id: Q9P2M4
gene_symbol: TBC1D14
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: 'TBC1D14 is a TBC (Tre-2/Bub2/Cdc16) domain protein of the Rab GTPase-activating protein
  family. It is a peripheral membrane protein found on Rab11- and transferrin-receptor-positive recycling
  endosomes and on the Golgi apparatus, and it shifts towards the Golgi on amino-acid starvation. It keeps
  the TBC catalytic arginine and glutamine, but recombinant TBC1D14 has no detectable GAP activity towards
  47 Rabs, including Rab11, which it binds in the GTP-bound form. It acts instead as a Rab11 effector
  and adaptor: active Rab11 recruits it to recycling endosomes, and an N-terminal TRAPP-binding region
  (residues ~120-223) binds the TRAPPIII complex through TRAPPC8. This bridge supports TRAPP-dependent
  RAB1 activation and a constitutive transport step from peripheral recycling endosomes to the early Golgi
  that maintains the cycling pool of ATG9. Through this route TBC1D14 regulates starvation-induced autophagosome
  formation; its depletion increases starvation-induced LC3 lipidation, and its overexpression tubulates
  recycling endosomes and blocks autophagosome formation. It also binds the autophagy kinase ULK1, but
  its effect on ATG9 traffic is ULK1-independent.'
alternative_products:
- name: '1'
  id: Q9P2M4-1
- name: '2'
  id: Q9P2M4-2
  sequence_note: VSP_041460, VSP_041461
existing_annotations:
- term:
    id: GO:0005096
    label: GTPase activator activity
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  supporting_entities:
  - FB:FBgn0038855
  - FB:FBgn0262740
  - MGI:MGI:1913937
  - MGI:MGI:2144695
  - MGI:MGI:2385326
  - PANTHER:PTN000537561
  - SGD:S000002393
  - SGD:S000003332
  - SGD:S000005237
  - SGD:S000005472
  - SGD:S000005596
  - SGD:S000006170
  - UniProtKB:O43147
  - UniProtKB:O60447
  - UniProtKB:Q2NKQ1
  - UniProtKB:Q3MII6
  - UniProtKB:Q4KMP7
  - UniProtKB:Q8IYX1
  - UniProtKB:Q8TBP0
  - UniProtKB:Q92738
  - UniProtKB:Q96CN4
  - UniProtKB:Q96HU1
  - UniProtKB:Q9BXI6
  - UniProtKB:Q9BYX2
  - UniProtKB:Q9Y2I9
  - WB:WBGene00007167
  - WB:WBGene00022880
  - dictyBase:DDB_G0276119
  - dictyBase:DDB_G0280955
  review:
    summary: IBA GTPase activator activity propagated from the family-root PAINT node PTN000537561 (PTHR47219),
      which is seeded by catalytically active TBC RabGAPs from yeast to human; TBC1D14 is not among the
      seeds.
    action: MARK_AS_OVER_ANNOTATED
    reason: 'TBC1D14 sits inside PTHR47219 and keeps the TBC arginine finger (R472) and glutamine finger
      (Q508), so the root-node inference is phylogenetically reasonable. However, there is target-specific
      negative evidence: recombinant TBC1D14 showed no GAP activity against a panel of 47 Rabs, including
      its binding partner Rab11, and the Golgi/Shiga-toxin and autophagy effects of overexpression do
      not depend on the catalytic arginine (the R472A mutant still inhibits LC3 lipidation; the inactive
      point mutant blocks Shiga toxin transport). The TBC1D14-specific PAINT nodes (PTN000538677, PTN008586039),
      which are seeded by Q9P2M4 itself, carry location and autophagosome-assembly terms but no GAP term.
      Current evidence supports TBC1D14 acting as a Rab11 effector/TRAPP adaptor, not as a GAP. The data
      do not rule out GAP activity on an untested substrate, so this is flagged as over-annotation rather
      than removed.'
    supported_by:
    - &id016
      reference_id: PMID:22613832
      supporting_text: We then performed a GAP assay screen using a panel of 47 Rabs loaded with [32P]GTP
        but were unable to detect GAP activity with either recombinant GST-TBC1D14
    - reference_id: PMID:22613832
      supporting_text: supporting the data that TBC1D14 has no GAP activity
    - reference_id: Reactome:R-HSA-8854759
      supporting_text: TBC1D14 does not have the GAP activity and may function as Rab11 effector.
    - &id010
      reference_id: PMID:17562788
      supporting_text: However, these effects were not caused by Rab inactivation because the inactive
        point mutant gave a similar phenotype
    propagation_review:
      root_cause: PROPAGATION_BAD
      failure_modes:
      - FUNCTIONAL_DIVERGENCE
      source_entities:
      - source_id: PANTHER:PTN000537561
        comment: Family-root IBD for GTPase activator activity, seeded by catalytically active TBC RabGAPs
          from several kingdoms. TBC1D14 descends from it but is not a seed.
        source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
      - source_id: PANTHER:PTN000538677
        comment: TBC1D14-clade node seeded by Q9P2M4; PAINT placed only location terms here, no GAP term.
        source_status: NOT_RELEVANT
      - source_id: UniProtKB:Q9P2M4
        comment: Target. Recombinant protein lacked detectable GAP activity on 47 Rabs; catalytic residues
          R472/Q508 are retained, so loss is functional rather than a residue substitution.
        source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:22613832
  qualifier: enables
  supporting_entities:
  - UniProtKB:O75385
  review:
    summary: IPI with ULK1 (Longatti 2012; yeast two-hybrid and co-IP mapped to the TBC domain).
    action: MODIFY
    reason: The interaction is real and reproducible, but bare protein binding is uninformative. ULK1
      is a protein kinase, and the same paper already supports GO:0019901 protein kinase binding, which
      the gene carries.
    supported_by:
    - &id007
      reference_id: PMID:22613832
      supporting_text: A yeast two-hybrid assay revealed an interaction between TBC1D14 and ULK1
    - &id008
      reference_id: PMID:22613832
      supporting_text: In HEK293A cells, we could detect an interaction between the TBC domain of TBC1D14
        and HA-ULK1 by coimmunoprecipitation
    proposed_replacement_terms:
    - id: GO:0019901
      label: protein kinase binding
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:22613832
  qualifier: enables
  supporting_entities:
  - UniProtKB:Q15907
  review:
    summary: IPI with RAB11B (Longatti 2012). TBC1D14 binds activated (GTP-bound) Rab11, which recruits
      it to recycling endosomes.
    action: MODIFY
    reason: Bare protein binding is uninformative. The partner is a Rab small GTPase and the binding is
      to the active form, so GO:0031267 small GTPase binding is the informative MF. Binding is not accompanied
      by GAP activity.
    supported_by:
    - &id001
      reference_id: PMID:22613832
      supporting_text: One of these, TBC1D14, binds ULK1 and Rab11 and disrupts recycling endosome (RE)
        traffic.
    - &id006
      reference_id: PMID:22613832
      supporting_text: However, the tubules formed by GFP-TBC1D14 were dependent on Rab11
    - reference_id: PMID:22613832
      supporting_text: TBC1D14 binds activated Rab11 but is not a
    proposed_replacement_terms:
    - id: GO:0031267
      label: small GTPase binding
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  qualifier: enables
  supporting_entities:
  - UniProtKB:Q9UBU9
  review:
    summary: IPI with NXF1 from the HuRI binary yeast two-hybrid reference map (Luck 2020).
    action: REMOVE
    reason: Bare protein binding is uninformative, and a single high-throughput Y2H pair with the mRNA
      export receptor NXF1 has no functional follow-up and no plausible link to TBC1D14 biology. Removal
      does not assert that the interaction is false.
    supported_by: []
- term:
    id: GO:0005768
    label: endosome
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: located_in
  supporting_entities:
  - ARBA:ARBA00028568
  review:
    summary: ARBA machine-learning prediction of endosome localization.
    action: MODIFY
    reason: Correct but general. Experimental data place TBC1D14 specifically on Rab11/transferrin-receptor-positive
      recycling endosomes; the gene already carries GO:0055037 recycling endosome by IDA.
    supported_by:
    - *id001
    - &id009
      reference_id: PMID:17562788
      supporting_text: TBC1D14NDRecyclingendosomesRecyclingendosomes
    proposed_replacement_terms:
    - id: GO:0055037
      label: recycling endosome
- term:
    id: GO:0005776
    label: autophagosome
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  supporting_entities:
  - PANTHER:PTN000538677
  - UniProtKB:Q9P2M4
  review:
    summary: IBA from TBC1D14-clade node PTN000538677, seeded only by Q9P2M4's own IDA.
    action: KEEP_AS_NON_CORE
    reason: The colocalization with LC3 is partial and minor; the predominant locations are recycling
      endosomes and, on starvation, the Golgi. TBC1D14 regulates autophagosome formation upstream (ATG9/RE
      membrane supply) rather than acting as a resident autophagosome component. The location is not wrong,
      so it is kept, but as peripheral. The IBA row merely re-expresses the same human IDA at the vertebrate
      node and gets the same action.
    supported_by:
    - &id002
      reference_id: PMID:22613832
      supporting_text: Endogenous TBC1D14 also shows partial colocalization with LC3
    - &id003
      reference_id: PMID:22613832
      supporting_text: Amino acid starvation causes TBC1D14 to relocalize from REs to the
- term:
    id: GO:0005776
    label: autophagosome
  evidence_type: IDA
  original_reference_id: PMID:22613832
  qualifier: located_in
  review:
    summary: 'IDA (Longatti 2012): partial colocalization of endogenous TBC1D14 with LC3 and low LC3 on
      a few overexpression-induced tubules.'
    action: KEEP_AS_NON_CORE
    reason: The colocalization with LC3 is partial and minor; the predominant locations are recycling
      endosomes and, on starvation, the Golgi. TBC1D14 regulates autophagosome formation upstream (ATG9/RE
      membrane supply) rather than acting as a resident autophagosome component. The location is not wrong,
      so it is kept, but as peripheral. The IBA row merely re-expresses the same human IDA at the vertebrate
      node and gets the same action.
    supported_by:
    - *id002
    - *id003
- term:
    id: GO:0005794
    label: Golgi apparatus
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: HPA immunofluorescence IDA, Golgi apparatus.
    action: ACCEPT
    reason: Endogenous TBC1D14 is on the Golgi, and its Golgi pool increases on amino-acid starvation.
      Sub-Golgi assignments differ between sources (Golgi stack, cis-Golgi network, trans-Golgi network),
      so Golgi apparatus is the most precise term the combined evidence supports consistently.
    supported_by:
    - &id004
      reference_id: PMID:26711178
      supporting_text: We have previously demonstrated that endogenous TBC1D14 is localised to the Golgi
        stack
    - &id005
      reference_id: file:human/TBC1D14/TBC1D14-uniprot.txt
      record_section: ["CC:SUBCELLULAR LOCATION"]
      supporting_text: Golgi apparatus, cis-Golgi network
    - reference_id: PMID:26711178
      supporting_text: Upon starvation and autophagy activation, TBC1D14 levels increase in the Golgi
- term:
    id: GO:0005794
    label: Golgi apparatus
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  supporting_entities:
  - UniProtKB-SubCell:SL-0132
  review:
    summary: UniProt SubCell mapping to Golgi apparatus (UniProt cites cis- and trans-Golgi network from
      PMID:22613832/26711178).
    action: ACCEPT
    reason: Endogenous TBC1D14 is on the Golgi, and its Golgi pool increases on amino-acid starvation.
      Sub-Golgi assignments differ between sources (Golgi stack, cis-Golgi network, trans-Golgi network),
      so Golgi apparatus is the most precise term the combined evidence supports consistently.
    supported_by:
    - *id004
    - *id005
    - reference_id: PMID:26711178
      supporting_text: Upon starvation and autophagy activation, TBC1D14 levels increase in the Golgi
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IEA
  original_reference_id: GO_REF:0000108
  qualifier: located_in
  supporting_entities:
  - GO:0071955
  review:
    summary: IEA inferred by inter-ontology link from the recycling endosome to Golgi transport annotation.
    action: KEEP_AS_NON_CORE
    reason: TBC1D14 is a peripheral membrane protein recruited by Rab11-GTP; when Rab11 is depleted it
      becomes diffuse, consistent with a soluble cytosolic pool. The term is plausible but carries little
      information about function.
    supported_by:
    - *id006
- term:
    id: GO:0010507
    label: negative regulation of autophagy
  evidence_type: IMP
  original_reference_id: PMID:22613832
  qualifier: involved_in
  review:
    summary: 'IMP (Longatti 2012): siRNA depletion of TBC1D14 increases starvation-induced LC3 lipidation
      and turnover.'
    action: ACCEPT
    reason: Loss-of-function with two siRNAs increases autophagic flux under starvation but not in fed
      cells, and overexpression inhibits autophagosome formation. This supports a negative regulatory
      role at the level of autophagy flux. The more mechanistic, sign-neutral autophagosome-assembly term
      is also carried (GO:2000785).
    supported_by:
    - &id013
      reference_id: PMID:22613832
      supporting_text: In cells in which TBC1D14 levels are substantially reduced, LC3 lipidation and
        turnover during starvation increase significantly.
    - reference_id: PMID:22613832
      supporting_text: TBC1D14-depleted cells showed little increase in LC3 lipidation in fed conditions
    - &id012
      reference_id: PMID:22613832
      supporting_text: TBC1D14WT significantly inhibited formation, but not maturation, of yellow (mRFP-GFP)
        LC3-positive autophagosomes
- term:
    id: GO:0019901
    label: protein kinase binding
  evidence_type: IPI
  original_reference_id: PMID:22613832
  qualifier: enables
  supporting_entities:
  - UniProtKB:O75385
  review:
    summary: IPI with ULK1 (Longatti 2012).
    action: KEEP_AS_NON_CORE
    reason: Binding to ULK1 is well supported (Y2H, co-IP, mapped to residues 224-330). Lamb 2016 showed
      that TBC1D14 and TRAPPIII regulate ATG9 traffic independently of ULK1, so the ULK1 interaction is
      real but not the core mechanism.
    supported_by:
    - *id007
    - *id008
    - &id011
      reference_id: PMID:26711178
      supporting_text: These data suggest that TBC1D14 and TRAPP may act upstream of ULK1 in regulating
        ATG9 traffic, perhaps by maintaining normal traffic into the Golgi.
- term:
    id: GO:0055037
    label: recycling endosome
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  supporting_entities:
  - PANTHER:PTN000538677
  - UniProtKB:Q9P2M4
  review:
    summary: IBA from TBC1D14-clade node PTN000538677, seeded by Q9P2M4's own experimental annotation.
    action: ACCEPT
    reason: 'Recycling endosomes are a core site of TBC1D14 action: Rab11-GTP recruits it to the endocytic
      recycling compartment, where it in turn recruits TRAPP. Shown in two independent laboratories''
      datasets (Fuchs 2007; Longatti 2012; Lamb 2016). The IBA restates this at the vertebrate node.'
    supported_by:
    - *id001
    - *id009
    - *id006
    - reference_id: PMID:26711178
      supporting_text: TBC1D14 in turn recruits TRAPP
- term:
    id: GO:0055037
    label: recycling endosome
  evidence_type: IDA
  original_reference_id: PMID:17562788
  qualifier: located_in
  review:
    summary: 'IDA (Fuchs 2007): TBC1D14 localizes to recycling endosomes.'
    action: ACCEPT
    reason: 'Recycling endosomes are a core site of TBC1D14 action: Rab11-GTP recruits it to the endocytic
      recycling compartment, where it in turn recruits TRAPP. Shown in two independent laboratories''
      datasets (Fuchs 2007; Longatti 2012; Lamb 2016). The IBA restates this at the vertebrate node.'
    supported_by:
    - *id001
    - *id009
    - *id006
    - reference_id: PMID:26711178
      supporting_text: TBC1D14 in turn recruits TRAPP
- term:
    id: GO:0055037
    label: recycling endosome
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-8854759
  qualifier: located_in
  review:
    summary: 'Reactome TAS: TBC1D14 binds RAB11 and ULK1 on recycling endosomes.'
    action: ACCEPT
    reason: 'Recycling endosomes are a core site of TBC1D14 action: Rab11-GTP recruits it to the endocytic
      recycling compartment, where it in turn recruits TRAPP. Shown in two independent laboratories''
      datasets (Fuchs 2007; Longatti 2012; Lamb 2016). The IBA restates this at the vertebrate node.'
    supported_by:
    - *id001
    - *id009
    - *id006
    - reference_id: PMID:26711178
      supporting_text: TBC1D14 in turn recruits TRAPP
- term:
    id: GO:0071955
    label: recycling endosome to Golgi transport
  evidence_type: IMP
  original_reference_id: PMID:17562788
  qualifier: involved_in
  review:
    summary: 'IMP (Fuchs 2007): overexpressed TBC1D14 blocks Shiga toxin transport to the Golgi without
      affecting EGF uptake.'
    action: ACCEPT
    reason: 'The original evidence is an overexpression phenotype independent of the catalytic residue,
      which on its own would be weak. Lamb 2016 independently established the mechanism: TBC1D14 bridges
      Rab11-positive recycling endosomes to TRAPPIII, its depletion reduces RAB1 activation, and TBC1D14/TRAPPIII
      regulate a constitutive recycling-endosome-to-early-Golgi step that maintains the cycling pool of
      ATG9. This is the best-supported process for TBC1D14.'
    supported_by:
    - reference_id: PMID:17562788
      supporting_text: In the case of TBC1D14, although the Golgi was fragmented, Shiga toxin did not
        localize to these Golgi fragments, indicating there was a block in transport.
    - *id010
    - &id014
      reference_id: PMID:26711178
      supporting_text: These data support a model where TBC1D14 acts as a bridge between a TRAPP complex
        and activated RAB11.
    - &id015
      reference_id: PMID:26711178
      supporting_text: However, TBC1D14 depletion resulted in a significant reduction in RAB1B bound to
        GFP
    - *id011
- term:
    id: GO:1902017
    label: regulation of cilium assembly
  evidence_type: IMP
  original_reference_id: PMID:17646400
  qualifier: involved_in
  negated: true
  review:
    summary: 'NOT IMP: in the Yoshimura 2007 overexpression screen of TBC RabGAPs, TBC1D14 did not affect
      primary cilium formation.'
    action: ACCEPT
    reason: TBC1D14 is not named in the cached main text; the per-GAP results are in the screen figure/supplement,
      which the curator read. The main text states that GAPs other than the hits had no effect on primary
      cilia, and nothing else links TBC1D14 to cilia. The negative annotation is accepted, deferring to
      the curator.
    supported_by:
    - reference_id: PMID:17646400
      supporting_text: Other GAPs either had no effect on primary cilia
- term:
    id: GO:2000785
    label: regulation of autophagosome assembly
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  supporting_entities:
  - PANTHER:PTN008586039
  - UniProtKB:Q9P2M4
  review:
    summary: IBA from TBC1D14-clade node PTN008586039 (Euteleostomi), seeded by Q9P2M4's own IMP.
    action: ACCEPT
    reason: 'TBC1D14 regulates autophagosome formation by controlling membrane and ATG9 supply from recycling
      endosomes. The sign-neutral regulation term is appropriate: depletion increases starvation-induced
      autophagy (Longatti 2012), while the Lamb 2016 model places TBC1D14/TRAPPIII in maintaining the
      ATG9 cycling pool needed for initiation. PAINT placed this term on a TBC1D14-specific node, which
      supports transfer to TBC1D14 orthologs; the cod tbc1d14 models fall in this clade.'
    supported_by:
    - *id012
    - *id013
    - *id011
- term:
    id: GO:2000785
    label: regulation of autophagosome assembly
  evidence_type: IMP
  original_reference_id: PMID:22613832
  qualifier: involved_in
  review:
    summary: 'IMP (Longatti 2012): TBC1D14 overexpression inhibits formation, not maturation, of autophagosomes;
      depletion increases starvation-induced LC3 lipidation.'
    action: ACCEPT
    reason: 'TBC1D14 regulates autophagosome formation by controlling membrane and ATG9 supply from recycling
      endosomes. The sign-neutral regulation term is appropriate: depletion increases starvation-induced
      autophagy (Longatti 2012), while the Lamb 2016 model places TBC1D14/TRAPPIII in maintaining the
      ATG9 cycling pool needed for initiation. PAINT placed this term on a TBC1D14-specific node, which
      supports transfer to TBC1D14 orthologs; the cod tbc1d14 models fall in this clade.'
    supported_by:
    - *id012
    - *id013
    - *id011
- term:
    id: GO:0060090
    label: molecular adaptor activity
  evidence_type: IDA
  original_reference_id: PMID:26711178
  review:
    summary: 'Proposed: TBC1D14 bridges GTP-bound Rab11 on recycling endosomes to the TRAPPIII complex
      (via TRAPPC8).'
    action: NEW
    reason: Lamb 2016 showed binding of TBC1D14 to TRAPP through its N-terminal TRAPP-binding region and
      TRAPPC8, recruitment of TRAPP and RAB1 onto Rab11-positive tubules generated by TBC1D14, and reduced
      RAB1 activation on TBC1D14 depletion. TBC1D14 itself does the bridging work, so this is participation,
      not mere necessity. No more specific GO term for TRAPP complex binding exists.
    supported_by:
    - reference_id: PMID:26711178
      supporting_text: These data support a model where TBC1D14 acts as a bridge between a TRAPP complex
        and activated RAB11.
    - reference_id: PMID:26711178
      supporting_text: TRAPPC8 is required for TBC1D14 to bind the TRAPP complex
    - reference_id: PMID:26711178
      supporting_text: However, TBC1D14 depletion resulted in a significant reduction in RAB1B bound to
        GFP
references:
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping,
    accompanied by conservative changes to GO terms applied by UniProt
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: GO_REF:0000108
  title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning models
  findings: []
- id: PMID:17562788
  title: Specific Rab GTPase-activating proteins define the Shiga toxin and epidermal growth factor uptake
    pathways.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Overexpression screen; TBC1D14 blocks Shiga toxin transport independently of its catalytic
      residue and localizes to recycling endosomes. GAP target not determined.
- id: PMID:17646400
  title: Functional dissection of Rab GTPases involved in primary cilium formation.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Screen of TBC GAPs for cilium formation; TBC1D14 not a hit (basis of the NOT annotation).
      TBC1D14 is not named in the cached main text.
- id: PMID:22613832
  title: TBC1D14 regulates autophagosome formation via Rab11- and ULK1-positive recycling endosomes.
  findings:
  - statement: TBC1D14 has no detectable GAP activity on 47 Rabs; it binds active Rab11, localizes to
      recycling endosomes, and negatively regulates starvation-induced autophagosome formation.
    supporting_text: supporting the data that TBC1D14 has no GAP activity
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Primary characterization paper; full text cached. Establishes RE localization, ULK1/Rab11
      binding, absence of GAP activity, and autophagy phenotypes.
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: HuRI high-throughput binary interactome; source of the NXF1 pair only.
- id: Reactome:R-HSA-8854759
  title: TBC1D14 binds RAB11 and ULK1
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Reactome summary of Longatti 2012, notes absence of GAP activity.
- id: PMID:26711178
  title: TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic.
  findings:
  - statement: TBC1D14 bridges Rab11 and TRAPPIII (via TRAPPC8) and is required for RAB1 activation and
      ATG9 traffic from recycling endosomes to the Golgi.
    supporting_text: These data support a model where TBC1D14 acts as a bridge between a TRAPP complex
      and activated RAB11.
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text cached. Establishes TRAPPIII/TRAPPC8 binding, RAB1 activation requirement
      and the RE-to-Golgi ATG9 model.
- id: file:human/TBC1D14/TBC1D14-uniprot.txt
  title: UniProtKB Q9P2M4 entry for TBC1D14
  findings: []
core_functions:
- description: Rab11 effector and adaptor that links active Rab11 on recycling endosomes to the TRAPPIII
    complex (via TRAPPC8), supporting TRAPP-dependent RAB1 activation and a constitutive recycling-endosome-to-early-Golgi
    transport step that maintains the cycling pool of ATG9. Experimentally established in human cells;
    no GAP activity has been detected.
  molecular_function:
    id: GO:0060090
    label: molecular adaptor activity
  directly_involved_in:
  - id: GO:0071955
    label: recycling endosome to Golgi transport
  locations:
  - id: GO:0055037
    label: recycling endosome
  - id: GO:0005794
    label: Golgi apparatus
  supported_by:
  - *id014
  - reference_id: PMID:26711178
    supporting_text: TBC1D14 in turn recruits TRAPP
  - reference_id: PMID:26711178
    supporting_text: TRAPPC8 is required for TBC1D14 to bind the TRAPP complex
  - *id015
  - *id011
  - *id006
- description: Binds GTP-bound Rab11, which recruits TBC1D14 to recycling endosomes; the binding is not
    accompanied by GAP activity.
  molecular_function:
    id: GO:0031267
    label: small GTPase binding
  locations:
  - id: GO:0055037
    label: recycling endosome
  supported_by:
  - *id001
  - *id006
  - *id016
- description: Regulates starvation-induced autophagosome formation by controlling membrane and ATG9 supply
    from recycling endosomes; depletion increases starvation-induced LC3 lipidation and overexpression
    inhibits autophagosome formation.
  molecular_function:
    id: GO:0060090
    label: molecular adaptor activity
  directly_involved_in:
  - id: GO:2000785
    label: regulation of autophagosome assembly
  supported_by:
  - *id013
  - *id012
  - *id011
suggested_questions:
- question: TBC1D14 retains the TBC arginine and glutamine fingers yet shows no GAP activity on 47 Rabs.
    Is it a GAP for an untested Rab, or has its TBC domain been co-opted as a Rab11-binding effector module?
- question: Should the family-root GTPase activator activity IBA (PTN000537561) be blocked at the TBC1D14
    clade node, given the human negative biochemical data?
- question: Is 'molecular adaptor activity' the best MF for the Rab11-TRAPPIII bridge, or should a GO
    term for TRAPP complex binding be created?
suggested_experiments:
- description: Purify TBC1D14 TBC domain and test GAP activity on Rab1, Rab11 and the remaining Rabs with
    intrinsic hydrolysis controls; compare with an active TBC GAP carrying the same R/Q residues.
  experiment_type: in vitro biochemistry
- description: Reconstitute Rab11-GTP-dependent recruitment of TRAPPIII to liposomes with and without
    TBC1D14 or its TRAPP-binding region, and measure RAB1 GEF activity.
  experiment_type: in vitro reconstitution
- description: Knock out TBC1D14 in a zebrafish or cell model of a teleost and test ATG9 distribution
    and starvation-induced autophagy, to check conservation of the human mechanism for transfer to fish
    orthologs.
  experiment_type: genetic loss of function
