TODO: Add description for TOLLIP
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0006511
ubiquitin-dependent protein catabolic process
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031624
ubiquitin conjugating enzyme binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043130
ubiquitin binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0002376
immune system process
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005768
endosome
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005769
early endosome
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0006914
autophagy
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0006954
inflammatory response
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043130
ubiquitin binding
|
IEA
GO_REF:0000002 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045087
innate immune response
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:14563850 Tom1, a VHS domain-containing protein, interacts with tollip... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14563850
2003 Oct 15. Tom1, a VHS domain-containing protein, interacts with tollip, ubiquitin, and clathrin.
|
|
GO:0005515
protein binding
|
IPI
PMID:16189514 Towards a proteome-scale map of the human protein-protein in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16189514
Towards a proteome-scale map of the human protein-protein interaction network.
|
|
GO:0005515
protein binding
|
IPI
PMID:16713569 A protein-protein interaction network for human inherited at... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16713569
A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.
|
|
GO:0005515
protein binding
|
IPI
PMID:19060904 An empirical framework for binary interactome mapping. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19060904
An empirical framework for binary interactome mapping.
|
|
GO:0005515
protein binding
|
IPI
PMID:19447967 Shifted Transversal Design smart-pooling for high coverage i... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19447967
Shifted Transversal Design smart-pooling for high coverage interactome mapping.
|
|
GO:0005515
protein binding
|
IPI
PMID:20936779 A human MAP kinase interactome. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20936779
A human MAP kinase interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:21903422 Mapping a dynamic innate immunity protein interaction networ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21903422
2011 Sep 8. Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.
|
|
GO:0005515
protein binding
|
IPI
PMID:21988832 Toward an understanding of the protein interaction network o... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21988832
Toward an understanding of the protein interaction network of the human liver.
|
|
GO:0005515
protein binding
|
IPI
PMID:25042851 Autophagic clearance of polyQ proteins mediated by ubiquitin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25042851
Jul 18. Autophagic clearance of polyQ proteins mediated by ubiquitin-Atg8 adaptors of the conserved CUET protein family.
|
|
GO:0005515
protein binding
|
IPI
PMID:25416956 A proteome-scale map of the human interactome network. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25416956
A proteome-scale map of the human interactome network.
|
|
GO:0005515
protein binding
|
IPI
PMID:25910212 Widespread macromolecular interaction perturbations in human... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25910212
Widespread macromolecular interaction perturbations in human genetic disorders.
|
|
GO:0005515
protein binding
|
IPI
PMID:27107014 An inter-species protein-protein interaction network across ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27107014
An inter-species protein-protein interaction network across vast evolutionary distance.
|
|
GO:0005515
protein binding
|
IPI
PMID:31515488 Extensive disruption of protein interactions by genetic vari... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31515488
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
|
|
GO:0005515
protein binding
|
IPI
PMID:32296183 A reference map of the human binary protein interactome. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32296183
Apr 8. A reference map of the human binary protein interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:32814053 Interactome Mapping Provides a Network of Neurodegenerative ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:33961781
2021 May 6. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
|
|
GO:0005515
protein binding
|
IPI
PMID:34524948 Global Proximity Interactome of the Human Macroautophagy Pat... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:34524948
2021 Sep 15. Global Proximity Interactome of the Human Macroautophagy Pathway.
|
|
GO:0005515
protein binding
|
IPI
PMID:35271311 OpenCell: Endogenous tagging for the cartography of human ce... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:35271311
2022 Mar 11. OpenCell: Endogenous tagging for the cartography of human cellular organization.
|
|
GO:0005515
protein binding
|
IPI
PMID:40205054 Multimodal cell maps as a foundation for structural and func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:40205054
Apr 9. Multimodal cell maps as a foundation for structural and functional genomics.
|
|
GO:0005150
interleukin-1, type I receptor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016604
nuclear body
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031624
ubiquitin conjugating enzyme binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031625
ubiquitin protein ligase binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032183
SUMO binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032991
protein-containing complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0033235
positive regulation of protein sumoylation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070498
interleukin-1-mediated signaling pathway
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
IDA
GO_REF:0000052 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:26320582 Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-P... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26320582
2015 Aug 27. Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding Mechanism.
|
|
GO:0005515
protein binding
|
IPI
PMID:31263572 Dominant TOM1 mutation associated with combined immunodefici... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31263572
Dominant TOM1 mutation associated with combined immunodeficiency and autoimmune disease.
|
|
GO:0005515
protein binding
|
IPI
PMID:15047686 Tollip and Tom1 form a complex and recruit ubiquitin-conjuga... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15047686
2004 Mar 26. Tollip and Tom1 form a complex and recruit ubiquitin-conjugated proteins onto early endosomes.
|
|
GO:0019897
extrinsic component of plasma membrane
|
IC
PMID:10854325 Tollip, a new component of the IL-1RI pathway, links IRAK to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10854325
Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor.
|
|
GO:0060090
molecular adaptor activity
|
IDA
PMID:10854325 Tollip, a new component of the IL-1RI pathway, links IRAK to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10854325
Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor.
|
|
GO:0070498
interleukin-1-mediated signaling pathway
|
IDA
PMID:10854325 Tollip, a new component of the IL-1RI pathway, links IRAK to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10854325
Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor.
|
|
GO:0060090
molecular adaptor activity
|
IDA
PMID:27368102 An ER-Associated Pathway Defines Endosomal Architecture for ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27368102
An ER-Associated Pathway Defines Endosomal Architecture for Controlled Cargo Transport.
|
|
GO:0019900
kinase binding
|
IPI
PMID:10854325 Tollip, a new component of the IL-1RI pathway, links IRAK to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10854325
Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor.
|
|
GO:0032991
protein-containing complex
|
IDA
PMID:10854325 Tollip, a new component of the IL-1RI pathway, links IRAK to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10854325
Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor.
|
|
GO:0005515
protein binding
|
IPI
PMID:11397809 IRAK1b, a novel alternative splice variant of interleukin-1 ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11397809
2001 Jun 7. IRAK1b, a novel alternative splice variant of interleukin-1 receptor-associated kinase (IRAK), mediates interleukin-1 signaling and has prolonged stability.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6798749 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-HSA-6798751 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0035578
azurophil granule lumen
|
TAS
Reactome:R-HSA-6798751 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0035580
specific granule lumen
|
TAS
Reactome:R-HSA-6798749 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070062
extracellular exosome
|
HDA
PMID:23533145 In-depth proteomic analyses of exosomes isolated from expres... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23533145
2013 Apr 23. In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
|
|
GO:0030855
epithelial cell differentiation
|
IEP
PMID:21492153 Analysis of proteomic changes induced upon cellular differen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21492153
Analysis of proteomic changes induced upon cellular differentiation of the human intestinal cell line Caco-2.
|
|
GO:0005515
protein binding
|
IPI
PMID:16412388 Recruitment of clathrin onto endosomes by the Tom1-Tollip co... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16412388
Recruitment of clathrin onto endosomes by the Tom1-Tollip complex.
|
|
GO:0036010
protein localization to endosome
|
IDA
PMID:16412388 Recruitment of clathrin onto endosomes by the Tom1-Tollip co... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16412388
Recruitment of clathrin onto endosomes by the Tom1-Tollip complex.
|
|
GO:0070062
extracellular exosome
|
HDA
PMID:19056867 Large-scale proteomics and phosphoproteomics of urinary exos... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19056867
2008 Dec 3. Large-scale proteomics and phosphoproteomics of urinary exosomes.
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446634 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446684 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446692 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446694 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446701 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446862 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446868 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-446894 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
IC
PMID:11441107 Cooperation of Toll-like receptor 2 and 6 for cellular activ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11441107
Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling.
|
|
GO:0007165
signal transduction
|
IPI
PMID:11441107 Cooperation of Toll-like receptor 2 and 6 for cellular activ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11441107
Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling.
|
|
GO:0035325
Toll-like receptor binding
|
IPI
PMID:11441107 Cooperation of Toll-like receptor 2 and 6 for cellular activ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11441107
Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling.
|
|
GO:0016310
phosphorylation
|
IDA
PMID:1085432 Malignant lymphoma and rheumatic symptoms. |
REMOVE |
Summary: MISANNOTATION with WRONG PMID: PMID:1085432 is about "Malignant lymphoma and rheumatic symptoms" from 1976 - completely unrelated to TOLLIP! Furthermore, TOLLIP is a signaling adapter protein, NOT a kinase. UniProt states TOLLIP "Inhibits IRAK1 phosphorylation and kinase activity" - it REGULATES kinases, not performs phosphorylation itself.
Supporting Evidence:
PMID:1085432
Malignant lymphoma and rheumatic symptoms.
|
|
GO:0045321
leukocyte activation
|
NAS
PMID:11441107 Cooperation of Toll-like receptor 2 and 6 for cellular activ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11441107
Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling.
|
id: Q9H0E2
gene_symbol: TOLLIP
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: 'TODO: Add description for TOLLIP'
alternative_products:
- id: Q9H0E2-1
name: '1'
- id: Q9H0E2-2
name: '2'
existing_annotations:
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0006511
label: ubiquitin-dependent protein catabolic process
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031624
label: ubiquitin conjugating enzyme binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043130
label: ubiquitin binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0002376
label: immune system process
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005768
label: endosome
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005769
label: early endosome
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0006914
label: autophagy
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0006954
label: inflammatory response
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043130
label: ubiquitin binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045087
label: innate immune response
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:14563850
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14563850
supporting_text: 2003 Oct 15. Tom1, a VHS domain-containing protein,
interacts with tollip, ubiquitin, and clathrin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16189514
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16189514
supporting_text: Towards a proteome-scale map of the human
protein-protein interaction network.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16713569
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16713569
supporting_text: A protein-protein interaction network for human
inherited ataxias and disorders of Purkinje cell degeneration.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19060904
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19060904
supporting_text: An empirical framework for binary interactome
mapping.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19447967
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19447967
supporting_text: Shifted Transversal Design smart-pooling for high
coverage interactome mapping.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20936779
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20936779
supporting_text: A human MAP kinase interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21903422
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21903422
supporting_text: 2011 Sep 8. Mapping a dynamic innate immunity protein
interaction network regulating type I interferon production.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21988832
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21988832
supporting_text: Toward an understanding of the protein interaction
network of the human liver.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25042851
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25042851
supporting_text: Jul 18. Autophagic clearance of polyQ proteins
mediated by ubiquitin-Atg8 adaptors of the conserved CUET protein
family.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25416956
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25416956
supporting_text: A proteome-scale map of the human interactome
network.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25910212
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25910212
supporting_text: Widespread macromolecular interaction perturbations
in human genetic disorders.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27107014
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27107014
supporting_text: An inter-species protein-protein interaction network
across vast evolutionary distance.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31515488
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:31515488
supporting_text: Extensive disruption of protein interactions by
genetic variants across the allele frequency spectrum in human
populations.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32296183
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:32296183
supporting_text: Apr 8. A reference map of the human binary protein
interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32814053
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:32814053
supporting_text: Interactome Mapping Provides a Network of
Neurodegenerative Disease Proteins and Uncovers Widespread Protein
Aggregation in Affected Brains.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:33961781
supporting_text: 2021 May 6. Dual proteome-scale networks reveal
cell-specific remodeling of the human interactome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:34524948
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:34524948
supporting_text: 2021 Sep 15. Global Proximity Interactome of the
Human Macroautophagy Pathway.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:35271311
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:35271311
supporting_text: '2022 Mar 11. OpenCell: Endogenous tagging for the cartography
of human cellular organization.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:40205054
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:40205054
supporting_text: Apr 9. Multimodal cell maps as a foundation for
structural and functional genomics.
- term:
id: GO:0005150
label: interleukin-1, type I receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016604
label: nuclear body
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031624
label: ubiquitin conjugating enzyme binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032183
label: SUMO binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0033235
label: positive regulation of protein sumoylation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070498
label: interleukin-1-mediated signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: GO_REF:0000052
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26320582
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26320582
supporting_text: 2015 Aug 27. Tom1 Modulates Binding of Tollip to
Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding
Mechanism.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31263572
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:31263572
supporting_text: Dominant TOM1 mutation associated with combined
immunodeficiency and autoimmune disease.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15047686
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15047686
supporting_text: 2004 Mar 26. Tollip and Tom1 form a complex and
recruit ubiquitin-conjugated proteins onto early endosomes.
- term:
id: GO:0019897
label: extrinsic component of plasma membrane
evidence_type: IC
original_reference_id: PMID:10854325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10854325
supporting_text: Tollip, a new component of the IL-1RI pathway, links
IRAK to the IL-1 receptor.
- term:
id: GO:0060090
label: molecular adaptor activity
evidence_type: IDA
original_reference_id: PMID:10854325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10854325
supporting_text: Tollip, a new component of the IL-1RI pathway, links
IRAK to the IL-1 receptor.
- term:
id: GO:0070498
label: interleukin-1-mediated signaling pathway
evidence_type: IDA
original_reference_id: PMID:10854325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10854325
supporting_text: Tollip, a new component of the IL-1RI pathway, links
IRAK to the IL-1 receptor.
- term:
id: GO:0060090
label: molecular adaptor activity
evidence_type: IDA
original_reference_id: PMID:27368102
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27368102
supporting_text: An ER-Associated Pathway Defines Endosomal
Architecture for Controlled Cargo Transport.
- term:
id: GO:0019900
label: kinase binding
evidence_type: IPI
original_reference_id: PMID:10854325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10854325
supporting_text: Tollip, a new component of the IL-1RI pathway, links
IRAK to the IL-1 receptor.
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: IDA
original_reference_id: PMID:10854325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10854325
supporting_text: Tollip, a new component of the IL-1RI pathway, links
IRAK to the IL-1 receptor.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11397809
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11397809
supporting_text: 2001 Jun 7. IRAK1b, a novel alternative splice
variant of interleukin-1 receptor-associated kinase (IRAK), mediates
interleukin-1 signaling and has prolonged stability.
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798749
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798751
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0035578
label: azurophil granule lumen
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798751
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0035580
label: specific granule lumen
evidence_type: TAS
original_reference_id: Reactome:R-HSA-6798749
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070062
label: extracellular exosome
evidence_type: HDA
original_reference_id: PMID:23533145
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23533145
supporting_text: 2013 Apr 23. In-depth proteomic analyses of exosomes
isolated from expressed prostatic secretions in urine.
- term:
id: GO:0030855
label: epithelial cell differentiation
evidence_type: IEP
original_reference_id: PMID:21492153
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21492153
supporting_text: Analysis of proteomic changes induced upon cellular
differentiation of the human intestinal cell line Caco-2.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16412388
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16412388
supporting_text: Recruitment of clathrin onto endosomes by the
Tom1-Tollip complex.
- term:
id: GO:0036010
label: protein localization to endosome
evidence_type: IDA
original_reference_id: PMID:16412388
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16412388
supporting_text: Recruitment of clathrin onto endosomes by the
Tom1-Tollip complex.
- term:
id: GO:0070062
label: extracellular exosome
evidence_type: HDA
original_reference_id: PMID:19056867
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19056867
supporting_text: 2008 Dec 3. Large-scale proteomics and
phosphoproteomics of urinary exosomes.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446634
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446684
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446692
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446694
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446701
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446862
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446868
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-446894
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IC
original_reference_id: PMID:11441107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11441107
supporting_text: 'Cooperation of Toll-like receptor 2 and 6 for cellular
activation by soluble tuberculosis factor and Borrelia burgdorferi outer
surface protein A lipoprotein: role of Toll-interacting protein and IL-1
receptor signaling molecules in Toll-like receptor 2 signaling.'
- term:
id: GO:0007165
label: signal transduction
evidence_type: IPI
original_reference_id: PMID:11441107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11441107
supporting_text: 'Cooperation of Toll-like receptor 2 and 6 for cellular
activation by soluble tuberculosis factor and Borrelia burgdorferi outer
surface protein A lipoprotein: role of Toll-interacting protein and IL-1
receptor signaling molecules in Toll-like receptor 2 signaling.'
- term:
id: GO:0035325
label: Toll-like receptor binding
evidence_type: IPI
original_reference_id: PMID:11441107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11441107
supporting_text: 'Cooperation of Toll-like receptor 2 and 6 for cellular
activation by soluble tuberculosis factor and Borrelia burgdorferi outer
surface protein A lipoprotein: role of Toll-interacting protein and IL-1
receptor signaling molecules in Toll-like receptor 2 signaling.'
- term:
id: GO:0016310
label: phosphorylation
evidence_type: IDA
original_reference_id: PMID:1085432
review:
summary: >-
MISANNOTATION with WRONG PMID: PMID:1085432 is about "Malignant lymphoma and
rheumatic symptoms" from 1976 - completely unrelated to TOLLIP! Furthermore,
TOLLIP is a signaling adapter protein, NOT a kinase. UniProt states TOLLIP
"Inhibits IRAK1 phosphorylation and kinase activity" - it REGULATES kinases,
not performs phosphorylation itself.
action: REMOVE
supported_by:
- reference_id: PMID:1085432
supporting_text: Malignant lymphoma and rheumatic symptoms.
- term:
id: GO:0045321
label: leukocyte activation
evidence_type: NAS
original_reference_id: PMID:11441107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11441107
supporting_text: 'Cooperation of Toll-like receptor 2 and 6 for cellular
activation by soluble tuberculosis factor and Borrelia burgdorferi outer
surface protein A lipoprotein: role of Toll-interacting protein and IL-1
receptor signaling molecules in Toll-like receptor 2 signaling.'
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with
GO terms
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular
Location vocabulary mapping, accompanied by conservative changes to GO
terms applied by UniProt
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation
data to orthologs using Ensembl Compara
findings: []
- id: PMID:1085432
title: Malignant lymphoma and rheumatic symptoms.
findings: []
- id: PMID:10854325
title: Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1
receptor.
findings: []
- id: PMID:11397809
title: IRAK1b, a novel alternative splice variant of interleukin-1
receptor-associated kinase (IRAK), mediates interleukin-1 signaling and
has prolonged stability.
findings: []
- id: PMID:11441107
title: 'Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble
tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein:
role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like
receptor 2 signaling.'
findings: []
- id: PMID:14563850
title: Tom1, a VHS domain-containing protein, interacts with tollip,
ubiquitin, and clathrin.
findings: []
- id: PMID:15047686
title: Tollip and Tom1 form a complex and recruit ubiquitin-conjugated
proteins onto early endosomes.
findings: []
- id: PMID:16189514
title: Towards a proteome-scale map of the human protein-protein interaction
network.
findings: []
- id: PMID:16412388
title: Recruitment of clathrin onto endosomes by the Tom1-Tollip complex.
findings: []
- id: PMID:16713569
title: A protein-protein interaction network for human inherited ataxias and
disorders of Purkinje cell degeneration.
findings: []
- id: PMID:19056867
title: Large-scale proteomics and phosphoproteomics of urinary exosomes.
findings: []
- id: PMID:19060904
title: An empirical framework for binary interactome mapping.
findings: []
- id: PMID:19447967
title: Shifted Transversal Design smart-pooling for high coverage
interactome mapping.
findings: []
- id: PMID:20936779
title: A human MAP kinase interactome.
findings: []
- id: PMID:21492153
title: Analysis of proteomic changes induced upon cellular differentiation
of the human intestinal cell line Caco-2.
findings: []
- id: PMID:21903422
title: Mapping a dynamic innate immunity protein interaction network
regulating type I interferon production.
findings: []
- id: PMID:21988832
title: Toward an understanding of the protein interaction network of the
human liver.
findings: []
- id: PMID:23533145
title: In-depth proteomic analyses of exosomes isolated from expressed
prostatic secretions in urine.
findings: []
- id: PMID:25042851
title: Autophagic clearance of polyQ proteins mediated by ubiquitin-Atg8
adaptors of the conserved CUET protein family.
findings: []
- id: PMID:25416956
title: A proteome-scale map of the human interactome network.
findings: []
- id: PMID:25910212
title: Widespread macromolecular interaction perturbations in human genetic
disorders.
findings: []
- id: PMID:26320582
title: Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate
via a Coupled Folding and Binding Mechanism.
findings: []
- id: PMID:27107014
title: An inter-species protein-protein interaction network across vast
evolutionary distance.
findings: []
- id: PMID:27368102
title: An ER-Associated Pathway Defines Endosomal Architecture for
Controlled Cargo Transport.
findings: []
- id: PMID:31263572
title: Dominant TOM1 mutation associated with combined immunodeficiency and
autoimmune disease.
findings: []
- id: PMID:31515488
title: Extensive disruption of protein interactions by genetic variants
across the allele frequency spectrum in human populations.
findings: []
- id: PMID:32296183
title: A reference map of the human binary protein interactome.
findings: []
- id: PMID:32814053
title: Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the
human interactome.
findings: []
- id: PMID:34524948
title: Global Proximity Interactome of the Human Macroautophagy Pathway.
findings: []
- id: PMID:35271311
title: 'OpenCell: Endogenous tagging for the cartography of human cellular organization.'
findings: []
- id: PMID:40205054
title: Multimodal cell maps as a foundation for structural and functional
genomics.
findings: []
- id: Reactome:R-HSA-446634
title: IRAK4 is activated by autophosphorylation
findings: []
- id: Reactome:R-HSA-446684
title: IRAK2 is phosphorylated downstream of IRAK4 following IL1 receptor
activation
findings: []
- id: Reactome:R-HSA-446692
title: IRAK1 binds to MYD88 within the IL1R complex
findings: []
- id: Reactome:R-HSA-446694
title: IRAK4 phosphorylates IRAK1
findings: []
- id: Reactome:R-HSA-446701
title: IRAK4-activated IRAK1 autophosphorylates
findings: []
- id: Reactome:R-HSA-446862
title: Hyperphosphorylated IRAK1 associates with TRAF6
findings: []
- id: Reactome:R-HSA-446868
title: The Interleukin 1 receptor complex binds Tollip
findings: []
- id: Reactome:R-HSA-446894
title: TRAF6 binding leads to IRAK1:TRAF6 release
findings: []
- id: Reactome:R-HSA-6798749
title: Exocytosis of specific granule lumen proteins
findings: []
- id: Reactome:R-HSA-6798751
title: Exocytosis of azurophil granule lumen proteins
findings: []