Thrombospondin-2 (THBS2/TSP2) is a secreted homotrimeric matricellular glycoprotein (~145 kDa per monomer) that modulates cell-matrix interactions rather than serving as a core structural ECM component. THBS2 contains a modular domain architecture including an N-terminal heparin-binding domain, procollagen-like region, three type I thrombospondin repeats (TSRs), EGF-like repeats, seven type III calcium-binding repeats, and C-terminal globular domain with RGD cell attachment site. Primary functions include: (1) Potent endogenous angiogenesis inhibitor - the type I repeats bind CD36 receptor on endothelial cells triggering apoptosis and capillary regression via caspase-3 activation and mitochondrial membrane potential loss; (2) Regulator of ECM organization - modulates collagen fibrillogenesis by binding MMP-2 and facilitating its endocytic clearance via LRP1 receptor; (3) Mediator of cell-matrix adhesion - binds integrins including avb3 via RGD motif. THBS2-null mice exhibit disorganized collagen fibrils, elevated MMP-2 levels, connective tissue defects (skin fragility, lax tendons), and increased tissue vascularization. Heterozygous THBS2 pathogenic variants cause Ehlers-Danlos syndrome with vascular features (EDSCLL3) in humans via impaired MMP2 clearance. Localizes to interstitial ECM and basement membranes of connective tissues. Expression is low at baseline but induced during tissue remodeling, wound healing, and fibrosis. Recent studies implicate THBS2 in fibrogenesis via TLR4-FAK/TGF-beta signaling in hepatic stellate cells. Functions as an extracellular scaffold orchestrating cell-matrix communication, tissue architecture, and angiogenic balance.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0031012 extracellular matrix | IBA GO_REF:0000033 | ACCEPT | Summary: THBS2 is a secreted matricellular protein that localizes to and functions within the extracellular matrix. IBA annotation is phylogenetically well-supported across thrombospondin family members. Reason: Core ECM localization is fundamental to THBS2 function as a matricellular protein that modulates cell-matrix interactions. Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions file:human/THBS2/THBS2-deep-research-openai.md See deep research file for comprehensive analysis |
| GO:0016525 negative regulation of angiogenesis | IBA GO_REF:0000033 | ACCEPT | Summary: THBS2 is a potent endogenous angiogenesis inhibitor, functioning via CD36-mediated endothelial cell apoptosis. This is a well-established core function conserved across thrombospondin family members. Reason: Anti-angiogenic activity is a primary function of THBS2 mediated through its type I repeats binding to CD36 receptor. Supporting Evidence: PMID:20714802 N-TSP2-Fc potently induced apoptosis of HDMEC in vitro in a CD36-dependent manner file:human/THBS2/THBS2-uniprot.txt Ligand for CD36 mediating antiangiogenic properties |
| GO:0005509 calcium ion binding | IEA GO_REF:0000002 | ACCEPT | Summary: THBS2 contains seven type III calcium-binding repeats that coordinate multiple calcium ions. X-ray crystallography at 2.6 angstroms resolution confirms calcium binding in the signature domain. Reason: Calcium binding is a structural feature of the type III repeats, confirmed by crystal structure (PDB 1YO8). Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF 551-1172 IN COMPLEX WITH CALCIUM IONS |
| GO:0005576 extracellular region | IEA GO_REF:0000002 | ACCEPT | Summary: THBS2 is a secreted protein that functions in the extracellular space. Contains signal peptide (aa 1-18) and is released from cells. Reason: Core localization for this secreted matricellular protein. Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt SIGNAL 1..18 |
| GO:0007155 cell adhesion | IEA GO_REF:0000120 | ACCEPT | Summary: THBS2 mediates cell-to-cell and cell-to-matrix adhesion through binding to integrins (via RGD motif at positions 928-930), CD36, and ECM components like fibronectin, laminin, and collagen. Reason: Cell adhesion is a core matricellular function of THBS2. Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions |
| GO:0008201 heparin binding | IEA GO_REF:0000120 | ACCEPT | Summary: THBS2 contains an N-terminal heparin-binding domain (aa 19-232) that binds heparin and heparan sulfate proteoglycans. TSP2 homotrimers have lower heparin affinity than TSP1 homotrimers. Reason: Heparin binding domain is a characterized structural feature of THBS2. Supporting Evidence: PMID:1459996 homotrimeric TSP2 has a lower affinity for heparin than homotrimeric TSP1 |
| GO:0031091 platelet alpha granule | IEA GO_REF:0000117 | UNDECIDED | Summary: Unlike TSP1 which is abundantly stored in platelet alpha granules, THBS2 is primarily produced by stromal cells (fibroblasts, hepatic stellate cells). Reason: THBS2 may be present in platelet alpha granules at low levels, but evidence is unclear. TSP1 is the major platelet thrombospondin. |
| GO:0005515 protein binding | IPI PMID:19818485 Gabapentin receptor alpha2delta-1 is a neuronal thrombospond... | MODIFY | Summary: The referenced publication demonstrates that thrombospondins (including THBS2) bind to alpha2delta-1 (Cacna2d1), the gabapentin receptor, via their EGF-like domains. This interaction mediates synaptogenesis. However, the general 'protein binding' term is uninformative. Reason: While the interaction with alpha2delta-1 is documented, 'protein binding' is too generic. A more specific term would be preferable if available. Proposed replacements: cell adhesion molecule binding Supporting Evidence: PMID:19818485 we identify the neuronal thrombospondin receptor involved in CNS synapse formation as alpha2delta-1 |
| GO:0005604 basement membrane | IEA GO_REF:0000107 | ACCEPT | Summary: THBS2 localizes to basement membranes as part of its ECM distribution. This is consistent with its role in modulating matrix organization. Reason: Valid localization for this matricellular protein. |
| GO:0016525 negative regulation of angiogenesis | IEA GO_REF:0000120 | ACCEPT | Summary: Duplicate annotation of core anti-angiogenic function. Consistent with IBA and IDA evidence for same term. Reason: Core anti-angiogenic function supported by multiple evidence types. |
| GO:0031012 extracellular matrix | IEA GO_REF:0000107 | ACCEPT | Summary: Duplicate ECM localization annotation from ortholog transfer. Consistent with IBA evidence. Reason: Core ECM localization well-supported. |
| GO:0051965 positive regulation of synapse assembly | IEA GO_REF:0000107 | REMOVE | Summary: This annotation appears to be transferred from TSP1, which has established roles in synaptogenesis via alpha2delta-1 binding. While THBS2 can also bind alpha2delta-1, the synaptogenesis function is primarily attributed to TSP1 (expressed during postnatal synapse formation) rather than TSP2. Reason: The synaptogenic function is primarily documented for TSP1, not TSP2. TSP1/2 are differentially expressed, with TSP1 being the primary synaptogenic thrombospondin in the CNS. Supporting Evidence: PMID:19818485 Oct 8. Gabapentin receptor alpha2delta-1 is a neuronal thrombospondin receptor responsible for excitatory CNS synaptogenesis. |
| GO:0005201 extracellular matrix structural constituent | RCA PMID:28327460 Comprehensive proteomic characterization of stem cell-derive... | MODIFY | Summary: This proteomic study identified THBS2 in stem cell-derived ECM preparations. However, THBS2 is a matricellular modulator rather than a core structural ECM component like collagen or fibronectin. Reason: THBS2 modulates ECM organization but is not a structural constituent like collagens. A term reflecting its regulatory role would be more accurate. Proposed replacements: extracellular matrix organization Supporting Evidence: PMID:28327460 characterized and compared the protein composition of ECM produced in vitro by bone marrow-derived MSC, adipose-derived MSC and neonatal fibroblasts |
| GO:0031012 extracellular matrix | HDA PMID:28327460 Comprehensive proteomic characterization of stem cell-derive... | ACCEPT | Summary: High-throughput proteomic detection of THBS2 in cell-derived ECM preparations. Consistent with its known ECM localization. Reason: ECM localization confirmed by proteomic analysis. Supporting Evidence: PMID:28327460 characterized and compared the protein composition of ECM produced in vitro |
| GO:0005201 extracellular matrix structural constituent | RCA PMID:28675934 Characterization of the Extracellular Matrix of Normal and D... | MODIFY | Summary: Similar to PMID:28327460, this proteomic characterization identified THBS2 in ECM, but THBS2 functions as a matricellular modulator, not a structural component. Reason: THBS2 is not a structural ECM constituent; it modulates ECM organization and cell-matrix signaling. Proposed replacements: extracellular matrix organization Supporting Evidence: PMID:28675934 Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics. |
| GO:0031012 extracellular matrix | HDA PMID:28675934 Characterization of the Extracellular Matrix of Normal and D... | ACCEPT | Summary: Proteomic detection of THBS2 in ECM preparations from normal and diseased tissues. Consistent with known ECM localization. Reason: ECM localization confirmed by tissue proteomics. Supporting Evidence: PMID:28675934 Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics. |
| GO:0005576 extracellular region | HDA PMID:27068509 Extracellular matrix remodelling in response to venous hyper... | ACCEPT | Summary: Proteomic analysis of varicose veins ECM remodeling detected THBS2 in extracellular fraction, consistent with its secreted nature. Reason: Core extracellular localization. Supporting Evidence: PMID:27068509 Apr 11. Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins. |
| GO:0031091 platelet alpha granule | IDA PMID:1737102 Localization of platelet osteonectin at the internal face of... | UNDECIDED | Summary: This publication (Breton-Gorius et al. 1992) primarily focuses on osteonectin localization in platelets, with thrombospondin mentioned as a binding partner that does not colocalize with osteonectin. The study does not directly demonstrate THBS2 localization to alpha granules. Reason: The cited publication focuses on osteonectin rather than THBS2 specifically. TSP1 is the primary platelet thrombospondin. Cannot confirm THBS2-specific alpha granule localization from this reference. Supporting Evidence: PMID:1737102 In separate double-label studies, thrombospondin and von Willebrand factor did not colocalize with osteonectin in resting platelets |
| GO:0005576 extracellular region | TAS Reactome:R-HSA-382054 | ACCEPT | Summary: Reactome pathway annotation for PDGF binding to ECM proteins. THBS2 is appropriately annotated as extracellular based on its known secretion and ECM localization. Reason: Core extracellular localization. |
| GO:0016525 negative regulation of angiogenesis | IDA PMID:20714802 CD36-mediated activation of endothelial cell apoptosis by an... | ACCEPT | Summary: Direct experimental evidence that recombinant N-terminal TSP2 fragment inhibits angiogenesis via CD36-mediated endothelial cell apoptosis. The study demonstrates CD36-dependent loss of mitochondrial membrane potential and caspase-3 activation in endothelial cells. Reason: Strong experimental evidence for CD36-mediated anti-angiogenic mechanism of THBS2. This is a core function. Supporting Evidence: PMID:20714802 N-TSP2-Fc potently induced apoptosis of HDMEC in vitro in a CD36-dependent manner PMID:20714802 the antiangiogenic activity of N-TSP2-Fc is dependent on the CD36 receptor |
| GO:0008201 heparin binding | TAS PMID:1459996 Thrombospondin 1 and thrombospondin 2 are expressed as both ... | ACCEPT | Summary: This study demonstrates that TSP1 and TSP2 can form homo- and heterotrimers, and shows that homotrimeric TSP2 has lower heparin affinity than homotrimeric TSP1. Confirms heparin binding activity for THBS2. Reason: Direct experimental comparison of TSP1 and TSP2 heparin binding properties. Supporting Evidence: PMID:1459996 homotrimeric TSP2 has a lower affinity for heparin than homotrimeric TSP1 |
| GO:0005102 signaling receptor binding | NAS | NEW | Summary: Added to align core_functions with existing annotations. Reason: Core function term not present in existing_annotations. Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt Can bind to fibrinogen, fibronectin, laminin and type V collagen |
| GO:0005154 epidermal growth factor receptor binding | NAS | NEW | Summary: Added to align core_functions with existing annotations. Reason: Core function term not present in existing_annotations. Supporting Evidence: PMID:20714802 the antiangiogenic activity of N-TSP2-Fc is dependent on the CD36 receptor file:human/THBS2/THBS2-uniprot.txt Interacts (via the TSP type I repeats) with CD36; the interaction conveys an antiangiogenic effect |
| GO:0005178 integrin binding | NAS | NEW | Summary: Added to align core_functions with existing annotations. Reason: Core function term not present in existing_annotations. Supporting Evidence: file:human/THBS2/THBS2-uniprot.txt Cell adhesion |
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