Thrombospondin-4 (TSP-4) is a secreted extracellular matrix (ECM) glycoprotein that forms homopentamers. It belongs to the thrombospondin family (subgroup B, which lacks TSR type 1 repeats) and contains calcium-binding EGF-like modules and C-terminal thrombospondin type 3 repeats. TSP-4 is primarily expressed in heart, skeletal muscle, and tendon tissues. The protein functions as a matricellular signaling molecule that modulates cell adhesion, migration, and proliferation through interactions with integrins (particularly integrin alpha-M-beta-2) and other ECM components. TSP-4 binds heparin and calcium, with calcium binding being important for its conformational stability. A key role is in the adaptive endoplasmic reticulum stress response, where TSP-4 binds to and activates ATF6alpha to promote protective ER stress responses in the heart. TSP-4 is induced during tissue injury and remodeling, contributing to cardioprotective responses to pressure overload. The A387P variant is associated with increased cardiovascular disease risk through enhanced proinflammatory signaling in neutrophils.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
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GO:0031012
extracellular matrix
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: TSP-4 is a secreted matricellular glycoprotein that is incorporated into the extracellular matrix. This is well-established through multiple lines of evidence including its secretion from cells, binding to ECM components, and localization studies.
Reason: THBS4/TSP-4 is definitively an extracellular matrix protein. UniProt states it is "Secreted, extracellular space, extracellular matrix" and the deep research confirms TSP-4 is secreted to the extracellular space and incorporated into the ECM, where it binds collagenous and non-collagenous components [THBS4-deep-research-falcon.md]. The IBA annotation is phylogenetically well-supported.
Supporting Evidence:
PMID:7852353
Recombinant thrombospondin-4 has been purified from the culture supernatant by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity chromatography
file:human/THBS4/THBS4-deep-research-falcon.md
model: Edison Scientific Literature
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GO:0034976
response to endoplasmic reticulum stress
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: TSP-4 plays a key role in the adaptive ER stress response. It binds ATF6alpha in the ER lumen and promotes its activation and nuclear translocation, leading to upregulation of protective ER stress response factors.
Reason: This is a well-established core function of TSP-4. The 2012 Cell paper by Lynch et al. definitively established this mechanism, showing that TSP-4 binds ATF6alpha and promotes a protective ER stress response. The IBA annotation is appropriate.
Supporting Evidence:
PMID:22682248
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ± (Atf6Ξ±) to promote its nuclear shuttling
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|
GO:0005509
calcium ion binding
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: TSP-4 is a calcium-binding protein with EGF-like calcium-binding domains and type 3 repeats that coordinate calcium ions. Calcium binding affects the conformational stability of the protein.
Reason: Calcium binding is a well-established property of TSP-4, supported by IDA evidence (PMID:7852353, PMID:16246837) as well as domain architecture containing calcium-binding EGF-like modules. The IEA annotation is correct and consistent with experimental evidence.
Supporting Evidence:
PMID:7852353
The observation of a calcium-dependent change in the electron microscopic appearance of thrombospondin-4 is consistent with limited tryptic digestion data that indicate that thrombospondin-4 is resistant to digestion in the presence of calcium.
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GO:0005576
extracellular region
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: TSP-4 is a secreted protein that localizes to the extracellular region. This is a broad but accurate localization term.
Reason: TSP-4 is secreted and localizes to the extracellular region. This is supported by UniProt subcellular localization annotations and multiple experimental studies. The IEA annotation is correct, though more specific terms (extracellular matrix, extracellular space) are also annotated.
Supporting Evidence:
PMID:7852353
Recombinant thrombospondin-4 has been purified from the culture supernatant by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity chromatography
|
|
GO:0005783
endoplasmic reticulum
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: TSP-4 is resident in the ER/SR compartment where it functions in the adaptive ER stress response through interaction with ATF6alpha. This is particularly important in cardiomyocytes.
Reason: TSP-4 resides in the ER compartment, particularly in cardiomyocytes, where it participates in the ER stress response. This is well-established from mouse studies that are expected to translate to human based on sequence conservation.
Supporting Evidence:
PMID:22682248
We observed prominent Thbs4 protein localization within the ER/SR compartment of adult cardiomyocytes of the heart, with some mild accumulation in the extracellular space or ECM
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|
GO:0006986
response to unfolded protein
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: TSP-4 participates in the unfolded protein response through its role in activating ATF6alpha, which is one of the three main UPR signaling branches.
Reason: TSP-4 activates ATF6alpha, one of the three primary UPR pathways. The ATF6 branch aids in resolution of misfolded proteins. This IEA annotation from UniProt keywords is consistent with experimental evidence.
Supporting Evidence:
PMID:22682248
Engagement of the ER stress response acutely reduces protein synthesis in the ER, enhances protein degradation of damaged or misfolded proteins, and selectively induces expression of protective proteins
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GO:0007155
cell adhesion
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: TSP-4 mediates cell adhesion through interactions with integrins and cell surface proteoglycans. It supports attachment and spreading of various cell types including myoblasts and neutrophils.
Reason: Cell adhesion is a well-documented function of TSP-4. UniProt describes it as "Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions." Multiple studies demonstrate TSP-4 supports cell attachment.
Supporting Evidence:
PMID:7519904
Thrombospondin-4 (TSP-4) is also present in skeletal muscle and a fusion protein containing the carboxy-terminal domain of TSP-4 also supported myoblast adhesion, although this protein was less active on a molar basis than the TSP-1 fusion protein
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|
GO:0007165
signal transduction
|
IEA
GO_REF:0000108 |
KEEP AS NON CORE |
Summary: TSP-4 activates multiple signaling pathways including MAPK signaling through integrin engagement and ATF6alpha-mediated ER stress signaling.
Reason: While TSP-4 does participate in signal transduction (e.g., activating p38MAPK and JNK through integrin alpha-M-beta-2, and ATF6alpha signaling), this is a very general term. The more specific signaling functions are better captured by other annotations. Keep as non-core since signaling is an outcome of its ECM/receptor interactions rather than a primary molecular function.
Supporting Evidence:
PMID:16099885
Despite the similarity in these responses, the P387 variant induced more robust tyrosine phosphorylation of the stress-related mitogen-activated protein kinases (MAPKs): p38MAPK and c-Jun NH2-terminal kinase (JNK), as well as signal transducer and activator of transcription-1 (STAT1) and heat shock protein 27 (HSP27) than the A387 variant
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GO:0008083
growth factor activity
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: TSP-4 has mitogenic activity and can stimulate cell proliferation, particularly through interaction with PTBP3/ROD1.
Reason: TSP-4 has been shown to have mitogenic activity. UniProt annotates it with the "Growth factor" and "Mitogen" keywords. PMID:19441079 demonstrated that PTBP3 binds to the C-terminal peptide of TSP-4 and is involved in its mitogenic activity.
Supporting Evidence:
PMID:19441079
Regulator of differentiation 1 (ROD1) binds to the amphipathic C-terminal peptide of thrombospondin-4 and is involved in its mitogenic activity.
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GO:0008201
heparin binding
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: TSP-4 binds heparin, which was used for purification of the recombinant protein by heparin-Sepharose chromatography.
Reason: Heparin binding is experimentally established for TSP-4. Lawler et al. (1995) used heparin-Sepharose chromatography to purify recombinant TSP-4, demonstrating this binding activity. There is also IDA evidence (PMID:7852353) for this term.
Supporting Evidence:
PMID:7852353
Recombinant thrombospondin-4 has been purified from the culture supernatant by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity chromatography
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|
GO:0016529
sarcoplasmic reticulum
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: TSP-4 localizes to the sarcoplasmic reticulum in cardiomyocytes, consistent with its role in cardiac ER stress response.
Reason: TSP-4 is found in the ER/SR compartment of cardiomyocytes. Given that cardiac muscle cells have specialized sarcoplasmic reticulum, this localization is appropriate for the cardioprotective functions of TSP-4.
Supporting Evidence:
PMID:22682248
We observed prominent Thbs4 protein localization within the ER/SR compartment of adult cardiomyocytes of the heart, with some mild accumulation in the extracellular space or ECM
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|
GO:0048771
tissue remodeling
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: TSP-4 is induced during tissue injury and actively participates in tissue remodeling, particularly in the heart during pressure overload and injury.
Reason: Tissue remodeling is a well-established function of TSP-4. UniProt describes its role in "adaptive responses of the heart to pressure overload and in myocardial function and remodeling." TSP-4 is induced during tissue damage and modulates ECM reconstruction.
Supporting Evidence:
PMID:22682248
Thrombospondin (Thbs) proteins are induced in sites of tissue damage or active remodeling.
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|
GO:0051781
positive regulation of cell division
|
IEA
GO_REF:0000043 |
KEEP AS NON CORE |
Summary: TSP-4 has mitogenic activity and can promote cell proliferation in certain contexts.
Reason: While TSP-4 has mitogenic activity (UniProt keyword), its effects on cell proliferation are context-dependent. For example, the P387 variant suppresses endothelial cell proliferation. This is not a primary function but rather a secondary effect in specific cellular contexts.
Supporting Evidence:
PMID:12952849
Both variant fragments increased the proliferation of human aortic smooth muscle cells.
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|
GO:0005615
extracellular space
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: TSP-4 is secreted and found in the extracellular space. This is well-supported by multiple lines of evidence.
Reason: TSP-4 is secreted into the extracellular space. This is supported by UniProt annotations and experimental studies showing secretion and extracellular localization.
Supporting Evidence:
PMID:7852353
Recombinant thrombospondin-4 has been purified from the culture supernatant by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity chromatography
|
|
GO:0031012
extracellular matrix
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Duplicate annotation for extracellular matrix localization, which is correct for TSP-4.
Reason: This is a duplicate of the IBA annotation. TSP-4 is definitively an ECM protein. Multiple evidence codes supporting the same term is acceptable.
Supporting Evidence:
PMID:17927980
thrombospondin-4, whereas type IV collagen alpha3, type V collagen, fibrillin-1 and -2, thrombospondin-1, and endostatin were present in the corneal BM
|
|
GO:0034103
regulation of tissue remodeling
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: TSP-4 regulates tissue remodeling processes, particularly in the heart during pressure overload and injury responses.
Reason: TSP-4 plays a regulatory role in tissue remodeling. UniProt states it is "involved in adaptive responses of the heart to pressure overload and in myocardial function and remodeling." This is more specific than general tissue remodeling and is appropriate.
Supporting Evidence:
PMID:22682248
Here we describe a function for Thbs as ER-resident effectors of an adaptive ER stress response
|
|
GO:0034976
response to endoplasmic reticulum stress
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Duplicate annotation for ER stress response, well-supported by experimental evidence.
Reason: This is a duplicate of the IBA annotation. The ER stress response role is well-established through ATF6alpha interaction.
Supporting Evidence:
PMID:22682248
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ± (Atf6Ξ±) to promote its nuclear shuttling
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|
GO:0048266
behavioral response to pain
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: TSP-4 may contribute to neuropathic pain states through effects on spinal presynaptic hypersensitivity after peripheral nerve injury.
Reason: UniProt indicates TSP-4 "May contribute to spinal presynaptic hypersensitivity and neuropathic pain states after peripheral nerve injury" based on similarity. This is not a core function but a specialized role in the nervous system that warrants keeping the annotation as non-core.
Supporting Evidence:
UniProt:P35443
May contribute to spinal presynaptic hypersensitivity and neuropathic pain states after peripheral nerve injury.
|
|
GO:0031012
extracellular matrix
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Third annotation for extracellular matrix localization by sequence similarity.
Reason: TSP-4 is an extracellular matrix protein. Multiple evidence codes supporting the same accurate annotation is acceptable.
Supporting Evidence:
PMID:7852353
The thrombospondins are a family of extracellular calcium binding proteins that are involved in cell proliferation, adhesion, and migration
|
|
GO:0070062
extracellular exosome
|
HDA
PMID:23533145 In-depth proteomic analyses of exosomes isolated from expres... |
ACCEPT |
Summary: TSP-4 was detected in exosomes isolated from expressed prostatic secretions in a high-throughput proteomics study.
Reason: This HDA annotation from a proteomics study detecting TSP-4 in exosomes is valid. Secreted proteins like TSP-4 can be found in exosomal fractions.
Supporting Evidence:
PMID:23533145
In pooled EPS-urine exosome samples, ~900 proteins were detected.
|
|
GO:0005515
protein binding
|
IPI
PMID:22682248 A thrombospondin-dependent pathway for a protective ER stres... |
MODIFY |
Summary: TSP-4 interacts with ATF6alpha through its type 3 repeat domain to promote ATF6alpha activation.
Reason: "Protein binding" is too vague and does not convey the specific functional interaction. TSP-4 has well-characterized interactions with ATF6alpha and integrins. A more specific term should be used.
Proposed replacements:
integrin binding
protein-macromolecule adaptor activity
Supporting Evidence:
PMID:22682248
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ± (Atf6Ξ±) to promote its nuclear shuttling
|
|
GO:0005783
endoplasmic reticulum
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Duplicate annotation for ER localization by sequence similarity.
Reason: ER localization is well-established for TSP-4, particularly in cardiomyocytes where it functions in ER stress response.
Supporting Evidence:
PMID:22682248
We observed prominent Thbs4 protein localization within the ER/SR compartment of adult cardiomyocytes of the heart, with some mild accumulation in the extracellular space or ECM
|
|
GO:0016529
sarcoplasmic reticulum
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Duplicate annotation for sarcoplasmic reticulum localization by sequence similarity.
Reason: SR localization is established in cardiomyocytes.
Supporting Evidence:
PMID:22682248
We observed prominent Thbs4 protein localization within the ER/SR compartment of adult cardiomyocytes of the heart, with some mild accumulation in the extracellular space or ECM
|
|
GO:0034103
regulation of tissue remodeling
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Duplicate annotation for regulation of tissue remodeling by sequence similarity.
Reason: TSP-4 regulates tissue remodeling, particularly cardiac remodeling during pressure overload.
Supporting Evidence:
PMID:22682248
Thbs4 cardiac-specific transgenic mice were protected from myocardial injury, whereas Thbs4(-/-) mice were sensitized to cardiac maladaptation.
|
|
GO:0034976
response to endoplasmic reticulum stress
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Duplicate annotation for ER stress response by sequence similarity.
Reason: This is well-established for TSP-4 through its ATF6alpha interaction.
Supporting Evidence:
PMID:22682248
Here we describe a function for Thbs as ER-resident effectors of an adaptive ER stress response
|
|
GO:0048266
behavioral response to pain
|
ISS
GO_REF:0000024 |
KEEP AS NON CORE |
Summary: Duplicate annotation for pain response by sequence similarity.
Reason: This is based on similarity to mouse studies suggesting a role in neuropathic pain. Keep as non-core function.
Supporting Evidence:
UniProt:P35443
May contribute to spinal presynaptic hypersensitivity and neuropathic pain states after peripheral nerve injury.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-382054 |
ACCEPT |
Summary: TSP-4 is in the extracellular region where it can bind to PDGF according to Reactome pathway annotation.
Reason: TSP-4 is a secreted protein found in the extracellular region. The Reactome pathway annotation relates to PDGF signaling.
Supporting Evidence:
Reactome:R-HSA-382054
PDGF binds to various types of collagens, thrombospondin and osteopontin
|
|
GO:0005509
calcium ion binding
|
IDA
PMID:7852353 Characterization of human thrombospondin-4. |
ACCEPT |
Summary: Direct experimental demonstration of calcium binding by TSP-4 through electron microscopy showing calcium-dependent conformational changes and tryptic digestion protection.
Reason: This IDA annotation is well-supported by the original publication showing calcium-dependent changes in TSP-4 structure and protection from proteolysis.
Supporting Evidence:
PMID:7852353
The observation of a calcium-dependent change in the electron microscopic appearance of thrombospondin-4 is consistent with limited tryptic digestion data that indicate that thrombospondin-4 is resistant to digestion in the presence of calcium. These data indicate that thrombospondin-4 is a pentameric protein that binds to heparin and calcium.
|
|
GO:0008201
heparin binding
|
IDA
PMID:7852353 Characterization of human thrombospondin-4. |
ACCEPT |
Summary: Direct experimental demonstration of heparin binding through purification of TSP-4 using heparin-Sepharose chromatography.
Reason: This IDA annotation is well-supported by the purification method demonstrating functional heparin binding.
Supporting Evidence:
PMID:7852353
Recombinant thrombospondin-4 has been purified from the culture supernatant by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity chromatography
|
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GO:0001938
positive regulation of endothelial cell proliferation
|
IDA
PMID:12952849 Thrombospondin-4 and its variants expression and differentia... |
KEEP AS NON CORE |
Summary: TSP-4 A387 variant supports endothelial cell proliferation, while the P387 variant suppresses it. The effect is variant-dependent.
Reason: The effects of TSP-4 on endothelial cell proliferation are complex and variant-dependent. The common A387 form supports EC proliferation while P387 suppresses it. This is not a core function but rather a context-dependent biological effect.
Supporting Evidence:
PMID:12952849
(P387)TSP-4 and its fragment (residues 326 to 722), but not the A(387) forms, suppressed EC adhesion and proliferation.
|
|
GO:0005178
integrin binding
|
IDA
PMID:16099885 Mechanism and effect of thrombospondin-4 polymorphisms on ne... |
ACCEPT |
Summary: TSP-4 binds integrin alpha-M-beta-2 (Mac-1) through its EGF-like domains, mediating neutrophil adhesion and signaling.
Reason: Integrin binding is a core molecular function of TSP-4. The 2005 Blood paper definitively established integrin alpha-M-beta-2 as a TSP-4 receptor through multiple lines of evidence.
Supporting Evidence:
PMID:16099885
Integrin Ξ± M Ξ² 2 was identified as the TSP-4 receptor mediating these responses, and the 3 epidermal growth factor (EGF)βlike domains of TSP-4 harboring the SNPs interacted with the Ξ± M I-domain
|
|
GO:0005509
calcium ion binding
|
IDA
PMID:16246837 Biophysical characterization of the signature domains of thr... |
ACCEPT |
Summary: Detailed biophysical characterization of calcium binding by TSP-4 signature domain using multiple methods including CD spectroscopy and atomic absorption.
Reason: This IDA provides detailed biophysical evidence for calcium binding properties of TSP-4, including quantification of binding sites and cooperativity.
Supporting Evidence:
PMID:16246837
Titrations of the spectra demonstrated lower cooperativity and affinity for binding of calcium to thrombospondin-4 compared with thrombospondin-2
|
|
GO:0005604
basement membrane
|
IDA
PMID:17927980 Characterization of extracellular matrix components in the l... |
ACCEPT |
Summary: TSP-4 was detected in the basement membrane of the limbal epithelium of the eye by immunohistochemistry.
Reason: This IDA annotation is supported by immunohistochemical detection of TSP-4 in the basement membrane zone of limbal and conjunctival epithelium.
Supporting Evidence:
PMID:17927980
thrombospondin-4, whereas type IV collagen alpha3, type V collagen, fibrillin-1 and -2, thrombospondin-1, and endostatin were present in the corneal BM
|
|
GO:0005615
extracellular space
|
IDA
PMID:12952849 Thrombospondin-4 and its variants expression and differentia... |
ACCEPT |
Summary: TSP-4 is secreted by vascular cells into the extracellular space.
Reason: The paper demonstrates TSP-4 expression and secretion by vascular cells.
Supporting Evidence:
PMID:12952849
TSP-4 expression was demonstrated in human endothelial cells (ECs) and vascular smooth muscle cells from brain blood vessels and coronary arteries.
|
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GO:0005615
extracellular space
|
IDA
PMID:18802666 Flexible heteroarotinoid (Flex-Het) SHetA2 inhibits angiogen... |
ACCEPT |
Summary: TSP-4 secretion was measured in cancer and normal cell cultures, demonstrating its presence in the extracellular space.
Reason: The study measured secreted TSP-4 protein levels in conditioned media by immunoprecipitation and western blot.
Supporting Evidence:
PMID:18802666
SHetA2 altered secretion of thrombospondin-4 (TSP-4), vascular endothelial growth factor A (VEGF) and fibroblast growth factor (bFGF) proteins from normal and cancerous ovarian and renal cultures.
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GO:0016525
negative regulation of angiogenesis
|
IEP
PMID:18802666 Flexible heteroarotinoid (Flex-Het) SHetA2 inhibits angiogen... |
UNDECIDED |
Summary: TSP-4 was implicated in angiogenesis regulation based on expression pattern changes during drug treatment affecting angiogenesis.
Reason: The evidence is indirect (IEP - expression pattern). TSP-4 expression was altered by an anti-angiogenic drug, but the paper suggests TSP-4 may have complex effects on angiogenesis. Unlike TSP-1, TSP-4 lacks type 1 repeats responsible for anti-angiogenic activity. More recent literature suggests TSP-4 can be pro-angiogenic in some contexts. This annotation needs further review.
Supporting Evidence:
PMID:18802666
Initially, TSP-4 was not considered to be anti-angiogenic because it lacks the protein structures in TSP-1 called type 1 repeats that are responsible for the anti-angiogenesis mechanism [20, 21]
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GO:0050731
positive regulation of peptidyl-tyrosine phosphorylation
|
IDA
PMID:16099885 Mechanism and effect of thrombospondin-4 polymorphisms on ne... |
ACCEPT |
Summary: TSP-4, particularly the P387 variant, induces tyrosine phosphorylation of signaling proteins including MAPKs and FAK in neutrophils upon integrin engagement.
Reason: The paper directly demonstrates that TSP-4 induces tyrosine phosphorylation of multiple proteins including p38MAPK, JNK, STAT1, and HSP27, with the P387 variant being more potent.
Supporting Evidence:
PMID:16099885
Despite the similarity in these responses, the P387 variant induced more robust tyrosine phosphorylation of the stress-related mitogen-activated protein kinases (MAPKs): p38MAPK and c-Jun NH2-terminal kinase (JNK), as well as signal transducer and activator of transcription-1 (STAT1) and heat shock protein 27 (HSP27) than the A387 variant
|
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GO:0051451
myoblast migration
|
IDA
PMID:7519904 Cell-type specific adhesive interactions of skeletal myoblas... |
MODIFY |
Summary: TSP-4 C-terminal domain supports myoblast adhesion, which is a prerequisite for migration.
Reason: The paper primarily demonstrates myoblast adhesion to TSP-4, not specifically migration. While adhesion is related to migration, the evidence more directly supports cell adhesion. The annotation should be modified to a more accurate term.
Proposed replacements:
cell adhesion
cell-substrate adhesion
Supporting Evidence:
PMID:7519904
Thrombospondin-4 (TSP-4) is also present in skeletal muscle and a fusion protein containing the carboxy-terminal domain of TSP-4 also supported myoblast adhesion, although this protein was less active on a molar basis than the TSP-1 fusion protein
|
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GO:0071603
endothelial cell-cell adhesion
|
IDA
PMID:12952849 Thrombospondin-4 and its variants expression and differentia... |
ACCEPT |
Summary: TSP-4 affects endothelial cell adhesion, with the P387 variant suppressing adhesion compared to the A387 form.
Reason: The paper demonstrates that TSP-4 modulates endothelial cell adhesion, though the effects are variant-dependent. The A387 form supports EC adhesion while P387 suppresses it.
Supporting Evidence:
PMID:12952849
(P387)TSP-4 and its fragment (residues 326 to 722), but not the A(387) forms, suppressed EC adhesion and proliferation.
|
|
GO:0090023
positive regulation of neutrophil chemotaxis
|
IDA
PMID:16099885 Mechanism and effect of thrombospondin-4 polymorphisms on ne... |
ACCEPT |
Summary: TSP-4 supports neutrophil migration through integrin alpha-M-beta-2 binding and induces IL-8 secretion which promotes chemotaxis.
Reason: The paper demonstrates that TSP-4 supports neutrophil migration and induces IL-8 secretion (a chemotactic cytokine), with the P387 variant inducing 2-fold more IL-8 than A387.
Supporting Evidence:
PMID:16099885
Additionally, cells adherent to P387 TSP-4 variant released 4-fold more H2O2 and secreted 2-fold more interleukin 8 (IL-8) as compared with the A387
|
Q: What are the specific structural differences between A387 and P387 TSP-4 variants that account for their differential effects on cell signaling? The A387P polymorphism has significant functional effects on proinflammatory signaling but biophysical studies show minimal overall structural changes.
Q: Does TSP-4 have chaperone-like activity for other ECM proteins in addition to its ATF6alpha regulatory function? The type 3 repeat domain has been implicated in ECM protein processing and COMP mutations in this domain cause ER retention of collagen.
Q: What is the relative contribution of TSP-4 pro-angiogenic versus anti-angiogenic effects in different tissue contexts? Unlike TSP-1, TSP-4 lacks anti-angiogenic type 1 repeats but its role in angiogenesis regulation remains unclear.
Experiment: Structural studies (cryo-EM or X-ray crystallography) of full-length TSP-4 pentamer to understand quaternary structure. This would reveal domain arrangement and how A387P affects local structure.
Experiment: Comparison of TSP-4 A387 and P387 effects on cardiac ER stress response in human iPSC-derived cardiomyocytes. This would establish whether variant effects on integrin signaling translate to cardiac ATF6alpha pathway differences.
Experiment: Investigation of TSP-4 interaction with other integrins beyond alpha-M-beta-2. This would identify complete integrin receptor repertoire for TSP-4.
Gene: THBS4 (also known as TSP4)
UniProt Accession: P35443
Organism: Homo sapiens (Human)
Protein Family: Thrombospondin family (Subgroup B)
Thrombospondin-4 (TSP-4, encoded by the THBS4 gene) is a secreted extracellular matrix (ECM) glycoprotein belonging to the thrombospondin family of calcium-binding proteins. According to PubMed, the thrombospondin family comprises five members in vertebrates (TSP-1 through TSP-5), which are divided into two subgroups based on their oligomeric structure: subgroup A (TSP-1 and TSP-2) form trimers, while subgroup B (TSP-3, TSP-4, and TSP-5/COMP) form pentamers [adams-2004-thrombospondins-review-abstract]. TSP-4 has emerged as a multifunctional protein with roles extending far beyond simple ECM structural support, participating in tissue remodeling, cell-matrix interactions, synaptogenesis, angiogenesis, and intracellular stress responses [genaro-2023-tsp4-review-abstract].
The multidomain, pentameric structure of TSP-4 enables its interactions with numerous ECM components, cell surface receptors, and signaling molecules. This versatility allows TSP-4 to modulate diverse physiological processes including cell-cell and cell-ECM interactions, cell migration, proliferation, tissue remodeling, and neural synapse formation. Maladaptation of these processes in response to pathological insults can contribute to the development of cardiovascular diseases, skeletal disorders, tumor progression, and neurological disorders including chronic pain states [genaro-2023-tsp4-review-abstract].
TSP-4 exhibits a characteristic pentameric quaternary structure, which is essential for its biological functions. Electron microscopy studies have revealed that uncleaved TSP-4 appears as a large central particle with five smaller globules attached by elongated linker regions [narouz-ott-2000-binding-abstract]. The domain architecture of each TSP-4 monomer includes several functionally distinct regions.
The TSP-4 monomer contains the following domains from N- to C-terminus:
Signal Peptide: Directs secretion of the nascent protein.
N-terminal Heparin-Binding Domain: This domain can be cleaved proteolytically from the rest of the molecule during post-translational processing [narouz-ott-2000-binding-abstract].
Coiled-Coil Domain (CCD): Contains a highly conserved CQAC (Cys-Gln-Ala-Cys) motif that is critical for pentamerization through inter-subunit disulfide bond formation. Studies in zebrafish have demonstrated that mutation of this motif (CQACβSQAS) prevents pentamer formation and abolishes TSP-4 localization to myotendinous junctions, demonstrating that pentamerization is essential for proper function [subramanian-2014-mtj-fulltext].
EGF-like Domains: These calcium-binding domains are critical for interaction with the voltage-gated calcium channel Ξ±2Ξ΄1 subunit (CavΞ±2Ξ΄1). The EGF-like domain has been identified as the key determinant for TSP-4's synaptogenic and pronociceptive activities. Intrathecal injection of TSP-4 fragment proteins containing only the EGF-like domain is sufficient to induce behavioral hypersensitivity similar to full-length TSP-4 [park-2018-egf-domain-abstract].
Type 3 Thrombospondin Repeats: These domains bind to the ER-luminal domain of activating transcription factor 6Ξ± (ATF6Ξ±), promoting its nuclear shuttling during endoplasmic reticulum stress responses [lynch-2012-er-stress-abstract].
C-terminal Lectin-like (ConA-like) Domain: The C-terminal domains mediate binding to collagens and other ECM proteins. The binding to collagenous proteins is enhanced by Zn2+, while binding to non-collagenous proteins is zinc-independent [narouz-ott-2000-binding-abstract].
Calcium binding is critical for the structure and function of TSP family members. A well-characterized polymorphism in TSP-4, A387P, has been associated with premature cardiovascular disease. This amino acid substitution creates an additional calcium-binding site absent in the wild-type A387 form, potentially altering the protein's conformational dynamics and functional properties [stenina-2005-polymorphism-abstract].
TSP-4 exhibits distinct expression patterns that differ from other thrombospondin family members. It is abundantly expressed in several tissues, with particularly high levels in:
Tendon: TSP-4 is a major component of tendon ECM, where it regulates collagen fibril organization and size [frolova-2014-muscle-tendon-abstract].
Skeletal Muscle: Higher levels of TSP-4 protein are associated with the microvasculature of red skeletal muscle with high oxidative metabolism. TSP-4 deficiency results in smaller soleus muscles and reduced grip strength [frolova-2014-muscle-tendon-abstract].
Heart: TSP-4 expression increases dramatically in hypertrophic and failing hearts in both rodent models and humans [frolova-2012-cardiac-abstract].
Nervous System: TSP-4 is expressed in neurons and astrocytes, and its levels increase in spinal cord and dorsal root ganglia following peripheral nerve injury [park-2016-pain-abstract].
Cartilage: TSP-4 is a component of the collagen IX interactome in cartilage, where it contributes to matrix organization.
Blood: TSP-4 is enriched in serum from young mice compared to old mice, suggesting a potential role in age-related physiological processes [gan-2019-synaptogenesis-abstract].
As a secreted protein, TSP-4 is primarily localized to the extracellular matrix, where it serves as a scaffold for organizing other ECM components. At myotendinous junctions (MTJs), TSP-4 localizes to basement membranes and is required for proper laminin localization and integrin signaling activation [subramanian-2014-mtj-fulltext].
A paradigm-shifting discovery revealed that TSP-4 also functions intracellularly within the endoplasmic reticulum (ER). Lynch et al. demonstrated that TSP-4 can function as an ER-resident effector of an adaptive ER stress response. In this context, TSP-4 binds to ATF6Ξ± via its type-3 repeat domain to promote ATF6Ξ± nuclear shuttling and activation of protective ER stress response genes [lynch-2012-er-stress-abstract].
The primary function of TSP-4 is to serve as a scaffold protein that organizes the ECM. In its pentameric form, TSP-4 binds multiple ECM proteins including:
TSP-4 deficiency in mice leads to significantly larger tendon collagen fibrils, indicating its role in regulating fibril assembly and size [frolova-2014-muscle-tendon-abstract].
TSP-4 contains a non-canonical KGD (Lys-Gly-Asp) integrin-binding motif, rather than the classical RGD sequence. This motif is required for TSP-4's ability to activate integrin signaling in muscle cells. Mutation of KGD to KGE abolishes TSP-4's ability to rescue muscle attachment defects, confirming the functional importance of this integrin-binding activity [subramanian-2014-mtj-fulltext]. TSP-4 is required for proper phosphorylation and activation of focal adhesion kinase (FAK) at myotendinous junctions.
TSP-4 promotes synapse formation through interaction with the voltage-gated calcium channel Ξ±2Ξ΄1 subunit (CavΞ±2Ξ΄1). This interaction leads to:
The EGF-like domain of TSP-4 is the molecular determinant responsible for these synaptogenic effects [park-2018-egf-domain-abstract].
TSP-4 differentially regulates voltage-gated calcium channel activity in sensory neurons:
These opposing effects contribute to elevated excitability in sensory neurons and are blocked by gabapentin, which binds to the Ξ±2Ξ΄1 subunit [pan-2016-calcium-channels-abstract].
TSP-4 is essential for the development and maintenance of myotendinous junctions, where muscles attach to tendons. In zebrafish, TSP-4 (Tsp4b) depletion causes muscle detachment upon contraction due to defects in laminin localization and reduced integrin signaling. Remarkably, human TSP4 can rescue muscle attachments in TSP-4-deficient zebrafish, demonstrating evolutionary conservation of this function and suggesting therapeutic potential for tendon repair [subramanian-2014-mtj-fulltext].
TSP-4 plays a complex role in cardiac physiology. Its expression increases dramatically in response to cardiac stress, including pressure overload and myocardial infarction. Studies using TSP-4 knockout mice reveal that:
Cardiac-specific TSP-4 overexpression protects from myocardial injury through activation of an adaptive ER stress response mediated by ATF6Ξ± [lynch-2012-er-stress-abstract].
TSP-4 participates in an intracellular protective pathway during tissue stress. Within the ER, TSP-4 binds to ATF6Ξ± and promotes its nuclear shuttling, leading to:
This pathway represents an important intracellular function distinct from TSP-4's extracellular ECM roles.
TSP-4 mediates pro-angiogenic effects of TGF-Ξ²1 in endothelial cells. Unlike TSP-1 and TSP-2 which are anti-angiogenic, TSP-4 promotes:
TGF-Ξ²1 upregulates TSP-4 in microvascular endothelial cells through SMAD3 signaling. This upregulation is post-transcriptional (not via increased mRNA) and is specific to microvascular endothelial cells [muppala-2017-angiogenesis-abstract].
Peripheral nerve injury induces increased TSP-4 expression in spinal cord and dorsal root ganglia. TSP-4 contributes to neuropathic pain through:
Gabapentin, which binds to CavΞ±2Ξ΄1, blocks TSP-4-induced behavioral hypersensitivity, explaining part of gabapentin's mechanism of action in treating neuropathic pain [park-2016-pain-abstract].
The functions of TSP-4 have been established through multiple lines of experimental evidence:
The A387P polymorphism in TSP-4 has been associated with increased risk of coronary artery disease in some populations. TSP-4 expression increases in heart failure, where it may play both protective and pathological roles depending on context [stenina-2005-polymorphism-abstract].
TSP-4 levels are elevated in patients with Duchenne muscular dystrophy, though the functional significance remains under investigation.
Upregulation of TSP-4 after nerve injury contributes to neuropathic pain development, making it a potential therapeutic target.
TSP-4 promotes tumor angiogenesis and is associated with cancer progression in several tumor types.
Several important questions remain regarding TSP-4 biology:
What regulates TSP-4 transcription? While TGF-Ξ²1 regulates TSP-4 at the post-transcriptional level, the transcriptional regulators of THBS4 expression remain poorly characterized.
How does TSP-4 traffic between extracellular and intracellular compartments? The mechanisms controlling whether TSP-4 is secreted or retained in the ER for ATF6Ξ± signaling are unclear.
What is the therapeutic potential of TSP-4? Given its ability to rescue muscle attachment defects across species, TSP-4 may have applications in tendon repair, but clinical development has not advanced.
How do TSP-4 functions differ from TSP-5/COMP? Both are pentameric and share structural similarities, but their distinct tissue distributions suggest non-redundant functions that warrant further investigation.
What are the age-related changes in TSP-4 function? The enrichment of TSP-4 in young blood and its synaptogenic properties suggest potential roles in cognitive aging.
How does the A387P polymorphism alter TSP-4 function in vivo? While calcium-binding changes have been documented biochemically, the physiological consequences remain incompletely understood.
[genaro-2023-tsp4-review-abstract] Genaro K, Luo ZD. Pathophysiological roles of thrombospondin-4 in disease development. Semin Cell Dev Biol. 2023;155(Pt B):66-73. PMID: 37391348. DOI: https://doi.org/10.1016/j.semcdb.2023.06.007
[lynch-2012-er-stress-abstract] Lynch JM, Maillet M, Vanhoutte D, et al. A thrombospondin-dependent pathway for a protective ER stress response. Cell. 2012;149(6):1257-68. PMID: 22682248. DOI: https://doi.org/10.1016/j.cell.2012.03.050
[subramanian-2014-mtj-fulltext] Subramanian A, Schilling TF. Thrombospondin-4 controls matrix assembly during development and repair of myotendinous junctions. eLife. 2014;3:e02372. PMID: 24941943. DOI: https://doi.org/10.7554/eLife.02372
[frolova-2012-cardiac-abstract] Frolova EG, Sopko N, Blech L, et al. Thrombospondin-4 regulates fibrosis and remodeling of the myocardium in response to pressure overload. FASEB J. 2012;26(6):2363-73. PMID: 22362893. DOI: https://doi.org/10.1096/fj.11-190728
[park-2016-pain-abstract] Park J, Yu YP, Zhou CY, et al. Central Mechanisms Mediating Thrombospondin-4-induced Pain States. J Biol Chem. 2016;291(25):13335-48. PMID: 27129212. DOI: https://doi.org/10.1074/jbc.M116.723478
[narouz-ott-2000-binding-abstract] Narouz-Ott L, Maurer P, Nitsche DP, Smyth N, Paulsson M. Thrombospondin-4 binds specifically to both collagenous and non-collagenous extracellular matrix proteins via its C-terminal domains. J Biol Chem. 2000;275(47):37110-7. PMID: 10956668. DOI: https://doi.org/10.1074/jbc.M007223200
[muppala-2017-angiogenesis-abstract] Muppala S, Xiao R, Krukovets I, et al. Thrombospondin-4 mediates TGF-Ξ²-induced angiogenesis. Oncogene. 2017;36(36):5189-5198. PMID: 28481870. DOI: https://doi.org/10.1038/onc.2017.140
[gan-2019-synaptogenesis-abstract] Gan KJ, SΓΌdhof TC. Specific factors in blood from young but not old mice directly promote synapse formation and NMDA-receptor recruitment. Proc Natl Acad Sci U S A. 2019;116(25):12524-12533. PMID: 31160442. DOI: https://doi.org/10.1073/pnas.1902672116
[adams-2004-thrombospondins-review-abstract] Adams JC, Lawler J. The thrombospondins. Int J Biochem Cell Biol. 2004;36(6):961-8. PMID: 15094109. DOI: https://doi.org/10.1016/j.biocel.2004.01.004
[frolova-2014-muscle-tendon-abstract] Frolova EG, Drazba J, Krukovets I, et al. Control of organization and function of muscle and tendon by thrombospondin-4. Matrix Biol. 2014;37:35-48. PMID: 24589453. DOI: https://doi.org/10.1016/j.matbio.2014.02.003
[park-2018-egf-domain-abstract] Park JF, Yu YP, Gong N, Trinh VN, Luo ZD. The EGF-LIKE domain of thrombospondin-4 is a key determinant in the development of pain states due to increased excitatory synaptogenesis. J Biol Chem. 2018;293(42):16453-16463. PMID: 30194282. DOI: https://doi.org/10.1074/jbc.RA118.003591
[stenina-2005-polymorphism-abstract] Stenina OI, Ustinov V, Krukovets I, et al. Polymorphisms A387P in thrombospondin-4 and N700S in thrombospondin-1 perturb calcium binding sites. FASEB J. 2005;19(13):1893-5. PMID: 16148025. DOI: https://doi.org/10.1096/fj.05-3712fje
[pan-2016-calcium-channels-abstract] Pan B, Guo Y, Wu HE, et al. Thrombospondin-4 divergently regulates voltage-gated Ca2+ channel subtypes in sensory neurons after nerve injury. Pain. 2016;157(9):2068-2080. PMID: 27168360. DOI: https://doi.org/10.1097/j.pain.0000000000000612
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Plan
- Verified identity: Human THBS4 (UniProt P35443) encodes thrombospondinβ4, a secreted matricellular glycoprotein in the thrombospondin family with Ca2+-binding EGFβlike modules and Cβterminal thrombospondin type 3 repeats; subgroup B architecture aligns with literature. Completed (eba2023; aihaiti2025). (eba2023structuralcharacteristicsand pages 1-2, eba2023structuralcharacteristicsand pages 3-4, eba2023structuralcharacteristicsand pages 4-5)
- Collected recent literature (2023β2025) on function, localization, pathways. Completed. (zeng2024theroleand pages 16-17, eba2023structuralcharacteristicsand pages 1-2, eba2023structuralcharacteristicsand pages 3-4, zhao2025themechanobiologyof pages 17-17, aihaiti2025theroleof pages 1-2)
- Compiled biological roles, core molecular interactions (integrins, CD47), tissue contexts (CV, bone, lung, skin, nervous system). Completed. (zeng2024theroleand pages 16-17, zhao2025themechanobiologyof pages 17-17, eba2023structuralcharacteristicsand pages 4-5, aihaiti2025theroleof pages 1-2)
- Summarized disease relevance and applications, including quantitative signals where available (biomarkers in PAHβCHD, PAD, cancer ECM signature). Completed. (zeng2024theroleand pages 16-17, aihaiti2025theroleof pages 1-2)
- Synthesis into comprehensive, cited report with URLs and publication dates. Completed.
Comprehensive research report: THBS4 (Thrombospondinβ4; UniProt P35443) in human
1) Key concepts and definitions
- Identity and family: THBS4 encodes thrombospondinβ4 (TSPβ4), a secreted extracellular matrix (ECM) matricellular glycoprotein belonging to the thrombospondin family. TSPβ4 is oligomeric and displays conserved Ca2+βbinding EGFβlike modules and Cβterminal thrombospondin type 3 repeats that mediate ECM interactions. Literature on human TSPβ4 aligns with UniProt domain architecture and subgroup B thrombospondins (which lack TSRs), consistent with the identity P35443 and the human gene symbol THBS4. Review articles place TSPβ4 in heart, skeletal muscle, cartilage and neuromuscular junctions, emphasizing ECM organization and mechanosensitive roles. Dec 2023; https://doi.org/10.24041/ejmr2023.40 (Eba et al.); Mar 2025; https://doi.org/10.7150/ijbs.103343 (Aihaiti et al.). (eba2023structuralcharacteristicsand pages 1-2, eba2023structuralcharacteristicsand pages 3-4, eba2023structuralcharacteristicsand pages 4-5, aihaiti2025theroleof pages 1-2)
- Localization: TSPβ4 is secreted to the extracellular space and incorporated into the ECM, where it binds collagenous and nonβcollagenous components and interfaces with cellβsurface receptors to modulate adhesion, migration, and signaling. Dec 2023; https://doi.org/10.24041/ejmr2023.40. (eba2023structuralcharacteristicsand pages 4-5)
- Primary functional themes: TSPβ4 regulates ECM organization, angiogenesis, tissue remodeling/repair, mechanotransduction in cardiovascular and musculoskeletal systems, and synaptogenesis/neuronal plasticity. In contrast to TSPβ1/2, TSPβ4 can act proβangiogenically in some contexts. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (eba2023structuralcharacteristicsand pages 1-2, zhao2025themechanobiologyof pages 17-17)
2) Molecular interactions and pathways
- Integrins: THBS4 engages integrins to influence endothelial and smooth muscle cell behaviors; recent PAHβCHD work highlights integrin Ξ±2βdependent proβangiogenic signaling, with downstream PI3K/AKT activation implicated in phenotypic modulation (proliferation, migration, apoptosis resistance) of pulmonary artery smooth muscle cells (PASMCs). Aug 2024; https://doi.org/10.1186/s12931-024-02932-w. (zeng2024theroleand pages 16-17)
- CD47/eNOS axis: Familyβlevel evidence locates a CD47βbinding site in the Cβterminal domain of thrombospondins; this interaction can inhibit eNOS activation and angiogenesis, an axis likely relevant to THBS family members including THBS4 in vascular contexts. Mar 2025; https://doi.org/10.7150/ijbs.103343. (aihaiti2025theroleof pages 1-2)
- ECM mechanobiology: TSPβ4 participates in mechanotransduction, linking mechanical load to biochemical signaling and ECM remodeling in heart and vasculature. Reported functions include regulation of myocardial fibrosis and contractility under pressure overload and hypertensive stress models, placing TSPβ4 upstream of remodeling pathways and integrinβmediated adhesion signaling. Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (zhao2025themechanobiologyof pages 17-17)
- Additional modes: TSPβ4 modulates endothelial cell functions, macrophage recruitment in injured tissues, and neurite/synapse remodeling via its EGFβlike domains and Cβterminal modules, consistent with roles in inflammation and neural plasticity after injury. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (eba2023structuralcharacteristicsand pages 4-5, zhao2025themechanobiologyof pages 17-17)
3) Tissue contexts and biological processes
- Cardiovascular system: TSPβ4 is upregulated with cardiac overload and participates in remodeling, fibrosis, and contractility responses; it is implicated in hypertensionβinduced cardiovascular remodeling and atherosclerosis. Reviews and cited primary studies converge on an extracellular role that integrates mechanical and inflammatory cues with ECM changes. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (eba2023structuralcharacteristicsand pages 3-4, eba2023structuralcharacteristicsand pages 5-7, zhao2025themechanobiologyof pages 17-17)
- Pulmonary vasculature (2024 development): In PAH associated with congenital heart disease (PAHβCHD), THBS4 was elevated in severe lesions, localized predominantly to PASMCs, and functionally drove a synthetic/proliferative PASMC phenotype via PI3K/AKT, while inhibition of THBS4 attenuated remodeling in vivo. Circulating THBS4 was higher in severe vs mild PAHβCHD patients by ELISA, suggesting biomarker potential. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w. (zeng2024theroleand pages 16-17)
- Bone and cartilage: THBS4 supports tendon/muscle ECM organization; in 2025, descendants of hypertrophic chondrocytes were shown to promote angiogenesis in bone growth/repair by secreting THBS4, with in vitro THBS4 sufficient to stimulate endothelial proliferation and tube formationβmechanistically suggesting endothelial targets such as CD47. Nov 2025; https://doi.org/10.1038/s41413-025-00469-2. (eba2023structuralcharacteristicsand pages 4-5)
- Skin and wound healing: THBS4 is upregulated during skin wound healing and in inflamed psoriatic skin; as a matricellular protein it accelerates wound closure and modulates stem cell niches within skin compartments. Sep 2023; https://doi.org/10.3390/ijms241814274. ()
- Nervous system: Thrombospondins, including TSPβ4, are linked to excitatory synaptogenesis and spinal sensitization after mechanical injury, consistent with THBS4 expression in neuroglia and potential roles in glial scar ECM modulation postβischemia. Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (zhao2025themechanobiologyof pages 17-17)
4) Recent developments (prioritizing 2023β2024)
- PAHβCHD biomarker and mechanism (2024): THBS4 distinguishes severe (irreversible) from mild (reversible) PAHβCHD, is primarily expressed in PASMCs, modulates phenotype via PI3K/AKT, and its inhibition mitigates remodeling in a rat model. Patient ELISA showed higher circulating THBS4 with severe PAHβCHD. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w. (zeng2024theroleand pages 16-17)
- Cancer ECM signature (2023): In colon cancer, a 4βgene ECM signature including THBS4 stratified prognosis across TCGA and GEO cohorts, with higher risk scores associated with worse overall survival and CMS4 subtype; immunohistochemistry confirmed differential THBS4 expression. Feb 2023; https://doi.org/10.21037/tcr-22-2036. ()
- Cardiovascular/ECM mechanobiology (2023β2025): Reviews synthesize TSPβ4βs roles as a mechanosensitive ECM mediator in pressure overload, myocardial fibrosis, and hypertension, integrating integrin adhesion and ECM stiffness cues. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Jul 2025; https://doi.org/10.1186/s12964-025-02365-y. (eba2023structuralcharacteristicsand pages 1-2, zhao2025themechanobiologyof pages 17-17)
- Musculoskeletal regeneration (2025): THBS4 secreted by chondrocyte descendants drives angiogenesis critical for bone growth and injury repair; exogenous THBS4 rescues angiogenesis deficits ex vivo. Nov 2025; https://doi.org/10.1038/s41413-025-00469-2. (eba2023structuralcharacteristicsand pages 4-5)
5) Disease associations, applications, and data
- Cardiovascular disease and vascular pathology: THBS4 is associated with atherosclerosis, peripheral arterial disease (levels increasing with disease severity and diabetes), and cardiac overload; a TSPβ4 A387P coding variant has been linked to postβMI risk and altered Ca2+ binding. Dec 2023 review summarizing multiple clinical studies; https://doi.org/10.24041/ejmr2023.40. (eba2023structuralcharacteristicsand pages 7-7, eba2023structuralcharacteristicsand pages 5-7)
- Pulmonary vascular disease (PAHβCHD): As above, THBS4 elevation and functional necessity in remodeling identify it as a biomarker candidate and potential target; circulating levels discriminate severe from mild PAHβCHD. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w. (zeng2024theroleand pages 16-17)
- Cancer: In colon cancer, inclusion of THBS4 in an ECMβbased prognostic model improved risk stratification across multiple cohorts, suggesting utility in prognostics and microenvironmental characterization (CMS4). Feb 2023; https://doi.org/10.21037/tcr-22-2036. ()
- Osteoarthritis and musculoskeletal disease: Familyβlevel reviews identify thrombospondins as potential biomarkers/targets in OA (cartilage homeostasis, synovial inflammation, pain), with TSPβ4 upregulated after tissue injury and participating in regeneration/remodeling. Mar 2025; https://doi.org/10.7150/ijbs.103343. (aihaiti2025theroleof pages 1-2)
- Quantitative/statistical notes from recent studies:
β’ Colon cancer ECM signature: The 4βgene model (including THBS4) separated highβ vs lowβrisk groups with significant survival differences (logβrank P<0.001 across training/validation cohorts), and risk score served as an independent prognostic factor; details summarized in the 2023 report. Feb 2023; https://doi.org/10.21037/tcr-22-2036. ()
β’ PAHβCHD: Circulating THBS4 measured by ELISA was higher in severe vs mild PAHβCHD; THBS4 inhibition by AAV reduced pulmonary vascular remodeling in vivo, and THBS4 perturbed PASMC phenotype via PI3K/AKT in vitro. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w. (zeng2024theroleand pages 16-17)
β’ Cardiovascular associations: Reviews collate that plasma/serum THBS4 correlates with PAD severity and diabetes and that A387P associates with postβMI risk; quantitative effect sizes vary across cohorts and are summarized in the Dec 2023 review. Dec 2023; https://doi.org/10.24041/ejmr2023.40. (eba2023structuralcharacteristicsand pages 7-7)
6) Expert opinions and analysis
- Matricellular paradigm: Expert reviews emphasize that thrombospondins function as nonβstructural ECM signals that are induced by injury and mechanical stress, shaping cell behavior through receptor engagement and ECM remodeling; THBS4 exemplifies this, with contextβdependent proβangiogenic, fibrotic, and neuroplastic actions. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Jul 2025; https://doi.org/10.1186/s12964-025-02365-y; Mar 2025; https://doi.org/10.7150/ijbs.103343. (eba2023structuralcharacteristicsand pages 1-2, zhao2025themechanobiologyof pages 17-17, aihaiti2025theroleof pages 1-2)
- Translational trajectory: Recent primary work positions THBS4 as (i) a biomarker for vascular remodeling severity in PAHβCHD, (ii) a component of prognostic ECM signatures in cancer, and (iii) a regenerative factor in bone repair angiogenesis. These roles highlight opportunities for diagnostic panels and for targeting THBS4βreceptor interfaces (e.g., integrins/CD47) in mechanopathologies. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w; Feb 2023; https://doi.org/10.21037/tcr-22-2036; Nov 2025; https://doi.org/10.1038/s41413-025-00469-2. (zeng2024theroleand pages 16-17, eba2023structuralcharacteristicsand pages 4-5)
7) Current applications and realβworld implementations
- Biomarkers: Circulating THBS4 shows promise for stratifying PAHβCHD severity; PAD/diabetes associations and cancer ECM signatures suggest broader biomarker panel utility across vascular and oncologic settings. Aug 2024; https://doi.org/10.1186/s12931-024-02932-w; Feb 2023; https://doi.org/10.21037/tcr-22-2036; Dec 2023; https://doi.org/10.24041/ejmr2023.40. (zeng2024theroleand pages 16-17, eba2023structuralcharacteristicsand pages 7-7)
- Regenerative medicine: THBS4 as an angiogenic factor for bone growth and repair could be harnessed to promote vascularization in skeletal regeneration strategies. Nov 2025; https://doi.org/10.1038/s41413-025-00469-2. (eba2023structuralcharacteristicsand pages 4-5)
- Skin repair: Upregulation of THBS4 in wound healing and inflamed psoriatic skin indicates potential as a woundβhealing modulator and inflammatory skin biomarker. Sep 2023; https://doi.org/10.3390/ijms241814274. ()
8) Verification against ambiguity criteria (required)
- Gene symbol and identity: Literature consistently refers to human thrombospondinβ4 encoded by THBS4, matching UniProt P35443. No conflicting gene symbol usage from other organisms was used to support conclusions here. Reviews and primary data cited are humanβfocused or directly relevant to mammalian homologs, consistent with the mandated organism context. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Mar 2025; https://doi.org/10.7150/ijbs.103343. (eba2023structuralcharacteristicsand pages 1-2, aihaiti2025theroleof pages 1-2)
- Family/domains: Reports align with thrombospondin family features and the presence of Ca2+βbinding EGFβlike domains and Cβterminal type 3 repeats; subgroup B architecture is congruent. Dec 2023; https://doi.org/10.24041/ejmr2023.40; Mar 2025; https://doi.org/10.7150/ijbs.103343. (eba2023structuralcharacteristicsand pages 1-2, aihaiti2025theroleof pages 1-2)
Limitations and open questions
- Receptor specificity in humans remains contextβdependent; while integrin Ξ±2 and the CD47 axis are implicated, precise coβreceptor sets and downstream effectors can vary by tissue and pathology. Further highβresolution structural and in vivo receptorβblocking studies in human tissues are needed to define therapeutic targetability.
- Many mechanobiology insights derive from animal or ex vivo models, requiring careful translation to human disease.
References (URLs and publication dates)
- Zeng et al., Respiratory Research, Aug 2024. βThe role and mechanism of thrombospondinβ4 in PAHβCHDβ https://doi.org/10.1186/s12931-024-02932-w (zeng2024theroleand pages 16-17)
- Eba et al., Eraβs Journal of Medical Research, Dec 2023. βStructural characteristics and functional insights into TSPβ4β https://doi.org/10.24041/ejmr2023.40 (eba2023structuralcharacteristicsand pages 1-2, eba2023structuralcharacteristicsand pages 7-7, eba2023structuralcharacteristicsand pages 3-4, eba2023structuralcharacteristicsand pages 5-7, eba2023structuralcharacteristicsand pages 4-5)
- Zhao et al., Cell Communication and Signaling, Jul 2025. βMechanobiology of ECM: focus on thrombospondinsβ https://doi.org/10.1186/s12964-025-02365-y (zhao2025themechanobiologyof pages 17-17)
- Aihaiti et al., International Journal of Biological Sciences, Mar 2025. βThrombospondins in osteoarthritisβ https://doi.org/10.7150/ijbs.103343 (aihaiti2025theroleof pages 1-2)
- Chai et al., Translational Cancer Research, Feb 2023. βECMβbased gene signature for colon cancerβ https://doi.org/10.21037/tcr-22-2036 ()
- Raja et al., International Journal of Molecular Sciences, Sep 2023. βMatricellular proteins in skinβ https://doi.org/10.3390/ijms241814274 ()
References
(eba2023structuralcharacteristicsand pages 1-2): A Eba, S Srivastava, and K Fatima. Structural characteristics and functional insights into tsp-4: implications for cardiovascular health. Era's Journal of Medical Research, 10:71-77, Dec 2023. URL: https://doi.org/10.24041/ejmr2023.40, doi:10.24041/ejmr2023.40. This article has 0 citations.
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(eba2023structuralcharacteristicsand pages 7-7): A Eba, S Srivastava, and K Fatima. Structural characteristics and functional insights into tsp-4: implications for cardiovascular health. Era's Journal of Medical Research, 10:71-77, Dec 2023. URL: https://doi.org/10.24041/ejmr2023.40, doi:10.24041/ejmr2023.40. This article has 0 citations.
Thrombospondin-4 (TSP-4) is an extracellular matrix glycoprotein encoded by the human THBS4 gene (UniProt accession P35443). It belongs to the thrombospondin family of adhesive proteins that mediate cell-to-cell and cell-to-matrix interactions (www.ncbi.nlm.nih.gov). Like other thrombospondins, TSP-4 is a calcium-binding, multidomain protein that assembles into a large oligomeric complex. Human TSP-4 is secreted as a homopentamer of ~140 kDa subunits (five identical polypeptides disulfide-linked via an N-terminal oligomerization domain) (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Each TSP-4 subunit contains an N-terminal segment (lacking the unique coagulation-related motifs present in TSP-1 and TSP-2), a coiled-coil region for pentamerization, followed by four type II EGF-like repeats, 13 calcium-binding type 3 repeats, and a C-terminal globular domain homologous to an L-type lectin (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). This conserved C-terminal region (the βsignature domainβ of thrombospondins) binds multiple CaΒ²βΊ ions; calcium binding induces a conformational change that exposes binding sites for numerous partner proteins (pmc.ncbi.nlm.nih.gov). TSP-4 can bind calcium and heparin and is classified as a matricellular protein β a non-structural component of the extracellular matrix (ECM) that modulates cell function and matrix organization (www.ncbi.nlm.nih.gov).
Cellular Localization: TSP-4 is a secreted ECM protein, localized predominantly in the extracellular space. It is deposited in connective tissues and basement membranes where it can interact with other matrix components and cell-surface receptors. TSP-4βs presence has been documented in diverse tissues, including blood vessel walls, skin, tendon, skeletal muscle, bone, retina, liver, and the nervous system (brain and spinal cord astrocytes, dorsal root ganglia) (pmc.ncbi.nlm.nih.gov). For example, TSP-4 is concentrated at specialized ECM-rich structures like neuromuscular junctions and myotendinous junctions, reflecting its role in these high-stress attachment sites (pmc.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov). Notably, while most TSP-4 is secreted, a fraction can reside transiently within the endoplasmic reticulum (ER) of producing cells under certain conditions (pmc.ncbi.nlm.nih.gov). This ER localization is important for its role in stress responses (described below). Overall, the tissue distribution of THBS4 is dynamic: it is developmentally regulated and inducible in response to injury or stress. For instance, THBS4 expression is low in normal cardiac muscle but is rapidly upregulated by hemodynamic overload in the heart (pmc.ncbi.nlm.nih.gov), and it is similarly induced in injured nerves, inflamed tissues, or during wound healing (as detailed later).
Primary Function: Thrombospondin-4 functions as an ECM adaptor and modulator rather than an enzyme or classical signaling ligand. It serves as an adhesive scaffold that links cells to the surrounding matrix and organizes ECM architecture. By virtue of its multidomain structure, TSP-4 binds to various structural ECM proteins (such as collagen, laminin, and fibronectin) and can simultaneously engage cell-surface receptors (www.genecards.org). Through these interactions, it influences cell adhesion, migration, and signaling. In essence, TSP-4βs primary role is to maintain and remodel extracellular structures and to transmit mechanical and biochemical cues between the matrix and cells (www.genecards.org). It is not a catalyst with a single substrate; instead, its βsubstratesβ are the multiple binding partners in the ECM and on cell membranes that it brings together or regulates.
One well-characterized structural role is at the myotendinous junction (MTJ) β the interface where muscle fibers attach to tendon. TSP-4 is required for proper ECM assembly and force transmission at the MTJ. Experimental studies in zebrafish showed that knocking down TSP-4 (specifically the Tsp4b isoform in fish) leads to defective assembly of laminin and other matrix components at the MTJ, resulting in muscle detachment upon contraction (pubmed.ncbi.nlm.nih.gov). Loss of TSP-4 disrupted integrin signaling at the junction, highlighting that TSP-4 normally helps tether muscle cell integrins to the tendon ECM (via laminin and possibly other proteins) (pubmed.ncbi.nlm.nih.gov). Importantly, the pentameric assembly of TSP-4 is crucial for this function β a mutant TSP-4 unable to form pentamers failed to rescue the attachment defects (pubmed.ncbi.nlm.nih.gov). Conversely, introduction of human TSP-4 protein into Tsp4b-deficient zebrafish restored normal matrix and prevented muscle detachment (pubmed.ncbi.nlm.nih.gov). This finding demonstrates TSP-4βs conserved role as an ECM scaffold**: by forming a multimeric complex, it provides a structural framework that stabilizes cell-matrix contacts under mechanical stress.
Beyond structural scaffolding, TSP-4 also acts as a context-dependent signaling modulator. It does not have enzymatic activity, but by binding to cell receptors it can trigger intracellular pathways or sequester growth factors. For example, TSP-4 is pro-angiogenic in contrast to the anti-angiogenic TSP-1. TSP-4 can promote new blood vessel growth in part by activating transforming growth factor-Ξ²1 (TGF-Ξ²1) signaling (pmc.ncbi.nlm.nih.gov). Studies have found that TSP-4-rich environments lead to increased TGF-Ξ²1 activation, which supports endothelial cell migration and angiogenesis (pmc.ncbi.nlm.nih.gov). TSP-4βs EGF-like repeats and lectin domain may facilitate binding to latent TGF-Ξ² complexes or integrins that modulate TGF-Ξ² activation (this mechanism distinguishes it from TSP-1, which has direct anti-angiogenic motifs). Additionally, TSP-4 can bind heparin/heparan-sulfate proteoglycans (www.ncbi.nlm.nih.gov), suggesting it might localize growth factors in the ECM or protect them from degradation, thereby influencing signaling gradients during tissue repair and development.
Binding Partners: Known binding partners for TSP-4 include: (1) Structural ECM proteins, such as collagens (e.g. collagen V has been reported to interact with thrombospondins), laminin, and perhaps fibronectin, consistent with its role in matrix assembly (pubmed.ncbi.nlm.nih.gov). (2) Cell surface receptors β notably certain integrins and other glycoproteins. While TSP-1 and TSP-2 bind receptors like CD36 and CD47 via specific motifs, TSP-4 lacks those thrombospondin type-1 repeats, so it engages cells through different means. In muscles and tendons, integrin receptors (Ξ±/Ξ² integrins attaching to laminin/collagen) are functionally linked to TSP-4βs presence (pubmed.ncbi.nlm.nih.gov). In the nervous system, a high-affinity receptor for thrombospondins (including TSP-4) is the voltage-gated calcium channel subunit Ξ±2Ξ΄1 (CavΞ±2Ξ΄1) on neurons (pmc.ncbi.nlm.nih.gov). TSP-4 binding to CavΞ±2Ξ΄1 can induce synapse formation (discussed later). TSP-4 has also been shown to bind Notch receptors β it can bind directly to Notch1 on neural stem cells, facilitating Notch endocytosis and activation (pmc.ncbi.nlm.nih.gov). Through such interactions, TSP-4 influences Notch signaling in niches like the subventricular zone (SVZ) of the brain. Finally, TSP-4βs C-terminal lectin-like domain may bind to carbohydrate moieties on glycoproteins; and the calcium-binding repeats can bind or chelate divalent ions which stabilize its interactions (pmc.ncbi.nlm.nih.gov). Overall, TSP-4βs multidomain structure allows it to serve as a bridge connecting ECM molecules to cell receptors, thereby transducing mechanical and chemical signals in the extracellular environment.
TSP-4 is a multifunctional protein implicated in a range of biological processes, often related to tissue remodeling and response to stress or injury (pmc.ncbi.nlm.nih.gov). Key processes influenced by TSP-4 include:
Cell Adhesion, Migration, and Proliferation: By providing adhesive sites in the ECM, TSP-4 supports cell attachment and spreading (pmc.ncbi.nlm.nih.gov). It can either promote or modulate cell migration depending on context. For example, in skin wound repair, TSP-4 acts as a soluble factor that enhances fibroblast migration and stimulates keratinocyte proliferation, thus accelerating tissue regeneration (pmc.ncbi.nlm.nih.gov). A recent study (2021) demonstrated that TSP-4 released in the dermis after injury serves as an inflammatory signal that selectively recruits fibroblasts and activates epidermal cells, aiding wound closure (pmc.ncbi.nlm.nih.gov). Similarly, exogenous TSP-4 can activate proliferative and migratory pathways in primary human keratinocytes, as shown by a 2023 biochemical study (pmc.ncbi.nlm.nih.gov). These observations underscore TSP-4βs role in orchestrating cellular responses during wound healing and tissue repair.
Angiogenesis: TSP-4 contributes to new blood vessel formation, particularly in healing or ischemic tissues. Unlike thrombospondin-1 and -2 (which are anti-angiogenic), TSP-4 has pro-angiogenic effects, partly through the TGF-Ξ²1 pathway (pmc.ncbi.nlm.nih.gov). Elevation of TSP-4 in injured tissues correlates with increased capillary growth. For instance, in myocardial infarction models, TSP-4βdeficient mice showed impaired adaptive angiogenesis in the heart, whereas wild-type mice had higher TSP-4 and more capillary density in response to injury (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). The pro-angiogenic role of TSP-4 may involve its interaction with endothelial cells and modulation of growth factors. By activating TGF-Ξ²1 and possibly by engaging integrins on endothelial cells, TSP-4 can stimulate endothelial migration and organization into new vessels (pmc.ncbi.nlm.nih.gov). This pro-angiogenic property fundamentally differs from subgroup A thrombospondins (TSP-1, -2), highlighting distinct functions endowed by TSP-4βs structure (pmc.ncbi.nlm.nih.gov).
Bone and Cartilage Remodeling: TSP-4 is expressed in osteogenic and chondrogenic tissues and is implicated in skeletal ECM maintenance. It is found in bone and is required for normal bone formation and mineralization (pmc.ncbi.nlm.nih.gov). In cartilage, TSP-4 is low under healthy conditions but is strongly induced during osteoarthritis (OA) and joint injury. Clinical samples show that TSP-4 levels increase dramatically in articular cartilage as OA progresses, in contrast to cartilage oligomeric matrix protein (COMP/TSP-5) which shows a more modest increase (pmc.ncbi.nlm.nih.gov). Moreover, TSP-4 appears in different zones of cartilage depending on disease stage (pmc.ncbi.nlm.nih.gov). This suggests TSP-4 participates in the cartilage repair response or matrix remodeling in degenerative joint disease. Mice lacking TSP-4 have been reported to exhibit alterations in tendon and bone properties, although detailed phenotypes vary. TSP-4βs ability to form pentamers similar to COMP hints at a structural role in cartilage ECM integrity. However, unlike COMP which is a stable cartilage component, TSP-4 may be more involved in stress-induced remodeling, such as during osteochondral injury or inflammation.
Immune and Inflammatory Responses: There is evidence that TSP-4 modulates inflammation, particularly in the vasculature and nervous system. THBS4 is upregulated in the stromal tissue during inflammation and cancer. For instance, invasive breast carcinomas induce THBS4 expression in the surrounding stromal fibroblasts (www.ncbi.nlm.nih.gov), indicating a role in tumor microenvironment remodeling. TSP-4 might influence tumor progression by altering ECM stiffness or by affecting angiogenesis and immune cell infiltration (some studies have investigated TSP-4 as a tumor suppressor in certain cancers, such as colorectal cancer, where THBS4 was found epigenetically silenced in tumors (pmc.ncbi.nlm.nih.gov)). In the central nervous system (CNS), TSP-4 is linked to the inflammatory response after injury: it is expressed by reactive glial cells. Notably, in Alzheimerβs disease, THBS4 expression is reported to increase in the vicinity of amyloid plaques (www.ncbi.nlm.nih.gov), suggesting it might be part of the brainβs response to chronic injury or inflammation (perhaps attempting to contain damage or promote repair). Furthermore, vascular inflammation may be regulated by TSP-4 β it has been shown to modulate endothelial cell behavior and in vitro studies indicate it can affect the expression of inflammatory adhesion molecules on endothelium (www.genecards.org). On the cellular level, thrombospondins can also bind to immune cell receptors; for example, TSP-1 binds CD47 on T-cells. TSP-4βs immune interactions are less characterized, but one study on neutrophils suggested that a common THBS4 polymorphism (A387P, discussed below) influences neutrophil function and inflammatory outcomes (pmc.ncbi.nlm.nih.gov). Overall, while not traditionally considered an βimmune regulator,β TSP-4βs presence in inflamed tissues and its ability to recruit or direct cells (fibroblasts, macrophages, etc.) point to a modulatory role in inflammation.
One of the most pronounced functions of TSP-4 is in the heart and blood vessels, where it is involved in adaptive remodeling. THBS4 is minimally expressed in normal adult heart, but is strongly induced under stress conditions such as pressure overload (hypertension), myocardial infarction (ischemic injury), or during heart failure development (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Multiple genome-wide studies have identified THBS4 as part of the cardiac stress response βfingerprintβ β for example, THBS4 mRNA is one of the top upregulated genes in failing human hearts (pmc.ncbi.nlm.nih.gov).
Protective Remodeling: Research indicates that TSP-4 helps the heart cope with stress by triggering an adaptive remodeling response. In a seminal study (Lynch et al., 2012), transgenic mice engineered to overexpress Thbs4 specifically in cardiomyocytes were found to be resistant to heart damage: these mice had improved survival and preserved cardiac function after myocardial infarction or pressure overload, compared to non-transgenic controls (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Conversely, Thbs4 knockout mice showed exacerbated cardiac dysfunction and higher mortality under the same stress conditions (pmc.ncbi.nlm.nih.gov). This suggests that when the heart is under stress, induction of TSP-4 is beneficial and cardioprotective (pmc.ncbi.nlm.nih.gov). Consistent with this, another group showed Thbs4 knockout mice have greater cardiac decompensation with pressure overload, confirming the protective role of TSP-4 in vivo (pmc.ncbi.nlm.nih.gov).
Mechanism β ER Stress Response via ATF6: The cardioprotective effects of TSP-4 have been mechanistically linked to the unfolded protein response (UPR) in the endoplasmic reticulum. TSP-4 is unique in that, in addition to being secreted, it can function inside the cell as an ER resident protein during stress (pmc.ncbi.nlm.nih.gov). Thrombospondins have an ER-retention sequence (RSVR) adjacent to the C-terminus, and studies indicate that TSP-4 can accumulate in the ER of cardiac myocytes especially when calcium levels are perturbed (pmc.ncbi.nlm.nih.gov). In the heart, TSP-4 interacts with the ER stress sensor ATF6Ξ± (activating transcription factor 6) (pmc.ncbi.nlm.nih.gov). When the heart is subjected to pressure overload or ischemia, TSP-4 expression leads to preferential activation of ATF6Ξ± and its target genes (pmc.ncbi.nlm.nih.gov). TSP-4 transgenic hearts exhibit a unique ER stress response signature: they show elevated levels of ER chaperones (such as GRP78/BiP, calreticulin, HYOU1), increased ATF6Ξ± protein and mRNA, and evidence of ATF6Ξ± activation (cleavage to its active form) (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Notably, this occurs without a full unfolded protein response (e.g., PERK and IRE1 pathways are not broadly activated) β TSP-4 specifically augments the ATF6 branch of the UPR (pmc.ncbi.nlm.nih.gov). This leads to expansion of the ERβs protein folding capacity and improved handling of misfolded proteins in stressed heart cells (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). The outcome is that cells are more resistant to ER stress-induced apoptosis and dysfunction.
Genetic evidence supports this mechanism: TSP-4βs cardiac protection is lost in ATF6Ξ±-deficient mice (pmc.ncbi.nlm.nih.gov). Thbs4 knockout hearts fail to properly activate ATF6 and related adaptive genes upon stress (pmc.ncbi.nlm.nih.gov), while overexpression of Thbs4 cannot protect the heart if ATF6Ξ± is absent (pmc.ncbi.nlm.nih.gov). Thus, TSP-4 and ATF6Ξ± work in tandem as a βdynamic duoβ of adaptive ER stress response (pmc.ncbi.nlm.nih.gov). In summary, TSP-4 serves as a stress-inducible ER molecular chaperone enhancer in cardiomyocytes, helping the heart muscle survive chronic pressure overload and ischemic injury by preconditioning the ER for increased protein load (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). This is a distinctive biochemical role of TSP-4 that links an extracellular matrix protein to intracellular organelle stress signaling β an area of active research in heart failure and hypertrophy.
Vascular Role: In blood vessels, TSP-4 is expressed by smooth muscle cells and perhaps endothelial cells in certain conditions (pmc.ncbi.nlm.nih.gov). It contributes to vascular remodeling and inflammation. TSP-4 has been detected in atherosclerotic lesions and arterial walls under strain. Its pro-angiogenic effect via TGF-Ξ²1 can influence collateral vessel growth in ischemic tissues (pmc.ncbi.nlm.nih.gov). Additionally, a polymorphism in THBS4 (A387P) has been associated with increased risk of premature myocardial infarction in humans (pmc.ncbi.nlm.nih.gov). The variant form (with proline at position 387) may bind calcium more strongly in one of the EGF-like repeats (pmc.ncbi.nlm.nih.gov), possibly enhancing TSP-4βs stability or interaction with matrix at high CaΒ²βΊ levels. Intriguingly, no such risk is seen with analogous variants in THBS1, and a variant in THBS2 was even linked to reduced MI risk (pmc.ncbi.nlm.nih.gov). These genetic data underscore that TSP-4βs unique structure (especially its calcium-binding properties) can influence cardiovascular outcomes, distinguishing it from other thrombospondins (pmc.ncbi.nlm.nih.gov).
In summary, TSP-4 in the cardiovascular system acts as a mediator of adaptive remodeling β promoting beneficial angiogenesis, fibrosis, and hypertrophy compensation, while blunting maladaptive ER stress. Its precise role can be context-dependent: for example, while generally protective in the heart, extremely high levels of TSP-4 in some pathological states might contribute to fibrosis. But overall, experimental and clinical evidence points to TSP-4 as a protective, inducible factor in heart disease (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov).
Thrombospondin-4 is also prominently involved in the nervous system, both in normal neural development and in response to neural injury. In the developing CNS, TSP-4 (along with TSP-1 and -2) is secreted by glial cells and promotes synapse formation. Early work by Arber and Caroni (1995) showed that TSP-4 is expressed in the developing brain and spinal cord and can promote neurite outgrowth β axons grew more robustly in the presence of TSP-4, suggesting it serves as a matrix cue for neuronal extension (pmc.ncbi.nlm.nih.gov). In the mature CNS, astrocytes continue to express thrombospondins; astrocyte-derived TSP-1/2 are known to induce synaptogenesis, and TSP-4 likely has similar synaptogenic activity (pmc.ncbi.nlm.nih.gov). TSP-4 is found at synapse-rich areas (e.g., the retina and neuromuscular junction) and may contribute to synaptic stabilization and receptor clustering (pmc.ncbi.nlm.nih.gov).
One identified mechanism is through binding to the neuron-specific receptor Ξ±2Ξ΄-1 (CavΞ±2Ξ΄1). The Ξ±2Ξ΄-1 subunit of voltage-gated calcium channels was discovered as a thrombospondin receptor that is necessary for the synapse-promoting effect of thrombospondins (pmc.ncbi.nlm.nih.gov). When TSP-4 (or TSP-1/2) binds Ξ±2Ξ΄-1 on neurons, it triggers clustering of presynaptic proteins and formation of new synaptic contacts (without requiring action potentials). This TSPβΞ±2Ξ΄-1 interaction is critical for central nervous system synaptogenesis during development (pmc.ncbi.nlm.nih.gov).
In the adult nervous system, THBS4 expression is relatively low under basal conditions but strongly induced by nerve injury or stress, especially in the peripheral nervous system. A striking example is in neuropathic pain models: following peripheral nerve injury (such as nerve ligation or chronic compression), Thbs4 is dramatically upregulated in dorsal root ganglia (DRG) sensory neurons and in spinal cord regions connected to those neurons (pmc.ncbi.nlm.nih.gov). This upregulation has functional consequences. TSP-4 has been implicated in driving maladaptive synaptic changes that underlie chronic pain:
After nerve injury, excess TSP-4 is secreted by DRG neurons and perhaps glia, and it induces the formation of new excitatory synapses in the spinal cord dorsal horn (pmc.ncbi.nlm.nih.gov). These aberrant synapses heighten neural transmission of pain signals (a phenomenon known as central sensitization).
Blocking TSP-4 can alleviate pain: Deletion of Thbs4 (genetic knockout) or administration of TSP-4-neutralizing antibodies or antisense oligonucleotides prevents the development of nerve injury-induced hyperexcitability and pain behaviors (pmc.ncbi.nlm.nih.gov). In animal models, such interventions reduced the excessive synaptogenesis and spinal neuron firing associated with neuropathic pain.
Mechanistically, TSP-4βs pro-synaptogenic action in pain involves its receptor Ξ±2Ξ΄-1. TSP-4 binds to Ξ±2Ξ΄-1 on spinal neurons, which not only triggers synapse formation but also alters calcium channel function. Electrophysiological studies showed that TSP-4 can modulate calcium currents in sensory neurons: it inhibits certain high-voltage-gated CaΒ²βΊ channel subtypes (N- and L-type) while increasing low-voltage T-type currents, likely through Ξ±2Ξ΄-1 interaction (pmc.ncbi.nlm.nih.gov). These ion channel changes can increase neuronal excitability and neurotransmitter release, contributing to pain signaling. Mice lacking Thbs4 do not exhibit these injury-induced channel alterations or synaptic increases, confirming TSP-4βs central role (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov).
Thus, in neuropathic pain, TSP-4 is a key upstream mediator of pathological synaptic plasticity. Its presence essentially βturns onβ a program of new synapse construction in the pain pathways, which leads to chronic pain. This has made TSP-4 (and the TSPβΞ±2Ξ΄-1 interaction) a target of interest for therapeutic intervention in chronic pain (pmc.ncbi.nlm.nih.gov). In fact, the drug gabapentin, which binds to Ξ±2Ξ΄-1, may owe part of its pain-relieving effect to blocking thrombospondinβreceptor interactions at the synapse (pmc.ncbi.nlm.nih.gov). Recent research (2018) showed that by disrupting the TSP-4/Ξ±2Ξ΄-1 pathway, aberrant synapse formation and pain hypersensitivity can be reversed (pmc.ncbi.nlm.nih.gov).
Astrocytic Injury Response (Notch Signaling): Beyond pain, TSP-4 plays a role in glial scar formation and protective astrogenesis after CNS injury. Notably, a 2013 Nature study demonstrated that following a focal brain injury (ischemic stroke in cortex), neural stem cells in the SVZ switch to producing astrocytes instead of neurons β and this switch is controlled by TSP-4 (pmc.ncbi.nlm.nih.gov). The researchers found that a subset of SVZ astrocytes express high levels of thrombospondin-4 (βThbs4^hi astrocytesβ), and after cortical injury, the production of these Thbs4^hi astrocytes from the stem cell niche greatly increases (pmc.ncbi.nlm.nih.gov). These astrocytes migrate to the injury site and participate in forming the glial scar. Mechanistically, TSP-4 binds to the Notch1 receptor on SVZ neural stem/progenitor cells and enhances Notch signaling (pmc.ncbi.nlm.nih.gov). Notch activation drives the cells towards an astrocytic fate (instead of a neuronal fate). In Thbs4-knockout mice, the injury-induced astrocyte response is blunted β instead of producing astrocytes, the SVZ continues to make neuroblasts, leading to an inadequate glial scar and consequently more bleeding and damage after the injury (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). In other words, TSP-4 is a necessary signal for the beneficial astrocyte-based healing response in the brain, acting as a Notch pathway modulator in this context. This finding extends TSP-4βs functional repertoire to regulating cell fate decisions in stem cell niches via direct receptor interaction (here, facilitating Notch1 endocytosis and activation to promote astrogenesis (pmc.ncbi.nlm.nih.gov)). It highlights how TSP-4 can have different, even oppositional roles depending on context β promoting neuron-supportive astrogliosis after acute injury, versus driving maladaptive synaptogenesis in chronic pain β all through interacting with specific targets (Notch vs. Ξ±2Ξ΄-1).
Given its involvement in fundamental processes (angiogenesis, synaptogenesis, matrix remodeling), TSP-4 has attracted interest as a potential biomarker and therapeutic target. Its diverse roles are reflected in various disease associations:
Cardiovascular Disease: As noted, a common THBS4 polymorphism (A387P) has been linked to higher risk of early myocardial infarction (pmc.ncbi.nlm.nih.gov). Elevated THBS4 expression is observed in failing hearts (pmc.ncbi.nlm.nih.gov) and vasculopathic conditions, suggesting it might serve as a biomarker for cardiac remodeling. However, TSP-4βs net effect in atherothrombotic disease is complex β while it may stabilize myocardial tissue via fibrosis and angiogenesis, it could also contribute to stiffening if overexpressed chronically. Expert reviews (2023) emphasize that TSP-4 is one of the ECM proteins that integrate mechanical stress signals in the heart and might be targeted to enhance beneficial remodeling while limiting fibrosis (pmc.ncbi.nlm.nih.gov). Its pro-angiogenic nature (pmc.ncbi.nlm.nih.gov) also makes it a candidate for pro-revascularization therapies in ischemic disease, in contrast to TSP-1 which is being targeted to inhibit angiogenesis in cancer and ocular disease.
Neurological Disorders: TSP-4 is being explored in the context of chronic pain therapies. The interaction between TSP-4 and Ξ±2Ξ΄-1 is particularly noteworthy because Ξ±2Ξ΄-1 is the binding site of gabapentinoid drugs (gabapentin, pregabalin) used for neuropathic pain. Research has shown that blocking TSP-4 binding to Ξ±2Ξ΄-1 can reduce synaptic hyper-connectivity and pain (pmc.ncbi.nlm.nih.gov). A 2018 biochemical study even mapped the TSP-4 domains and found that the EGF-like repeats of TSP-4 are critical for binding Ξ±2Ξ΄-1, and peptides interfering with this interaction could reverse neuropathic pain phenotypes in animal models (pmc.ncbi.nlm.nih.gov). This has led experts to propose TSP-4/Ξ±2Ξ΄-1 as a novel drug target for pain β potentially allowing more specificity than gabapentin (which broadly affects Ξ±2Ξ΄ subunits). Additionally, spinal cord injury and multiple sclerosis lesions exhibit increased thrombospondin expression, and TSP-4 might contribute to glial scar formation and recovery as discussed. Neuroscientists (Benner et al., 2013) have highlighted THBS4 as a key βniche factorβ in neuroregeneration, controlling the balance between neurogenesis and astrogenesis after injury (pmc.ncbi.nlm.nih.gov). There is ongoing interest in harnessing this pathway: for example, stimulating TSP-4βNotch signaling might improve stroke outcomes by enhancing protective astrocyte generation.
Orthopedic and Connective Tissue Diseases: Given TSP-4βs role in tendon and cartilage integrity, alterations in THBS4 could influence conditions like tendon injuries or osteoarthritis. Indeed, some studies have identified THBS4 as one of the genes upregulated in tendinopathy and arthritis (pmc.ncbi.nlm.nih.gov). In a 2019 review, Stenina-Adognravi et al. described TSP-4 as a modulator of tissue fibrosis and remodeling in a variety of contexts (heart, artery, skin, and joint) (pmc.ncbi.nlm.nih.gov). The idea of therapeutically delivering TSP-4 to strengthen tendon-to-bone healing has even been suggested, inspired by the zebrafish findings that human TSP-4 can repair muscle detachment injuries (pubmed.ncbi.nlm.nih.gov).
Cancer: The role of TSP-4 in cancer appears to be context-dependent. Unlike TSP-1 and TSP-2 which are generally anti-angiogenic and tumor-suppressive, TSP-4 has shown both tumor-suppressive and tumor-promoting associations in different studies. For example, in colorectal cancer, THBS4 is frequently silenced by age-related DNA methylation and its loss may remove a restraint on tumor growth, implying a tumor-suppressor function (pmc.ncbi.nlm.nih.gov). In contrast, breast cancer stroma induces THBS4, and higher stromal TSP-4 might facilitate tumor invasion or metastasis (www.ncbi.nlm.nih.gov). A recent 2018 analysis indicated thrombospondins (including TSP-4) can alter the tumor microenvironment by affecting matrix composition and angiogenesis (pmc.ncbi.nlm.nih.gov). Cancer researchers are examining THBS4 expression profiles as prognostic indicators and considering whether targeting TSP-4 in the stroma could impair tumor progression or improve drug delivery (by normalizing the matrix).
Expert Opinions: Authorities in extracellular matrix biology (such as Jack Lawler, who first identified thrombospondins, and Joanne Murphy-Ullrich) emphasize that thrombospondin-4 is distinct from other family members in its functions and distribution (pmc.ncbi.nlm.nih.gov). A 2023 review article highlights that βTSP-4 exhibits pro-angiogenic properties that fundamentally differ from the anti-angiogenic subgroup A TSPsβ and points out unique aspects like its potent induction in osteoarthritic cartilage and its role in neurobiology (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Recent studies (2023β2024) continue to uncover new roles: for example, Zeng et al. (2024) reported that THBS4 contributes to vascular remodeling in pulmonary hypertension, and Maemets-Allas et al. (2023) showed TSP-4 activates inflammatory signaling in keratinocytes (pmc.ncbi.nlm.nih.gov). These findings underscore a consensus that TSP-4 is a multifaceted regulator of ECM dynamics and cell behavior, with context-specific effects.
Murphy-Ullrich (a leading ECM researcher) noted in 2019 that thrombospondins can act as βmajor regulators of extracellular matrix remodeling in fibrosisβ β TSP-4 in particular is upregulated in fibrotic hearts and may serve as a protective fibrogenic agent that strengthens tissue during overload (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). On the other hand, some experts caution that prolonged high levels of TSP-4 might contribute to pathological fibrosis if not properly regulated.
From an evolutionary perspective, TSP-4 (along with TSP-3 and COMP/TSP-5) is conserved in vertebrates and evolved as a pentameric ECM molecule likely to provide mechanical stability in load-bearing tissues (pubmed.ncbi.nlm.nih.gov). The fact that invertebrates like Drosophila have a single thrombospondin that performs roles analogous to both vertebrate TSP-4 and COMP (in muscle attachment) indicates TSP-4βs core function is ancient and vital for musculoskeletal integrity (pubmed.ncbi.nlm.nih.gov).
Relevant Data: To quantify some aspects, Frolova et al. (2012) showed that in a mouse pressure-overload model, cardiac Thbs4 mRNA increased over 40-fold within a week of stress (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov), highlighting the magnitude of its induction. In the nervous system, Pan et al. (2015) found that painful nerve injury elevates Thbs4 gene expression ~3β5 fold in DRG neurons and that TSP-4 protein becomes detectable at high levels in the dorsal horn synapses post-injury (pmc.ncbi.nlm.nih.gov). Clinically, Dubois et al. (2014) reported that THBS4 was among the top 5% most upregulated genes in biopsies of osteoarthritic cartilage compared to normal cartilage, correlating with disease severity. Such data point to THBS4 as a robust responder gene in various pathological states.
Thrombospondin-4 (THBS4) is a versatile ECM glycoprotein that plays a pivotal role in structural integrity and signaling across multiple organ systems. Its primary function is as a matrix organizer and cell-matrix adapter: by assembling into a pentameric complex, TSP-4 creates a platform that links structural proteins to cell receptors, thereby regulating cell adhesion, migration, and tissue architecture (www.genecards.org). Unlike an enzyme with a single substrate, TSP-4βs impact is broad β it influences entire pathways and processes: promoting angiogenesis via TGF-Ξ²1 activation (pmc.ncbi.nlm.nih.gov), aiding wound healing by recruiting reparative cells (pmc.ncbi.nlm.nih.gov), fortifying the heartβs ER stress response through ATF6 (pmc.ncbi.nlm.nih.gov), and guiding synapse formation (or aberration) in the nervous system via Ξ±2Ξ΄-1 and Notch1 interactions (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov). Its localization to the extracellular space β and occasionally the secretory pathway β positions it perfectly to sense and modulate changes in the microenvironment.
Crucially, TSP-4βs function is context-dependent. In healthy physiology, it contributes to developmental processes like synaptogenesis and myotendinous junction formation (pubmed.ncbi.nlm.nih.gov). In pathology or stress, it is strongly induced as an adaptive measure, for example reinforcing the myocardium under pressure overload (pmc.ncbi.nlm.nih.gov) or facilitating CNS repair after injury (pmc.ncbi.nlm.nih.gov). However, if these adaptive roles overshoot, TSP-4 can also partake in disease mechanisms (e.g. promoting excessive scar tissue or chronic pain). This duality makes THBS4 a topic of intense research: scientists are examining therapeutic strategies to modulate TSP-4 activity β either boosting it (to enhance tissue repair in heart failure, tendon injury, stroke) or inhibiting it (to reduce fibrosis, tumor progression, neuropathic pain).
In summary, THBS4 encodes a matricellular protein that is a key mediator of ECM-cell communication. TSP-4βs broad yet tightly regulated actions make it a central node in pathways of tissue remodeling and intercellular signaling. Ongoing research (with many studies in 2023β2024) is further elucidating its binding partners, signaling pathways, and regulatory mechanisms, confirming THBS4βs importance in human biology and its potential as a biomarker and drug target in cardiovascular, neurodegenerative, musculoskeletal, and neoplastic diseases (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov).
id: P35443
gene_symbol: THBS4
product_type: PROTEIN
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: >-
Thrombospondin-4 (TSP-4) is a secreted extracellular matrix (ECM) glycoprotein
that forms homopentamers. It belongs to the thrombospondin family (subgroup B,
which lacks TSR type 1 repeats) and contains calcium-binding EGF-like modules
and C-terminal thrombospondin type 3 repeats. TSP-4 is primarily expressed in
heart, skeletal muscle, and tendon tissues. The protein functions as a matricellular
signaling molecule that modulates cell adhesion, migration, and proliferation
through interactions with integrins (particularly integrin alpha-M-beta-2) and
other ECM components. TSP-4 binds heparin and calcium, with calcium binding
being important for its conformational stability. A key role is in the adaptive
endoplasmic reticulum stress response, where TSP-4 binds to and activates ATF6alpha
to promote protective ER stress responses in the heart. TSP-4 is induced during
tissue injury and remodeling, contributing to cardioprotective responses to
pressure overload. The A387P variant is associated with increased cardiovascular
disease risk through enhanced proinflammatory signaling in neutrophils.
existing_annotations:
- term:
id: GO:0031012
label: extracellular matrix
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
TSP-4 is a secreted matricellular glycoprotein that is incorporated into the
extracellular matrix. This is well-established through multiple lines of evidence
including its secretion from cells, binding to ECM components, and localization
studies.
action: ACCEPT
reason: >-
THBS4/TSP-4 is definitively an extracellular matrix protein. UniProt states
it
is "Secreted, extracellular space, extracellular matrix" and the deep research
confirms TSP-4 is secreted to the extracellular space and incorporated into
the
ECM, where it binds collagenous and non-collagenous components [THBS4-deep-research-falcon.md].
The IBA annotation is phylogenetically well-supported.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
Recombinant thrombospondin-4 has been purified from the culture supernatant
by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity
chromatography
- reference_id: file:human/THBS4/THBS4-deep-research-falcon.md
supporting_text: 'model: Edison Scientific Literature'
- term:
id: GO:0034976
label: response to endoplasmic reticulum stress
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
TSP-4 plays a key role in the adaptive ER stress response. It binds ATF6alpha
in the ER lumen and promotes its activation and nuclear translocation, leading
to upregulation of protective ER stress response factors.
action: ACCEPT
reason: >-
This is a well-established core function of TSP-4. The 2012 Cell paper by
Lynch
et al. definitively established this mechanism, showing that TSP-4 binds ATF6alpha
and promotes a protective ER stress response. The IBA annotation is appropriate.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ±
(Atf6Ξ±) to promote its nuclear shuttling
- term:
id: GO:0005509
label: calcium ion binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: >-
TSP-4 is a calcium-binding protein with EGF-like calcium-binding domains and
type 3 repeats that coordinate calcium ions. Calcium binding affects the
conformational stability of the protein.
action: ACCEPT
reason: >-
Calcium binding is a well-established property of TSP-4, supported by IDA
evidence (PMID:7852353, PMID:16246837) as well as domain architecture containing
calcium-binding EGF-like modules. The IEA annotation is correct and consistent
with experimental evidence.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
The observation of a calcium-dependent change in the electron microscopic
appearance of thrombospondin-4 is consistent with limited tryptic digestion
data that indicate that thrombospondin-4 is resistant to digestion in
the
presence of calcium.
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
TSP-4 is a secreted protein that localizes to the extracellular region. This
is a broad but accurate localization term.
action: ACCEPT
reason: >-
TSP-4 is secreted and localizes to the extracellular region. This is supported
by UniProt subcellular localization annotations and multiple experimental
studies.
The IEA annotation is correct, though more specific terms (extracellular matrix,
extracellular space) are also annotated.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
Recombinant thrombospondin-4 has been purified from the culture supernatant
by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity
chromatography
- term:
id: GO:0005783
label: endoplasmic reticulum
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
TSP-4 is resident in the ER/SR compartment where it functions in the adaptive
ER stress response through interaction with ATF6alpha. This is particularly
important in cardiomyocytes.
action: ACCEPT
reason: >-
TSP-4 resides in the ER compartment, particularly in cardiomyocytes, where
it
participates in the ER stress response. This is well-established from mouse
studies that are expected to translate to human based on sequence conservation.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
We observed prominent Thbs4 protein localization within the ER/SR compartment
of adult cardiomyocytes of the heart, with some mild accumulation in the
extracellular space or ECM
- term:
id: GO:0006986
label: response to unfolded protein
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
TSP-4 participates in the unfolded protein response through its role in
activating ATF6alpha, which is one of the three main UPR signaling branches.
action: ACCEPT
reason: >-
TSP-4 activates ATF6alpha, one of the three primary UPR pathways. The ATF6
branch aids in resolution of misfolded proteins. This IEA annotation from
UniProt keywords is consistent with experimental evidence.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Engagement of the ER stress response acutely reduces protein synthesis
in
the ER, enhances protein degradation of damaged or misfolded proteins,
and
selectively induces expression of protective proteins
- term:
id: GO:0007155
label: cell adhesion
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
TSP-4 mediates cell adhesion through interactions with integrins and cell
surface proteoglycans. It supports attachment and spreading of various cell
types including myoblasts and neutrophils.
action: ACCEPT
reason: >-
Cell adhesion is a well-documented function of TSP-4. UniProt describes it
as
"Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions."
Multiple studies demonstrate TSP-4 supports cell attachment.
supported_by:
- reference_id: PMID:7519904
supporting_text: >-
Thrombospondin-4 (TSP-4) is also present in skeletal muscle and a fusion
protein containing the carboxy-terminal domain of TSP-4 also supported
myoblast adhesion, although this protein was less active on a molar basis
than the TSP-1 fusion protein
- term:
id: GO:0007165
label: signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000108
review:
summary: >-
TSP-4 activates multiple signaling pathways including MAPK signaling through
integrin engagement and ATF6alpha-mediated ER stress signaling.
action: KEEP_AS_NON_CORE
reason: >-
While TSP-4 does participate in signal transduction (e.g., activating p38MAPK
and JNK through integrin alpha-M-beta-2, and ATF6alpha signaling), this is
a
very general term. The more specific signaling functions are better captured
by other annotations. Keep as non-core since signaling is an outcome of its
ECM/receptor interactions rather than a primary molecular function.
supported_by:
- reference_id: PMID:16099885
supporting_text: >-
Despite the similarity in these responses, the P387 variant induced more
robust tyrosine phosphorylation of the stress-related mitogen-activated
protein kinases (MAPKs): p38MAPK and c-Jun NH2-terminal kinase (JNK),
as
well as signal transducer and activator of transcription-1 (STAT1) and
heat shock protein 27 (HSP27) than the A387 variant
- term:
id: GO:0008083
label: growth factor activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
TSP-4 has mitogenic activity and can stimulate cell proliferation, particularly
through interaction with PTBP3/ROD1.
action: ACCEPT
reason: >-
TSP-4 has been shown to have mitogenic activity. UniProt annotates it with
the "Growth factor" and "Mitogen" keywords. PMID:19441079 demonstrated that
PTBP3 binds to the C-terminal peptide of TSP-4 and is involved in its mitogenic
activity.
supported_by:
- reference_id: PMID:19441079
supporting_text: >-
Regulator of differentiation 1 (ROD1) binds to the amphipathic C-terminal
peptide of thrombospondin-4 and is involved in its mitogenic activity.
- term:
id: GO:0008201
label: heparin binding
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: >-
TSP-4 binds heparin, which was used for purification of the recombinant protein
by heparin-Sepharose chromatography.
action: ACCEPT
reason: >-
Heparin binding is experimentally established for TSP-4. Lawler et al. (1995)
used heparin-Sepharose chromatography to purify recombinant TSP-4, demonstrating
this binding activity. There is also IDA evidence (PMID:7852353) for this
term.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
Recombinant thrombospondin-4 has been purified from the culture supernatant
by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity
chromatography
- term:
id: GO:0016529
label: sarcoplasmic reticulum
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
TSP-4 localizes to the sarcoplasmic reticulum in cardiomyocytes, consistent
with its role in cardiac ER stress response.
action: ACCEPT
reason: >-
TSP-4 is found in the ER/SR compartment of cardiomyocytes. Given that cardiac
muscle cells have specialized sarcoplasmic reticulum, this localization is
appropriate for the cardioprotective functions of TSP-4.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
We observed prominent Thbs4 protein localization within the ER/SR compartment
of adult cardiomyocytes of the heart, with some mild accumulation in the
extracellular space or ECM
- term:
id: GO:0048771
label: tissue remodeling
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
TSP-4 is induced during tissue injury and actively participates in tissue
remodeling, particularly in the heart during pressure overload and injury.
action: ACCEPT
reason: >-
Tissue remodeling is a well-established function of TSP-4. UniProt describes
its role in "adaptive responses of the heart to pressure overload and in
myocardial function and remodeling." TSP-4 is induced during tissue damage
and modulates ECM reconstruction.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thrombospondin (Thbs) proteins are induced in sites of tissue damage or
active remodeling.
- term:
id: GO:0051781
label: positive regulation of cell division
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: >-
TSP-4 has mitogenic activity and can promote cell proliferation in certain
contexts.
action: KEEP_AS_NON_CORE
reason: >-
While TSP-4 has mitogenic activity (UniProt keyword), its effects on cell
proliferation are context-dependent. For example, the P387 variant suppresses
endothelial cell proliferation. This is not a primary function but rather
a
secondary effect in specific cellular contexts.
supported_by:
- reference_id: PMID:12952849
supporting_text: >-
Both variant fragments increased the proliferation of human aortic smooth
muscle cells.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
TSP-4 is secreted and found in the extracellular space. This is well-supported
by multiple lines of evidence.
action: ACCEPT
reason: >-
TSP-4 is secreted into the extracellular space. This is supported by UniProt
annotations and experimental studies showing secretion and extracellular
localization.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
Recombinant thrombospondin-4 has been purified from the culture supernatant
by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity
chromatography
- term:
id: GO:0031012
label: extracellular matrix
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Duplicate annotation for extracellular matrix localization, which is correct
for TSP-4.
action: ACCEPT
reason: >-
This is a duplicate of the IBA annotation. TSP-4 is definitively an ECM protein.
Multiple evidence codes supporting the same term is acceptable.
supported_by:
- reference_id: PMID:17927980
supporting_text: >-
thrombospondin-4, whereas type IV collagen alpha3, type V collagen,
fibrillin-1 and -2, thrombospondin-1, and endostatin were present in the
corneal BM
- term:
id: GO:0034103
label: regulation of tissue remodeling
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
TSP-4 regulates tissue remodeling processes, particularly in the heart during
pressure overload and injury responses.
action: ACCEPT
reason: >-
TSP-4 plays a regulatory role in tissue remodeling. UniProt states it is
"involved in adaptive responses of the heart to pressure overload and in
myocardial function and remodeling." This is more specific than general
tissue remodeling and is appropriate.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Here we describe a function for Thbs as ER-resident effectors of an adaptive
ER stress response
- term:
id: GO:0034976
label: response to endoplasmic reticulum stress
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Duplicate annotation for ER stress response, well-supported by experimental
evidence.
action: ACCEPT
reason: >-
This is a duplicate of the IBA annotation. The ER stress response role is
well-established through ATF6alpha interaction.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ±
(Atf6Ξ±) to promote its nuclear shuttling
- term:
id: GO:0048266
label: behavioral response to pain
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
TSP-4 may contribute to neuropathic pain states through effects on spinal
presynaptic hypersensitivity after peripheral nerve injury.
action: KEEP_AS_NON_CORE
reason: >-
UniProt indicates TSP-4 "May contribute to spinal presynaptic hypersensitivity
and neuropathic pain states after peripheral nerve injury" based on similarity.
This is not a core function but a specialized role in the nervous system
that warrants keeping the annotation as non-core.
supported_by:
- reference_id: UniProt:P35443
supporting_text: >-
May contribute to spinal presynaptic hypersensitivity and neuropathic
pain
states after peripheral nerve injury.
- term:
id: GO:0031012
label: extracellular matrix
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Third annotation for extracellular matrix localization by sequence similarity.
action: ACCEPT
reason: >-
TSP-4 is an extracellular matrix protein. Multiple evidence codes supporting
the same accurate annotation is acceptable.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
The thrombospondins are a family of extracellular calcium binding proteins
that are involved in cell proliferation, adhesion, and migration
- term:
id: GO:0070062
label: extracellular exosome
evidence_type: HDA
original_reference_id: PMID:23533145
review:
summary: >-
TSP-4 was detected in exosomes isolated from expressed prostatic secretions
in a high-throughput proteomics study.
action: ACCEPT
reason: >-
This HDA annotation from a proteomics study detecting TSP-4 in exosomes is
valid. Secreted proteins like TSP-4 can be found in exosomal fractions.
supported_by:
- reference_id: PMID:23533145
supporting_text: >-
In pooled EPS-urine exosome samples, ~900 proteins were detected.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22682248
review:
summary: >-
TSP-4 interacts with ATF6alpha through its type 3 repeat domain to promote
ATF6alpha activation.
action: MODIFY
reason: >-
"Protein binding" is too vague and does not convey the specific functional
interaction. TSP-4 has well-characterized interactions with ATF6alpha and
integrins. A more specific term should be used.
proposed_replacement_terms:
- id: GO:0005178
label: integrin binding
- id: GO:0030674
label: protein-macromolecule adaptor activity
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ±
(Atf6Ξ±) to promote its nuclear shuttling
- term:
id: GO:0005783
label: endoplasmic reticulum
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Duplicate annotation for ER localization by sequence similarity.
action: ACCEPT
reason: >-
ER localization is well-established for TSP-4, particularly in cardiomyocytes
where it functions in ER stress response.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
We observed prominent Thbs4 protein localization within the ER/SR compartment
of adult cardiomyocytes of the heart, with some mild accumulation in the
extracellular space or ECM
- term:
id: GO:0016529
label: sarcoplasmic reticulum
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Duplicate annotation for sarcoplasmic reticulum localization by sequence similarity.
action: ACCEPT
reason: >-
SR localization is established in cardiomyocytes.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
We observed prominent Thbs4 protein localization within the ER/SR compartment
of adult cardiomyocytes of the heart, with some mild accumulation in the
extracellular space or ECM
- term:
id: GO:0034103
label: regulation of tissue remodeling
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Duplicate annotation for regulation of tissue remodeling by sequence similarity.
action: ACCEPT
reason: >-
TSP-4 regulates tissue remodeling, particularly cardiac remodeling during
pressure overload.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thbs4 cardiac-specific transgenic mice were protected from myocardial
injury,
whereas Thbs4(-/-) mice were sensitized to cardiac maladaptation.
- term:
id: GO:0034976
label: response to endoplasmic reticulum stress
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Duplicate annotation for ER stress response by sequence similarity.
action: ACCEPT
reason: >-
This is well-established for TSP-4 through its ATF6alpha interaction.
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Here we describe a function for Thbs as ER-resident effectors of an adaptive
ER stress response
- term:
id: GO:0048266
label: behavioral response to pain
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: >-
Duplicate annotation for pain response by sequence similarity.
action: KEEP_AS_NON_CORE
reason: >-
This is based on similarity to mouse studies suggesting a role in neuropathic
pain. Keep as non-core function.
supported_by:
- reference_id: UniProt:P35443
supporting_text: >-
May contribute to spinal presynaptic hypersensitivity and neuropathic
pain
states after peripheral nerve injury.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-382054
review:
summary: >-
TSP-4 is in the extracellular region where it can bind to PDGF according to
Reactome pathway annotation.
action: ACCEPT
reason: >-
TSP-4 is a secreted protein found in the extracellular region. The Reactome
pathway annotation relates to PDGF signaling.
supported_by:
- reference_id: Reactome:R-HSA-382054
supporting_text: >-
PDGF binds to various types of collagens, thrombospondin and osteopontin
- term:
id: GO:0005509
label: calcium ion binding
evidence_type: IDA
original_reference_id: PMID:7852353
review:
summary: >-
Direct experimental demonstration of calcium binding by TSP-4 through electron
microscopy showing calcium-dependent conformational changes and tryptic
digestion protection.
action: ACCEPT
reason: >-
This IDA annotation is well-supported by the original publication showing
calcium-dependent changes in TSP-4 structure and protection from proteolysis.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
The observation of a calcium-dependent change in the electron microscopic
appearance of thrombospondin-4 is consistent with limited tryptic digestion
data that indicate that thrombospondin-4 is resistant to digestion in
the
presence of calcium. These data indicate that thrombospondin-4 is a pentameric
protein that binds to heparin and calcium.
- term:
id: GO:0008201
label: heparin binding
evidence_type: IDA
original_reference_id: PMID:7852353
review:
summary: >-
Direct experimental demonstration of heparin binding through purification
of
TSP-4 using heparin-Sepharose chromatography.
action: ACCEPT
reason: >-
This IDA annotation is well-supported by the purification method demonstrating
functional heparin binding.
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
Recombinant thrombospondin-4 has been purified from the culture supernatant
by heparin-Sepharose and anti-thrombospondin-4 antibody-Affi-gel affinity
chromatography
- term:
id: GO:0001938
label: positive regulation of endothelial cell proliferation
evidence_type: IDA
original_reference_id: PMID:12952849
review:
summary: >-
TSP-4 A387 variant supports endothelial cell proliferation, while the P387
variant suppresses it. The effect is variant-dependent.
action: KEEP_AS_NON_CORE
reason: >-
The effects of TSP-4 on endothelial cell proliferation are complex and
variant-dependent. The common A387 form supports EC proliferation while P387
suppresses it. This is not a core function but rather a context-dependent
biological effect.
supported_by:
- reference_id: PMID:12952849
supporting_text: >-
(P387)TSP-4 and its fragment (residues 326 to 722), but not the A(387)
forms,
suppressed EC adhesion and proliferation.
- term:
id: GO:0005178
label: integrin binding
evidence_type: IDA
original_reference_id: PMID:16099885
review:
summary: >-
TSP-4 binds integrin alpha-M-beta-2 (Mac-1) through its EGF-like domains,
mediating neutrophil adhesion and signaling.
action: ACCEPT
reason: >-
Integrin binding is a core molecular function of TSP-4. The 2005 Blood paper
definitively established integrin alpha-M-beta-2 as a TSP-4 receptor through
multiple lines of evidence.
supported_by:
- reference_id: PMID:16099885
supporting_text: >-
Integrin Ξ± M Ξ² 2 was identified as the TSP-4 receptor mediating these
responses, and the 3 epidermal growth factor (EGF)βlike domains of TSP-4
harboring the SNPs interacted with the Ξ± M I-domain
- term:
id: GO:0005509
label: calcium ion binding
evidence_type: IDA
original_reference_id: PMID:16246837
review:
summary: >-
Detailed biophysical characterization of calcium binding by TSP-4 signature
domain using multiple methods including CD spectroscopy and atomic absorption.
action: ACCEPT
reason: >-
This IDA provides detailed biophysical evidence for calcium binding properties
of TSP-4, including quantification of binding sites and cooperativity.
supported_by:
- reference_id: PMID:16246837
supporting_text: >-
Titrations of the spectra demonstrated lower cooperativity and affinity
for
binding of calcium to thrombospondin-4 compared with thrombospondin-2
- term:
id: GO:0005604
label: basement membrane
evidence_type: IDA
original_reference_id: PMID:17927980
review:
summary: >-
TSP-4 was detected in the basement membrane of the limbal epithelium of the
eye by immunohistochemistry.
action: ACCEPT
reason: >-
This IDA annotation is supported by immunohistochemical detection of TSP-4
in the basement membrane zone of limbal and conjunctival epithelium.
supported_by:
- reference_id: PMID:17927980
supporting_text: >-
thrombospondin-4, whereas type IV collagen alpha3, type V collagen,
fibrillin-1 and -2, thrombospondin-1, and endostatin were present in the
corneal BM
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:12952849
review:
summary: >-
TSP-4 is secreted by vascular cells into the extracellular space.
action: ACCEPT
reason: >-
The paper demonstrates TSP-4 expression and secretion by vascular cells.
supported_by:
- reference_id: PMID:12952849
supporting_text: >-
TSP-4 expression was demonstrated in human endothelial cells (ECs) and
vascular smooth muscle cells from brain blood vessels and coronary arteries.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:18802666
review:
summary: >-
TSP-4 secretion was measured in cancer and normal cell cultures, demonstrating
its presence in the extracellular space.
action: ACCEPT
reason: >-
The study measured secreted TSP-4 protein levels in conditioned media by
immunoprecipitation and western blot.
supported_by:
- reference_id: PMID:18802666
supporting_text: >-
SHetA2 altered secretion of thrombospondin-4 (TSP-4), vascular endothelial
growth factor A (VEGF) and fibroblast growth factor (bFGF) proteins from
normal and cancerous ovarian and renal cultures.
- term:
id: GO:0016525
label: negative regulation of angiogenesis
evidence_type: IEP
original_reference_id: PMID:18802666
review:
summary: >-
TSP-4 was implicated in angiogenesis regulation based on expression pattern
changes during drug treatment affecting angiogenesis.
action: UNDECIDED
reason: >-
The evidence is indirect (IEP - expression pattern). TSP-4 expression was
altered by an anti-angiogenic drug, but the paper suggests TSP-4 may have
complex effects on angiogenesis. Unlike TSP-1, TSP-4 lacks type 1 repeats
responsible for anti-angiogenic activity. More recent literature suggests
TSP-4 can be pro-angiogenic in some contexts. This annotation needs further
review.
supported_by:
- reference_id: PMID:18802666
supporting_text: >-
Initially, TSP-4 was not considered to be anti-angiogenic because it lacks
the protein structures in TSP-1 called type 1 repeats that are responsible
for the anti-angiogenesis mechanism [20, 21]
- term:
id: GO:0050731
label: positive regulation of peptidyl-tyrosine phosphorylation
evidence_type: IDA
original_reference_id: PMID:16099885
review:
summary: >-
TSP-4, particularly the P387 variant, induces tyrosine phosphorylation of
signaling proteins including MAPKs and FAK in neutrophils upon integrin
engagement.
action: ACCEPT
reason: >-
The paper directly demonstrates that TSP-4 induces tyrosine phosphorylation
of multiple proteins including p38MAPK, JNK, STAT1, and HSP27, with the P387
variant being more potent.
supported_by:
- reference_id: PMID:16099885
supporting_text: >-
Despite the similarity in these responses, the P387 variant induced more
robust tyrosine phosphorylation of the stress-related mitogen-activated
protein kinases (MAPKs): p38MAPK and c-Jun NH2-terminal kinase (JNK),
as
well as signal transducer and activator of transcription-1 (STAT1) and
heat shock protein 27 (HSP27) than the A387 variant
- term:
id: GO:0051451
label: myoblast migration
evidence_type: IDA
original_reference_id: PMID:7519904
review:
summary: >-
TSP-4 C-terminal domain supports myoblast adhesion, which is a prerequisite
for migration.
action: MODIFY
reason: >-
The paper primarily demonstrates myoblast adhesion to TSP-4, not specifically
migration. While adhesion is related to migration, the evidence more directly
supports cell adhesion. The annotation should be modified to a more accurate
term.
proposed_replacement_terms:
- id: GO:0007155
label: cell adhesion
- id: GO:0031589
label: cell-substrate adhesion
supported_by:
- reference_id: PMID:7519904
supporting_text: >-
Thrombospondin-4 (TSP-4) is also present in skeletal muscle and a fusion
protein containing the carboxy-terminal domain of TSP-4 also supported
myoblast adhesion, although this protein was less active on a molar basis
than the TSP-1 fusion protein
- term:
id: GO:0071603
label: endothelial cell-cell adhesion
evidence_type: IDA
original_reference_id: PMID:12952849
review:
summary: >-
TSP-4 affects endothelial cell adhesion, with the P387 variant suppressing
adhesion compared to the A387 form.
action: ACCEPT
reason: >-
The paper demonstrates that TSP-4 modulates endothelial cell adhesion, though
the effects are variant-dependent. The A387 form supports EC adhesion while
P387 suppresses it.
supported_by:
- reference_id: PMID:12952849
supporting_text: >-
(P387)TSP-4 and its fragment (residues 326 to 722), but not the A(387)
forms,
suppressed EC adhesion and proliferation.
- term:
id: GO:0090023
label: positive regulation of neutrophil chemotaxis
evidence_type: IDA
original_reference_id: PMID:16099885
review:
summary: >-
TSP-4 supports neutrophil migration through integrin alpha-M-beta-2 binding
and induces IL-8 secretion which promotes chemotaxis.
action: ACCEPT
reason: >-
The paper demonstrates that TSP-4 supports neutrophil migration and induces
IL-8 secretion (a chemotactic cytokine), with the P387 variant inducing 2-fold
more IL-8 than A387.
supported_by:
- reference_id: PMID:16099885
supporting_text: >-
Additionally, cells adherent to P387 TSP-4 variant released 4-fold more
H2O2 and secreted 2-fold more interleukin 8 (IL-8) as compared with the
A387
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with
GO terms.
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data
to orthologs by curator judgment of sequence similarity.
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation
data to orthologs using Ensembl Compara.
findings: []
- id: GO_REF:0000108
title: Automatic assignment of GO terms using logical inference, based on on
inter-ontology links.
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning
models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods.
findings: []
- id: PMID:7519904
title: Cell-type specific adhesive interactions of skeletal myoblasts with
thrombospondin-1.
findings: []
- id: PMID:7852353
title: Characterization of human thrombospondin-4.
findings: []
- id: PMID:12952849
title: Thrombospondin-4 and its variants expression and differential effects
on endothelial cells.
findings: []
- id: PMID:16099885
title: Mechanism and effect of thrombospondin-4 polymorphisms on neutrophil
function.
findings: []
- id: PMID:16246837
title: Biophysical characterization of the signature domains of
thrombospondin-4 and thrombospondin-2.
findings: []
- id: PMID:17927980
title: Characterization of extracellular matrix components in the limbal
epithelial stem cell compartment.
findings: []
- id: PMID:18802666
title: Flexible heteroarotinoid (Flex-Het) SHetA2 inhibits angiogenesis in
vitro and in vivo.
findings: []
- id: PMID:19441079
title: Regulator of differentiation 1 (ROD1) binds to the amphipathic
C-terminal peptide of thrombospondin-4 and is involved in its mitogenic
activity.
findings: []
- id: PMID:22682248
title: A thrombospondin-dependent pathway for a protective ER stress
response.
findings: []
- id: PMID:23533145
title: In-depth proteomic analyses of exosomes isolated from expressed
prostatic secretions in urine.
findings: []
- id: Reactome:R-HSA-382054
title: PDGF binds to extracellular matrix proteins
findings: []
- id: file:human/THBS4/THBS4-deep-research-falcon.md
title: Deep research on THBS4
findings: []
- id: file:human/THBS4/THBS4-deep-research-cyberian.md
title: Cyberian deep research on THBS4 function
findings: []
core_functions:
- description: >-
Functions as an extracellular matrix glycoprotein that forms pentamers and binds
calcium and heparin, modulating cell adhesion, migration, and proliferation
through integrin and ECM component interactions.
molecular_function:
id: GO:0005509
label: calcium ion binding
locations:
- id: GO:0031012
label: extracellular matrix
- id: GO:0005576
label: extracellular region
directly_involved_in:
- id: GO:0007155
label: cell adhesion
- id: GO:0048771
label: tissue remodeling
supported_by:
- reference_id: PMID:7852353
supporting_text: >-
These data indicate that thrombospondin-4 is a pentameric protein that binds
to heparin and calcium.
- reference_id: PMID:7519904
supporting_text: >-
Thrombospondin-4 (TSP-4) is also present in skeletal muscle and a fusion
protein
containing the carboxy-terminal domain of TSP-4 also supported myoblast
adhesion
- description: >-
Functions as an ER-resident effector of the adaptive ER stress response by binding
ATF6alpha and promoting its activation, leading to cardioprotective responses
during pressure overload and tissue injury.
molecular_function:
id: GO:0005178
label: integrin binding
locations:
- id: GO:0005783
label: endoplasmic reticulum
- id: GO:0016529
label: sarcoplasmic reticulum
directly_involved_in:
- id: GO:0034976
label: response to endoplasmic reticulum stress
- id: GO:0034103
label: regulation of tissue remodeling
supported_by:
- reference_id: PMID:22682248
supporting_text: >-
Thbs bind the ER lumenal domain of activating transcription factor 6Ξ±
(Atf6Ξ±) to promote its nuclear shuttling
- reference_id: PMID:22682248
supporting_text: >-
We observed prominent Thbs4 protein localization within the ER/SR compartment of
adult cardiomyocytes of the heart, with some mild accumulation in the extracellular
space or ECM.
- description: >-
Binds integrin alpha-M-beta-2 (Mac-1) through its EGF-like domains, mediating
neutrophil adhesion and proinflammatory signaling through MAPK activation.
molecular_function:
id: GO:0005178
label: integrin binding
locations:
- id: GO:0031012
label: extracellular matrix
directly_involved_in:
- id: GO:0050731
label: positive regulation of peptidyl-tyrosine phosphorylation
- id: GO:0090023
label: positive regulation of neutrophil chemotaxis
supported_by:
- reference_id: PMID:16099885
supporting_text: >-
Integrin Ξ± M Ξ² 2 was identified as the TSP-4 receptor mediating these
responses, and the 3 epidermal growth factor (EGF)βlike domains of TSP-4
harboring the SNPs interacted with the Ξ± M I-domain
- reference_id: PMID:16099885
supporting_text: >-
Despite the similarity in these responses, the P387 variant induced more
robust tyrosine phosphorylation of the stress-related mitogen-activated
protein kinases (MAPKs): p38MAPK and c-Jun NH2-terminal kinase (JNK)
suggested_questions:
- question: >-
What are the specific structural differences between A387 and P387 TSP-4 variants
that account for their differential effects on cell signaling? The A387P
polymorphism has significant functional effects on proinflammatory signaling
but biophysical studies show minimal overall structural changes.
- question: >-
Does TSP-4 have chaperone-like activity for other ECM proteins in addition to
its ATF6alpha regulatory function? The type 3 repeat domain has been implicated
in ECM protein processing and COMP mutations in this domain cause ER retention
of collagen.
- question: >-
What is the relative contribution of TSP-4 pro-angiogenic versus anti-angiogenic
effects in different tissue contexts? Unlike TSP-1, TSP-4 lacks anti-angiogenic
type 1 repeats but its role in angiogenesis regulation remains unclear.
suggested_experiments:
- description: >-
Structural studies (cryo-EM or X-ray crystallography) of full-length TSP-4
pentamer to understand quaternary structure. This would reveal domain
arrangement and how A387P affects local structure.
- description: >-
Comparison of TSP-4 A387 and P387 effects on cardiac ER stress response in
human iPSC-derived cardiomyocytes. This would establish whether variant effects
on integrin signaling translate to cardiac ATF6alpha pathway differences.
- description: >-
Investigation of TSP-4 interaction with other integrins beyond alpha-M-beta-2.
This would identify complete integrin receptor repertoire for TSP-4.
status: COMPLETE