id: Q8WVT3
gene_symbol: TRAPPC12
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: >-
  TRAPPC12/TRAMM/TTC-15 is a moonlighting metazoan TRAPP/TRAPPIII-associated protein. In interphase it
  participates in TRAPP-dependent early secretory traffic between ER, ERGIC, and Golgi. During mitosis
  it leaves the TRAPP context and supports chromosome congression, kinetochore stability, and CENP-E
  recruitment. Its shared cellular roles are TRAPP/TRAPPII/TRAPPIII complex membership and TRAPP/RAB1
  trafficking; direct TRAPPC12-specific autophagy evidence is limited.
existing_annotations:
- term:
    id: GO:0005794
    label: Golgi apparatus
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: Golgi apparatus localization/activity context is supported for 
      TRAPPC12/TRAPP trafficking.
    action: ACCEPT
    reason: Accept as supported location/context. TRAPPC12 is mainly observed in 
      Golgi/perinuclear TRAPP context, and TRAPPC12 disease fibroblasts show rescued 
      Golgi fragmentation and delayed ER-to-Golgi/Golgi transport.
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - &id004
      reference_id: PMID:21525244
      supporting_text: C12 is largely found in punctae throughout the cell
    - &id003
      reference_id: PMID:21525244
      supporting_text: highly punctate with an obvious concentration of the punctae in 
        the perinuclear region
    - &id015
      reference_id: PMID:21525244
      supporting_text: RNAi against C8, C11, or C12 resulted in Golgi fragmentation
    - &id016
      reference_id: PMID:28777934
      supporting_text: Fibroblasts derived from all three individuals showed a 
        fragmented Golgi
    - &id007
      reference_id: PMID:28777934
      supporting_text: Protein transport from the endoplasmic reticulum to and through 
        the Golgi was delayed
- term:
    id: GO:0030008
    label: TRAPP complex
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: part_of
  review:
    summary: TRAPPC12 is a mammalian TRAPP complex component.
    action: ACCEPT
    reason: Accept as core cellular-component membership. TRAPPC12/TTC-15 is identified 
      as a stable mammalian TRAPP interactor, and UniProt describes it as a component of
      the multisubunit TRAPP complex.
    additional_reference_ids:
    - PMID:21525244
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    - PMID:25918224
    supported_by:
    - &id022
      reference_id: PMID:21525244
      supporting_text: TTC-15 (now designated TRAPPC12)
    - &id001
      reference_id: PMID:21525244
      supporting_text: C4orf41 and TTC-15 interact both with each other and with 
        previously characterized TRAPP subunits
    - &id002
      reference_id: PMID:21525244
      supporting_text: These results firmly establish the newly identified proteins as 
        stable TRAPP interactors
    - &id023
      reference_id: PMID:21525244
      supporting_text: endogenous C12 was observed to elute in the same 
        high-molecular-weight pool as TRAPP
    - &id024
      reference_id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
      supporting_text: Component of the multisubunit TRAPP (transport protein
    - &id025
      reference_id: PMID:25918224
      supporting_text: TRAMM cycles between its role in TRAPP in interphase cells
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Nuclear localization is supported for the mitotic TRAMM/TRAPPC12 branch.
    action: ACCEPT
    reason: Accept as a supported location for the moonlighting mitotic role. TRAMM 
      cofractionates with a nuclear marker, associates weakly with mitotic 
      chromosomes/kinetochores, and UniProt cites nuclear localization from 
      PMID:25918224.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - &id011
      reference_id: PMID:25918224
      supporting_text: cellular fractionation indicated that a small but reproducible 
        amount of TRAMM cofractionated with a nuclear marker
    - &id012
      reference_id: PMID:25918224
      supporting_text: Small amounts of TRAMM associated with chromosomes
    - &id013
      reference_id: PMID:25918224
      supporting_text: small amounts of TRAMM on chromosomes associate with ACA-positive
        structures representing the kinetochore
    - &id014
      reference_id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
      supporting_text: Nucleus {ECO:0000269|PubMed:25918224}
- term:
    id: GO:0005793
    label: endoplasmic reticulum-Golgi intermediate compartment
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: ERGIC localization/colocalization is supported for early TRAPP secretory 
      traffic.
    action: ACCEPT
    reason: Accept as supported location/context. TRAPPC12/C12 is part of the TRAPP 
      early secretory pathway, and C11/C12 depletion arrests VSV-G cargo in a 
      BFA-resistant ERGIC-associated compartment.
    additional_reference_ids:
    - PMID:21525244
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - &id005
      reference_id: PMID:21525244
      supporting_text: knockdowns of either C11 or C12 arrest a cargo protein in a 
        BFA-resistant compartment
    - &id006
      reference_id: PMID:21525244
      supporting_text: TRAPP functions either at ER exit sites or at peripheral ERGIC 
        (BFA-resistant) elements
    - &id019
      reference_id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
      supporting_text: Endoplasmic reticulum-Golgi intermediate
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  qualifier: enables
  review:
    summary: Generic protein binding is not informative for TRAPPC12 function.
    action: MARK_AS_OVER_ANNOTATED
    reason: Mark as over-annotated. TRAPPC12 interactions are better represented as 
      TRAPP/TRAPPIII complex membership or as CENP-E recruitment to kinetochore, not as 
      generic protein binding.
    additional_reference_ids:
    - PMID:21525244
    - PMID:25918224
    - PMID:32296183
    supported_by:
    - *id001
    - *id002
    - &id017
      reference_id: PMID:25918224
      supporting_text: prevented the recruitment of CENP-E to the kinetochore
    - &id018
      reference_id: PMID:25918224
      supporting_text: TRAMM-5D was able to recruit more CENP-E to kinetochores
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: NAS
  original_reference_id: PMID:27066478
  qualifier: located_in
  review:
    summary: Cytoplasm is a broad but reasonable location for TRAPPC12 
      soluble/peripheral TRAPP biology.
    action: ACCEPT
    reason: Accept as broad supported location/context. TRAPPC12 has 
      cytoplasmic/perinuclear/Golgi pools in early secretory traffic and a distinct 
      mitotic pool.
    additional_reference_ids:
    - PMID:21525244
    - PMID:25918224
    - Reactome:R-HSA-8877475
    supported_by:
    - *id003
    - *id004
    - reference_id: PMID:25918224
      supporting_text: the supernatant was kept as the cytoplasmic fraction
    - &id028
      reference_id: Reactome:R-HSA-8877475
      supporting_text: RAB1 nucleotide exchange is stimulated in these pathways by the 
        GEF activity of the multisubunit TRAPPC complexes II and III
- term:
    id: GO:0006888
    label: endoplasmic reticulum to Golgi vesicle-mediated transport
  evidence_type: NAS
  original_reference_id: PMID:27066478
  qualifier: involved_in
  review:
    summary: TRAPPC12 participates in early secretory ER-to-ERGIC/Golgi transport 
      through TRAPP/TRAPPIII.
    action: ACCEPT
    reason: Accept as a core process. Direct TRAPPC12 evidence supports early 
      ER-to-Golgi trafficking, ERGIC cargo arrest, Golgi fragmentation on depletion, and
      delayed ER-to-Golgi/Golgi transport in patient fibroblasts.
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    - Reactome:R-HSA-8877475
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - &id008
      reference_id: PMID:21525244
      supporting_text: ER-to-Golgi trafficking at a very early stage
    - *id005
    - *id006
    - &id020
      reference_id: PMID:21525244
      supporting_text: These results imply that the three novel TRAPP-associated 
        proteins function in the early secretory pathway
    - *id007
    - &id021
      reference_id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
      supporting_text: endoplasmic reticulum to Golgi apparatus trafficking at a very 
        early
    - &id009
      reference_id: Reactome:R-HSA-8877475
      supporting_text: RAB1 is involved in COPII-mediated anterograde traffic from the 
        endoplasmic reticulum to the ERGIC
- term:
    id: GO:0048208
    label: COPII vesicle coat assembly
  evidence_type: NAS
  original_reference_id: PMID:27066478
  qualifier: involved_in
  review:
    summary: The COPII coat assembly annotation captures early secretory context but 
      overstates TRAPPC12 as a coat-assembly factor.
    action: MODIFY
    reason: Modify to ER-to-Golgi vesicle-mediated transport. TRAPPC12 evidence supports
      early ER/ERGIC/Golgi trafficking in COPII-associated anterograde traffic, not 
      direct assembly of the COPII vesicle coat.
    proposed_replacement_terms:
    - &id010
      id: GO:0006888
      label: endoplasmic reticulum to Golgi vesicle-mediated transport
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    - Reactome:R-HSA-8877475
    supported_by:
    - *id008
    - *id005
    - *id006
    - *id007
    - *id009
- term:
    id: GO:0099022
    label: obsolete vesicle tethering
  evidence_type: NAS
  original_reference_id: PMID:27066478
  qualifier: involved_in
  review:
    summary: The obsolete vesicle-tethering annotation should not be retained as-is.
    action: MODIFY
    reason: Modify to ER-to-Golgi vesicle-mediated transport, the supported 
      TRAPPC12/TRAPP process. Mammalian TRAPP tethering remains unresolved and this GO 
      term is obsolete.
    proposed_replacement_terms:
    - *id010
    additional_reference_ids:
    - PMID:27066478
    - PMID:21525244
    - PMID:28777934
    supported_by:
    - reference_id: PMID:27066478
      supporting_text: evidence that any TRAPP complex acts as a membrane tether is 
        currently inconclusive
    - *id008
    - *id006
    - *id007
- term:
    id: GO:1990072
    label: TRAPPIII protein complex
  evidence_type: NAS
  original_reference_id: PMID:27066478
  qualifier: part_of
  review:
    summary: TRAPPC12 is modeled as a mammalian TRAPPIII-associated subunit.
    action: ACCEPT
    reason: Accept as core complex membership in the PN TRAPP bucket. The review 
      literature assigns TRAPPC12 to mammalian TRAPPIII, and Reactome models TRAPPCIII 
      in RAB1/autophagy context.
    additional_reference_ids:
    - PMID:27066478
    - PMID:21525244
    - Reactome:R-HSA-8877475
    supported_by:
    - &id029
      reference_id: PMID:27066478
      supporting_text: TRAPP III, which contains core TRAPP plus TrappC8, 11-13
    - *id001
    - *id002
    - reference_id: Reactome:R-HSA-8877475
      supporting_text: RAB1 and the TRAPPCIII complex play a role in the formation of 
        the pre-autophagosomal structure (PAS)
- term:
    id: GO:0005654
    label: nucleoplasm
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: Nucleoplasm is more specific than the accessible TRAMM/TRAPPC12 evidence 
      supports.
    action: MODIFY
    reason: Modify to nucleus. The seeded HPA-derived row may reflect nuclear 
      immunofluorescence, but the accessible full-text evidence supports 
      nuclear/chromosome/kinetochore association rather than nucleoplasm specifically.
    proposed_replacement_terms:
    - id: GO:0005634
      label: nucleus
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id011
    - *id012
    - *id013
    - *id014
- term:
    id: GO:0005794
    label: Golgi apparatus
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: Golgi apparatus localization/activity context is supported for 
      TRAPPC12/TRAPP trafficking.
    action: ACCEPT
    reason: Accept as supported location/context. TRAPPC12 is mainly observed in 
      Golgi/perinuclear TRAPP context, and TRAPPC12 disease fibroblasts show rescued 
      Golgi fragmentation and delayed ER-to-Golgi/Golgi transport.
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id004
    - *id003
    - *id015
    - *id016
    - *id007
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21525244
  qualifier: enables
  review:
    summary: Generic protein binding is not informative for TRAPPC12 function.
    action: MARK_AS_OVER_ANNOTATED
    reason: Mark as over-annotated. TRAPPC12 interactions are better represented as 
      TRAPP/TRAPPIII complex membership or as CENP-E recruitment to kinetochore, not as 
      generic protein binding.
    additional_reference_ids:
    - PMID:21525244
    - PMID:25918224
    - PMID:32296183
    supported_by:
    - *id001
    - *id002
    - *id017
    - *id018
- term:
    id: GO:0005793
    label: endoplasmic reticulum-Golgi intermediate compartment
  evidence_type: IMP
  original_reference_id: PMID:21525244
  qualifier: colocalizes_with
  review:
    summary: ERGIC localization/colocalization is supported for early TRAPP secretory 
      traffic.
    action: ACCEPT
    reason: Accept as supported location/context. TRAPPC12/C12 is part of the TRAPP 
      early secretory pathway, and C11/C12 depletion arrests VSV-G cargo in a 
      BFA-resistant ERGIC-associated compartment.
    additional_reference_ids:
    - PMID:21525244
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id005
    - *id006
    - *id019
- term:
    id: GO:0006888
    label: endoplasmic reticulum to Golgi vesicle-mediated transport
  evidence_type: IMP
  original_reference_id: PMID:21525244
  qualifier: involved_in
  review:
    summary: TRAPPC12 participates in early secretory ER-to-ERGIC/Golgi transport 
      through TRAPP/TRAPPIII.
    action: ACCEPT
    reason: Accept as a core process. Direct TRAPPC12 evidence supports early 
      ER-to-Golgi trafficking, ERGIC cargo arrest, Golgi fragmentation on depletion, and
      delayed ER-to-Golgi/Golgi transport in patient fibroblasts.
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    - Reactome:R-HSA-8877475
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id008
    - *id005
    - *id006
    - *id020
    - *id007
    - *id021
    - *id009
- term:
    id: GO:0007030
    label: Golgi organization
  evidence_type: IMP
  original_reference_id: PMID:21525244
  qualifier: involved_in
  review:
    summary: Golgi organization is a direct TRAPPC12-depletion/disease phenotype but is 
      secondary to early secretory trafficking.
    action: KEEP_AS_NON_CORE
    reason: Keep as non-core. Golgi fragmentation is a useful readout of TRAPPC12/TRAPP 
      disruption and is disease-relevant, while the core process is ER-to-ERGIC/Golgi 
      trafficking.
    additional_reference_ids:
    - PMID:21525244
    - PMID:28777934
    supported_by:
    - *id015
    - *id016
    - *id020
- term:
    id: GO:0048471
    label: perinuclear region of cytoplasm
  evidence_type: IMP
  original_reference_id: PMID:21525244
  qualifier: colocalizes_with
  review:
    summary: Perinuclear cytoplasmic localization is supported for interphase 
      TRAPPC12/Golgi puncta.
    action: ACCEPT
    reason: Accept as a supported location for the interphase trafficking pool of 
      TRAPPC12.
    additional_reference_ids:
    - PMID:21525244
    - PMID:25918224
    supported_by:
    - *id003
    - *id004
    - reference_id: PMID:25918224
      supporting_text: TRAMM is largely localized to a perinuclear region representing 
        the Golgi
- term:
    id: GO:0030008
    label: TRAPP complex
  evidence_type: IDA
  original_reference_id: PMID:21525244
  qualifier: part_of
  review:
    summary: TRAPPC12 is a mammalian TRAPP complex component.
    action: ACCEPT
    reason: Accept as core cellular-component membership. TRAPPC12/TTC-15 is identified 
      as a stable mammalian TRAPP interactor, and UniProt describes it as a component of
      the multisubunit TRAPP complex.
    additional_reference_ids:
    - PMID:21525244
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    - PMID:25918224
    supported_by:
    - *id022
    - *id001
    - *id002
    - *id023
    - *id024
    - *id025
- term:
    id: GO:0000776
    label: kinetochore
  evidence_type: IDA
  original_reference_id: PMID:25918224
  qualifier: located_in
  review:
    summary: Kinetochore localization is weak/transient but directly supported for 
      mitotic TRAMM/TRAPPC12.
    action: ACCEPT
    reason: Accept as supported. The full-text paper shows small amounts of TRAMM on 
      chromosomes associated with ACA-positive kinetochore structures and frames this as
      a weak/transient kinetochore association.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id012
    - *id013
    - &id032
      reference_id: PMID:25918224
      supporting_text: TRAMM appears to have a weak or transient association with 
        kinetochores
    - &id026
      reference_id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
      supporting_text: the recruitment of CENPE to the kinetochores
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25918224
  qualifier: enables
  review:
    summary: Generic protein binding is not informative for TRAPPC12 function.
    action: MARK_AS_OVER_ANNOTATED
    reason: Mark as over-annotated. TRAPPC12 interactions are better represented as 
      TRAPP/TRAPPIII complex membership or as CENP-E recruitment to kinetochore, not as 
      generic protein binding.
    additional_reference_ids:
    - PMID:21525244
    - PMID:25918224
    - PMID:32296183
    supported_by:
    - *id001
    - *id002
    - *id017
    - *id018
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IDA
  original_reference_id: PMID:25918224
  qualifier: located_in
  review:
    summary: Nuclear localization is supported for the mitotic TRAMM/TRAPPC12 branch.
    action: ACCEPT
    reason: Accept as a supported location for the moonlighting mitotic role. TRAMM 
      cofractionates with a nuclear marker, associates weakly with mitotic 
      chromosomes/kinetochores, and UniProt cites nuclear localization from 
      PMID:25918224.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id011
    - *id012
    - *id013
    - *id014
- term:
    id: GO:0051310
    label: metaphase chromosome alignment
  evidence_type: IMP
  original_reference_id: PMID:25918224
  qualifier: involved_in
  review:
    summary: TRAPPC12/TRAMM is directly involved in metaphase chromosome 
      alignment/congression.
    action: ACCEPT
    reason: Accept as a core moonlighting mitotic process. TRAMM depletion causes 
      noncongressed chromosomes, mitotic arrest, and a phenotype similar to CENP-E 
      depletion.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - &id030
      reference_id: PMID:25918224
      supporting_text: Depletion of TRAMM resulted in noncongressed chromosomes
    - &id031
      reference_id: PMID:25918224
      supporting_text: arrested cells in mitosis
    - reference_id: PMID:25918224
      supporting_text: TRAMM and CENP-E may act together in chromosome congression
    - *id026
- term:
    id: GO:0090234
    label: regulation of kinetochore assembly
  evidence_type: IMP
  original_reference_id: PMID:25918224
  qualifier: involved_in
  review:
    summary: TRAPPC12/TRAMM regulates kinetochore assembly/stability during mitosis.
    action: ACCEPT
    reason: Accept as a core moonlighting mitotic process. TRAMM depletion alters 
      kinetochore protein localization and the authors identify TRAMM as a regulator of 
      kinetochore stability.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - reference_id: PMID:25918224
      supporting_text: kinetochore stability and CENP-E recruitment
    - &id027
      reference_id: PMID:25918224
      supporting_text: TRAMM affects the localization of some components of the outer 
        layer of the kinetochore
    - *id013
    - *id026
- term:
    id: GO:1905342
    label: positive regulation of protein localization to kinetochore
  evidence_type: IMP
  original_reference_id: PMID:25918224
  qualifier: involved_in
  review:
    summary: TRAPPC12/TRAMM promotes CENP-E localization to kinetochores.
    action: ACCEPT
    reason: Accept as a core moonlighting mitotic process. TRAMM depletion prevents 
      CENP-E recruitment, and phosphomimetic TRAMM recruits more CENP-E to kinetochores 
      than the nonphosphorylatable mutant.
    additional_reference_ids:
    - PMID:25918224
    - file:human/TRAPPC12/TRAPPC12-uniprot.txt
    supported_by:
    - *id017
    - *id018
    - *id027
    - *id026
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-8877475
  qualifier: located_in
  review:
    summary: Cytosol is consistent with TRAPPC12-containing TRAPP trafficking reactions.
    action: ACCEPT
    reason: Accept as supported location/context for soluble/peripheral TRAPP complex 
      biology.
    additional_reference_ids:
    - PMID:21525244
    - Reactome:R-HSA-8877475
    supported_by:
    - *id023
    - *id028
references:
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location 
    vocabulary mapping, accompanied by conservative changes to GO terms applied by 
    UniProt
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: PMID:21525244
  title: C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage
    in ER-to-Golgi trafficking.
  findings: []
- id: PMID:25918224
  title: TRAMM/TrappC12 plays a role in chromosome congression, kinetochore stability, 
    and CENP-E recruitment.
  findings: []
- id: PMID:27066478
  title: TRAPP Complexes in Secretion and Autophagy.
  findings: []
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
- id: Reactome:R-HSA-8877475
  title: TRAPPC complexes exchange GTP for GDP on RAB1
  findings: []
- id: PMID:28777934
  title: Mutations in TRAPPC12 Manifest in Progressive Childhood Encephalopathy and 
    Golgi Dysfunction.
  findings: []
- id: file:human/TRAPPC12/TRAPPC12-uniprot.txt
  title: UniProtKB record for TRAPPC12
  findings: []
core_functions:
- contributes_to_molecular_function:
    id: GO:0005085
    label: guanyl-nucleotide exchange factor activity
  in_complex:
    id: GO:1990072
    label: TRAPPIII protein complex
  description: Interphase TRAPPC12 contributes a TRAPP/TRAPPIII-associated subunit to 
    complex-level RAB1 GEF trafficking between ER, ERGIC, and Golgi. This is the 
    proteostasis-network TRAPP-component role and should be modeled as complex 
    contribution rather than independent GEF activity or COPII coat assembly.
  directly_involved_in:
  - *id010
  locations:
  - id: GO:0005829
    label: cytosol
  - id: GO:0005737
    label: cytoplasm
  - id: GO:0005793
    label: endoplasmic reticulum-Golgi intermediate compartment
  - id: GO:0005794
    label: Golgi apparatus
  - id: GO:0048471
    label: perinuclear region of cytoplasm
  supported_by:
  - *id028
  - *id029
  - *id001
  - *id002
  - *id023
  - *id008
  - *id005
  - *id006
  - *id015
  - *id007
- description: Mitotic TRAPPC12/TRAMM functions outside the interphase TRAPP pool to 
    support chromosome congression, kinetochore stability/assembly, and recruitment of 
    CENP-E to kinetochores. This is a direct moonlighting role and is not the PN 
    TRAPP-component propagation target.
  directly_involved_in:
  - id: GO:0051310
    label: metaphase chromosome alignment
  - id: GO:0090234
    label: regulation of kinetochore assembly
  - id: GO:1905342
    label: positive regulation of protein localization to kinetochore
  locations:
  - id: GO:0005634
    label: nucleus
  - id: GO:0000776
    label: kinetochore
  supported_by:
  - *id030
  - *id031
  - *id012
  - *id013
  - *id027
  - *id017
  - *id018
  - *id032
  - *id025
proposed_new_terms: []
suggested_questions:
- question: Should TRAPPC12/TRAMM be represented in GO-CAM as two separable functional 
    contexts, interphase TRAPP trafficking and mitotic kinetochore/CENP-E recruitment?
  experts:
  - GO transport editors
  - GO cell-cycle editors
  - Reactome TRAPP curators
- question: Should generic protein binding annotations for TRAPPC12-CENP-E and 
    TRAPPC12-TRAPP interactions be replaced by more informative kinetochore-localization
    and TRAPP-complex annotations?
  experts:
  - GO molecular function editors
  - GO cell-cycle editors
- question: Does direct evidence support a TRAPPC12-specific autophagy process 
    annotation, or should PN autophagy context remain limited to TRAPPIII/TRAPP complex 
    membership?
  experts:
  - GO autophagy editors
  - TRAPP/autophagy domain experts
suggested_experiments:
- description: Use synchronized cells with TRAPPC12 knockdown/rescue and phosphosite 
    mutants to measure TRAPP complex association, ER-Golgi cargo transport, Golgi 
    morphology, CENP-E kinetochore recruitment, and chromosome congression in matched 
    assays.
  experiment_type: dual trafficking and mitosis rescue assay
  hypothesis: TRAPPC12 switches between an interphase TRAPP trafficking role and a 
    mitotic kinetochore/CENP-E recruitment role controlled by phosphorylation and 
    cell-cycle state.
- description: Reconstitute TRAPPC12-containing TRAPPIII and measure RAB1 exchange plus 
    TRAPPC12 release or altered association after mitotic phosphorylation mimics.
  experiment_type: complex reconstitution and RAB1 GEF assay
  hypothesis: TRAPPC12 contributes to complex-level RAB1 GEF trafficking while 
    phosphorylation changes its TRAPP association during mitosis.
- description: Test whether TRAPPC12 depletion affects ATG9 cycling or early autophagy 
    markers independently of ER-Golgi trafficking and mitotic arrest.
  experiment_type: autophagy trafficking assay
  hypothesis: If TRAPPC12 has a direct autophagy role, autophagy-initiation defects 
    should be separable from its secretory and mitotic phenotypes.
