytes; a core, high-affinity activity. Reason: Directly measured high-affinity L-glutamate transport is the central molecular function of EAAT2. Supporting Evidence: PMID:26690923 I Glu was observed in EAAT1-, EAAT2-, EAAT3-, or EAAT4-expressing oocytes but not in water-injected oocytes |
| GO:0005314 high-affinity L-glutamate transmembrane transporter activity | IEA GO_REF:0000107 | ACCEPT | Summary: Electronic transfer from rat GLT-1; consistent with direct human data. Reason: High-affinity L-glutamate transport is the core function and is directly demonstrated for human EAAT2. |
| GO:0005314 high-affinity L-glutamate transmembrane transporter activity | TAS Reactome:R-HSA-210404 | ACCEPT | Summary: Reactome reaction for the SLC1 high-affinity glutamate exchange; EAAT2 is a member of this high-affinity transporter set. Reason: Core high-affinity glutamate transporter activity. Supporting Evidence: Reactome:R-HSA-210404 Astrocytic SLC1As are responsible for majority of the glutamate uptake |
| GO:0005314 high-affinity L-glutamate transmembrane transporter activity | TAS Reactome:R-HSA-428015 | ACCEPT | Summary: Reactome cotransport reaction; EAAT2 is a high-affinity glutamate transporter. Reason: Core high-affinity glutamate transporter activity. Supporting Evidence: Reactome:R-HSA-428015 GLT1 is expressed mainly in the brain and is essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft |
| GO:0005515 protein binding | IPI PMID:19527721 Excitatory amino acid transporter 2 associates with phosphor... | REMOVE | Summary: IntAct IPI recording an interaction with MAPT/tau (P10636); EAAT2 was found associated with phosphorylated tau in neurofibrillary tangles of tauopathic brains. Reason: Bare GO:0005515 protein binding is uninformative and is removed per the protein-binding policy. Removal does not dispute the reported tau association; it carries no molecular-function information for EAAT2. Supporting Evidence: PMID:19527721 excitatory amino acid transporter 2 (EAAT2) preferentially interacted with phosphorylated tau and was localized in neurofibrillary tangles |
| GO:0005515 protein binding | IPI PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... | REMOVE | Summary: IntAct IPI recording a yeast-two-hybrid/interactome interaction with HTT (P42858, huntingtin) from a neurodegenerative-disease interactome map. Reason: Bare GO:0005515 protein binding is uninformative and is removed per the protein-binding policy. The reported HTT interaction is retained in the record but conveys no molecular-function information for EAAT2. |
| GO:0005886 plasma membrane | EXP PMID:14506254 Glutamate modifies ion conduction and voltage-dependent gati... | ACCEPT | Summary: Whole-cell patch clamp of EAAT2 at the surface of transfected mammalian cells; the transporter functions at the plasma membrane. Reason: Plasma membrane is the core functional location of EAAT2. Supporting Evidence: PMID:14506254 a stoichiometrically coupled transport of glutamate, Na+, K+, and H+, and a pore-mediated anion conductance |
| GO:0005886 plasma membrane | EXP PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | ACCEPT | Summary: EAAT2 assayed as a surface transporter in transfected cells and oocytes. Reason: Core plasma-membrane location. |
| GO:0005886 plasma membrane | IBA GO_REF:0000033 | ACCEPT | Summary: Family IBA placing transporter activity at the plasma membrane; agrees with direct human data. Reason: Core plasma-membrane location where EAAT2 is active. |
| GO:0005886 plasma membrane | IEA GO_REF:0000120 | ACCEPT | Summary: Electronic plasma-membrane assignment; correct. Reason: Core plasma-membrane location. |
| GO:0005886 plasma membrane | IMP PMID:15265858 A trimeric quaternary structure is conserved in bacterial an... | ACCEPT | Summary: Functional/biochemical study of surface-expressed hEAAT2 trimers. Reason: Core plasma-membrane location. |
| GO:0005886 plasma membrane | IMP PMID:26690923 Caveolin-1 Sensitivity of Excitatory Amino Acid Transporters... | ACCEPT | Summary: Surface transport current measured at the plasma membrane of EAAT2-expressing oocytes. Reason: Core plasma-membrane location. |
| GO:0005886 plasma membrane | TAS Reactome:R-HSA-210404 | ACCEPT | Summary: Reactome places the SLC1 glutamate-exchange reaction at the plasma membrane. Reason: Core plasma-membrane location. |
| GO:0005886 plasma membrane | TAS Reactome:R-HSA-428015 | ACCEPT | Summary: Reactome cotransport reaction located at the plasma membrane. Reason: Core plasma-membrane location. |
| GO:0006750 glutathione biosynthetic process | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: Electronic transfer from rat GLT-1, presumably via cysteine uptake providing a glutathione precursor. Reason: EAAT2 performs no enzymatic step of glutathione biosynthesis; at most it supplies a precursor (cysteine), and cysteine transport is a minor, promiscuous activity of EAAT2 (EAAT3/EAAC1 is the dedicated neuronal cysteine/glutathione-linked transporter). Supplying a substrate is not participation in the biosynthetic process. |
| GO:0006836 neurotransmitter transport | IEA GO_REF:0000117 | TOO GENERAL | Summary: ARBA electronic assertion that EAAT2 transports a neurotransmitter (glutamate). Reason: Correct but entailed by the accepted, more specific neurotransmitter reuptake (GO:0098810) and L-glutamate import across plasma membrane (GO:0098712). |
| GO:0006836 neurotransmitter transport | TAS Reactome:R-HSA-210500 | TOO GENERAL | Summary: Reactome glutamate neurotransmitter release cycle; EAAT2 provides the uptake step. Reason: Entailed by the accepted neurotransmitter reuptake (GO:0098810) term, which captures the specific role. |
| GO:0006865 amino acid transport | TAS Reactome:R-HSA-9958863 | TOO GENERAL | Summary: Reactome SLC-mediated amino acid transport; EAAT2 is an amino-acid transporter. Reason: Broad parent entailed by the accepted specific processes L-glutamate import across plasma membrane (GO:0098712) and L-aspartate import (GO:0140009). |
| GO:0007268 chemical synaptic transmission | TAS PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | KEEP AS NON CORE | Summary: EAAT2-mediated glutamate reuptake terminates the postsynaptic action of glutamate and shapes glutamatergic transmission. Reason: EAAT2 participates in the synaptic-transmission cycle through the reuptake/clearance step rather than performing transmission itself. The role is real but peripheral to the core transport activity; the specific capture is neurotransmitter reuptake at the glutamatergic synapse. Supporting Evidence: PMID:7521911 Reuptake plays an important role in regulating synaptic and extracellular concentrations of glutamate. |
| GO:0008509 monoatomic anion transmembrane transporter activity | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Captures the thermodynamically uncoupled chloride conductance intrinsic to the EAAT transport pore. Reason: EAAT2 genuinely conducts a Cl- current not coupled to amino-acid transport, a real biophysical property but secondary to its glutamate-transport function. Supporting Evidence: file:human/SLC1A2/SLC1A2-uniprot.txt flux that is not coupled to amino acid transport |
| GO:0009986 cell surface | IDA PMID:21399631 Flotillin-1 is essential for PKC-triggered endocytosis and m... | KEEP AS NON CORE | Summary: EAAT2 detected at the cell surface and shown to undergo PKC-triggered, flotillin-1-dependent internalization. Reason: Cell surface is a coarser, correct localization; the precise core location is plasma membrane (GO:0005886). Supporting Evidence: PMID:21399631 required for PKC-regulated internalization of members of two different NTT families, the DA transporter (DAT) and the glial glutamate transporter EAAT2 |
| GO:0015175 neutral L-amino acid transmembrane transporter activity | IBA GO_REF:0000033 | MARK AS OVER ANNOTATED | Summary: Family IBA; the node spans both the acidic-amino-acid EAATs and the neutral-amino-acid ASCT members (e.g. Q15758/ASCT2). Reason: EAAT2 is a high-affinity acidic (glutamate/aspartate) amino-acid transporter; neutral L-amino acid transport is the characterized function of the ASCT paralogs on this shared node, not of EAAT2. The term reflects family-level inclusion rather than EAAT2's own activity. Propagation Review Root cause: TERM SCOPING PROBLEM Failure modes: ROLE CONFLATION Sources checked: PANTHER:PTN000238242 SUPPORTS SOURCE BUT NOT TARGET Node spans both the acidic-amino-acid EAATs and the neutral-amino-acid ASCT transporters (e.g. SLC1A5/ASCT2, Q15758). Neutral L-amino acid transporter activity is characterized for the ASCT members, not for the EAAT2 subfamily, whose substrates are glutamate/aspartate. |
| GO:0015293 symporter activity | IEA GO_REF:0000002 | TOO GENERAL | Summary: InterPro2GO electronic assertion of symporter activity. Reason: Correct mechanism, but entailed by the accepted, more specific glutamate:sodium symporter activity (GO:0015501), a verified descendant. |
| GO:0015501 glutamate:sodium symporter activity | IBA GO_REF:0000033 | ACCEPT | Summary: Family IBA asserting Na+-coupled glutamate symport; the mechanistically precise core activity, grounded in direct human data (target in WITH/FROM). Reason: Na+-coupled glutamate symport is the defining molecular function of EAAT2 and the right level of specificity. Supporting Evidence: file:human/SLC1A2/SLC1A2-uniprot.txt Functions as a symporter that transports one amino acid molecule |
| GO:0015501 glutamate:sodium symporter activity | IDA PMID:15265858 A trimeric quaternary structure is conserved in bacterial an... | ACCEPT | Summary: Glutamate uptake currents of the inducibly expressed hEAAT2 correlate with the amount of trimeric transporter. Reason: Direct evidence for the core Na+-coupled glutamate transport activity. Supporting Evidence: PMID:15265858 the glutamate uptake currents correlate to the amount of trimeric transporters |
| GO:0015501 glutamate:sodium symporter activity | IEA GO_REF:0000120 | ACCEPT | Summary: Electronic assertion of glutamate:sodium symport; correct. Reason: Core Na+-coupled glutamate symport activity. |
| GO:0015804 neutral amino acid transport | IEA GO_REF:0000108 | MARK AS OVER ANNOTATED | Summary: Inter-ontology inference from the neutral L-amino acid transporter activity. Reason: Inherits the over-annotation of GO:0015175: EAAT2 is an acidic-amino-acid transporter, and neutral amino acid transport belongs to the ASCT paralogs. |
| GO:0015813 L-glutamate transmembrane transport | IDA PMID:26690923 Caveolin-1 Sensitivity of Excitatory Amino Acid Transporters... | TOO GENERAL | Summary: Direct measurement of L-glutamate transport by EAAT2. Reason: Correct and directly shown, but entailed by the accepted, more specific L-glutamate import across plasma membrane (GO:0098712), a verified descendant. |
| GO:0016020 membrane | IEA GO_REF:0000120 | MODIFY | Summary: Generic membrane localization from electronic methods. Reason: EAAT2 is a plasma-membrane transporter; the generic membrane term should be refined to plasma membrane (GO:0005886), which the gene already carries with direct evidence. Proposed replacements: plasma membrane |
| GO:0016020 membrane | TAS PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | MODIFY | Summary: Early traceable membrane assignment from the cloning paper. Reason: Refine the generic membrane term to the supported, more specific plasma membrane (GO:0005886). Proposed replacements: plasma membrane |
| GO:0030424 axon | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Reflects the minority neuronal EAAT2 pool localized to axons/axon terminals. Reason: Axonal localization is real but a minority pool; the dominant, core localization is astrocytic perisynaptic plasma membrane. Supporting Evidence: PMID:21258616 In both astrocytic processes and axon terminals, most EAAT2a is perisynaptic |
| GO:0030673 axolemma | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Axonal plasma membrane (axolemma) localization of the neuronal EAAT2 pool. Reason: Consistent with the minority axonal pool; peripheral to the core astrocytic localization. |
| GO:0031982 vesicle | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Generic vesicle localization, consistent with trafficking/endocytosis of EAAT2. Reason: Compatible with the transporter's trafficking (surface delivery and PKC-/flotillin-regulated endocytosis) but uninformative about its core function. |
| GO:0033229 L-cysteine transmembrane transporter activity | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: Electronic transfer from rat GLT-1 asserting cysteine transport. Reason: EAAT2 can transport cysteine only weakly/promiscuously; the dedicated cysteine transporter in the family is EAAT3/EAAC1. This is not an evolved function of EAAT2. |
| GO:0042734 presynaptic membrane | IDA PMID:21258616 Cellular and Synaptic Localization of EAAT2a in Human Cerebr... | KEEP AS NON CORE | Summary: SynGO immunogold EM in human neocortex: a fraction (~14-17%) of EAAT2 is in axon terminals, perisynaptic to the active zone. Reason: The presynaptic (neuronal axon-terminal) pool is real but minority; EAAT2's core activity is in astrocytic perisynaptic processes. Supporting Evidence: PMID:21258616 In both astrocytic processes and axon terminals, most EAAT2a is perisynaptic |
| GO:0044297 cell body | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Cell-body (soma) localization transferred electronically from the rat ortholog. Reason: Somatic localization is peripheral to the core perisynaptic function. |
| GO:0044297 cell body | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: ISS cell-body localization from a mammalian SLC1 ortholog (P31596). Reason: Peripheral localization; consistent with but not central to function. |
| GO:0044297 cell body | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: ISS cell-body localization from rat GLT-1. Reason: Peripheral localization. |
| GO:0044306 neuron projection terminus | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Neuron-projection terminus (axon terminal) localization of the neuronal EAAT2 pool. Reason: Consistent with the minority axon-terminal pool; peripheral to the core astrocytic localization. Supporting Evidence: PMID:21258616 In both astrocytic processes and axon terminals, most EAAT2a is perisynaptic |
| GO:0045121 membrane raft | IDA PMID:20193040 Increased expression of cholesterol 24S-hydroxylase results ... | KEEP AS NON CORE | Summary: EAAT2 is directly shown to reside in cholesterol-rich lipid raft microdomains of the plasma membrane; raft association is disrupted in Alzheimer brain. Reason: A real plasma-membrane subdomain localization relevant to regulation, but peripheral to the core transport function. Supporting Evidence: PMID:20193040 EAAT2 is associated with lipid raft microdomains of the plasma membrane |
| GO:0045121 membrane raft | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Electronic transfer of raft localization from rat GLT-1. Reason: Consistent with direct human raft-localization data; peripheral to core function. |
| GO:0045121 membrane raft | ISS PMID:20193040 Increased expression of cholesterol 24S-hydroxylase results ... | KEEP AS NON CORE | Summary: ISS raft localization based on the rat ortholog from the same study. Reason: Peripheral plasma-membrane subdomain localization. Supporting Evidence: PMID:20193040 EAAT2 is associated with lipid raft microdomains of the plasma membrane |
| GO:0045202 synapse | IEA GO_REF:0000107 | KEEP AS NON CORE | Summary: Generic synapse localization; EAAT2 concentrates perisynaptically. Reason: Correct but broad; the informative capture is glutamatergic synapse (GO:0098978) and astrocyte perisynaptic processes. |
| GO:0070207 protein homotrimerization | IDA PMID:15265858 A trimeric quaternary structure is conserved in bacterial an... | ACCEPT | Summary: Blue-native PAGE, concatemer analysis and cross-linking show hEAAT2 assembles as a homotrimer of three identical subunits. Reason: Homotrimerization is the directly demonstrated, functionally required quaternary assembly of EAAT2. Supporting Evidence: PMID:15265858 assembled as trimers composed of three identical subunits |
| GO:0070207 protein homotrimerization | IDA PMID:15483603 Structure of a glutamate transporter homologue from Pyrococc... | ACCEPT | Summary: Crystal structure of the archaeal homolog GltPh shows a bowl-shaped trimer; cited by UniProt for the conserved trimeric assembly of EAAT2. Reason: Supports the homotrimeric assembly conserved across the family and directly demonstrated for human EAAT2. Supporting Evidence: PMID:15483603 The transporter is a bowl-shaped trimer |
| GO:0070633 transepithelial transport | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: ISS from the bovine ortholog (F1MUJ6) asserting transepithelial transport. Reason: EAAT2 is a glial/neuronal glutamate uptake transporter; it is not an epithelial transcellular carrier. The claim does not hold for the characterized human brain function and rests on an ortholog transfer. |
| GO:0070778 L-aspartate transmembrane transport | IBA GO_REF:0000033 | TOO GENERAL | Summary: Family IBA for L-aspartate transport; EAAT2 does transport L-aspartate. Reason: Correct, but entailed by the accepted, more specific L-aspartate import across plasma membrane (GO:0140009), a verified descendant. |
| GO:0070778 L-aspartate transmembrane transport | ISS GO_REF:0000024 | TOO GENERAL | Summary: ISS L-aspartate transport from the bovine ortholog. Reason: Entailed by the accepted L-aspartate import across plasma membrane (GO:0140009). |
| GO:0070779 D-aspartate import across plasma membrane | IDA PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | KEEP AS NON CORE | Summary: EAAT2 directly transports D-aspartate (KM 13-54 uM), a stereoisomer substrate often used as a transport tracer. Reason: D-aspartate is a genuine but non-canonical substrate; the physiologically central cargo is L-glutamate (and L-aspartate). Supporting Evidence: file:human/SLC1A2/SLC1A2-uniprot.txt D-aspartate(out) + K(+)(in) + 3 Na(+)(out) + H(+)(out) |
| GO:0071314 cellular response to cocaine | IEA GO_REF:0000107 | MARK AS OVER ANNOTATED | Summary: Electronic transfer from rat GLT-1, reflecting regulation of EAAT2 expression/activity in cocaine/addiction models. Reason: This captures a stimulus regulating EAAT2 rather than a function EAAT2 executes; it is not a core activity of the human protein. |
| GO:0090461 intracellular glutamate homeostasis | TAS PMID:21757002 The nuclear receptor FXR regulates hepatic transport and met... | KEEP AS NON CORE | Summary: Hepatic uptake of glutamate by EAAT2 contributes to intracellular glutamate levels feeding glutamine synthesis in perivenous hepatocytes. Reason: A downstream consequence of the import activity; the core capture is L-glutamate import across the plasma membrane. Supporting Evidence: PMID:21757002 Glutamate is taken up by perivenous hepatocytes and is the main source for the synthesis of glutamine, catalyzed by glutamine synthase (GS) |
| GO:0097449 astrocyte projection | IEA GO_REF:0000107 | ACCEPT | Summary: Astrocyte-process localization; EAAT2 is the dominant astrocytic glutamate transporter concentrated in fine perisynaptic astrocytic processes. Reason: Astrocytic perisynaptic processes are the principal site of EAAT2 function; this is a core location. Supporting Evidence: PMID:21258616 In both astrocytic processes and axon terminals, most EAAT2a is perisynaptic |
| GO:0097449 astrocyte projection | ISS GO_REF:0000024 | ACCEPT | Summary: ISS astrocyte-process localization from a mammalian ortholog. Reason: Core astrocytic perisynaptic localization, agreeing with direct human data. |
| GO:0097449 astrocyte projection | ISS GO_REF:0000024 | ACCEPT | Summary: ISS astrocyte-process localization from rat GLT-1. Reason: Core astrocytic perisynaptic localization. |
| GO:0098656 monoatomic anion transmembrane transport | IEA GO_REF:0000108 | KEEP AS NON CORE | Summary: Process counterpart of the uncoupled chloride conductance. Reason: The uncoupled Cl- flux is a genuine secondary biophysical property of the EAAT pore, peripheral to glutamate transport. Supporting Evidence: file:human/SLC1A2/SLC1A2-uniprot.txt flux that is not coupled to amino acid transport |
| GO:0098657 import into cell | IEA GO_REF:0000117 | TOO GENERAL | Summary: Broad ARBA assertion that EAAT2 imports its substrate into the cell. Reason: Entailed by the accepted, specific L-glutamate import across plasma membrane (GO:0098712), a verified descendant. |
| GO:0098712 L-glutamate import across plasma membrane | IBA GO_REF:0000033 | ACCEPT | Summary: Family IBA (node PTN004328784) for glutamate import across the plasma membrane; the core biological process of EAAT2, with the target itself among the experimental sources. Reason: Clearance of extracellular glutamate by import across the plasma membrane is EAAT2's central physiological role. |
| GO:0098712 L-glutamate import across plasma membrane | IDA PMID:15265858 A trimeric quaternary structure is conserved in bacterial an... | ACCEPT | Summary: Direct glutamate-uptake currents measured for surface-expressed hEAAT2. Reason: Core glutamate import process, directly demonstrated. Supporting Evidence: PMID:15265858 the glutamate uptake currents correlate to the amount of trimeric transporters |
| GO:0098712 L-glutamate import across plasma membrane | IDA PMID:26690923 Caveolin-1 Sensitivity of Excitatory Amino Acid Transporters... | ACCEPT | Summary: Glutamate-induced inward transport current directly measured for EAAT2. Reason: Core glutamate import process. Supporting Evidence: PMID:26690923 I Glu was observed in EAAT1-, EAAT2-, EAAT3-, or EAAT4-expressing oocytes but not in water-injected oocytes |
| GO:0098712 L-glutamate import across plasma membrane | IDA PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | ACCEPT | Summary: Radiolabel glutamate uptake directly measured for cloned human EAAT2. Reason: Core glutamate import process, established at cloning. Supporting Evidence: PMID:7521911 Reuptake plays an important role in regulating synaptic and extracellular concentrations of glutamate. |
| GO:0098712 L-glutamate import across plasma membrane | IEA GO_REF:0000107 | ACCEPT | Summary: Electronic transfer of the glutamate-import process from rat GLT-1. Reason: Core glutamate import process. |
| GO:0098712 L-glutamate import across plasma membrane | IGI PMID:20193040 Increased expression of cholesterol 24S-hydroxylase results ... | ACCEPT | Summary: Genetic interaction with CYP46A1 (Q9WVK8): increasing cholesterol 24S-hydroxylase lowers membrane cholesterol, dissociates EAAT2 from rafts and reduces glutamate uptake. Reason: Supports that EAAT2-mediated glutamate import depends on its raft localization; reinforces the core import process. Supporting Evidence: PMID:20193040 the dissociation of EAAT2 from lipid rafts and the loss of EAAT2 and associated glutamate uptake function |
| GO:0098712 L-glutamate import across plasma membrane | TAS PMID:21757002 The nuclear receptor FXR regulates hepatic transport and met... | ACCEPT | Summary: Hepatic glutamate uptake across the plasma membrane via EAAT2. Reason: Core glutamate import process, in a non-neural tissue context. Supporting Evidence: PMID:21757002 Glutamate is taken up by perivenous hepatocytes and is the main source for the synthesis of glutamine, catalyzed by glutamine synthase (GS) |
| GO:0098796 membrane protein complex | IDA PMID:20193040 Increased expression of cholesterol 24S-hydroxylase results ... | KEEP AS NON CORE | Summary: EAAT2 detected as part of a membrane protein complex (consistent with its homotrimeric, raft-associated assembly). Reason: Generic complex membership; the specific, informative assembly is the EAAT2 homotrimer (captured by GO:0070207 protein homotrimerization). |
| GO:0098796 membrane protein complex | ISS GO_REF:0000024 | KEEP AS NON CORE | Summary: ISS membrane-protein-complex membership from a mammalian ortholog. Reason: Generic complex membership; informative capture is the homotrimer (GO:0070207). |
| GO:0098810 neurotransmitter reuptake | IEA GO_REF:0000107 | ACCEPT | Summary: EAAT2 performs reuptake of released glutamate, the specific process role underlying its contribution to synaptic transmission. Reason: Glutamate reuptake/clearance is a core biological-process role of EAAT2. Supporting Evidence: Reactome:R-HSA-428015 GLT1 is expressed mainly in the brain and is essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft |
| GO:0098978 glutamatergic synapse | IEA GO_REF:0000107 | ACCEPT | Summary: EAAT2 is active at glutamatergic synapses, clearing released glutamate from the cleft; it concentrates in perisynaptic astrocytic (and some axonal) membrane. Reason: The glutamatergic synapse is the principal site where EAAT2 acts; a core functional location. Supporting Evidence: PMID:21258616 In both astrocytic processes and axon terminals, most EAAT2a is perisynaptic |
| GO:0140009 L-aspartate import across plasma membrane | IDA PMID:7521911 Functional comparisons of three glutamate transporter subtyp... | ACCEPT | Summary: EAAT2 directly imports L-aspartate (KM ~7 uM in oocytes), a physiological co-substrate transported by the same Na+-coupled mechanism. Reason: L-aspartate is a genuine physiological substrate of EAAT2 (the glutamate/aspartate transporter), imported across the plasma membrane. Supporting Evidence: file:human/SLC1A2/SLC1A2-uniprot.txt mediates the uptake of L-glutamate and also L-aspartate and D-aspartate |
| GO:0150104 transport across blood-brain barrier | ISS GO_REF:0000024 | MARK AS OVER ANNOTATED | Summary: ISS from the bovine ortholog asserting transport across the blood-brain barrier. Reason: EAAT2 is an astrocytic/neuronal glutamate uptake transporter, not an endothelial carrier that moves solutes transcellularly across the blood-brain barrier. The claim rests on an ortholog transfer and is not supported for the characterized human function. |
| GO:0150104 transport across blood-brain barrier | NAS PMID:26590417 Establishment and Dysfunction of the Blood-Brain Barrier. | MARK AS OVER ANNOTATED | Summary: NAS citing a general blood-brain-barrier review; the cited paper does not mention EAAT2/SLC1A2 or glutamate transport. Reason: The cited review contains no EAAT2/glutamate-transporter content, and EAAT2 is not a transcellular blood-brain-barrier transporter. Over-annotation. |
| GO:0150104 transport across blood-brain barrier | NAS PMID:30280653 Blood-Brain Barrier: From Physiology to Disease and Back. | MARK AS OVER ANNOTATED | Summary: NAS citing a general blood-brain-barrier review; the cited paper does not mention EAAT2/SLC1A2 or glutamate transport. Reason: No EAAT2/glutamate-transporter content in the cited review; EAAT2 is a glial uptake transporter, not a transcellular BBB carrier. Over-annotation. |
| GO:1903712 L-cysteine transmembrane transport | IEA GO_REF:0000108 | MARK AS OVER ANNOTATED | Summary: Inter-ontology inference from the L-cysteine transporter activity. Reason: Inherits the over-annotation of GO:0033229: cysteine transport is a minor, promiscuous activity of EAAT2, not an evolved function (EAAT3/EAAC1 is the dedicated cysteine transporter). |
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Download this section (compressed HTML)Q: What are the distinct physiological roles and regulation of the EAAT2 astrocytic pool versus the smaller neuronal (axon-terminal) pool at glutamatergic synapses?
Q: How do the DEE41 variants (G82R, L85P, P289R) mechanistically impair transport or trafficking, and do they act by dominant-negative oligomerization with wild-type EAAT2?
Experiment: Cell-type-specific conditional knockout/knock-in of SLC1A2 (astrocyte vs neuron drivers) with synaptic glutamate imaging (iGluSnFR) to quantify the contribution of each pool to cleft glutamate clearance.
Experiment: Electrophysiological and radiotracer-uptake characterization of DEE41 mutant EAAT2 expressed alone and co-expressed with wild-type to test for dominant-negative effects on the homotrimer, combined with cryo-EM of mutant trimers.
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