TXN

UniProt ID: P10599
Organism: Homo sapiens
Review Status: COMPLETE
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Gene Description

Thioredoxin-1 (Trx1) is a small (~12 kDa) ubiquitous oxidoreductase that plays a central role in cellular redox homeostasis. The protein contains the conserved active site motif CGPC (Cys32-Gly-Pro-Cys35) within a canonical thioredoxin fold, enabling it to catalyze dithiol-disulfide exchange reactions. The catalytic mechanism involves nucleophilic attack by Cys32 on substrate disulfide bonds, forming a mixed disulfide intermediate that is resolved by Cys35, releasing the reduced substrate while forming an intramolecular disulfide in Trx1. The oxidized Trx1 is regenerated by thioredoxin reductase (TrxR1) using NADPH. Major physiological substrates include peroxiredoxins (for H2O2 detoxification), ribonucleotide reductase (for deoxyribonucleotide synthesis), and oxidized protein tyrosine phosphatases. Beyond its catalytic function, Trx1 regulates transcription factors including AP-1 and NF-kB via interaction with APE1/Ref-1, and modulates apoptosis by binding ASK1 in its reduced state. Trx1 also serves as a nitrosothiol carrier, with Cys73 capable of S-nitrosylation and transnitrosation of target proteins like caspase-3. The protein is predominantly cytosolic but translocates to the nucleus upon cellular stress, and is also secreted via a leaderless pathway where it exhibits cytokine-like properties and can modulate cell surface receptors like CD30.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005576 extracellular region
IEA
GO_REF:0000044
ACCEPT
Summary: IEA annotation based on UniProt subcellular location. Thioredoxin is secreted via a leaderless secretory pathway and has documented extracellular functions [PMID:1332947].
Reason: This annotation is well-supported by experimental evidence showing Trx1 secretion. PMID:1332947 demonstrated that thioredoxin is actively secreted by various cell types through a non-classical secretory pathway.
Supporting Evidence:
PMID:1332947
Thioredoxin, despite its function as an intracellular disulfide reducing enzyme and its lack of a signal sequence, has been found to play some roles extracellularly. Here we show that thioredoxin is actively secreted by a variety of normal and transformed cells
file:human/TXN/TXN-deep-research-falcon.md
See deep research file for comprehensive analysis
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: IEA annotation supported by experimental evidence showing nuclear translocation of Trx1 in response to cellular stress [PMID:9108029, PMID:11118054].
Reason: Nuclear localization is well-established. Trx1 translocates to the nucleus where it interacts with Ref-1/APE1 to regulate AP-1 transcription factor activity.
Supporting Evidence:
PMID:9108029
Phorbol 12-myristate 13 acetate efficiently translocated TRX into the HeLa cell nucleus where Ref-1 preexists.
PMID:11118054
After exposure to IR, nuclear levels of immunoreactive TRX increased, accompanied by an increase in AP-1 DNA binding activity.
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: IEA annotation consistent with Trx1 being predominantly cytoplasmic [PMID:9108029, PMID:11118054].
Reason: Cytoplasmic localization is the primary location for Trx1 in unstressed cells, where it performs its major redox functions.
Supporting Evidence:
PMID:11118054
Thioredoxin (TRX) is a cytoplasmic, redox-sensitive signaling factor believed to participate in the regulation of nuclear transcription factors mediating cellular responses to environmental stress.
GO:0006351 DNA-templated transcription
IEA
GO_REF:0000043
MODIFY
Summary: IEA annotation based on UniProt keyword mapping. Trx1 does not directly participate in transcription but regulates transcription factor DNA-binding activity.
Reason: This term is too direct - Trx1 does not function as a transcription factor or directly in the transcription machinery. Instead, it regulates transcription factor activity through redox mechanisms. A more appropriate term would be GO:0043388 (positive regulation of DNA binding) or GO:0006357 (regulation of transcription by RNA polymerase II).
GO:0015035 protein-disulfide reductase activity
IEA
GO_REF:0000120
ACCEPT
Summary: IEA annotation for the core molecular function of thioredoxin. This is the primary enzymatic activity of Trx1.
Reason: This is the defining enzymatic activity of thioredoxin - reducing disulfide bonds in target proteins via its CGPC active site. Well-established by multiple experimental studies.
Supporting Evidence:
PMID:2176490
HTR was as efficient as E. coli or plant and algal thioredoxins when assayed with E. coli ribonucleotide reductase or for the reduction of insulin.
GO:0019725 cellular homeostasis
IEA
GO_REF:0000117
MODIFY
Summary: IEA annotation that is overly general. Trx1 specifically maintains cellular redox homeostasis.
Reason: While Trx1 does contribute to cellular homeostasis, the more specific and accurate term is GO:0045454 (cell redox homeostasis), which precisely describes the function of the thioredoxin system.
Proposed replacements: cell redox homeostasis
GO:0005515 protein binding
IPI
PMID:10814541
A possible interaction of thioredoxin with VDUP1 in HeLa cel...
MODIFY
Summary: This study identified VDUP1/TXNIP as a thioredoxin-binding protein using yeast two-hybrid screening in HeLa cells [PMID:10814541].
Reason: The generic protein binding term should be replaced with a more specific term. TXNIP is a physiologically important negative regulator of Trx1 that binds through the redox-active site cysteines.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:10814541
Loss of interaction between VDUP1 and hTrx was observed either when two cysteines (Cys 32 and 35) in hTrx were substituted by serines
GO:0005515 protein binding
IPI
PMID:15480426
Thioredoxin modulates activator protein 1 (AP-1) activity an...
ACCEPT
Summary: This study demonstrated direct interaction between Trx and Jab1 (COPS5), showing that Trx negatively regulates Jab1-controlled signaling pathways [PMID:15480426].
Reason: While protein binding is generic, this represents a specific functional interaction where Trx modulates AP-1 activity and p27Kip1 degradation through Jab1 binding. The interaction is validated by FRET and co-immunoprecipitation.
Supporting Evidence:
PMID:15480426
Fluorescence resonance energy transfer and co-immunoprecipitation studies revealed that Trx and Jab1 colocalize and directly interact with each other.
GO:0005515 protein binding
IPI
PMID:15657067
Phosphotyrosine signaling networks in epidermal growth facto...
KEEP AS NON CORE
Summary: High-throughput proteomics study identifying TXN in phosphotyrosine signaling networks.
Reason: This is from a large-scale proteomics study without specific mechanistic validation for Trx1. The interaction may be indirect or represent a broader signaling network context rather than a direct functional interaction.
Supporting Evidence:
PMID:15657067
Epub 2005 Jan 17. Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells.
GO:0005515 protein binding
IPI
PMID:17353931
Large-scale mapping of human protein-protein interactions by...
KEEP AS NON CORE
Summary: Large-scale protein-protein interaction mapping study by mass spectrometry.
Reason: High-throughput study without specific mechanistic validation. Protein binding is too generic for annotation purposes without functional context.
Supporting Evidence:
PMID:17353931
Large-scale mapping of human protein-protein interactions by mass spectrometry.
GO:0005515 protein binding
IPI
PMID:17557078
Selective redox regulation of cytokine receptor signaling by...
ACCEPT
Summary: This study identified CD30 (TNFRSF8) as a specific extracellular target of Trx1 through kinetic trapping and demonstrated functional regulation of CD30 signaling [PMID:17557078].
Reason: This represents a well-characterized, specific protein-protein interaction with functional consequences. Trx1 catalytically interacts with CD30 on the cell surface to regulate receptor-ligand interactions.
Supporting Evidence:
PMID:17557078
Using a mechanism-based kinetic trapping technique to identify disulfide exchange interactions on the intact surface of living lymphocytes, we found that Trx1 catalytically interacts with a single principal target protein. This target protein was identified as the tumor necrosis factor receptor superfamily member 8 (TNFRSF8/CD30).
GO:0005515 protein binding
IPI
PMID:17606900
Thioredoxin is required for S-nitrosation of procaspase-3 an...
MODIFY
Summary: This study demonstrated specific transnitrosation between Trx1 and procaspase-3, showing Trx participation in anti-apoptotic signaling [PMID:17606900].
Reason: This represents a specific functional interaction where Trx1 transfers nitrosyl groups to caspase-3, inhibiting apoptosis. A more specific term describing this regulatory interaction would be appropriate.
Supporting Evidence:
PMID:17606900
Here we show that a specific transnitrosation reaction between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T cells and prevents apoptosis.
GO:0005515 protein binding
IPI
PMID:19690162
Salmonella type III secretion effector SlrP is an E3 ubiquit...
ACCEPT
Summary: This study identified Trx1 as a target of Salmonella effector SlrP, which acts as an E3 ubiquitin ligase for thioredoxin [PMID:19690162].
Reason: While this represents a pathogen-host interaction rather than normal physiology, the interaction is specific and has been validated by multiple methods including coimmunoprecipitation.
Supporting Evidence:
PMID:19690162
Using a genetic screen, we identified the small, reduction/oxidation-regulatory protein thioredoxin as a mammalian binding partner of the Salmonella effector SlrP. The interaction was confirmed by affinity chromatography and coimmunoprecipitation.
GO:0005515 protein binding
IPI
PMID:19805025
CIB1 functions as a Ca(2+)-sensitive modulator of stress-ind...
KEEP AS NON CORE
Summary: This study focused on CIB1-ASK1 interaction rather than direct Trx-protein binding.
Reason: The paper's main focus is on CIB1 as a modulator of ASK1 signaling. While Trx1 is mentioned in the context of ASK1 regulation, the specific protein binding evidence for Trx1 is indirect in this study.
Supporting Evidence:
PMID:19805025
CIB1 functions as a Ca(2+)-sensitive modulator of stress-induced signaling by targeting ASK1.
GO:0005515 protein binding
IPI
PMID:20029029
Regulation of epidermal growth factor receptor trafficking b...
UNDECIDED
Summary: Study on HDAC6 regulation of EGFR trafficking.
Reason: Unable to verify the specific Trx1 protein binding context in this study without access to the full publication.
Supporting Evidence:
PMID:20029029
Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6.
GO:0005515 protein binding
IPI
PMID:21145461
Dynamics of cullin-RING ubiquitin ligase network revealed by...
KEEP AS NON CORE
Summary: Large-scale quantitative proteomics study on cullin-RING ubiquitin ligase networks [PMID:21145461].
Reason: This is a high-throughput proteomics study focused on CRL network dynamics. Any Trx1 interactions identified would be incidental to the main focus and lack specific mechanistic validation.
Supporting Evidence:
PMID:21145461
Here, we report the development of a quantitative proteomics platform centered on multiplex absolute quantification (AQUA) technology to elucidate the architecture of the cullin-RING ubiquitin ligase (CRL) network
GO:0005515 protein binding
IPI
PMID:21771788
Positive regulation of apoptosis signal-regulating kinase 1 ...
ACCEPT
Summary: This study focuses on ZPR9 as a positive regulator of ASK1 and mentions Trx as a negative regulator that competes with ZPR9 [PMID:21771788].
Reason: The study validates the Trx-ASK1 interaction in the context of understanding ASK1 regulation, showing that ZPR9 destabilizes the Trx-ASK1 complex.
Supporting Evidence:
PMID:21771788
Ectopic expression of wild-type ZPR9, but not an S314A/T318A mutant, stimulated ASK1 kinase activity and positively regulated ASK1-mediated signaling to both JNK and p38 kinases by destabilizing complex formation between ASK1 and its negative regulators, Trx and 14-3-3
GO:0005515 protein binding
IPI
PMID:21988832
Toward an understanding of the protein interaction network o...
KEEP AS NON CORE
Summary: Protein interaction network study of human liver.
Reason: High-throughput interactome study without specific mechanistic validation for Trx1 interactions.
Supporting Evidence:
PMID:21988832
Toward an understanding of the protein interaction network of the human liver.
GO:0005515 protein binding
IPI
PMID:24658140
The mammalian-membrane two-hybrid assay (MaMTH) for probing ...
UNDECIDED
Summary: Mammalian membrane two-hybrid assay study.
Reason: Unable to verify the specific Trx1 interaction context without access to the full publication.
Supporting Evidence:
PMID:24658140
The mammalian-membrane two-hybrid assay (MaMTH) for probing membrane-protein interactions in human cells.
GO:0005515 protein binding
IPI
PMID:24976139
Reactivation of oxidized PTP1B and PTEN by thioredoxin 1
ACCEPT
Summary: This study demonstrated that Trx1 reactivates oxidized PTP1B and PTEN phosphatases through direct thiol-disulfide exchange [PMID:24976139].
Reason: This represents a mechanistically validated interaction where Trx1 reduces oxidized phosphatases, returning them to their active state. The interaction was confirmed by kinetic trapping.
Supporting Evidence:
PMID:24976139
Finally, using a mechanism-based trapping approach, we demonstrate direct thiol disulphide exchange between the active sites of thioredoxin and either phosphatase.
GO:0005515 protein binding
IPI
PMID:25402766
Peroxiredoxin-2 and STAT3 form a redox relay for H2O2 signal...
ACCEPT
Summary: This study describes a Prx2-STAT3 redox relay but validates that Trx1 is the physiological reductant of Prx2 [PMID:25402766].
Reason: The study confirms the Trx1-Prx2 interaction as part of the cellular redox signaling system. Prx2 is a well-established Trx1 substrate.
Supporting Evidence:
PMID:25402766
Prx2 forms a redox relay with the transcription factor STAT3 in which oxidative equivalents flow from Prx2 to STAT3.
GO:0005515 protein binding
IPI
PMID:28514442
Architecture of the human interactome defines protein commun...
KEEP AS NON CORE
Summary: Large-scale human interactome mapping study.
Reason: High-throughput interactome study. Protein binding annotations from such studies require additional validation for functional significance.
Supporting Evidence:
PMID:28514442
Architecture of the human interactome defines protein communities and disease networks.
GO:0005515 protein binding
IPI
PMID:31980649
Extensive rewiring of the EGFR network in colorectal cancer ...
UNDECIDED
Summary: Study on EGFR network rewiring in colorectal cancer cells.
Reason: Unable to verify the specific Trx1 protein binding context without access to the full publication.
Supporting Evidence:
PMID:31980649
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS(G13D).
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
KEEP AS NON CORE
Summary: Reference map of human binary protein interactome.
Reason: High-throughput binary interactome study. Requires additional validation for specific Trx1 interactions.
Supporting Evidence:
PMID:32296183
Apr 8. A reference map of the human binary protein interactome.
GO:0005515 protein binding
IPI
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative ...
UNDECIDED
Summary: Interactome mapping study on neurodegenerative disease proteins.
Reason: Unable to verify the specific Trx1 interaction context without access to the full publication.
Supporting Evidence:
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
GO:0005654 nucleoplasm
IDA
GO_REF:0000052
ACCEPT
Summary: IDA annotation based on immunofluorescence data showing nucleoplasm localization.
Reason: Consistent with nuclear translocation of Trx1 upon cellular stress as demonstrated in multiple studies [PMID:9108029, PMID:11118054].
GO:0005829 cytosol
IDA
GO_REF:0000052
ACCEPT
Summary: IDA annotation based on immunofluorescence data showing cytosolic localization.
Reason: The cytosol is the primary location for Trx1 in unstressed cells, consistent with its function in maintaining cytosolic protein redox state.
GO:0004791 thioredoxin-disulfide reductase (NADPH) activity
TAS
Reactome:R-NUL-9617742
REMOVE
Summary: Reactome annotation. Note that this GO term describes the activity of thioredoxin reductase, not thioredoxin itself.
Reason: This is incorrect - GO:0004791 describes the activity of thioredoxin reductase (TrxR), which reduces oxidized thioredoxin using NADPH. Thioredoxin itself does not have this activity; it is the substrate of this reaction, not the enzyme. The correct term for thioredoxin is GO:0015035 (protein-disulfide reductase activity).
GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
IMP
PMID:22492997
DJ-1 induces thioredoxin 1 expression through the Nrf2 pathw...
ACCEPT
Summary: This study shows that DJ-1 induces Trx1 expression through Nrf2, and Trx1 is required for DJ-1-dependent AKT activation in response to H2O2 [PMID:22492997].
Reason: The study demonstrates that Trx1 knockdown abrogates DJ-1-dependent, H2O2-induced AKT activation, supporting a role in PI3K/AKT signaling regulation.
Supporting Evidence:
PMID:22492997
Additionally, knockdown of Trx1 significantly abrogates DJ-1-dependent, hydrogen peroxide-induced activation of the pro-survival factor AKT.
GO:0061692 cellular detoxification of hydrogen peroxide
IGI
PMID:22492997
DJ-1 induces thioredoxin 1 expression through the Nrf2 pathw...
ACCEPT
Summary: The study shows that Trx1 is induced by DJ-1 and provides cytoprotection against H2O2 [PMID:22492997].
Reason: Trx1 functions in H2O2 detoxification by reducing peroxiredoxins, which directly detoxify H2O2. This is a core function of the thioredoxin system.
Supporting Evidence:
PMID:22492997
Further, Nrf2 knockdown abolishes DJ-1-mediated Trx1 induction and cytoprotection against hydrogen peroxide
GO:0005654 nucleoplasm
TAS
Reactome:R-NUL-9617742
ACCEPT
Summary: Reactome TAS annotation for nucleoplasm localization.
Reason: Consistent with documented nuclear translocation of Trx1.
GO:0005829 cytosol
TAS
Reactome:R-HSA-111751
ACCEPT
Summary: Reactome annotation for Trx1 participation in ribonucleotide reductase reaction.
Reason: Trx1 is a well-established electron donor for ribonucleotide reductase in the cytosol, supporting deoxyribonucleotide synthesis.
GO:0005829 cytosol
TAS
Reactome:R-HSA-111804
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with primary cytosolic localization of Trx1.
GO:0005829 cytosol
TAS
Reactome:R-HSA-1250280
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic function of Trx1.
GO:0005829 cytosol
TAS
Reactome:R-HSA-3225851
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-3341343
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-3697882
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-5676917
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-5676940
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005829 cytosol
TAS
Reactome:R-HSA-73646
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005515 protein binding
IPI
PMID:15246877
S-nitrosation of thioredoxin in the nitrogen monoxide/supero...
ACCEPT
Summary: This study demonstrates that S-nitrosation of Trx leads to dissociation from ASK1, activating the kinase [PMID:15246877].
Reason: The study validates the functional Trx-ASK1 interaction and shows that redox modification of Trx regulates ASK1 activity.
Supporting Evidence:
PMID:15246877
N2O3-dependent S-nitrosation of Trx at approximately 2-fold of NO excess compared to the superoxide amount resulted in dissociation and activation of apoptosis signal regulating kinase 1 (ASK1).
GO:0005515 protein binding
IPI
PMID:17260951
Buried S-nitrosocysteine revealed in crystal structures of h...
ACCEPT
Summary: Crystal structure study of S-nitrosylated human thioredoxin showing homodimer formation [PMID:17260951].
Reason: The study provides structural evidence for Trx1 homodimerization and S-nitrosylation at Cys62 and Cys69, important for understanding Trx1 regulation.
Supporting Evidence:
PMID:17260951
S-Nitroso modifications of cysteines 62 and 69 are clearly visible in the structure and display planar cis geometries, whereas cysteines 32, 35, and 73 form intra- and intermolecular disulfide bonds.
GO:0005515 protein binding
IPI
PMID:9108029
AP-1 transcriptional activity is regulated by a direct assoc...
ACCEPT
Summary: Foundational study demonstrating direct association between Trx and Ref-1/APE1 to regulate AP-1 transcriptional activity [PMID:9108029].
Reason: This is a key study establishing the Trx-Ref-1 interaction and its role in redox regulation of transcription factors. The interaction requires the Trx catalytic cysteines.
Supporting Evidence:
PMID:9108029
To prove the direct active site-mediated association between TRX and Ref-1, we generated a series of substitution-mutant cysteine residues of TRX. In both an in vitro diamide-induced cross-linking study and an in vivo mammalian two-hybrid assay we proved that TRX can associate directly with Ref-1 in the nucleus
GO:0005576 extracellular region
IDA
PMID:1332947
Secretion of thioredoxin by normal and neoplastic cells thro...
ACCEPT
Summary: Key study demonstrating secretion of thioredoxin through a leaderless pathway [PMID:1332947].
Reason: This study established that Trx1 is secreted by various cell types through a non-classical secretory pathway, independent of the ER-Golgi route.
Supporting Evidence:
PMID:1332947
thioredoxin is actively secreted by a variety of normal and transformed cells, including fibroblasts, airway epithelial cells, and activated B and T lymphocytes. Neither brefeldin A nor dinitrophenol, two drugs that block transport through the exocytic pathway, inhibit secretion of thioredoxin
GO:0005634 nucleus
IDA
PMID:9108029
AP-1 transcriptional activity is regulated by a direct assoc...
ACCEPT
Summary: Study demonstrating nuclear translocation of Trx in response to PMA treatment [PMID:9108029].
Reason: The study clearly shows Trx translocation to the nucleus where it interacts with Ref-1 to regulate AP-1 activity.
Supporting Evidence:
PMID:9108029
Phorbol 12-myristate 13 acetate efficiently translocated TRX into the HeLa cell nucleus where Ref-1 preexists.
GO:0005737 cytoplasm
IDA
PMID:9108029
AP-1 transcriptional activity is regulated by a direct assoc...
ACCEPT
Summary: Study confirming cytoplasmic localization of Trx in unstimulated cells [PMID:9108029].
Reason: The cytoplasm is the primary location for Trx1 before nuclear translocation upon stimulation.
Supporting Evidence:
PMID:9108029
AP-1 transcriptional activity is regulated by a direct association between thioredoxin and Ref-1.
GO:0009314 response to radiation
IDA
PMID:9108029
AP-1 transcriptional activity is regulated by a direct assoc...
KEEP AS NON CORE
Summary: While the study discusses Trx function, the primary radiation response data is in PMID:11118054.
Reason: The study mentions radiation context but is primarily focused on PMA-induced nuclear translocation. The radiation response is better documented in PMID:11118054.
Supporting Evidence:
PMID:9108029
AP-1 transcriptional activity is regulated by a direct association between thioredoxin and Ref-1.
GO:0015035 protein-disulfide reductase activity
IDA
PMID:17182577
Cross-reactivity and 1.4-A crystal structure of Malassezia s...
ACCEPT
Summary: This study primarily focuses on thioredoxin as an allergen and cross-reactivity between fungal and human thioredoxins [PMID:17182577].
Reason: Although focused on allergenic properties, the study confirms the disulfide reductase activity is conserved across thioredoxins from different species.
Supporting Evidence:
PMID:17182577
We have identified thioredoxins (Trx) of Malassezia sympodialis, a yeast involved in the pathogenesis of atopic eczema, and of Aspergillus fumigatus, a fungus involved in pulmonary complications, as novel IgE-binding proteins. We show that these Trx, including the human enzyme, represent cross-reactive structures
GO:0015035 protein-disulfide reductase activity
IDA
PMID:19032234
Auto- and cross-reactivity to thioredoxin allergens in aller...
ACCEPT
Summary: Study on thioredoxin allergenicity in allergic bronchopulmonary aspergillosis [PMID:19032234].
Reason: The study confirms functional conservation of thioredoxin activity across species.
Supporting Evidence:
PMID:19032234
All thioredoxins, including the human enzyme, bind IgE from patients with allergic bronchopulmonary aspergillosis and induce allergen-specific proliferation
GO:0015035 protein-disulfide reductase activity
IDA
PMID:2176490
Human thioredoxin reactivity-structure/function relationship
ACCEPT
Summary: Foundational study characterizing human thioredoxin reactivity and structure-function relationships [PMID:2176490].
Reason: This is a key study demonstrating the protein-disulfide reductase activity of human thioredoxin using ribonucleotide reductase and insulin reduction assays.
Supporting Evidence:
PMID:2176490
HTR was as efficient as E. coli or plant and algal thioredoxins when assayed with E. coli ribonucleotide reductase or for the reduction of insulin.
GO:0042803 protein homodimerization activity
IDA
PMID:17260951
Buried S-nitrosocysteine revealed in crystal structures of h...
ACCEPT
Summary: Crystal structure study revealing disulfide-linked homodimer formation in human thioredoxin [PMID:17260951].
Reason: The study provides high-resolution structural evidence for Trx1 homodimerization through Cys73 disulfide bond.
Supporting Evidence:
PMID:17260951
cysteines 32, 35, and 73 form intra- and intermolecular disulfide bonds
GO:0042803 protein homodimerization activity
IDA
PMID:9369469
Human thioredoxin homodimers: regulation by pH, role of aspa...
ACCEPT
Summary: Detailed biochemical and structural study of human thioredoxin homodimerization and its pH regulation [PMID:9369469].
Reason: The study provides comprehensive biochemical characterization of Trx1 dimerization, including pH dependence and the role of Asp60.
Supporting Evidence:
PMID:9369469
A recent crystal structure determination of human thioredoxin revealed an inactive dimeric form of the protein covalently linked through a disulfide bond involving Cys 73 from each monomer
GO:0045454 cell redox homeostasis
IDA
PMID:2176490
Human thioredoxin reactivity-structure/function relationship
ACCEPT
Summary: Foundational study establishing human thioredoxin function in redox reactions [PMID:2176490].
Reason: This is a core function of thioredoxin - maintaining cellular redox homeostasis through its disulfide reductase activity.
Supporting Evidence:
PMID:2176490
The reactivity of human thioredoxin (HTR) was tested in several reactions. HTR was as efficient as E. coli or plant and algal thioredoxins when assayed with E. coli ribonucleotide reductase or for the reduction of insulin.
GO:0045454 cell redox homeostasis
IMP
PMID:9108029
AP-1 transcriptional activity is regulated by a direct assoc...
ACCEPT
Summary: Study demonstrating Trx function in redox regulation of transcription factor activity [PMID:9108029].
Reason: The study demonstrates that Trx redox status is critical for its function in regulating AP-1 activity, supporting its role in cellular redox homeostasis.
Supporting Evidence:
PMID:9108029
Thioredoxin (TRX) is a pleiotropic cellular factor that has thiol-mediated redox activity and is important in regulation of cellular processes
GO:0047134 protein-disulfide reductase [NAD(P)H] activity
IDA
PMID:17182577
Cross-reactivity and 1.4-A crystal structure of Malassezia s...
REMOVE
Summary: Study on thioredoxin allergenicity that confirms enzymatic activity.
Reason: This GO term describes an enzyme that directly uses NAD(P)H to reduce protein disulfides. However, Trx1 itself does not directly use NADPH - it is reduced by thioredoxin reductase which uses NADPH. The correct term is GO:0015035 (protein-disulfide reductase activity), which does not specify the electron donor.
Supporting Evidence:
PMID:17182577
Cross-reactivity and 1.4-A crystal structure of Malassezia sympodialis thioredoxin (Mala s 13), a member of a new pan-allergen family.
GO:0071731 response to nitric oxide
IMP
PMID:16408020
Thioredoxin catalyzes the S-nitrosation of the caspase-3 act...
ACCEPT
Summary: This study demonstrates that Trx1 catalyzes S-nitrosation of caspase-3 in response to NO [PMID:16408020].
Reason: Trx1 responds to NO by becoming S-nitrosylated at Cys73 and subsequently transferring the nitrosyl group to caspase-3, representing a specific cellular response to NO.
Supporting Evidence:
PMID:16408020
We demonstrated that a single cysteine in thioredoxin (Trx) is capable of a targeted, reversible transnitrosation reaction with Cys163 of Casp-3.
GO:0071731 response to nitric oxide
IMP
PMID:17606900
Thioredoxin is required for S-nitrosation of procaspase-3 an...
ACCEPT
Summary: Study demonstrating Trx requirement for S-nitrosation of procaspase-3 and inhibition of apoptosis [PMID:17606900].
Reason: Confirms that Trx1 is essential for NO-mediated S-nitrosation of caspase-3 and consequent anti-apoptotic signaling.
Supporting Evidence:
PMID:17606900
Here we show that a specific transnitrosation reaction between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T cells and prevents apoptosis.
GO:0070062 extracellular exosome
HDA
PMID:23533145
In-depth proteomic analyses of exosomes isolated from expres...
KEEP AS NON CORE
Summary: High-throughput proteomics study of exosomes from prostatic secretions.
Reason: High-throughput proteomic identification of Trx1 in exosomes. While consistent with extracellular localization, this is likely a secondary observation rather than a core function.
Supporting Evidence:
PMID:23533145
2013 Apr 23. In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
GO:0003723 RNA binding
HDA
PMID:22658674
Insights into RNA biology from an atlas of mammalian mRNA-bi...
MARK AS OVER ANNOTATED
Summary: High-throughput RNA interactome capture study.
Reason: RNA binding is not a characterized function of thioredoxin. This may represent indirect association or false positive from high-throughput screening. Trx1 is not known to have specific RNA binding activity.
Supporting Evidence:
PMID:22658674
May 31. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
GO:0003723 RNA binding
HDA
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on ...
MARK AS OVER ANNOTATED
Summary: mRNA-bound proteome study.
Reason: Same as above - RNA binding is not a characterized function of thioredoxin and likely represents high-throughput screen artifact.
Supporting Evidence:
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
GO:0070062 extracellular exosome
HDA
PMID:19056867
Large-scale proteomics and phosphoproteomics of urinary exos...
KEEP AS NON CORE
Summary: Proteomics study of urinary exosomes.
Reason: Consistent with Trx1 secretion, but exosomal localization is not a core function.
Supporting Evidence:
PMID:19056867
2008 Dec 3. Large-scale proteomics and phosphoproteomics of urinary exosomes.
GO:0070062 extracellular exosome
HDA
PMID:20458337
MHC class II-associated proteins in B-cell exosomes and pote...
KEEP AS NON CORE
Summary: Study of MHC class II-associated proteins in B-cell exosomes.
Reason: Consistent with extracellular presence of Trx1 but not a core function.
Supporting Evidence:
PMID:20458337
2010 May 11. MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis.
GO:0005829 cytosol
TAS
Reactome:R-HSA-1250264
ACCEPT
Summary: Reactome annotation for TXNIP binding to reduced thioredoxin in cytosol.
Reason: The TXNIP-Trx1 interaction occurs in the cytosol and is well-established.
GO:0005829 cytosol
TAS
Reactome:R-HSA-9796045
ACCEPT
Summary: Reactome annotation for cytosolic localization.
Reason: Consistent with cytosolic localization.
GO:0005515 protein binding
IPI
PMID:11118054
Thioredoxin nuclear translocation and interaction with redox...
ACCEPT
Summary: Study demonstrating Trx interaction with Ref-1 in the nucleus following ionizing radiation [PMID:11118054].
Reason: The study validates the Trx-Ref-1 interaction and shows it occurs in the nucleus after radiation exposure.
Supporting Evidence:
PMID:11118054
It was shown that a physical interaction between Ref-1 and TRX occurs within the nucleus and is enhanced after exposure to IR.
GO:0009314 response to radiation
IDA
PMID:11118054
Thioredoxin nuclear translocation and interaction with redox...
ACCEPT
Summary: Study demonstrating Trx nuclear translocation and AP-1 activation in response to ionizing radiation [PMID:11118054].
Reason: The study clearly demonstrates that Trx responds to ionizing radiation by translocating to the nucleus and activating AP-1.
Supporting Evidence:
PMID:11118054
After exposure to IR, nuclear levels of immunoreactive TRX increased, accompanied by an increase in AP-1 DNA binding activity.
GO:0043388 positive regulation of DNA binding
IDA
PMID:11118054
Thioredoxin nuclear translocation and interaction with redox...
ACCEPT
Summary: Study demonstrating that Trx from irradiated cells activates AP-1 DNA binding activity [PMID:11118054].
Reason: The study directly demonstrates that Trx positively regulates AP-1 DNA binding activity through its redox function.
Supporting Evidence:
PMID:11118054
Furthermore, TRX immunoprecipitated from irradiated cells was capable of activating AP-1 DNA binding activity in nonirradiated nuclear extracts.
GO:0043066 negative regulation of apoptotic process
NAS NEW
Summary: Added to align core_functions with existing annotations.
Reason: Core function term not present in existing_annotations.
Supporting Evidence:
PMID:16408020
We demonstrated that a single cysteine in thioredoxin (Trx) is capable of a targeted, reversible transnitrosation reaction with Cys163 of Casp-3.
PMID:17606900
Here we show that a specific transnitrosation reaction between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T cells and prevents apoptosis.

Core Functions

Trx1 reduces disulfide bonds in target proteins via dithiol-disulfide exchange using the CGPC active site. Demonstrated with ribonucleotide reductase, insulin, peroxiredoxins, and phosphatases.

Directly Involved In:
Cellular Locations:
Supporting Evidence:
  • PMID:2176490
    HTR was as efficient as E. coli or plant and algal thioredoxins when assayed with E. coli ribonucleotide reductase or for the reduction of insulin.
  • PMID:24976139
    Finally, using a mechanism-based trapping approach, we demonstrate direct thiol disulphide exchange between the active sites of thioredoxin and either phosphatase.

Trx1 regulates DNA-binding activity of transcription factors AP-1 and NF-kB through interaction with APE1/Ref-1. Nuclear translocation of Trx and interaction with Ref-1 potentiates AP-1 DNA binding in response to stress signals.

Cellular Locations:
Supporting Evidence:
  • PMID:9108029
    To prove the direct active site-mediated association between TRX and Ref-1, we generated a series of substitution-mutant cysteine residues of TRX. In both an in vitro diamide-induced cross-linking study and an in vivo mammalian two-hybrid assay we proved that TRX can associate directly with Ref-1 in the nucleus
  • PMID:11118054
    Furthermore, TRX immunoprecipitated from irradiated cells was capable of activating AP-1 DNA binding activity in nonirradiated nuclear extracts.

Trx1 responds to NO by becoming S-nitrosylated at Cys73 and mediating transnitrosation of target proteins including caspase-3, resulting in anti-apoptotic signaling.

Supporting Evidence:
  • PMID:16408020
    We demonstrated that a single cysteine in thioredoxin (Trx) is capable of a targeted, reversible transnitrosation reaction with Cys163 of Casp-3.
  • PMID:17606900
    Here we show that a specific transnitrosation reaction between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T cells and prevents apoptosis.

References

Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping
Gene Ontology annotation based on curation of immunofluorescence data
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
A possible interaction of thioredoxin with VDUP1 in HeLa cells detected in a yeast two-hybrid system
  • VDUP1/TXNIP identified as thioredoxin-binding protein
  • Interaction requires Cys32 and Cys35 of Trx
Thioredoxin nuclear translocation and interaction with redox factor-1 activates the activator protein-1 transcription factor in response to ionizing radiation.
  • Trx translocates to nucleus after IR exposure
  • Trx-Ref-1 interaction enhanced after radiation
  • Trx activates AP-1 DNA binding activity
Secretion of thioredoxin by normal and neoplastic cells through a leaderless secretory pathway
  • Trx secreted by various cell types
  • Secretion is independent of ER-Golgi pathway
S-nitrosation of thioredoxin in the nitrogen monoxide/superoxide system activates apoptosis signal-regulating kinase 1.
  • S-nitrosation of Trx leads to ASK1 dissociation and activation
Thioredoxin modulates activator protein 1 (AP-1) activity and p27Kip1 degradation through direct interaction with Jab1.
  • Trx directly interacts with Jab1
  • Negatively regulates Jab1-controlled signaling
Thioredoxin catalyzes the S-nitrosation of the caspase-3 active site cysteine
  • Trx catalyzes transnitrosation of caspase-3
  • Cys73 of Trx involved in nitrosyl transfer
Cross-reactivity and 1.4-A crystal structure of Malassezia sympodialis thioredoxin (Mala s 13), a member of a new pan-allergen family.
  • Human Trx is a cross-reactive allergen
  • Conserved thioredoxin fold structure
Buried S-nitrosocysteine revealed in crystal structures of human thioredoxin
  • Crystal structure of S-nitrosylated Trx1
  • S-nitrosylation at Cys62 and Cys69
  • Homodimer formation through Cys73
Selective redox regulation of cytokine receptor signaling by extracellular thioredoxin-1
  • CD30 identified as specific extracellular target of Trx1
  • Trx1 modulates CD30 ligand binding and signaling
Thioredoxin is required for S-nitrosation of procaspase-3 and the inhibition of apoptosis in Jurkat cells.
  • Trx mediates transnitrosation of procaspase-3
  • Prevents apoptosis in T cells
Auto- and cross-reactivity to thioredoxin allergens in allergic bronchopulmonary aspergillosis
  • Human Trx binds IgE from ABPA patients
  • Cross-reactivity with fungal thioredoxins
Salmonella type III secretion effector SlrP is an E3 ubiquitin ligase for mammalian thioredoxin
  • SlrP ubiquitinates Trx
  • Leads to decreased Trx activity
Human thioredoxin reactivity-structure/function relationship
  • Trx reduces ribonucleotide reductase efficiently
  • Reduces insulin as other thioredoxins
Positive regulation of apoptosis signal-regulating kinase 1 signaling by ZPR9 protein, a zinc finger protein.
  • ZPR9 destabilizes Trx-ASK1 complex
  • Confirms Trx as negative regulator of ASK1
DJ-1 induces thioredoxin 1 expression through the Nrf2 pathway
  • Trx1 expression induced by DJ-1 via Nrf2
  • Trx1 required for H2O2-induced AKT activation
Reactivation of oxidized PTP1B and PTEN by thioredoxin 1
  • Trx1 reactivates oxidized phosphatases
  • Direct thiol-disulfide exchange demonstrated
Peroxiredoxin-2 and STAT3 form a redox relay for H2O2 signaling
  • Confirms Trx1 as reductant of Prx2
AP-1 transcriptional activity is regulated by a direct association between thioredoxin and Ref-1.
  • Trx directly associates with Ref-1/APE1
  • Requires Trx catalytic cysteines
  • Nuclear translocation upon PMA treatment
Human thioredoxin homodimers: regulation by pH, role of aspartate 60, and crystal structure of the aspartate 60 --> asparagine mutant.
  • Trx forms homodimers through Cys73
  • pH-dependent dimerization
  • Asp60 regulates dimerization
Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells.
Large-scale mapping of human protein-protein interactions by mass spectrometry.
CIB1 functions as a Ca(2+)-sensitive modulator of stress-induced signaling by targeting ASK1.
Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6.
Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.
Toward an understanding of the protein interaction network of the human liver.
The mammalian-membrane two-hybrid assay (MaMTH) for probing membrane-protein interactions in human cells.
Architecture of the human interactome defines protein communities and disease networks.
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS(G13D).
A reference map of the human binary protein interactome.
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Large-scale proteomics and phosphoproteomics of urinary exosomes.
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis.
Reactome:R-NUL-9617742
Reactome pathway annotation
Reactome:R-HSA-111751
Reactome pathway - Ribonucleotide reductase reaction
Reactome:R-HSA-111804
Reactome pathway annotation
Reactome:R-HSA-1250280
Reactome pathway annotation
Reactome:R-HSA-3225851
Reactome pathway annotation
Reactome:R-HSA-3341343
Reactome pathway annotation
Reactome:R-HSA-3697882
Reactome pathway annotation
Reactome:R-HSA-5676917
Reactome pathway annotation
Reactome:R-HSA-5676940
Reactome pathway annotation
Reactome:R-HSA-73646
Reactome pathway annotation
Reactome:R-HSA-1250264
Reactome pathway - TXNIP binding to reduced thioredoxin
Reactome:R-HSA-9796045
Reactome pathway annotation
file:human/TXN/TXN-deep-research-falcon.md
Deep research on TXN function
file:human/TXN/TXN-deep-research-cyberian.md
Cyberian deep research on TXN function

Suggested Questions for Experts

Q: What is the relative contribution of cytosolic vs nuclear Trx1 to cellular redox homeostasis?

Q: How is Trx1 secretion regulated and what are the primary extracellular functions?

Q: What determines substrate specificity among the various Trx1 targets?

Suggested Experiments

Experiment: Quantitative proteomics to identify the complete Trx1 substrate repertoire under different stress conditions

Hypothesis: Trx1 has condition-specific substrates that change depending on the type of cellular stress.

Type: Quantitative proteomics

Experiment: Live cell imaging to monitor Trx1 nuclear translocation dynamics

Hypothesis: Trx1 nuclear translocation follows specific kinetics that correlate with AP-1 activation.

Type: Live cell imaging

Experiment: Structural studies of Trx1-ASK1 complex to understand regulatory mechanism

Hypothesis: Reduced Trx1 binds ASK1 in a specific conformation that prevents kinase activation.

Type: Structural biology (cryo-EM or X-ray crystallography)

Deep Research

Cyberian

(TXN-deep-research-cyberian.md)
Human Thioredoxin (TXN): A Comprehensive Functional Annotation Report Cyberian deep-research 17 citations 2026-01-24T00:13:38.450038

Human Thioredoxin (TXN): A Comprehensive Functional Annotation Report

1. Introduction and Summary

Human thioredoxin (TXN, also known as TRX, TRX1, or TRDX) is a small (approximately 12 kDa), ubiquitous redox protein that plays central roles in cellular redox homeostasis, antioxidant defense, and signal transduction. Originally identified in Escherichia coli by Laurent et al. in 1964 as a hydrogen donor for ribonucleotide reductase, the human homolog was subsequently characterized and found to have expanded functions beyond its bacterial counterpart [holmgren-1985-thioredoxin-abstract]. Remarkably, human TXN was independently discovered as the "adult T cell leukemia-derived factor" (ADF), a secreted protein from HTLV-I-transformed T-cells with cytokine-like and chemokine-like activities, highlighting its multifunctional nature [leveillard-2017-extracellular-trx-abstract].

The primary biochemical function of thioredoxin is as a protein disulfide oxidoreductase (thiol-disulfide reductase), catalyzing the reduction of disulfide bonds in target proteins using electrons ultimately derived from NADPH via the thioredoxin reductase (TXNRD) system [lu-holmgren-2013-thioredoxin-antioxidant-abstract]. This enzymatic activity is mediated by the conserved Cys-Gly-Pro-Cys (CGPC) active site motif, which constitutes the hallmark of the thioredoxin family. The protein operates as part of the thioredoxin system—comprising NADPH, thioredoxin reductase (TXNRD1), and thioredoxin itself—which together with the glutathione-glutaredoxin system controls the cellular redox environment in mammalian cells [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

2. Catalytic Mechanism and Substrate Specificity

2.1 The Thioredoxin Fold and Active Site

The three-dimensional structure of thioredoxin, solved by both X-ray crystallography and NMR spectroscopy, reveals the canonical "thioredoxin fold" consisting of a central four-stranded β-sheet flanked by three α-helices [holmgren-1995-trx-structure-mechanism-abstract]. The redox-active site is located on a loop connecting a β-strand to an α-helix, positioning the two catalytic cysteine residues (Cys32 and Cys35 in human TXN) for optimal redox activity. This structural motif has been conserved across all domains of life and serves as the foundation for the thioredoxin superfamily, which includes protein disulfide isomerases, glutaredoxins, and numerous other thiol-disulfide oxidoreductases [fujimoto-2018-substrates-abstract].

2.2 Catalytic Mechanism

The catalytic mechanism of thioredoxin involves a two-step thiol-disulfide exchange reaction. In the first step, the more N-terminal cysteine (Cys32), which exists as a thiolate anion at physiological pH due to its unusually low pKa (~7.1), performs a nucleophilic attack on the disulfide bond of the target protein, forming a transient mixed disulfide intermediate. In the second step, the C-terminal cysteine (Cys35) attacks this mixed disulfide, releasing the reduced target protein and generating oxidized thioredoxin containing an intramolecular disulfide bond [holmgren-1995-trx-structure-mechanism-abstract].

High-resolution solution structures of human and E. coli thioredoxin in both oxidized and reduced states support this catalytic model, demonstrating conformational changes upon oxidation that are crucial for function [holmgren-1995-trx-structure-mechanism-abstract]. The oxidized thioredoxin is then regenerated to its reduced form by thioredoxin reductase (TXNRD1 in the cytosol) using electrons from NADPH [mustacich-powis-2000-txnrd-abstract].

2.3 Substrate Specificity

Thioredoxin exhibits broad substrate specificity, reducing disulfide bonds in numerous protein substrates. Key substrates include:

  1. Ribonucleotide reductase (RNR): Thioredoxin serves as the primary electron donor for RNR, the enzyme that catalyzes the rate-limiting step in DNA synthesis by converting ribonucleotides to deoxyribonucleotides. After each catalytic cycle, a disulfide bond forms at the RNR active site, which must be reduced by thioredoxin for continued activity [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  2. Peroxiredoxins (Prxs): These thiol-dependent peroxidases use thioredoxin as their primary electron donor to reduce hydrogen peroxide, organic hydroperoxides, and peroxynitrite. The thioredoxin-peroxiredoxin system constitutes a major cellular defense against oxidative stress, with reaction rates that are extremely fast [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  3. Methionine sulfoxide reductases (Msrs): Thioredoxin provides reducing equivalents to MsrA and MsrB, enzymes that repair oxidized methionine residues in proteins, thereby contributing to protein repair mechanisms [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  4. Transcription factors: Multiple redox-sensitive transcription factors including NF-κB, AP-1, p53, HIF-1α, and others contain critical cysteine residues in their DNA-binding domains that must be reduced for DNA binding activity. Thioredoxin directly or indirectly reduces these cysteines to regulate transcription factor activity [sen-packer-1996-redox-regulation-abstract].

3. Subcellular Localization

3.1 Cytoplasmic and Nuclear Distribution

Human thioredoxin-1 (TXN) is predominantly a cytoplasmic protein under basal conditions, but it translocates to the nucleus in response to various stimuli including oxidative stress, cell density changes, and growth factor stimulation [spielberger-2008-trx-localization-abstract]. Studies have demonstrated that the subcellular distribution of thioredoxin is dynamic and influenced by the cellular redox environment. In sparse cell cultures with higher reactive oxygen species (ROS) levels, thioredoxin-1 is predominantly nuclear, whereas in confluent cultures it is predominantly cytoplasmic [spielberger-2008-trx-localization-abstract].

The nuclear localization of thioredoxin is functionally significant, as it enables the reduction of redox-sensitive transcription factors. Research has shown that the redox state of key transcription factors like NF-κB differs between the cytoplasm and nucleus: the critical cysteine residue (Cys-62 of p50) is highly oxidized in the cytoplasm and must be converted to a reduced form in the nucleus to enable DNA binding [ando-2008-ape1-ref1-abstract]. Thioredoxin, together with APE1/Ref-1, mediates this nuclear reduction and activation.

3.2 Mitochondrial Thioredoxin

Mammalian cells possess a separate mitochondrial thioredoxin system, consisting of thioredoxin-2 (TXN2) and mitochondrial thioredoxin reductase (TXNRD2). This compartmentalized system is critical for mitochondrial redox homeostasis and protection against oxidative stress. Thioredoxin-2 has been identified as a critical regulator of cytochrome c release and mitochondrial apoptosis [masutani-2005-trx-apoptosis-abstract].

3.3 Extracellular Secretion

A striking feature of human thioredoxin is its secretion from cells despite lacking a classical N-terminal signal peptide. Human TXN was originally discovered as a secreted protein (ADF) from HTLV-I-transformed T-cells [leveillard-2017-extracellular-trx-abstract]. Thioredoxin secretion is induced by various stimuli including oxidative stress and cytokine stimulation. The secretion mechanism remains incompletely understood but is classified as unconventional protein secretion [leveillard-2017-extracellular-trx-abstract].

Extracellular thioredoxin exhibits cytokine-like and chemokine-like activities. A complete extracellular thioredoxin system exists in blood, with circulating TXN1 and TXNRD1 detected in plasma. However, the source of extracellular NADPH required for thioredoxin recycling remains mysterious. In the absence of regenerative capacity, extracellular thioredoxins may paradoxically act as pro-oxidant rather than antioxidant agents [leveillard-2017-extracellular-trx-abstract].

TRX80, an 80-amino acid N-terminal truncated form of thioredoxin-1, is generated by cleavage via ADAM10 and ADAM17 metalloproteinases in monocytes. TRX80 has distinct biological activities from full-length thioredoxin, acting as a cytokine for monocytes, promoting proinflammatory macrophage phenotype, and activating complement pathways [leveillard-2017-extracellular-trx-abstract].

4. Signaling Pathways and Transcription Factor Regulation

4.1 The Thioredoxin-APE1/Ref-1 Redox Signaling Pathway

One of the most important functions of thioredoxin is the regulation of redox-sensitive transcription factors. At least two major transcription factors, NF-κB and AP-1, have been identified as regulated by the intracellular redox state, with thioredoxin playing a central role [sen-packer-1996-redox-regulation-abstract].

The multifunctional protein APE1/Ref-1 (apurinic/apyrimidinic endonuclease 1/redox factor 1) cooperates with thioredoxin in this regulatory pathway. APE1/Ref-1 not only directly reduces target transcription factors but also facilitates their reduction by other reducing molecules including glutathione and thioredoxin—a function termed "redox chaperone activity" [ando-2008-ape1-ref1-abstract]. This redox chaperone activity operates at significantly lower concentrations than required for direct redox activity and is independent of APE1/Ref-1's own cysteine residues, suggesting a conformational facilitation mechanism.

4.2 NF-κB Regulation

NF-κB is a critical transcription factor regulating immune responses, inflammation, and cell survival. The redox-sensitive cysteine residue Cys-62 in the p50 subunit of NF-κB must be reduced for efficient DNA binding. Thioredoxin, working with APE1/Ref-1, reduces this cysteine in the nucleus to enable transcriptional activation [ando-2008-ape1-ref1-abstract][hirota-2000-nucleoredoxin-abstract].

Interestingly, thioredoxin, glutaredoxin, and nucleoredoxin differentially regulate NF-κB, AP-1, and CREB activation in cells. These redox molecules have distinct subcellular localizations and differentially modulate transcription factor activation induced by TNFα, PMA, and other stimuli [hirota-2000-nucleoredoxin-abstract].

4.3 AP-1 Regulation

The transcription factor AP-1 (composed of c-Fos and c-Jun heterodimers) is regulated by thioredoxin through reduction of conserved cysteine residues in the basic leucine zipper (bZIP) DNA-binding domains (Cys-272 of c-Fos and Cys-154 of c-Jun). APE1/Ref-1 promotes the reduction of both c-Fos and c-Jun bZIP domains by thioredoxin or glutathione, facilitating AP-1 DNA binding activity [ando-2008-ape1-ref1-abstract].

4.4 Other Transcription Factors

Thioredoxin also regulates the activity of numerous other transcription factors including:
- p53: The tumor suppressor p53 requires reduced cysteine residues for DNA binding; thioredoxin maintains p53 in its active reduced state
- HIF-1α: Hypoxia-inducible factor 1α, critical for oxygen sensing and angiogenesis
- Pax proteins: Paired box transcription factors important in development
- Egr-1: Early growth response factor involved in cell proliferation
- STAT3: Signal transducer and activator of transcription 3

[thakur-2014-ape1-ref1-abstract]

4.5 ASK1-Thioredoxin Interaction and Apoptosis Signaling

A critical signaling pathway involving thioredoxin is its interaction with apoptosis signal-regulating kinase 1 (ASK1), a MAP kinase kinase kinase that lies upstream of JNK and p38 MAPK pathways leading to apoptosis. Reduced thioredoxin binds directly to ASK1 and inhibits its kinase activity. Upon oxidative stress, thioredoxin becomes oxidized and dissociates from ASK1, allowing ASK1 activation and downstream apoptotic signaling [masutani-2005-trx-apoptosis-abstract].

Research has demonstrated that cell exposure to H₂O₂ causes rapid oxidation of ASK1, leading to its multimerization through interchain disulfide bonds. During the subsequent reduction phase, thioredoxin-1 becomes covalently associated with ASK1 to restore its reduced monomeric state. Overexpression of thioredoxin accelerates ASK1 reduction and impairs JNK activation and apoptosis [nadeau-2007-ask1-trx-abstract]. This establishes thioredoxin as a sensor of oxidative stress that modulates the apoptotic threshold.

4.6 TXNIP Interaction

Thioredoxin-interacting protein (TXNIP, also known as TBP-2 or vitamin D₃ upregulated protein 1/VDUP1) is a negative regulator of thioredoxin. TXNIP binds to reduced thioredoxin and inhibits its reducing activity. The TXNIP-thioredoxin interaction has been implicated in metabolic regulation, including glucose and lipid metabolism, and in tumor suppression [lillig-holmgren-2007-trx-related-molecules-abstract].

5. The Thioredoxin System as an Antioxidant Defense

5.1 The Complete Thioredoxin System

The mammalian thioredoxin system consists of three components: NADPH (the ultimate electron donor), thioredoxin reductase (TXNRD), and thioredoxin itself. NADPH is generated primarily through the pentose phosphate pathway, linking thioredoxin function to glucose metabolism [leveillard-2017-extracellular-trx-abstract].

Mammalian thioredoxin reductases (TXNRD1, TXNRD2, and TXNRD3) are distinct from bacterial enzymes in that they are high molecular weight selenoenzymes containing an essential selenocysteine residue at the C-terminus [mustacich-powis-2000-txnrd-abstract]. The selenocysteine-containing C-terminal motif (-Cys-SeCys-) provides mammalian thioredoxin reductases with broader substrate specificity compared to their bacterial counterparts.

5.2 Crosstalk with Glutathione System

The thioredoxin and glutathione systems were traditionally viewed as parallel but independent antioxidant pathways. However, recent research has revealed significant crosstalk between these systems, with each capable of serving as a backup for the other under conditions of impairment [lu-holmgren-2013-thioredoxin-antioxidant-abstract]. Glutaredoxins can accept electrons from glutathione and reduce some overlapping substrates with thioredoxin.

5.3 Peroxiredoxin Reduction

A major antioxidant function of thioredoxin is providing electrons to peroxiredoxins (Prxs), a family of thiol-dependent peroxidases that catalyze the reduction of H₂O₂, organic hydroperoxides, and peroxynitrite. The thioredoxin-peroxiredoxin system represents a highly efficient mechanism for hydrogen peroxide removal, with extremely fast reaction rates [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

6. Structure-Function Relationships

6.1 The Thioredoxin Fold

The thioredoxin fold represents one of the most ancient and conserved protein structural motifs, found across all domains of life. The core structure consists of a central four-stranded β-sheet flanked by α-helices, with the redox-active CXXC motif positioned at the N-terminus of an α-helix [fujimoto-2018-substrates-abstract].

The thioredoxin superfamily encompasses numerous proteins sharing this fold, including:
- Thioredoxins (cytosolic, mitochondrial)
- Glutaredoxins
- Protein disulfide isomerases
- Glutathione peroxidases (some family members)
- Peroxiredoxins

6.2 Active Site Properties and the CXXC Rheostat

The catalytic cysteines in human thioredoxin (Cys32-Gly-Pro-Cys35) exhibit distinct chemical properties. The N-terminal Cys32 has a low pKa (~7.1) due to its local environment, existing predominantly as the reactive thiolate anion at physiological pH. This nucleophilic thiolate initiates the catalytic cycle by attacking substrate disulfides. The proline residue creates a characteristic kink in the active site loop, and glycine provides conformational flexibility [holmgren-1995-trx-structure-mechanism-abstract].

The CXXC motif functions as a biochemical "rheostat" that determines the reduction potential of thiol-disulfide oxidoreductases [chivers-1997-cxxc-motif-abstract]. The identity of the XX dipeptide between the two catalytic cysteines profoundly affects the redox properties: the pKa of the N-terminal cysteine correlates with the reduction potential, such that lower pKa values make the disulfide bond easier to reduce. However, formal analysis of the Nernst equation reveals that reduction potential contains both pH-dependent and pH-independent components. The differences in reduction potential between thioredoxin (CGPC, approximately -270 mV) and other thiol-disulfide oxidoreductases like DsbA (CPHC, approximately -120 mV) cannot be explained solely by thiol pKa values, indicating that additional structural factors contribute to tuning the redox potential [chivers-1997-cxxc-motif-abstract]. These intricacies enable the thioredoxin superfamily to span a wide range of reduction potentials and thereby serve diverse biochemical roles.

7. Genetic Evidence for Essential Functions

The essential nature of thioredoxin has been demonstrated through genetic studies in model organisms. Global deletion of thioredoxin-1 in mice results in embryonic lethality, underscoring its essential role in development. To circumvent this lethality, tissue-specific knockout models have been generated that provide critical insights into thioredoxin function in specific organs.

Cardiac-specific thioredoxin-1 knockout (Trx1cKO) mice were viable at birth but died with a median survival age of only 25.5 days [oka-2020-trx1-knockout-heart-abstract]. These mice developed severe heart failure characterized by contractile dysfunction, hypertrophy, increased fibrosis, and apoptotic cell death. RNA-sequencing revealed marked downregulation of genes involved in energy production, and mitochondrial morphological abnormalities were evident. Even heterozygous cardiac Trx1 knockout mice, while viable at baseline, showed exacerbated cardiac dysfunction under pressure-overload stress, demonstrating haploinsufficiency under stress conditions.

Mechanistically, this study revealed that thioredoxin-1 regulates the mechanistic target of rapamycin (mTOR) through reduction of Cys1483. In Trx1cKO hearts, mTOR was more oxidized, and phosphorylation of mTOR substrates (S6K and 4EBP1) was impaired. An oxidation-resistant mTOR mutant (C1483F) prevented the metabolic gene suppression caused by thioredoxin knockdown, directly demonstrating that thioredoxin maintains mTOR function through redox regulation [oka-2020-trx1-knockout-heart-abstract]. These findings establish that endogenous thioredoxin is essential for maintaining cardiac function and metabolism through mTOR-mediated regulation of mitochondrial gene expression.

8. Implications for Disease and Therapeutic Applications

Thioredoxin has been implicated in numerous disease contexts:

  1. Cancer: Thioredoxin and thioredoxin reductase are often overexpressed in tumors, contributing to tumor cell survival under oxidative stress and resistance to chemotherapy. Thioredoxin inhibition represents a potential therapeutic strategy [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  2. Infectious Diseases: The distinct structural features of mammalian versus bacterial thioredoxin reductases offer opportunities for selective targeting of pathogenic bacteria [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  3. Cardiovascular Disease: Extracellular thioredoxin levels serve as biomarkers for oxidative stress and inflammation in various conditions including acute lung injury [lu-holmgren-2013-thioredoxin-antioxidant-abstract].

  4. Neurodegeneration: The thioredoxin system plays protective roles against oxidative damage in neurons.

9. Open Questions

Despite extensive research on thioredoxin over several decades, several important questions remain:

  1. Secretion Mechanism: The unconventional secretion pathway for thioredoxin remains poorly understood. How does this cytosolic protein without a signal peptide reach the extracellular space?

  2. Extracellular NADPH: The source of extracellular NADPH required for regeneration of secreted thioredoxin remains mysterious. In its absence, what determines whether extracellular thioredoxin acts as a reductant or oxidant?

  3. Substrate Selectivity Determinants: What structural features beyond the CXXC motif and thioredoxin fold determine the specificity of thioredoxin for particular protein substrates?

  4. Nuclear Import Mechanism: The mechanism by which thioredoxin translocates to the nucleus in response to oxidative stress requires further characterization.

  5. TRX80 Signaling: The receptors and signaling pathways mediating the cytokine-like activities of TRX80 remain incompletely characterized.

  6. Tissue-Specific Functions: How does thioredoxin function differ across different tissues and cell types, and what accounts for these differences?

  7. Therapeutic Window: Can thioredoxin or thioredoxin reductase be selectively targeted in disease states without disrupting essential cellular functions?

10. References

  • holmgren-1985-thioredoxin-abstract: Holmgren A. Thioredoxin. Annu Rev Biochem. 1985;54:237-71. PMID: 3896121. DOI: 10.1146/annurev.bi.54.070185.001321

  • lu-holmgren-2013-thioredoxin-antioxidant-abstract: Lu J, Holmgren A. The thioredoxin antioxidant system. Free Radic Biol Med. 2013;66:75-87. PMID: 23899494. DOI: 10.1016/j.freeradbiomed.2013.07.036

  • holmgren-1995-trx-structure-mechanism-abstract: Holmgren A. Thioredoxin structure and mechanism: conformational changes on oxidation of the active-site sulfhydryls to a disulfide. Structure. 1995;3(3):239-43. PMID: 7788289. DOI: 10.1016/s0969-2126(01)00153-8

  • mustacich-powis-2000-txnrd-abstract: Mustacich D, Powis G. Thioredoxin reductase. Biochem J. 2000;346 Pt 1:1-8. PMID: 10657232. PMC: PMC1220815.

  • sen-packer-1996-redox-regulation-abstract: Sen CK, Packer L. Antioxidant and redox regulation of gene transcription. FASEB J. 1996;10(7):709-20. PMID: 8635688. DOI: 10.1096/fasebj.10.7.8635688

  • hirota-2000-nucleoredoxin-abstract: Hirota K, et al. Nucleoredoxin, glutaredoxin, and thioredoxin differentially regulate NF-kappaB, AP-1, and CREB activation in HEK293 cells. Biochem Biophys Res Commun. 2000;274(1):177-82. PMID: 10903915. DOI: 10.1006/bbrc.2000.3106

  • leveillard-2017-extracellular-trx-abstract: Léveillard T, Aït-Ali N. Cell Signaling with Extracellular Thioredoxin and Thioredoxin-Like Proteins: Insight into Their Mechanisms of Action. Oxid Med Cell Longev. 2017;2017:8475125. PMID: 29138681. PMC: PMC5613632. DOI: 10.1155/2017/8475125

  • ando-2008-ape1-ref1-abstract: Ando K, et al. A new APE1/Ref-1-dependent pathway leading to reduction of NF-kappaB and AP-1, and activation of their DNA-binding activity. Nucleic Acids Res. 2008;36(13):4327-36. PMID: 18586825. PMC: PMC2490748. DOI: 10.1093/nar/gkn416

  • nadeau-2007-ask1-trx-abstract: Nadeau PJ, et al. Disulfide Bond-mediated multimerization of Ask1 and its reduction by thioredoxin-1 regulate H(2)O(2)-induced c-Jun NH(2)-terminal kinase activation and apoptosis. Mol Biol Cell. 2007;18(10):3903-13. PMID: 17652454. PMC: PMC1995733. DOI: 10.1091/mbc.e07-05-0491

  • masutani-2005-trx-apoptosis-abstract: Masutani H, et al. The thioredoxin system in retroviral infection and apoptosis. Cell Death Differ. 2005;12 Suppl 1:991-8. PMID: 15818395. DOI: 10.1038/sj.cdd.4401625

  • spielberger-2008-trx-localization-abstract: Spielberger JC, et al. Oxidation and nuclear localization of thioredoxin-1 in sparse cell cultures. J Cell Biochem. 2008;104(5):1879-89. PMID: 18384140. DOI: 10.1002/jcb.21762

  • lillig-holmgren-2007-trx-related-molecules-abstract: Lillig CH, Holmgren A. Thioredoxin and related molecules--from biology to health and disease. Antioxid Redox Signal. 2007;9(1):25-47. PMID: 17115886. DOI: 10.1089/ars.2007.9.25

  • hirota-2002-trx-superfamily-abstract: Hirota K, et al. Thioredoxin superfamily and thioredoxin-inducing agents. Ann N Y Acad Sci. 2002;957:189-99. PMID: 12074972. DOI: 10.1111/j.1749-6632.2002.tb02916.x

  • fujimoto-2018-substrates-abstract: Fujimoto T, et al. Methods to identify the substrates of thiol-disulfide oxidoreductases. Protein Sci. 2018;28(1):30-40. PMID: 30341785. PMC: PMC6295885. DOI: 10.1002/pro.3530

  • thakur-2014-ape1-ref1-abstract: Thakur S, et al. APE1/Ref-1 as an emerging therapeutic target for various human diseases: phytochemical modulation of its functions. Exp Mol Med. 2014;46(7):e106. PMID: 25033834. PMC: PMC4119211. DOI: 10.1038/emm.2014.42

  • oka-2020-trx1-knockout-heart-abstract: Oka SI, et al. Thioredoxin-1 maintains mitochondrial function via mechanistic target of rapamycin signalling in the heart. Cardiovasc Res. 2020;116(10):1742-1755. PMID: 31584633. PMC: PMC7825501. DOI: 10.1093/cvr/cvz251

  • chivers-1997-cxxc-motif-abstract: Chivers PT, Prehoda KE, Raines RT. The CXXC motif: a rheostat in the active site. Biochemistry. 1997;36(14):4061-6. PMID: 9099998. DOI: 10.1021/bi9628580

Citations

  1. ando-2008-ape1-ref1-abstract.md
  2. chivers-1997-cxxc-motif-abstract.md
  3. fujimoto-2018-substrates-abstract.md
  4. hirota-2000-nucleoredoxin-abstract.md
  5. hirota-2002-trx-superfamily-abstract.md
  6. holmgren-1985-thioredoxin-abstract.md
  7. holmgren-1995-trx-structure-mechanism-abstract.md
  8. leveillard-2017-extracellular-trx-abstract.md
  9. lillig-holmgren-2007-trx-related-molecules-abstract.md
  10. lu-holmgren-2013-thioredoxin-antioxidant-abstract.md
  11. masutani-2005-trx-apoptosis-abstract.md
  12. mustacich-powis-2000-txnrd-abstract.md
  13. nadeau-2007-ask1-trx-abstract.md
  14. oka-2020-trx1-knockout-heart-abstract.md
  15. sen-packer-1996-redox-regulation-abstract.md
  16. spielberger-2008-trx-localization-abstract.md
  17. thakur-2014-ape1-ref1-abstract.md

Falcon

(TXN-deep-research-falcon.md)
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate. Falcon Edison Scientific Literature 17 citations 2025-12-12T23:56:12.970281

The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.

You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.

We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.

We are interested in where in or outside the cell the gene product carries out its function.

We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.

Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.

Plan status update: Identity verified and evidence gathered from recent peer-reviewed sources (2023–2024) with supplemental mechanistic reviews. The gene symbol TXN (also known as TRX, TRX1) corresponds to human thioredoxin-1 (UniProt P10599), a canonical member of the thioredoxin family with the conserved redox-active motif Cys-Gly-Pro-Cys (CGPC) and thioredoxin fold; organism is Homo sapiens. The following report synthesizes current knowledge with emphasis on 2023–2024 developments and includes URLs and publication dates where available (citations given as context IDs).

Comprehensive Research Report: Human TXN (Thioredoxin-1; UniProt P10599)

1) Key concepts and definitions; catalytic mechanism and substrates
- Definition and family: Thioredoxin-1 (Trx1) is a ~12 kDa oxidoreductase of the thioredoxin family that maintains protein cysteines in reduced states and transduces redox signals. It contains a conserved active-site CGPC motif within the thioredoxin fold (five β-strands/four α-helices), defining its dithiol–disulfide exchange activity (Antioxidants; published 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2, seitz2024exploringthethioredoxin pages 16-18).
- Catalytic mechanism: Trx1 reduces disulfide bonds via a two-step nucleophilic substitution: Cys32 attacks the substrate disulfide to form a mixed disulfide intermediate, and Cys35 resolves it to release the reduced substrate while forming the Cys32–Cys35 intramolecular disulfide in Trx1; thioredoxin reductase (TrxR, an NADPH/FAD-dependent enzyme) then reduces Trx1 back to its dithiol state (Antioxidants; 2023 review synthesizing mechanism with underlying primary literature; 26 Apr 2023; https://doi.org/10.3390/antiox12040944) (alokda2023evolutionarilyconservedrole pages 2-4).
- Physiologic substrates and partners: Major substrates include peroxiredoxins (for H2O2 detoxification and signaling), ribonucleotide reductase (RNR) for deoxyribonucleotide synthesis, and diverse transcription factors and signaling proteins whose cysteines govern activity; Trx1 is kept reduced by cytosolic TrxR1 using NADPH (Antioxidants 2024; https://doi.org/10.3390/antiox13091078; Antioxidants 2023; https://doi.org/10.3390/antiox12040944) (seitz2024exploringthethioredoxin pages 1-2, alokda2023evolutionarilyconservedrole pages 2-4).
- Regulatory cysteines and PTMs: In addition to the catalytic Cys32/Cys35, human Trx1 contains noncatalytic Cys62, Cys69, and Cys73 that undergo redox PTMs (e.g., S-nitrosylation, S-glutathionylation) influencing function and interactions (Molecular Medicine Reports; online ahead 2025; https://doi.org/10.3892/mmr.2025.13737) (wang2026involvementofthe pages 1-2).

2) Recent developments (2023–2024): structure, signaling, ferroptosis, ion channel regulation, ER redox localization
- Structural and mechanistic consolidations: Recent reviews reaffirm Trx1’s CGPC active site and system components (Trx/TrxR/NADPH), connecting structural motif to oxidoreductase function and therapeutic interest, especially in cancer where elevated ROS enhances reliance on the Trx system (Antioxidants; 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2).
- ASK1 redox signaling: Contemporary syntheses highlight Trx1’s inhibitory interaction with apoptosis signal-regulating kinase 1 (ASK1). Under basal conditions reduced Trx1 binds ASK1 and suppresses its activation; oxidative stress or TXNIP disrupts Trx1–ASK1, enabling JNK/p38 MAPK signaling and apoptosis (Antioxidants; 26 Apr 2023; https://doi.org/10.3390/antiox12040944) (alokda2023evolutionarilyconservedrole pages 2-4).
- Ferroptosis/autophagy cross-talk: The thioredoxin system is increasingly linked to regulated cell death. A 2025 review (synthesizing recent primary data) concludes Trx1 generally inhibits ferroptosis and apoptosis, while TXNIP promotes them, integrating Trx/TXNIP with autophagy–ferroptosis crosstalk (Molecular Medicine Reports; Nov 2025; https://doi.org/10.3892/mmr.2025.13737) (wang2026involvementofthe pages 1-2).
- ER redox compartmentalization: New work emphasizes that thioredoxin/thioredoxin reductase activity is largely absent from the ER lumen in mammalian cells, explaining parallel existence of a reduced pyridine nucleotide pool with an oxidizing protein-disulfide pool necessary for oxidative folding; mislocalization of Trx1/TrxR1 to ER lumen can be cytotoxic (2024 review synthesis) (seitz2024exploringthethioredoxin pages 1-2).

3) Cellular and extracellular localization; regulation (including secretion, nuclear roles, TXNIP)
- Subcellular distribution: Trx1 is predominantly cytosolic but also traffics to the nucleus and can appear extracellularly; distinct isoforms include mitochondrial Trx2 (TXN2). Gene regulation of TXN involves ubiquitous promoter elements and stress-responsive ARE/Nrf2 input (synthesis of primary literature) (shcholok2023examinationofcellular pages 24-29).
- Secretion and extracellular roles: Trx1 can be secreted via leaderless pathways (e.g., by immune cells), and a truncated extracellular form (Trx80) has been described, suggesting paracrine immunomodulatory roles (review synthesis, 2023) (shcholok2023examinationofcellular pages 24-29).
- Nuclear functions: Trx1 reduces critical cysteines in transcriptional regulators either directly or via APE1/Ref-1, thereby modulating DNA-binding activity of factors such as NF-κB and AP‑1; this connects cellular redox to gene expression programs (2023 review) (alokda2023evolutionarilyconservedrole pages 14-15, alokda2023evolutionarilyconservedrole pages 2-4).
- Regulation by TXNIP: TXNIP (VDUP1) forms inhibitory mixed disulfide complexes with Trx1, suppressing Trx1 reductase activity and freeing ASK1 to activate stress MAPKs; TXNIP expression increases with hyperglycemic cues and ER stress, linking metabolism to redox signaling (Metabolites; 13 May 2025; https://doi.org/10.3390/metabo15060351) (kokkinopoulou2025thioredoxininteractingprotein(txnip) pages 2-5).

4) Pathway integration: peroxiredoxins, RNR, and APE1/Ref-1-dependent transcription
- Peroxiredoxin cycle: Trx1 reduces oxidized peroxiredoxins (Prx-S2), enabling H2O2 detoxification and redox relay signaling; TrxR1 sustains Trx1 in its active dithiol state with NADPH (Antioxidants; 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2).
- DNA synthesis: Trx1 serves as an electron donor to ribonucleotide reductase (RNR), supporting deoxyribonucleotide production for DNA replication/repair; this underlies links between Trx1 activity and cell-cycle progression (Antioxidants; 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2).
- Redox control of transcription: Through direct reduction and APE1/Ref-1-dependent redox regulation, Trx1 influences NF‑κB and AP-1 DNA binding and downstream inflammatory/antioxidant programs (2023 overview) (alokda2023evolutionarilyconservedrole pages 14-15).

5) Applications and translational relevance; expert opinions; recent statistics/data
- Cancer biology and targeting: Tumors’ high ROS burdens create dependency on the Trx system for redox homeostasis and signaling; reviews argue this makes Trx/TrxR an attractive therapeutic axis, with multiple chemical classes (e.g., electrophiles) targeting selenocysteine in TrxR and perturbing Trx1-dependent networks (Antioxidants; 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2, seitz2024exploringthethioredoxin pages 16-18).
- Therapeutic combinations and synthetic lethalities: Integrative analyses emphasize that inhibiting the Trx system can sensitize cancer cells to replication stress and oxidative damage by limiting RNR reduction and Prx recycling; expert opinion in 2024 reviews suggests combining Trx/TrxR inhibitors with agents that elevate ROS or induce replication stress (Antioxidants; 4 Sep 2024; https://doi.org/10.3390/antiox13091078) (seitz2024exploringthethioredoxin pages 1-2, seitz2024exploringthethioredoxin pages 16-18).
- Systems and disease breadth: Contemporary reviews connect Trx1/TXNIP axis to cardiovascular, neurodegenerative, and metabolic diseases via modulation of ASK1, inflammasome activation, and mitochondrial redox crosstalk, highlighting biomarker and therapeutic opportunities (Antioxidants; 26 Apr 2023; https://doi.org/10.3390/antiox12040944; Metabolites; 13 May 2025; https://doi.org/10.3390/metabo15060351) (alokda2023evolutionarilyconservedrole pages 2-4, kokkinopoulou2025thioredoxininteractingprotein(txnip) pages 2-5).

Gene/protein identity verification and domain alignment
- The gene symbol TXN unambiguously refers to human thioredoxin-1 (UniProt P10599), a thioredoxin family member with the hallmark CGPC catalytic motif and thioredoxin fold; sources above are specific to Homo sapiens Trx1 and its mammalian system (Antioxidants 2024; Antioxidants 2023) (seitz2024exploringthethioredoxin pages 1-2, alokda2023evolutionarilyconservedrole pages 2-4).

Notes on limitations and open questions
- While the 2023–2024 literature robustly supports TXN’s catalytic mechanism, peroxiredoxin/RNR roles, and ASK1 pathway regulation, finer-grained 2024 structural insights (e.g., cryo‑EM of ASK1 complexes), ER-lumen exclusion experiments, and ion-channel redox regulation advances are primarily consolidated in reviews rather than fully detailed here due to source availability constraints in the present evidence set (seitz2024exploringthethioredoxin pages 1-2, alokda2023evolutionarilyconservedrole pages 2-4). Where 2025 reviews are cited (TXNIP–ferroptosis/autophagy), they synthesize late‑2023/2024 primary literature but should be cross-validated with the underlying studies for application-specific decisions (wang2026involvementofthe pages 1-2, kokkinopoulou2025thioredoxininteractingprotein(txnip) pages 2-5).

References (with URLs and publication dates)
- Seitz R et al. Exploring the thioredoxin system as a therapeutic target in cancer. Antioxidants. 4 Sep 2024. URL: https://doi.org/10.3390/antiox13091078 (seitz2024exploringthethioredoxin pages 1-2, seitz2024exploringthethioredoxin pages 16-18).
- AlOkda A, Van Raamsdonk JM. Evolutionarily Conserved Role of Thioredoxin Systems in Determining Longevity. Antioxidants. 26 Apr 2023. URL: https://doi.org/10.3390/antiox12040944 (alokda2023evolutionarilyconservedrole pages 14-15, alokda2023evolutionarilyconservedrole pages 2-4).
- Kokkinopoulou I, Papadopoulou A. Thioredoxin-Interacting Protein (TXNIP) in Gestational Diabetes Mellitus. Metabolites. 13 May 2025. URL: https://doi.org/10.3390/metabo15060351 (kokkinopoulou2025thioredoxininteractingprotein(txnip) pages 2-5).
- Wang W et al. Involvement of the thioredoxin system in multiple diseases: autophagy and ferroptosis. Mol Med Rep. Nov 2025. URL: https://doi.org/10.3892/mmr.2025.13737 (wang2026involvementofthe pages 1-2).
- Shcholok T. Examination of cellular and molecular changes associated with neuronal thioredoxin-1 deficiency. 2023. Selected mechanistic summaries and localization/regulation context (shcholok2023examinationofcellular pages 24-29, shcholok2023examinationofcellular pages 116-118).

References

  1. (seitz2024exploringthethioredoxin pages 1-2): Rebecca Seitz, Deniz Tümen, Claudia Kunst, Phillip Heumann, Stephan Schmid, Arne Kandulski, Martina Müller, and Karsten Gülow. Exploring the thioredoxin system as a therapeutic target in cancer: mechanisms and implications. Antioxidants, Sep 2024. URL: https://doi.org/10.3390/antiox13091078, doi:10.3390/antiox13091078. This article has 32 citations and is from a poor quality or predatory journal.

  2. (seitz2024exploringthethioredoxin pages 16-18): Rebecca Seitz, Deniz Tümen, Claudia Kunst, Phillip Heumann, Stephan Schmid, Arne Kandulski, Martina Müller, and Karsten Gülow. Exploring the thioredoxin system as a therapeutic target in cancer: mechanisms and implications. Antioxidants, Sep 2024. URL: https://doi.org/10.3390/antiox13091078, doi:10.3390/antiox13091078. This article has 32 citations and is from a poor quality or predatory journal.

  3. (alokda2023evolutionarilyconservedrole pages 2-4): Abdelrahman AlOkda and Jeremy M. Van Raamsdonk. Evolutionarily conserved role of thioredoxin systems in determining longevity. Antioxidants, 12:944, Apr 2023. URL: https://doi.org/10.3390/antiox12040944, doi:10.3390/antiox12040944. This article has 25 citations and is from a poor quality or predatory journal.

  4. (wang2026involvementofthe pages 1-2): Weihua Wang, Yingdong Mou, Dunlin Lu, and Shanshan Xu. Involvement of the thioredoxin system in multiple diseases: a focus on mechanisms of action in autophagy and ferroptosis (review). Molecular Medicine Reports, 33:1-16, Nov 2025. URL: https://doi.org/10.3892/mmr.2025.13737, doi:10.3892/mmr.2025.13737. This article has 0 citations and is from a peer-reviewed journal.

  5. (shcholok2023examinationofcellular pages 24-29): T Shcholok. Examination of cellular and molecular changes associated with neuronal thioredoxin-1 deficiency. Unknown journal, 2023.

  6. (alokda2023evolutionarilyconservedrole pages 14-15): Abdelrahman AlOkda and Jeremy M. Van Raamsdonk. Evolutionarily conserved role of thioredoxin systems in determining longevity. Antioxidants, 12:944, Apr 2023. URL: https://doi.org/10.3390/antiox12040944, doi:10.3390/antiox12040944. This article has 25 citations and is from a poor quality or predatory journal.

  7. (kokkinopoulou2025thioredoxininteractingprotein(txnip) pages 2-5): Ioanna Kokkinopoulou and Anna Papadopoulou. Thioredoxin-interacting protein (txnip) in gestational diabetes mellitus. Metabolites, 15:351, May 2025. URL: https://doi.org/10.3390/metabo15060351, doi:10.3390/metabo15060351. This article has 2 citations and is from a poor quality or predatory journal.

  8. (shcholok2023examinationofcellular pages 116-118): T Shcholok. Examination of cellular and molecular changes associated with neuronal thioredoxin-1 deficiency. Unknown journal, 2023.

Citations

  1. alokda2023evolutionarilyconservedrole pages 2-4
  2. wang2026involvementofthe pages 1-2
  3. seitz2024exploringthethioredoxin pages 1-2
  4. shcholok2023examinationofcellular pages 24-29
  5. alokda2023evolutionarilyconservedrole pages 14-15
  6. seitz2024exploringthethioredoxin pages 16-18
  7. shcholok2023examinationofcellular pages 116-118
  8. https://doi.org/10.3390/antiox13091078
  9. https://doi.org/10.3390/antiox12040944
  10. https://doi.org/10.3390/antiox13091078;
  11. https://doi.org/10.3892/mmr.2025.13737
  12. https://doi.org/10.3390/metabo15060351
  13. https://doi.org/10.3390/antiox12040944;
  14. https://doi.org/10.3390/antiox13091078,
  15. https://doi.org/10.3390/antiox12040944,
  16. https://doi.org/10.3892/mmr.2025.13737,
  17. https://doi.org/10.3390/metabo15060351,

OpenAI

(TXN-deep-research-openai.md)
TXN (Thioredoxin-1) – Function, Roles, and Significance OpenAI o3-deep-research-2025-06-26 100 citations 2025-12-13T00:06:53.836507

TXN (Thioredoxin-1) – Function, Roles, and Significance

Gene and Protein Overview

The TXN gene in humans encodes thioredoxin-1 (Trx1), a small (~12 kDa), ubiquitously expressed protein that plays a central role in cellular redox homeostasis (www.mdpi.com). Thioredoxin-1 is characterized by a highly conserved active-site motif Cys-Gly-Pro-Cys (at residues Cys32 and Cys35 in the human protein) that directly mediates its redox activity (www.mdpi.com). This protein was originally discovered in E. coli in 1964 as an electron donor for ribonucleotide reductase (the enzyme needed for deoxyribonucleotide synthesis) (www.mdpi.com). The human TXN gene product was later independently identified as “Adult T-cell leukemia-derived factor” (ADF), a factor secreted by HTLV-I–infected T-cells that could stimulate IL-2 receptor expression (www.mdpi.com). TXN is also known by synonyms TRX, TRX1, or TRDX, and it belongs to the thioredoxin family of thiol-disulfide oxidoreductases. Like others in this family, Trx1 adopts the classic thioredoxin fold (a four-stranded β-sheet flanked by α-helices) and contains the signature -Cys-X-X-Cys- active site (www.mdpi.com). This fold is evolutionarily ancient and is shared by numerous redox proteins such as glutaredoxins, peroxiredoxins, and protein disulfide isomerases (www.mdpi.com). Consistent with its fundamental role, thioredoxin-1 is essential for life – knockout of the TXN gene in mice causes early embryonic lethality (www.mdpi.com), underscoring that Trx1 is “one of the most important proteins for proper cell and organ function.” (www.mdpi.com)

Biochemical Function and Mechanism

Thioredoxin-1 functions as a thiol oxidoreductase, catalyzing dithiol–disulfide exchange reactions that reduce disulfide bonds in target proteins (pmc.ncbi.nlm.nih.gov). In its reduced state, Trx1 has two free thiol groups in the Cys32–Cys35 active site. These cysteine thiols can attack disulfide bonds in substrate proteins, forming a transient mixed disulfide and ultimately reducing the substrate (restoring its cysteine thiols) while Trx1 itself becomes oxidized (forming an intramolecular Cys32–Cys35 disulfide) (pmc.ncbi.nlm.nih.gov). Through this reversible oxidation of its active-center dithiol, Trx1 directly maintains other proteins’ cysteine residues in a reduced (active) state (www.mdpi.com) (pmc.ncbi.nlm.nih.gov). Notably, Trx1’s action restores the function of proteins inactivated by oxidative disulfide formation. For example, an important substrate of Trx1 is peroxiredoxin (Prx), an antioxidant enzyme that neutralizes hydrogen peroxide; Trx1 reduces the oxidized disulfide form of Prx, allowing Prx to detoxify additional peroxides (pmc.ncbi.nlm.nih.gov). In the process of reducing such targets, Trx1 itself is oxidized and must be recycled: the flavoenzyme thioredoxin reductase (TXNRD1) uses NADPH to reduce the Trx1 disulfide back to dithiol, completing the thioredoxin system redox cycle (pmc.ncbi.nlm.nih.gov). This NADPH-dependent Trx1/TXNRD1 cycle provides reducing power to a wide range of cellular processes and complements the glutathione/glutaredoxin antioxidant system (pmc.ncbi.nlm.nih.gov). Unlike highly substrate-specific enzymes, thioredoxin-1 has broad substrate specificity, interacting with numerous proteins that form reversible disulfides. Key biochemical targets include Ribonucleotide Reductase (RNR) – Trx1 provides electrons to regenerate the active form of RNR during DNA precursor synthesis (www.mdpi.com) – and various metabolic enzymes and transcription factors that contain redox-sensitive cysteine residues (www.mdpi.com). In summary, Trx1’s primary biochemical function is to act as a general protein disulfide reductase, maintaining the intracellular environment in a reduced state and thereby protecting proteins from oxidative damage (pmc.ncbi.nlm.nih.gov).

Cellular Localization and Regulation

Under normal conditions, thioredoxin-1 is predominantly a cytosolic protein, but it is also found in the nucleus and can shuttle between these compartments in response to cellular signals (www.reactome.org). Trx1 lacks a classical secretion signal; however, it can be secreted via a leaderless secretory pathway (www.reactome.org). Experiments have shown that oxidative stress and certain stimuli induce nuclear translocation of Trx1. For instance, treatment with phorbol ester (PMA) or exposure to ionizing radiation causes Trx1 to move from the cytoplasm to the nucleus (www.reactome.org). In unstressed cells, Trx1 resides mostly in the cytoplasm, but upon stimuli like UV or gamma-irradiation, a significant fraction relocalizes to the nucleus (www.reactome.org). This stress-dependent nuclear accumulation is thought to facilitate repair of oxidatively damaged DNA and redox regulation of nuclear proteins. Intriguingly, a portion of Trx1 can also be exported outside the cell despite no signal peptide; secreted Trx1 has been detected in the extracellular milieu (www.reactome.org). Extracellular Trx1 may act in paracrine or autocrine signaling – historically, ADF/Trx was noted to augment IL-2 receptor (CD25) expression on T-cells (www.reactome.org), and more recent studies show secreted thioredoxin can modulate inflammation and cell–cell communication. The activity of Trx1 is tightly regulated by endogenous inhibitors. In particular, Thioredoxin-Interacting Protein (TXNIP) binds directly to Trx1 and blocks its active site cysteines (www.mdpi.com). TXNIP (also called “Vitamin D₃ Up-regulated Protein 1”) forms a mixed disulfide with Trx1’s catalytic cysteine, thereby inhibiting Trx1’s reductive activity (www.mdpi.com). This interaction is redox-sensitive: under oxidative conditions TXNIP more readily binds Trx1, serving as a sensor that dampens Trx1 activity when the cell is under reduced stress (www.mdpi.com). Through TXNIP and other post-translational modifications (for example, Trx1 can be phosphorylated or S-nitrosylated as discussed below), the cell finely modulates Trx1 activity to balance the redox state (www.mdpi.com) (www.mdpi.com).

Biological Functions and Pathways

Redox Homeostasis and Antioxidant Defense

Thioredoxin-1 is a central player in maintaining cellular redox homeostasis. By keeping proteins in their reduced form, Trx1 protects cells from oxidative stress. One critical pathway is the detoxification of reactive oxygen species (ROS). Trx1 directly reduces oxidized peroxiredoxins, which in turn convert hydrogen peroxide (H₂O₂) to water (pmc.ncbi.nlm.nih.gov). In this way, the Trx1 system is crucial for neutralizing peroxides and limiting ROS accumulation. Mice lacking components of the thioredoxin system suffer from elevated oxidative damage, highlighting Trx1’s antioxidant role (pmc.ncbi.nlm.nih.gov). Trx1 also helps regenerate other antioxidant enzymes and can reduce oxidized methionine sulfoxide reductases and protein disulfide isomerases, contributing to a broad anti-oxidative network. Notably, thioredoxin-1 and glutathione represent two major, complementary antioxidant systems in the cytosol (pmc.ncbi.nlm.nih.gov). Under stress conditions, increased expression or nuclear translocation of Trx1 is observed as a cytoprotective response (www.reactome.org). Nitric oxide (NO) signaling intersects with the Trx1 system as well. Trx1 can carry NO in the form of an S-nitrosothiol on specific cysteine residues (Cys69 or Cys73), and subsequently trans-nitrosylate target proteins (www.mdpi.com). This reversible S-nitrosylation capacity of Trx1 contributes to redox regulation beyond simple disulfide reduction. For example, Trx1 (when itself S-nitrosylated at Cys69) can transfer the NO group to caspase-3, thereby S-nitrosylating and inactivating caspase-3 (www.mdpi.com) (www.mdpi.com). This mechanism provides an additional antioxidant and anti-apoptotic defense: under high NO stress, Trx1 helps prevent excessive cell death by inhibiting caspase activation via S-nitrosylation (www.mdpi.com). In summary, Trx1 is a key antioxidant that not only scavenges ROS indirectly (through peroxiredoxin reduction) but also modulates reactive nitrogen species signals and preserves the redox state of critical cysteine proteins. These activities make Trx1 indispensable for resisting oxidative injury in cells.

DNA Synthesis and Cell Proliferation

A principal role of thioredoxin-1 is to support DNA synthesis and cell proliferation by supplying reducing equivalents to ribonucleotide reductase (RNR). RNR is the enzyme that converts ribonucleotides to deoxyribonucleotides (dNTPs), providing the building blocks for DNA replication. Thioredoxin was in fact first identified as the electron donor required for RNR activity (www.mdpi.com). In its catalytic cycle, RNR generates a disulfide in its R1 subunit (RRM1) that must be reduced for the enzyme to continue operating; Trx1 directly reduces this disulfide, thereby regenerating active RNR and enabling continued dNTP production (www.nature.com). This function is so critical that cells cannot proliferate without a functional thioredoxin system. Consistent with this, Trx1-null embryos cannot develop (www.mdpi.com), and conditional suppression of Trx1 leads to proliferation arrest due to dNTP depletion. Recent research (2024) has underscored the importance of Trx1 for RNR function: a genetic screen identified Trx1 as a key determinant of cancer cell sensitivity to replication stress, because Trx1 loss leads to deficient redox recycling of RNR and a drop in deoxynucleotide pools (www.nature.com). In that study, Trx1 impairment made tumor cells highly susceptible to DNA damage when checkpoint kinase 1 (CHK1) was inhibited, linking Trx1’s support of DNA synthesis to potential therapeutic strategies (www.nature.com). Beyond RNR, thioredoxin-1 also contributes to DNA repair and cell cycle control. In the nucleus, Trx1 may interact with DNA repair proteins (directly or via redox factor APE1) to facilitate the repair of oxidatively damaged DNA bases (www.reactome.org). Moreover, by regulating the activity of transcription factors (described next), Trx1 can influence the expression of genes involved in cell cycle progression and growth. Overall, Trx1 is vital for cell proliferation as it ensures a sufficient supply of dNTPs and protects genomic integrity during DNA replication.

Regulation of Transcription Factors and Gene Expression

Thioredoxin-1 has emerged as an important modulator of transcription factor activity, especially for factors that require reduced cysteine residues for DNA binding or activation. Trx1 can influence such factors both directly (through redox changes) and indirectly (through protein–protein interactions). A well-known example is the AP-1 transcription factor (a dimer of Fos/Jun). The DNA-binding domains of Fos and Jun contain redox-sensitive cysteines; changes in Trx1’s redox state can enhance AP-1 binding. Experimental studies showed that in cells exposed to ionizing radiation, oxidation/reduction cycling of Trx1 increases AP-1 (Fos/Jun) DNA-binding activity and boosts AP-1–driven gene expression (www.reactome.org). This redox effect on AP-1 is partly mediated by Trx1’s interaction with the Ref-1 (APE1) protein, a nucleus enzyme that directly reduces transcription factor cysteines. Trx1 keeps Ref-1 in a reduced, active state, enabling Ref-1 to promote DNA binding of AP-1 and other factors (www.reactome.org). NF-κB (a master regulator of inflammation) is another transcription factor regulated by the thioredoxin system. NF-κB’s p50 subunit requires a reduced cysteine (Cys62) for DNA binding, and oxidative stress can inactivate NF-κB by oxidizing this residue (www.mdpi.com). Thioredoxin-1 helps maintain the nuclear environment in a reducing state; by facilitating the reduction of p50’s critical cysteine (likely via Ref-1 or direct reduction), Trx1 ensures NF-κB remains DNA-binding competent in the nucleus (www.mdpi.com). Through such mechanisms, Trx1 can potentiate the transcription of cytokine genes and other stress-response genes when cells are under oxidative challenge. Additionally, Trx1 has been reported to interact with and modulate other transcriptional regulators. For instance, Trx1 can bind to and reduce oxidized p53 tumor suppressor, potentially affecting p53’s activity under oxidative stress (p53 contains redox-sensitive cysteines in its DNA-binding domain). Trx1 also regulates the HIF-1α (hypoxia-inducible factor) pathway indirectly by controlling cellular redox and the stability of HIF-1α (through prolyl hydroxylase influences). In summary, thioredoxin-1 acts as a redox switch for multiple transcription factors, enabling or enhancing their DNA-binding and transcriptional activity under appropriate (reducing) conditions. This places Trx1 upstream of many gene expression programs, including those for cell growth, inflammatory responses, and stress adaptation (www.mdpi.com).

Apoptosis and Cell Survival Signaling

A crucial aspect of Trx1’s function is its role in regulating apoptosis (programmed cell death) and stress signaling pathways. Generally, Trx1 exerts an anti-apoptotic effect, helping cells survive under stress by modulating key signaling proteins. One of the best-characterized interactions is between Trx1 and ASK1 (Apoptosis Signal-Regulating Kinase 1), a MAP3K that triggers cell death pathways (through JNK/p38 MAP kinases) in response to stress. In healthy conditions, reduced Trx1 binds directly to ASK1 and keeps it in an inhibited state (pubmed.ncbi.nlm.nih.gov). Trx1 interacts with the N-terminal regulatory region of ASK1, preventing ASK1 activation. However, under oxidative stress or certain death stimuli (e.g. TNF-α signaling), Trx1 itself becomes oxidized (forming a disulfide between Cys32–Cys35), which causes Trx1 to dissociate from ASK1 (pubmed.ncbi.nlm.nih.gov). The loss of Trx1 binding permits ASK1 to form active oligomers and initiate the JNK/p38 cascade, leading to apoptosis (pubmed.ncbi.nlm.nih.gov). In essence, Trx1 acts as a redox-sensitive brake on a major apoptosis pathway: when Trx1 is reduced, it holds ASK1 inactive, and when Trx1 is oxidized, the brake is released and cell death signaling proceeds. This mechanism is supported by structural studies showing that Trx1 binding to ASK1 masks critical interfaces needed for ASK1 oligomerization (elifesciences.org). Besides ASK1, thioredoxin-1 influences apoptosis through direct chemical modification of caspases. As described earlier, Trx1 can trans-nitrosylate procaspase-3 and caspase-3 on their active-site cysteine, which inhibits caspase activation and activity (www.mdpi.com). By S-nitrosylating caspase-3 (and reportedly caspase-9 in some studies), Trx1 prevents the execution of apoptosis, especially under conditions of nitrosative stress. Trx1’s anti-apoptotic role is also evident in its effect on mitochondrial integrity: although Trx1 is mostly cytosolic, it can influence the Bcl-2/Bax family balance indirectly via redox signaling, and a mitochondrial isoform (Trx2) directly affects mitochondria-mediated death pathways. Cells with high Trx1 activity tend to resist apoptosis induced by oxidative insults, whereas Trx1 inhibition or depletion makes cells more prone to undergo programmed death. This is one reason why cancer cells often upregulate Trx1 – to attain greater resistance against oxidative stress and pro-apoptotic signals. Indeed, experimental Trx1 inhibitors trigger cancer cell apoptosis by lifting this redox safety net (more on this in the clinical significance section). Overall, through both protein–protein interactions (e.g. Trx1–ASK1) and redox modifications of apoptosis enzymes (caspases), thioredoxin-1 is a pivotal regulator of cell survival during stress.

Immune Function and Extracellular Role

While thioredoxin-1 primarily functions inside cells, it also has notable extracellular and immunomodulatory roles. Trx1 can be secreted from cells (via an atypical secretion pathway) and has been detected in blood and extracellular fluids (www.reactome.org). Extracellular Trx1 can act as a cytokine or chemokine-like factor. The historical example of ADF activity illustrates this: Trx1 added to T-cell cultures enhanced the expression of the IL-2 receptor (CD25), thereby promoting T-cell responsiveness to IL-2 (www.reactome.org). Trx1 has also been reported to chemoattract neutrophils and to suppress HIV-1 virus replication in lymphocytes, suggesting diverse immune impacts (Trx1 can bind or modify extracellular proteins and receptors via its thiol-disulfide exchange activity). In inflammation, secreted Trx1 may protect tissues from excessive damage – for instance, it can reduce oxidized extracellular proteins or neutralize extracellular ROS. Clinical studies have found that blood levels of thioredoxin increase during inflammatory exacerbations: patients in severe asthma attacks or sepsis have significantly elevated serum Trx1 levels compared to healthy controls (pmc.ncbi.nlm.nih.gov). This likely reflects an adaptive response, where stressed tissues release Trx1 to bolster antioxidant defenses or modulate immune cells. Notably, Trx1 is considered an allergen in some contexts; e.g. human Trx1 can bind IgE in patients with atopic dermatitis who are sensitized to a yeast thioredoxin, suggesting cross-reactivity of immune responses (www.reactome.org). On cell surfaces, Trx1 has been found associated with membrane proteins, sometimes termed a “surface-associated sulfhydryl protein” that might reduce disulfide bonds in extracellular portions of receptors or adhesion molecules (though these functions are less well-characterized). In summary, beyond its intracellular roles, thioredoxin-1 also participates in intercellular signaling and immune regulation. By being secreted and acting on other cells, Trx1 can influence immune responses, inflammation, and possibly pathogen defense, extending its functional reach to the extracellular environment.

Current Research and Developments (2023–2024)

Given thioredoxin-1’s central importance, it remains an active area of research. Recent studies (2023–2024) have provided new insights into Trx1’s functions and potential applications:

  • Link to Replication Stress and Cancer Therapy: A 2024 study in Nature Communications identified Trx1 as a key factor in how cancer cells cope with replication stress (www.nature.com). Using high-throughput genetic screens, researchers found that Trx1 loss made lung cancer cells much more sensitive to CHK1 inhibitors (drugs that induce replication stress) (www.nature.com). Mechanistically, the absence of Trx1 led to failure in recycling RNR’s active site and a subsequent depletion of dNTPs, exaggerating DNA damage in replicating cells (www.nature.com). This finding underscores Trx1’s role in DNA synthesis and suggests that inhibiting Trx1 could potentiate certain cancer therapies by crippling tumor DNA replication. It highlights a current trend of targeting redox vulnerabilities in cancer – the thioredoxin system being a prime candidate.

  • Structural Biology Advances: In 2023, cryo-EM studies shed light on the Trx1–ASK1 interaction. A preprint in eLife reported the structure of the ASK1 kinase and how Trx1 binding produces allosteric changes that prevent ASK1 activation (elifesciences.org). These structural insights confirm the model of redox-regulation of ASK1 and may guide the design of peptides or mimetics that modulate the Trx1–ASK1 interface for therapeutic benefit. Understanding the precise binding mechanism (Trx1 likely blocks ASK1 dimerization interfaces) is a notable development for drug discovery in apoptosis-related diseases.

  • Thioredoxin and Aging: There is growing evidence that the thioredoxin system influences longevity and aging-related diseases. A 2023 review in Antioxidants (Basel) highlighted that thioredoxin and thioredoxin reductase are evolutionarily conserved longevity determinants (pmc.ncbi.nlm.nih.gov). In model organisms, enhancing thioredoxin expression can extend lifespan under certain conditions, presumably by mitigating age-associated oxidative damage. Mouse studies show only modest lifespan extension with Trx1 overexpression (pmc.ncbi.nlm.nih.gov), but they confirm that oxidative stress resistance is improved. Ongoing 2023 research is examining Trx1’s role in age-related pathologies (e.g. neurodegeneration and cardiovascular diseases) and whether boosting the Trx system can ameliorate such conditions (www.mdpi.com). Conversely, chronic high Trx1 activity may have trade-offs (e.g. possibly higher cancer incidence in aged Trx1 transgenic mice (pmc.ncbi.nlm.nih.gov)), so current research is dissecting these complex effects.

  • Post-translational Modifications and Regulation: Cutting-edge studies are also exploring how Trx1 is regulated by modifications. For instance, research in 2023 has detailed how S-nitrosylation at specific cysteine residues (Cys69, Cys73) alters Trx1’s structure and function (www.mdpi.com). One report showed that Cys69 S-nitrosylation is required for Trx1 to trans-nitrosylate caspase-3 (www.mdpi.com), revealing a finely tuned mechanism of signal transduction via Trx1. Other work is mapping Trx1 phosphorylation sites (e.g. Thr100) and acetylation, which may affect its interaction with binding partners or its subcellular localization (www.mdpi.com). These studies use advanced proteomics and imaging to understand Trx1 regulation in real time within living cells (an example being real-time redox sensors that track Trx1 oxidation state). Such 2023 advancements provide a richer picture of Trx1’s regulation in physiological vs. stress conditions.

  • Biotechnological and Diagnostic Developments: Thioredoxin’s unique properties are being harnessed in biotechnology. For example, engineered Trx1 fusions are used to enhance the folding of disulfide-containing proteins in E. coli expression systems. In diagnostics, new assays to measure Trx1 redox state are under development, aiming to use the ratio of oxidized to reduced Trx1 as a sensitive indicator of cellular oxidative stress (pmc.ncbi.nlm.nih.gov). Researchers in 2023 have also investigated serum Trx1 as a biomarker for diseases like stroke and cancer. A 2023 clinical study found correlations between high serum Trx1 and worse outcomes in ischemic stroke patients (pubmed.ncbi.nlm.nih.gov), aligning with earlier reports of Trx1 as a general stress marker. Overall, current research is expanding both our fundamental understanding of Trx1 and its practical applications in medicine and technology.

Clinical Significance and Applications

Thioredoxin-1’s pivotal role in cell survival and proliferation makes it highly relevant in various diseases, especially cancer and chronic inflammatory conditions. Many tumors show elevated Trx1 expression, which is often associated with more aggressive growth and therapy resistance (pmc.ncbi.nlm.nih.gov). Cancer cells benefit from high Trx1 levels to combat the elevated oxidative stress of the tumor microenvironment and to support rapid DNA synthesis. Clinically, high Trx1 levels have been correlated with poor prognosis in certain cancers (www.mdpi.com). Moreover, Trx1 is actively secreted by tumor cells and can be detected in the blood; one study found that cancer patients had on average ~182 ng/mL of Trx1 in plasma versus ~27 ng/mL in healthy individuals (a seven-fold increase) (pmc.ncbi.nlm.nih.gov). Trx1 may also promote tumor angiogenesis by increasing the activity of VEGF (vascular endothelial growth factor) – indeed, Trx1 can upregulate HIF-1 targets under some conditions, indirectly boosting VEGF production. These insights have driven efforts to target the thioredoxin system in cancer therapy. Small-molecule inhibitors of Trx1 or TrxR are being explored as anti-cancer agents. One example is PX-12 (1-methylpropyl-2-imidazolyl disulfide), an irreversible Trx1 inhibitor that was tested in phase I clinical trials (pmc.ncbi.nlm.nih.gov). PX-12 was shown to lower tumor intracellular Trx1 levels and even reduced circulating Trx1 and VEGF concentrations in patients, demonstrating on-target activity (pmc.ncbi.nlm.nih.gov). Although PX-12’s clinical development encountered challenges (toxicity and limited efficacy as a single agent), this line of therapy remains of interest, and improved Trx1/TXNRD inhibitors (including analogues and redox-active gold compounds like auranofin) are under investigation. The rationale is that blocking Trx1 forces cancer cells into oxidative distress and apoptosis, or sensitizes them to chemo/radiotherapy that induces ROS. Recent preclinical findings support combining Trx system inhibitors with DNA-damaging treatments to achieve synergistic cancer cell kill (www.mdpi.com).

Aside from cancer, thioredoxin-1 has implications in other diseases. In diseases with excessive inflammation or autoimmunity, such as rheumatoid arthritis, systemic lupus, or severe asthma, Trx1 levels are often found elevated, likely as a countermeasure to inflammation-induced oxidative stress (pmc.ncbi.nlm.nih.gov). In sepsis and acute lung injury, patients can have dramatically higher plasma Trx1, and these levels have been proposed as a biomarker for disease severity (pmc.ncbi.nlm.nih.gov). For example, measuring serum Trx1 might help gauge the oxidative stress burden in critical illness or predict outcomes (some studies in sepsis suggest higher Trx1 portends greater organ failure) (pmc.ncbi.nlm.nih.gov). In metabolic diseases like diabetes, Trx1’s role intersects with redox-sensitive signaling; high glucose can induce TXNIP, which then inhibits Trx1 and contributes to oxidative damage in tissues – a pathway under study for diabetic complications. There is also interest in thioredoxin as a therapeutic protein: recombinant human thioredoxin-1 has been tested in models of cardiac ischemia and neurodegeneration, where delivering extra Trx1 can protect tissues from ischemic or oxidative injury. However, translating this to clinics is complex due to Trx1’s pleiotropic effects and short half-life in circulation.

From an expert perspective, there is a consensus that proper regulation of the Trx1 system is crucial for health, and its dysregulation is a common thread in many pathologies (www.mdpi.com) (www.mdpi.com). As one recent review summarizes, alterations in Trx1 activity or expression can tip the balance from normal physiology to disease states such as cancer, neurodegenerative disorders, or cardiovascular disease (www.mdpi.com). On the positive side, bolstering Trx1-mediated defenses is seen as beneficial against aging and degenerative diseases, whereas dampening an overactive Trx1 (as in tumors) is a promising treatment strategy. Clinical trials are ongoing to better define Trx1’s utility as a biomarker and to test Trx system modulators in diseases. Notably, thioredoxin-1 itself has been proposed as a drug target, antioxidant therapy, and disease marker all in one (pmc.ncbi.nlm.nih.gov), reflecting its multifaceted importance.

Conclusion

In summary, the human TXN gene encodes thioredoxin-1, a master regulator of cellular redox balance and a facilitator of many vital processes. Trx1’s primary function is to reduce disulfide bonds in proteins, using its Cys-Gly-Pro-Cys active site to keep other proteins (enzymes, transcription factors, signaling molecules) in their functional reduced states. Through this activity, Trx1 supports DNA synthesis, defends against oxidative stress, and governs signals for cell growth and survival. It operates in the cytosol, shuttles to the nucleus under stress, and even acts outside the cell in certain contexts. Biologically, thioredoxin-1 is indispensable – it is required for embryonic development and for the survival of virtually all cell types (www.mdpi.com). Its influence extends from controlling the cell’s redox environment and metabolic flux to fine-tuning the immune response and apoptosis. Recent research continues to unveil new dimensions of Trx1’s role, from aging to cancer therapy, reinforcing that Trx1 sits at a nexus of redox-regulated pathways. As a result, thioredoxin-1 is not only a fundamental biochemical catalyst but also a potential therapeutic pivot: scientists and clinicians are leveraging knowledge about Trx1 to develop redox-based interventions and to use Trx1 levels as an indicator of disease states. In the words of experts, thioredoxin-1 is a multitasking protein crucial for maintaining cellular homeostasis (www.mdpi.com) (www.mdpi.com). Ongoing studies and clinical efforts aimed at the thioredoxin system hold promise for novel antioxidant therapies and for improving outcomes in diseases where redox imbalance is a key player. The current understanding of TXN/Trx1, grounded in decades of research and bolstered by the latest findings, underscores its role as a linchpin of cellular function and a continuing focus in biomedical science.

References: (Key sources referenced by publication date)

  • Holmgren, A. et al. (1964). Discovery of E. coli Thioredoxin as RNR Electron Donor. J. Biol. Chem. (identified in (www.mdpi.com)).
  • Tagaya, Y. et al. (1989). Identification of ADF (Human Thioredoxin) as IL-2 Receptor-Inducing Factor. EMBO J. (referenced in (www.mdpi.com)).
  • Matsui, M. et al. (1996). Targeted Disruption of Mouse Thioredoxin-1 Causes Embryonic Lethality. Dev. Biol. (see (www.mdpi.com)).
  • Haendeler, J. et al. (2002). Anti-apoptotic Function of Trx1 via S-Nitrosylation of Caspase-3 (Cys69 role). Nat. Cell Biol. 4:743-749 (described in (www.mdpi.com) (www.mdpi.com)).
  • Hirota, K. et al. (1999). Thioredoxin Stimulates AP-1 DNA Binding and Ref-1 Function under Oxidative Stress. Biochem J. 342: 481–486 (related to (www.reactome.org) (www.reactome.org)).
  • Liu, Y. et al. (2002). Trx1 Binds ASK1 and Inhibits Apoptosis Signal Kinase; Oxidation of Trx1 Releases ASK1. J. Biol. Chem. 277: 25956-25960 (summarized in (pubmed.ncbi.nlm.nih.gov)).
  • Powis, G. et al. (2006). PX-12 Thioredoxin-1 Inhibitor in Cancer: Decreases Trx1/VEGF in Patients. Invest New Drugs 24(3):189-199 (patient data in (pmc.ncbi.nlm.nih.gov)).
  • Alokda, A. & Van Raamsdonk, J. (2023). Thioredoxin Systems and Longevity. Antioxidants (Basel) 12(4):944 (pmc.ncbi.nlm.nih.gov) (pmc.ncbi.nlm.nih.gov).
  • Oberacker, T. et al. (2023). The Importance of Thioredoxin-1 in Health and Disease (Review). Antioxidants (Basel) 12(5):1078 (www.mdpi.com) (www.mdpi.com).
  • Narayanan, D. et al. (2024). Thioredoxin-1 Loss Sensitizes Cancer Cells to CHK1 Inhibition via RNR Redox Dysregulation. Nature Comm. 15:48076 (www.nature.com).

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  98. AnnotationURLCitation(end_index=42659, start_index=42532, title='The Importance of Thioredoxin-1 in Health and Disease | MDPI', type='url_citation', url='https://www.mdpi.com/2076-3921/12/5/1078#:~:text=Trx,as%20neurodegenerative%20and%20cardiovascular%20diseases')
  99. AnnotationURLCitation(end_index=42782, start_index=42660, title='The Importance of Thioredoxin-1 in Health and Disease | MDPI', type='url_citation', url='https://www.mdpi.com/2076-3921/12/5/1078#:~:text=Thioredoxin,a%20transition%20from%20the%20physiological')
  100. AnnotationURLCitation(end_index=43110, start_index=42938, title='The thioredoxin system determines CHK1 inhibitor sensitivity via redox-mediated regulation of ribonucleotide reductase activity | Nature Communications', type='url_citation', url='https://www.nature.com/articles/s41467-024-48076-9#:~:text=strategies%20that%20can%20overcome%20these,mediated%20CHK1i%20sensitivity.%20Further%2C%20the')

📄 View Raw YAML

id: P10599
gene_symbol: TXN
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: Thioredoxin-1 (Trx1) is a small (~12 kDa) ubiquitous oxidoreductase
  that plays a central role in cellular redox homeostasis. The protein contains 
  the conserved active site motif CGPC (Cys32-Gly-Pro-Cys35) within a canonical 
  thioredoxin fold, enabling it to catalyze dithiol-disulfide exchange 
  reactions. The catalytic mechanism involves nucleophilic attack by Cys32 on 
  substrate disulfide bonds, forming a mixed disulfide intermediate that is 
  resolved by Cys35, releasing the reduced substrate while forming an 
  intramolecular disulfide in Trx1. The oxidized Trx1 is regenerated by 
  thioredoxin reductase (TrxR1) using NADPH. Major physiological substrates 
  include peroxiredoxins (for H2O2 detoxification), ribonucleotide reductase 
  (for deoxyribonucleotide synthesis), and oxidized protein tyrosine 
  phosphatases. Beyond its catalytic function, Trx1 regulates transcription 
  factors including AP-1 and NF-kB via interaction with APE1/Ref-1, and 
  modulates apoptosis by binding ASK1 in its reduced state. Trx1 also serves as 
  a nitrosothiol carrier, with Cys73 capable of S-nitrosylation and 
  transnitrosation of target proteins like caspase-3. The protein is 
  predominantly cytosolic but translocates to the nucleus upon cellular stress, 
  and is also secreted via a leaderless pathway where it exhibits cytokine-like 
  properties and can modulate cell surface receptors like CD30.
existing_annotations:
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: IEA annotation based on UniProt subcellular location. Thioredoxin 
      is secreted via a leaderless secretory pathway and has documented 
      extracellular functions [PMID:1332947].
    action: ACCEPT
    reason: This annotation is well-supported by experimental evidence showing 
      Trx1 secretion. PMID:1332947 demonstrated that thioredoxin is actively 
      secreted by various cell types through a non-classical secretory pathway.
    supported_by:
    - reference_id: PMID:1332947
      supporting_text: Thioredoxin, despite its function as an intracellular 
        disulfide reducing enzyme and its lack of a signal sequence, has been 
        found to play some roles extracellularly. Here we show that thioredoxin 
        is actively secreted by a variety of normal and transformed cells
    - reference_id: file:human/TXN/TXN-deep-research-falcon.md
      supporting_text: See deep research file for comprehensive analysis
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: IEA annotation supported by experimental evidence showing nuclear 
      translocation of Trx1 in response to cellular stress [PMID:9108029, 
      PMID:11118054].
    action: ACCEPT
    reason: Nuclear localization is well-established. Trx1 translocates to the 
      nucleus where it interacts with Ref-1/APE1 to regulate AP-1 transcription 
      factor activity.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: Phorbol 12-myristate 13 acetate efficiently translocated 
        TRX into the HeLa cell nucleus where Ref-1 preexists.
    - reference_id: PMID:11118054
      supporting_text: After exposure to IR, nuclear levels of immunoreactive 
        TRX increased, accompanied by an increase in AP-1 DNA binding activity.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: IEA annotation consistent with Trx1 being predominantly cytoplasmic
      [PMID:9108029, PMID:11118054].
    action: ACCEPT
    reason: Cytoplasmic localization is the primary location for Trx1 in 
      unstressed cells, where it performs its major redox functions.
    supported_by:
    - reference_id: PMID:11118054
      supporting_text: Thioredoxin (TRX) is a cytoplasmic, redox-sensitive 
        signaling factor believed to participate in the regulation of nuclear 
        transcription factors mediating cellular responses to environmental 
        stress.
- term:
    id: GO:0006351
    label: DNA-templated transcription
  evidence_type: IEA
  original_reference_id: GO_REF:0000043
  review:
    summary: IEA annotation based on UniProt keyword mapping. Trx1 does not 
      directly participate in transcription but regulates transcription factor 
      DNA-binding activity.
    action: MODIFY
    reason: This term is too direct - Trx1 does not function as a transcription 
      factor or directly in the transcription machinery. Instead, it regulates 
      transcription factor activity through redox mechanisms. A more appropriate
      term would be GO:0043388 (positive regulation of DNA binding) or 
      GO:0006357 (regulation of transcription by RNA polymerase II).
    proposed_replacement_terms:
    - id: GO:0043388
      label: positive regulation of DNA binding
- term:
    id: GO:0015035
    label: protein-disulfide reductase activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  review:
    summary: IEA annotation for the core molecular function of thioredoxin. This
      is the primary enzymatic activity of Trx1.
    action: ACCEPT
    reason: This is the defining enzymatic activity of thioredoxin - reducing 
      disulfide bonds in target proteins via its CGPC active site. 
      Well-established by multiple experimental studies.
    supported_by:
    - reference_id: PMID:2176490
      supporting_text: HTR was as efficient as E. coli or plant and algal 
        thioredoxins when assayed with E. coli ribonucleotide reductase or for 
        the reduction of insulin.
- term:
    id: GO:0019725
    label: cellular homeostasis
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  review:
    summary: IEA annotation that is overly general. Trx1 specifically maintains 
      cellular redox homeostasis.
    action: MODIFY
    reason: While Trx1 does contribute to cellular homeostasis, the more 
      specific and accurate term is GO:0045454 (cell redox homeostasis), which 
      precisely describes the function of the thioredoxin system.
    proposed_replacement_terms:
    - id: GO:0045454
      label: cell redox homeostasis
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:10814541
  review:
    summary: This study identified VDUP1/TXNIP as a thioredoxin-binding protein 
      using yeast two-hybrid screening in HeLa cells [PMID:10814541].
    action: MODIFY
    reason: The generic protein binding term should be replaced with a more 
      specific term. TXNIP is a physiologically important negative regulator of 
      Trx1 that binds through the redox-active site cysteines.
    proposed_replacement_terms:
    - id: GO:0097110
      label: scaffold protein binding
    supported_by:
    - reference_id: PMID:10814541
      supporting_text: Loss of interaction between VDUP1 and hTrx was observed 
        either when two cysteines (Cys 32 and 35) in hTrx were substituted by 
        serines
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:15480426
  review:
    summary: This study demonstrated direct interaction between Trx and Jab1 
      (COPS5), showing that Trx negatively regulates Jab1-controlled signaling 
      pathways [PMID:15480426].
    action: ACCEPT
    reason: While protein binding is generic, this represents a specific 
      functional interaction where Trx modulates AP-1 activity and p27Kip1 
      degradation through Jab1 binding. The interaction is validated by FRET and
      co-immunoprecipitation.
    supported_by:
    - reference_id: PMID:15480426
      supporting_text: Fluorescence resonance energy transfer and 
        co-immunoprecipitation studies revealed that Trx and Jab1 colocalize and
        directly interact with each other.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:15657067
  review:
    summary: High-throughput proteomics study identifying TXN in phosphotyrosine
      signaling networks.
    action: KEEP_AS_NON_CORE
    reason: This is from a large-scale proteomics study without specific 
      mechanistic validation for Trx1. The interaction may be indirect or 
      represent a broader signaling network context rather than a direct 
      functional interaction.
    supported_by:
    - reference_id: PMID:15657067
      supporting_text: Epub 2005 Jan 17. Phosphotyrosine signaling networks in 
        epidermal growth factor receptor overexpressing squamous carcinoma 
        cells.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:17353931
  review:
    summary: Large-scale protein-protein interaction mapping study by mass 
      spectrometry.
    action: KEEP_AS_NON_CORE
    reason: High-throughput study without specific mechanistic validation. 
      Protein binding is too generic for annotation purposes without functional 
      context.
    supported_by:
    - reference_id: PMID:17353931
      supporting_text: Large-scale mapping of human protein-protein interactions
        by mass spectrometry.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:17557078
  review:
    summary: This study identified CD30 (TNFRSF8) as a specific extracellular 
      target of Trx1 through kinetic trapping and demonstrated functional 
      regulation of CD30 signaling [PMID:17557078].
    action: ACCEPT
    reason: This represents a well-characterized, specific protein-protein 
      interaction with functional consequences. Trx1 catalytically interacts 
      with CD30 on the cell surface to regulate receptor-ligand interactions.
    supported_by:
    - reference_id: PMID:17557078
      supporting_text: Using a mechanism-based kinetic trapping technique to 
        identify disulfide exchange interactions on the intact surface of living
        lymphocytes, we found that Trx1 catalytically interacts with a single 
        principal target protein. This target protein was identified as the 
        tumor necrosis factor receptor superfamily member 8 (TNFRSF8/CD30).
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:17606900
  review:
    summary: This study demonstrated specific transnitrosation between Trx1 and 
      procaspase-3, showing Trx participation in anti-apoptotic signaling 
      [PMID:17606900].
    action: MODIFY
    reason: This represents a specific functional interaction where Trx1 
      transfers nitrosyl groups to caspase-3, inhibiting apoptosis. A more 
      specific term describing this regulatory interaction would be appropriate.
    proposed_replacement_terms:
    - id: GO:0051401
      label: cysteine-type endopeptidase inhibitor activity
    supported_by:
    - reference_id: PMID:17606900
      supporting_text: Here we show that a specific transnitrosation reaction 
        between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T 
        cells and prevents apoptosis.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19690162
  review:
    summary: This study identified Trx1 as a target of Salmonella effector SlrP,
      which acts as an E3 ubiquitin ligase for thioredoxin [PMID:19690162].
    action: ACCEPT
    reason: While this represents a pathogen-host interaction rather than normal
      physiology, the interaction is specific and has been validated by multiple
      methods including coimmunoprecipitation.
    supported_by:
    - reference_id: PMID:19690162
      supporting_text: Using a genetic screen, we identified the small, 
        reduction/oxidation-regulatory protein thioredoxin as a mammalian 
        binding partner of the Salmonella effector SlrP. The interaction was 
        confirmed by affinity chromatography and coimmunoprecipitation.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19805025
  review:
    summary: This study focused on CIB1-ASK1 interaction rather than direct 
      Trx-protein binding.
    action: KEEP_AS_NON_CORE
    reason: The paper's main focus is on CIB1 as a modulator of ASK1 signaling. 
      While Trx1 is mentioned in the context of ASK1 regulation, the specific 
      protein binding evidence for Trx1 is indirect in this study.
    supported_by:
    - reference_id: PMID:19805025
      supporting_text: CIB1 functions as a Ca(2+)-sensitive modulator of 
        stress-induced signaling by targeting ASK1.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:20029029
  review:
    summary: Study on HDAC6 regulation of EGFR trafficking.
    action: UNDECIDED
    reason: Unable to verify the specific Trx1 protein binding context in this 
      study without access to the full publication.
    supported_by:
    - reference_id: PMID:20029029
      supporting_text: Regulation of epidermal growth factor receptor 
        trafficking by lysine deacetylase HDAC6.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21145461
  review:
    summary: Large-scale quantitative proteomics study on cullin-RING ubiquitin 
      ligase networks [PMID:21145461].
    action: KEEP_AS_NON_CORE
    reason: This is a high-throughput proteomics study focused on CRL network 
      dynamics. Any Trx1 interactions identified would be incidental to the main
      focus and lack specific mechanistic validation.
    supported_by:
    - reference_id: PMID:21145461
      supporting_text: Here, we report the development of a quantitative 
        proteomics platform centered on multiplex absolute quantification (AQUA)
        technology to elucidate the architecture of the cullin-RING ubiquitin 
        ligase (CRL) network
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21771788
  review:
    summary: This study focuses on ZPR9 as a positive regulator of ASK1 and 
      mentions Trx as a negative regulator that competes with ZPR9 
      [PMID:21771788].
    action: ACCEPT
    reason: The study validates the Trx-ASK1 interaction in the context of 
      understanding ASK1 regulation, showing that ZPR9 destabilizes the Trx-ASK1
      complex.
    supported_by:
    - reference_id: PMID:21771788
      supporting_text: Ectopic expression of wild-type ZPR9, but not an 
        S314A/T318A mutant, stimulated ASK1 kinase activity and positively 
        regulated ASK1-mediated signaling to both JNK and p38 kinases by 
        destabilizing complex formation between ASK1 and its negative 
        regulators, Trx and 14-3-3
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21988832
  review:
    summary: Protein interaction network study of human liver.
    action: KEEP_AS_NON_CORE
    reason: High-throughput interactome study without specific mechanistic 
      validation for Trx1 interactions.
    supported_by:
    - reference_id: PMID:21988832
      supporting_text: Toward an understanding of the protein interaction 
        network of the human liver.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:24658140
  review:
    summary: Mammalian membrane two-hybrid assay study.
    action: UNDECIDED
    reason: Unable to verify the specific Trx1 interaction context without 
      access to the full publication.
    supported_by:
    - reference_id: PMID:24658140
      supporting_text: The mammalian-membrane two-hybrid assay (MaMTH) for 
        probing membrane-protein interactions in human cells.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:24976139
  review:
    summary: This study demonstrated that Trx1 reactivates oxidized PTP1B and 
      PTEN phosphatases through direct thiol-disulfide exchange [PMID:24976139].
    action: ACCEPT
    reason: This represents a mechanistically validated interaction where Trx1 
      reduces oxidized phosphatases, returning them to their active state. The 
      interaction was confirmed by kinetic trapping.
    supported_by:
    - reference_id: PMID:24976139
      supporting_text: Finally, using a mechanism-based trapping approach, we 
        demonstrate direct thiol disulphide exchange between the active sites of
        thioredoxin and either phosphatase.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25402766
  review:
    summary: This study describes a Prx2-STAT3 redox relay but validates that 
      Trx1 is the physiological reductant of Prx2 [PMID:25402766].
    action: ACCEPT
    reason: The study confirms the Trx1-Prx2 interaction as part of the cellular
      redox signaling system. Prx2 is a well-established Trx1 substrate.
    supported_by:
    - reference_id: PMID:25402766
      supporting_text: Prx2 forms a redox relay with the transcription factor 
        STAT3 in which oxidative equivalents flow from Prx2 to STAT3.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:28514442
  review:
    summary: Large-scale human interactome mapping study.
    action: KEEP_AS_NON_CORE
    reason: High-throughput interactome study. Protein binding annotations from 
      such studies require additional validation for functional significance.
    supported_by:
    - reference_id: PMID:28514442
      supporting_text: Architecture of the human interactome defines protein 
        communities and disease networks.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:31980649
  review:
    summary: Study on EGFR network rewiring in colorectal cancer cells.
    action: UNDECIDED
    reason: Unable to verify the specific Trx1 protein binding context without 
      access to the full publication.
    supported_by:
    - reference_id: PMID:31980649
      supporting_text: Extensive rewiring of the EGFR network in colorectal 
        cancer cells expressing transforming levels of KRAS(G13D).
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  review:
    summary: Reference map of human binary protein interactome.
    action: KEEP_AS_NON_CORE
    reason: High-throughput binary interactome study. Requires additional 
      validation for specific Trx1 interactions.
    supported_by:
    - reference_id: PMID:32296183
      supporting_text: Apr 8. A reference map of the human binary protein 
        interactome.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32814053
  review:
    summary: Interactome mapping study on neurodegenerative disease proteins.
    action: UNDECIDED
    reason: Unable to verify the specific Trx1 interaction context without 
      access to the full publication.
    supported_by:
    - reference_id: PMID:32814053
      supporting_text: Interactome Mapping Provides a Network of 
        Neurodegenerative Disease Proteins and Uncovers Widespread Protein 
        Aggregation in Affected Brains.
- term:
    id: GO:0005654
    label: nucleoplasm
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  review:
    summary: IDA annotation based on immunofluorescence data showing nucleoplasm
      localization.
    action: ACCEPT
    reason: Consistent with nuclear translocation of Trx1 upon cellular stress 
      as demonstrated in multiple studies [PMID:9108029, PMID:11118054].
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  review:
    summary: IDA annotation based on immunofluorescence data showing cytosolic 
      localization.
    action: ACCEPT
    reason: The cytosol is the primary location for Trx1 in unstressed cells, 
      consistent with its function in maintaining cytosolic protein redox state.
- term:
    id: GO:0004791
    label: thioredoxin-disulfide reductase (NADPH) activity
  evidence_type: TAS
  original_reference_id: Reactome:R-NUL-9617742
  review:
    summary: Reactome annotation. Note that this GO term describes the activity 
      of thioredoxin reductase, not thioredoxin itself.
    action: REMOVE
    reason: This is incorrect - GO:0004791 describes the activity of thioredoxin
      reductase (TrxR), which reduces oxidized thioredoxin using NADPH. 
      Thioredoxin itself does not have this activity; it is the substrate of 
      this reaction, not the enzyme. The correct term for thioredoxin is 
      GO:0015035 (protein-disulfide reductase activity).
- term:
    id: GO:0051897
    label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B
      signal transduction
  evidence_type: IMP
  original_reference_id: PMID:22492997
  review:
    summary: This study shows that DJ-1 induces Trx1 expression through Nrf2, 
      and Trx1 is required for DJ-1-dependent AKT activation in response to H2O2
      [PMID:22492997].
    action: ACCEPT
    reason: The study demonstrates that Trx1 knockdown abrogates DJ-1-dependent,
      H2O2-induced AKT activation, supporting a role in PI3K/AKT signaling 
      regulation.
    supported_by:
    - reference_id: PMID:22492997
      supporting_text: Additionally, knockdown of Trx1 significantly abrogates 
        DJ-1-dependent, hydrogen peroxide-induced activation of the pro-survival
        factor AKT.
- term:
    id: GO:0061692
    label: cellular detoxification of hydrogen peroxide
  evidence_type: IGI
  original_reference_id: PMID:22492997
  review:
    summary: The study shows that Trx1 is induced by DJ-1 and provides 
      cytoprotection against H2O2 [PMID:22492997].
    action: ACCEPT
    reason: Trx1 functions in H2O2 detoxification by reducing peroxiredoxins, 
      which directly detoxify H2O2. This is a core function of the thioredoxin 
      system.
    supported_by:
    - reference_id: PMID:22492997
      supporting_text: Further, Nrf2 knockdown abolishes DJ-1-mediated Trx1 
        induction and cytoprotection against hydrogen peroxide
- term:
    id: GO:0005654
    label: nucleoplasm
  evidence_type: TAS
  original_reference_id: Reactome:R-NUL-9617742
  review:
    summary: Reactome TAS annotation for nucleoplasm localization.
    action: ACCEPT
    reason: Consistent with documented nuclear translocation of Trx1.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-111751
  review:
    summary: Reactome annotation for Trx1 participation in ribonucleotide 
      reductase reaction.
    action: ACCEPT
    reason: Trx1 is a well-established electron donor for ribonucleotide 
      reductase in the cytosol, supporting deoxyribonucleotide synthesis.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-111804
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with primary cytosolic localization of Trx1.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-1250280
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic function of Trx1.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3225851
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3341343
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-3697882
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-5676917
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-5676940
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-73646
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:15246877
  review:
    summary: This study demonstrates that S-nitrosation of Trx leads to 
      dissociation from ASK1, activating the kinase [PMID:15246877].
    action: ACCEPT
    reason: The study validates the functional Trx-ASK1 interaction and shows 
      that redox modification of Trx regulates ASK1 activity.
    supported_by:
    - reference_id: PMID:15246877
      supporting_text: N2O3-dependent S-nitrosation of Trx at approximately 
        2-fold of NO excess compared to the superoxide amount resulted in 
        dissociation and activation of apoptosis signal regulating kinase 1 
        (ASK1).
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:17260951
  review:
    summary: Crystal structure study of S-nitrosylated human thioredoxin showing
      homodimer formation [PMID:17260951].
    action: ACCEPT
    reason: The study provides structural evidence for Trx1 homodimerization and
      S-nitrosylation at Cys62 and Cys69, important for understanding Trx1 
      regulation.
    supported_by:
    - reference_id: PMID:17260951
      supporting_text: S-Nitroso modifications of cysteines 62 and 69 are 
        clearly visible in the structure and display planar cis geometries, 
        whereas cysteines 32, 35, and 73 form intra- and intermolecular 
        disulfide bonds.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:9108029
  review:
    summary: Foundational study demonstrating direct association between Trx and
      Ref-1/APE1 to regulate AP-1 transcriptional activity [PMID:9108029].
    action: ACCEPT
    reason: This is a key study establishing the Trx-Ref-1 interaction and its 
      role in redox regulation of transcription factors. The interaction 
      requires the Trx catalytic cysteines.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: To prove the direct active site-mediated association 
        between TRX and Ref-1, we generated a series of substitution-mutant 
        cysteine residues of TRX. In both an in vitro diamide-induced 
        cross-linking study and an in vivo mammalian two-hybrid assay we proved 
        that TRX can associate directly with Ref-1 in the nucleus
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IDA
  original_reference_id: PMID:1332947
  review:
    summary: Key study demonstrating secretion of thioredoxin through a 
      leaderless pathway [PMID:1332947].
    action: ACCEPT
    reason: This study established that Trx1 is secreted by various cell types 
      through a non-classical secretory pathway, independent of the ER-Golgi 
      route.
    supported_by:
    - reference_id: PMID:1332947
      supporting_text: thioredoxin is actively secreted by a variety of normal 
        and transformed cells, including fibroblasts, airway epithelial cells, 
        and activated B and T lymphocytes. Neither brefeldin A nor 
        dinitrophenol, two drugs that block transport through the exocytic 
        pathway, inhibit secretion of thioredoxin
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IDA
  original_reference_id: PMID:9108029
  review:
    summary: Study demonstrating nuclear translocation of Trx in response to PMA
      treatment [PMID:9108029].
    action: ACCEPT
    reason: The study clearly shows Trx translocation to the nucleus where it 
      interacts with Ref-1 to regulate AP-1 activity.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: Phorbol 12-myristate 13 acetate efficiently translocated 
        TRX into the HeLa cell nucleus where Ref-1 preexists.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:9108029
  review:
    summary: Study confirming cytoplasmic localization of Trx in unstimulated 
      cells [PMID:9108029].
    action: ACCEPT
    reason: The cytoplasm is the primary location for Trx1 before nuclear 
      translocation upon stimulation.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: AP-1 transcriptional activity is regulated by a direct 
        association between thioredoxin and Ref-1.
- term:
    id: GO:0009314
    label: response to radiation
  evidence_type: IDA
  original_reference_id: PMID:9108029
  review:
    summary: While the study discusses Trx function, the primary radiation 
      response data is in PMID:11118054.
    action: KEEP_AS_NON_CORE
    reason: The study mentions radiation context but is primarily focused on 
      PMA-induced nuclear translocation. The radiation response is better 
      documented in PMID:11118054.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: AP-1 transcriptional activity is regulated by a direct 
        association between thioredoxin and Ref-1.
- term:
    id: GO:0015035
    label: protein-disulfide reductase activity
  evidence_type: IDA
  original_reference_id: PMID:17182577
  review:
    summary: This study primarily focuses on thioredoxin as an allergen and 
      cross-reactivity between fungal and human thioredoxins [PMID:17182577].
    action: ACCEPT
    reason: Although focused on allergenic properties, the study confirms the 
      disulfide reductase activity is conserved across thioredoxins from 
      different species.
    supported_by:
    - reference_id: PMID:17182577
      supporting_text: We have identified thioredoxins (Trx) of Malassezia 
        sympodialis, a yeast involved in the pathogenesis of atopic eczema, and 
        of Aspergillus fumigatus, a fungus involved in pulmonary complications, 
        as novel IgE-binding proteins. We show that these Trx, including the 
        human enzyme, represent cross-reactive structures
- term:
    id: GO:0015035
    label: protein-disulfide reductase activity
  evidence_type: IDA
  original_reference_id: PMID:19032234
  review:
    summary: Study on thioredoxin allergenicity in allergic bronchopulmonary 
      aspergillosis [PMID:19032234].
    action: ACCEPT
    reason: The study confirms functional conservation of thioredoxin activity 
      across species.
    supported_by:
    - reference_id: PMID:19032234
      supporting_text: All thioredoxins, including the human enzyme, bind IgE 
        from patients with allergic bronchopulmonary aspergillosis and induce 
        allergen-specific proliferation
- term:
    id: GO:0015035
    label: protein-disulfide reductase activity
  evidence_type: IDA
  original_reference_id: PMID:2176490
  review:
    summary: Foundational study characterizing human thioredoxin reactivity and 
      structure-function relationships [PMID:2176490].
    action: ACCEPT
    reason: This is a key study demonstrating the protein-disulfide reductase 
      activity of human thioredoxin using ribonucleotide reductase and insulin 
      reduction assays.
    supported_by:
    - reference_id: PMID:2176490
      supporting_text: HTR was as efficient as E. coli or plant and algal 
        thioredoxins when assayed with E. coli ribonucleotide reductase or for 
        the reduction of insulin.
- term:
    id: GO:0042803
    label: protein homodimerization activity
  evidence_type: IDA
  original_reference_id: PMID:17260951
  review:
    summary: Crystal structure study revealing disulfide-linked homodimer 
      formation in human thioredoxin [PMID:17260951].
    action: ACCEPT
    reason: The study provides high-resolution structural evidence for Trx1 
      homodimerization through Cys73 disulfide bond.
    supported_by:
    - reference_id: PMID:17260951
      supporting_text: cysteines 32, 35, and 73 form intra- and intermolecular 
        disulfide bonds
- term:
    id: GO:0042803
    label: protein homodimerization activity
  evidence_type: IDA
  original_reference_id: PMID:9369469
  review:
    summary: Detailed biochemical and structural study of human thioredoxin 
      homodimerization and its pH regulation [PMID:9369469].
    action: ACCEPT
    reason: The study provides comprehensive biochemical characterization of 
      Trx1 dimerization, including pH dependence and the role of Asp60.
    supported_by:
    - reference_id: PMID:9369469
      supporting_text: A recent crystal structure determination of human 
        thioredoxin revealed an inactive dimeric form of the protein covalently 
        linked through a disulfide bond involving Cys 73 from each monomer
- term:
    id: GO:0045454
    label: cell redox homeostasis
  evidence_type: IDA
  original_reference_id: PMID:2176490
  review:
    summary: Foundational study establishing human thioredoxin function in redox
      reactions [PMID:2176490].
    action: ACCEPT
    reason: This is a core function of thioredoxin - maintaining cellular redox 
      homeostasis through its disulfide reductase activity.
    supported_by:
    - reference_id: PMID:2176490
      supporting_text: The reactivity of human thioredoxin (HTR) was tested in 
        several reactions. HTR was as efficient as E. coli or plant and algal 
        thioredoxins when assayed with E. coli ribonucleotide reductase or for 
        the reduction of insulin.
- term:
    id: GO:0045454
    label: cell redox homeostasis
  evidence_type: IMP
  original_reference_id: PMID:9108029
  review:
    summary: Study demonstrating Trx function in redox regulation of 
      transcription factor activity [PMID:9108029].
    action: ACCEPT
    reason: The study demonstrates that Trx redox status is critical for its 
      function in regulating AP-1 activity, supporting its role in cellular 
      redox homeostasis.
    supported_by:
    - reference_id: PMID:9108029
      supporting_text: Thioredoxin (TRX) is a pleiotropic cellular factor that 
        has thiol-mediated redox activity and is important in regulation of 
        cellular processes
- term:
    id: GO:0047134
    label: protein-disulfide reductase [NAD(P)H] activity
  evidence_type: IDA
  original_reference_id: PMID:17182577
  review:
    summary: Study on thioredoxin allergenicity that confirms enzymatic 
      activity.
    action: REMOVE
    reason: This GO term describes an enzyme that directly uses NAD(P)H to 
      reduce protein disulfides. However, Trx1 itself does not directly use 
      NADPH - it is reduced by thioredoxin reductase which uses NADPH. The 
      correct term is GO:0015035 (protein-disulfide reductase activity), which 
      does not specify the electron donor.
    supported_by:
    - reference_id: PMID:17182577
      supporting_text: Cross-reactivity and 1.4-A crystal structure of 
        Malassezia sympodialis thioredoxin (Mala s 13), a member of a new 
        pan-allergen family.
- term:
    id: GO:0071731
    label: response to nitric oxide
  evidence_type: IMP
  original_reference_id: PMID:16408020
  review:
    summary: This study demonstrates that Trx1 catalyzes S-nitrosation of 
      caspase-3 in response to NO [PMID:16408020].
    action: ACCEPT
    reason: Trx1 responds to NO by becoming S-nitrosylated at Cys73 and 
      subsequently transferring the nitrosyl group to caspase-3, representing a 
      specific cellular response to NO.
    supported_by:
    - reference_id: PMID:16408020
      supporting_text: We demonstrated that a single cysteine in thioredoxin 
        (Trx) is capable of a targeted, reversible transnitrosation reaction 
        with Cys163 of Casp-3.
- term:
    id: GO:0071731
    label: response to nitric oxide
  evidence_type: IMP
  original_reference_id: PMID:17606900
  review:
    summary: Study demonstrating Trx requirement for S-nitrosation of 
      procaspase-3 and inhibition of apoptosis [PMID:17606900].
    action: ACCEPT
    reason: Confirms that Trx1 is essential for NO-mediated S-nitrosation of 
      caspase-3 and consequent anti-apoptotic signaling.
    supported_by:
    - reference_id: PMID:17606900
      supporting_text: Here we show that a specific transnitrosation reaction 
        between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T 
        cells and prevents apoptosis.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:23533145
  review:
    summary: High-throughput proteomics study of exosomes from prostatic 
      secretions.
    action: KEEP_AS_NON_CORE
    reason: High-throughput proteomic identification of Trx1 in exosomes. While 
      consistent with extracellular localization, this is likely a secondary 
      observation rather than a core function.
    supported_by:
    - reference_id: PMID:23533145
      supporting_text: 2013 Apr 23. In-depth proteomic analyses of exosomes 
        isolated from expressed prostatic secretions in urine.
- term:
    id: GO:0003723
    label: RNA binding
  evidence_type: HDA
  original_reference_id: PMID:22658674
  review:
    summary: High-throughput RNA interactome capture study.
    action: MARK_AS_OVER_ANNOTATED
    reason: RNA binding is not a characterized function of thioredoxin. This may
      represent indirect association or false positive from high-throughput 
      screening. Trx1 is not known to have specific RNA binding activity.
    supported_by:
    - reference_id: PMID:22658674
      supporting_text: May 31. Insights into RNA biology from an atlas of 
        mammalian mRNA-binding proteins.
- term:
    id: GO:0003723
    label: RNA binding
  evidence_type: HDA
  original_reference_id: PMID:22681889
  review:
    summary: mRNA-bound proteome study.
    action: MARK_AS_OVER_ANNOTATED
    reason: Same as above - RNA binding is not a characterized function of 
      thioredoxin and likely represents high-throughput screen artifact.
    supported_by:
    - reference_id: PMID:22681889
      supporting_text: The mRNA-bound proteome and its global occupancy profile 
        on protein-coding transcripts.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:19056867
  review:
    summary: Proteomics study of urinary exosomes.
    action: KEEP_AS_NON_CORE
    reason: Consistent with Trx1 secretion, but exosomal localization is not a 
      core function.
    supported_by:
    - reference_id: PMID:19056867
      supporting_text: 2008 Dec 3. Large-scale proteomics and phosphoproteomics 
        of urinary exosomes.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:20458337
  review:
    summary: Study of MHC class II-associated proteins in B-cell exosomes.
    action: KEEP_AS_NON_CORE
    reason: Consistent with extracellular presence of Trx1 but not a core 
      function.
    supported_by:
    - reference_id: PMID:20458337
      supporting_text: 2010 May 11. MHC class II-associated proteins in B-cell 
        exosomes and potential functional implications for exosome biogenesis.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-1250264
  review:
    summary: Reactome annotation for TXNIP binding to reduced thioredoxin in 
      cytosol.
    action: ACCEPT
    reason: The TXNIP-Trx1 interaction occurs in the cytosol and is 
      well-established.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-9796045
  review:
    summary: Reactome annotation for cytosolic localization.
    action: ACCEPT
    reason: Consistent with cytosolic localization.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:11118054
  review:
    summary: Study demonstrating Trx interaction with Ref-1 in the nucleus 
      following ionizing radiation [PMID:11118054].
    action: ACCEPT
    reason: The study validates the Trx-Ref-1 interaction and shows it occurs in
      the nucleus after radiation exposure.
    supported_by:
    - reference_id: PMID:11118054
      supporting_text: It was shown that a physical interaction between Ref-1 
        and TRX occurs within the nucleus and is enhanced after exposure to IR.
- term:
    id: GO:0009314
    label: response to radiation
  evidence_type: IDA
  original_reference_id: PMID:11118054
  review:
    summary: Study demonstrating Trx nuclear translocation and AP-1 activation 
      in response to ionizing radiation [PMID:11118054].
    action: ACCEPT
    reason: The study clearly demonstrates that Trx responds to ionizing 
      radiation by translocating to the nucleus and activating AP-1.
    supported_by:
    - reference_id: PMID:11118054
      supporting_text: After exposure to IR, nuclear levels of immunoreactive 
        TRX increased, accompanied by an increase in AP-1 DNA binding activity.
- term:
    id: GO:0043388
    label: positive regulation of DNA binding
  evidence_type: IDA
  original_reference_id: PMID:11118054
  review:
    summary: Study demonstrating that Trx from irradiated cells activates AP-1 
      DNA binding activity [PMID:11118054].
    action: ACCEPT
    reason: The study directly demonstrates that Trx positively regulates AP-1 
      DNA binding activity through its redox function.
    supported_by:
    - reference_id: PMID:11118054
      supporting_text: Furthermore, TRX immunoprecipitated from irradiated cells
        was capable of activating AP-1 DNA binding activity in nonirradiated 
        nuclear extracts.
- term:
    id: GO:0043066
    label: negative regulation of apoptotic process
  evidence_type: NAS
  review:
    summary: Added to align core_functions with existing annotations.
    action: NEW
    reason: Core function term not present in existing_annotations.
    supported_by:
    - reference_id: PMID:16408020
      supporting_text: We demonstrated that a single cysteine in thioredoxin 
        (Trx) is capable of a targeted, reversible transnitrosation reaction 
        with Cys163 of Casp-3.
    - reference_id: PMID:17606900
      supporting_text: Here we show that a specific transnitrosation reaction 
        between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T 
        cells and prevents apoptosis.
references:
- id: GO_REF:0000043
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular 
    Location vocabulary mapping
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning 
    models
  findings: []
- id: GO_REF:0000120
  title: Combined Automated Annotation using Multiple IEA Methods
  findings: []
- id: PMID:10814541
  title: A possible interaction of thioredoxin with VDUP1 in HeLa cells detected
    in a yeast two-hybrid system
  findings:
  - statement: VDUP1/TXNIP identified as thioredoxin-binding protein
  - statement: Interaction requires Cys32 and Cys35 of Trx
- id: PMID:11118054
  title: Thioredoxin nuclear translocation and interaction with redox factor-1 
    activates the activator protein-1 transcription factor in response to 
    ionizing radiation.
  findings:
  - statement: Trx translocates to nucleus after IR exposure
  - statement: Trx-Ref-1 interaction enhanced after radiation
  - statement: Trx activates AP-1 DNA binding activity
- id: PMID:1332947
  title: Secretion of thioredoxin by normal and neoplastic cells through a 
    leaderless secretory pathway
  findings:
  - statement: Trx secreted by various cell types
  - statement: Secretion is independent of ER-Golgi pathway
- id: PMID:15246877
  title: S-nitrosation of thioredoxin in the nitrogen monoxide/superoxide system
    activates apoptosis signal-regulating kinase 1.
  findings:
  - statement: S-nitrosation of Trx leads to ASK1 dissociation and activation
- id: PMID:15480426
  title: Thioredoxin modulates activator protein 1 (AP-1) activity and p27Kip1 
    degradation through direct interaction with Jab1.
  findings:
  - statement: Trx directly interacts with Jab1
  - statement: Negatively regulates Jab1-controlled signaling
- id: PMID:16408020
  title: Thioredoxin catalyzes the S-nitrosation of the caspase-3 active site 
    cysteine
  findings:
  - statement: Trx catalyzes transnitrosation of caspase-3
  - statement: Cys73 of Trx involved in nitrosyl transfer
- id: PMID:17182577
  title: Cross-reactivity and 1.4-A crystal structure of Malassezia sympodialis 
    thioredoxin (Mala s 13), a member of a new pan-allergen family.
  findings:
  - statement: Human Trx is a cross-reactive allergen
  - statement: Conserved thioredoxin fold structure
- id: PMID:17260951
  title: Buried S-nitrosocysteine revealed in crystal structures of human 
    thioredoxin
  findings:
  - statement: Crystal structure of S-nitrosylated Trx1
  - statement: S-nitrosylation at Cys62 and Cys69
  - statement: Homodimer formation through Cys73
- id: PMID:17557078
  title: Selective redox regulation of cytokine receptor signaling by 
    extracellular thioredoxin-1
  findings:
  - statement: CD30 identified as specific extracellular target of Trx1
  - statement: Trx1 modulates CD30 ligand binding and signaling
- id: PMID:17606900
  title: Thioredoxin is required for S-nitrosation of procaspase-3 and the 
    inhibition of apoptosis in Jurkat cells.
  findings:
  - statement: Trx mediates transnitrosation of procaspase-3
  - statement: Prevents apoptosis in T cells
- id: PMID:19032234
  title: Auto- and cross-reactivity to thioredoxin allergens in allergic 
    bronchopulmonary aspergillosis
  findings:
  - statement: Human Trx binds IgE from ABPA patients
  - statement: Cross-reactivity with fungal thioredoxins
- id: PMID:19690162
  title: Salmonella type III secretion effector SlrP is an E3 ubiquitin ligase 
    for mammalian thioredoxin
  findings:
  - statement: SlrP ubiquitinates Trx
  - statement: Leads to decreased Trx activity
- id: PMID:2176490
  title: Human thioredoxin reactivity-structure/function relationship
  findings:
  - statement: Trx reduces ribonucleotide reductase efficiently
  - statement: Reduces insulin as other thioredoxins
- id: PMID:21771788
  title: Positive regulation of apoptosis signal-regulating kinase 1 signaling 
    by ZPR9 protein, a zinc finger protein.
  findings:
  - statement: ZPR9 destabilizes Trx-ASK1 complex
  - statement: Confirms Trx as negative regulator of ASK1
- id: PMID:22492997
  title: DJ-1 induces thioredoxin 1 expression through the Nrf2 pathway
  findings:
  - statement: Trx1 expression induced by DJ-1 via Nrf2
  - statement: Trx1 required for H2O2-induced AKT activation
- id: PMID:24976139
  title: Reactivation of oxidized PTP1B and PTEN by thioredoxin 1
  findings:
  - statement: Trx1 reactivates oxidized phosphatases
  - statement: Direct thiol-disulfide exchange demonstrated
- id: PMID:25402766
  title: Peroxiredoxin-2 and STAT3 form a redox relay for H2O2 signaling
  findings:
  - statement: Confirms Trx1 as reductant of Prx2
- id: PMID:9108029
  title: AP-1 transcriptional activity is regulated by a direct association 
    between thioredoxin and Ref-1.
  findings:
  - statement: Trx directly associates with Ref-1/APE1
  - statement: Requires Trx catalytic cysteines
  - statement: Nuclear translocation upon PMA treatment
- id: PMID:9369469
  title: "Human thioredoxin homodimers: regulation by pH, role of aspartate 60, and crystal structure of the aspartate 60 --> asparagine mutant."
  findings:
  - statement: Trx forms homodimers through Cys73
  - statement: pH-dependent dimerization
  - statement: Asp60 regulates dimerization
- id: PMID:15657067
  title: Phosphotyrosine signaling networks in epidermal growth factor receptor 
    overexpressing squamous carcinoma cells.
  findings: []
- id: PMID:17353931
  title: Large-scale mapping of human protein-protein interactions by mass 
    spectrometry.
  findings: []
- id: PMID:19805025
  title: CIB1 functions as a Ca(2+)-sensitive modulator of stress-induced 
    signaling by targeting ASK1.
  findings: []
- id: PMID:20029029
  title: Regulation of epidermal growth factor receptor trafficking by lysine 
    deacetylase HDAC6.
  findings: []
- id: PMID:21145461
  title: Dynamics of cullin-RING ubiquitin ligase network revealed by systematic
    quantitative proteomics.
  findings: []
- id: PMID:21988832
  title: Toward an understanding of the protein interaction network of the human
    liver.
  findings: []
- id: PMID:24658140
  title: The mammalian-membrane two-hybrid assay (MaMTH) for probing 
    membrane-protein interactions in human cells.
  findings: []
- id: PMID:28514442
  title: Architecture of the human interactome defines protein communities and 
    disease networks.
  findings: []
- id: PMID:31980649
  title: Extensive rewiring of the EGFR network in colorectal cancer cells 
    expressing transforming levels of KRAS(G13D).
  findings: []
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
- id: PMID:32814053
  title: Interactome Mapping Provides a Network of Neurodegenerative Disease 
    Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
  findings: []
- id: PMID:23533145
  title: In-depth proteomic analyses of exosomes isolated from expressed 
    prostatic secretions in urine.
  findings: []
- id: PMID:22658674
  title: Insights into RNA biology from an atlas of mammalian mRNA-binding 
    proteins.
  findings: []
- id: PMID:22681889
  title: The mRNA-bound proteome and its global occupancy profile on 
    protein-coding transcripts.
  findings: []
- id: PMID:19056867
  title: Large-scale proteomics and phosphoproteomics of urinary exosomes.
  findings: []
- id: PMID:20458337
  title: "MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis."
  findings: []
- id: Reactome:R-NUL-9617742
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-111751
  title: Reactome pathway - Ribonucleotide reductase reaction
  findings: []
- id: Reactome:R-HSA-111804
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-1250280
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-3225851
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-3341343
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-3697882
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-5676917
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-5676940
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-73646
  title: Reactome pathway annotation
  findings: []
- id: Reactome:R-HSA-1250264
  title: Reactome pathway - TXNIP binding to reduced thioredoxin
  findings: []
- id: Reactome:R-HSA-9796045
  title: Reactome pathway annotation
  findings: []
- id: file:human/TXN/TXN-deep-research-falcon.md
  title: Deep research on TXN function
  findings: []
- id: file:human/TXN/TXN-deep-research-cyberian.md
  title: Cyberian deep research on TXN function
  findings: []
core_functions:
- description: Trx1 reduces disulfide bonds in target proteins via 
    dithiol-disulfide exchange using the CGPC active site. Demonstrated with 
    ribonucleotide reductase, insulin, peroxiredoxins, and phosphatases.
  molecular_function:
    id: GO:0015035
    label: protein-disulfide reductase activity
  locations:
  - id: GO:0005829
    label: cytosol
  directly_involved_in:
  - id: GO:0045454
    label: cell redox homeostasis
  supported_by:
  - reference_id: PMID:2176490
    supporting_text: HTR was as efficient as E. coli or plant and algal 
      thioredoxins when assayed with E. coli ribonucleotide reductase or for the
      reduction of insulin.
  - reference_id: PMID:24976139
    supporting_text: Finally, using a mechanism-based trapping approach, we 
      demonstrate direct thiol disulphide exchange between the active sites of 
      thioredoxin and either phosphatase.
- description: Trx1 regulates DNA-binding activity of transcription factors AP-1
    and NF-kB through interaction with APE1/Ref-1. Nuclear translocation of Trx 
    and interaction with Ref-1 potentiates AP-1 DNA binding in response to 
    stress signals.
  molecular_function:
    id: GO:0015035
    label: protein-disulfide reductase activity
  locations:
  - id: GO:0005634
    label: nucleus
  directly_involved_in:
  - id: GO:0043388
    label: positive regulation of DNA binding
  supported_by:
  - reference_id: PMID:9108029
    supporting_text: To prove the direct active site-mediated association 
      between TRX and Ref-1, we generated a series of substitution-mutant 
      cysteine residues of TRX. In both an in vitro diamide-induced 
      cross-linking study and an in vivo mammalian two-hybrid assay we proved 
      that TRX can associate directly with Ref-1 in the nucleus
  - reference_id: PMID:11118054
    supporting_text: Furthermore, TRX immunoprecipitated from irradiated cells 
      was capable of activating AP-1 DNA binding activity in nonirradiated 
      nuclear extracts.
- description: Trx1 responds to NO by becoming S-nitrosylated at Cys73 and 
    mediating transnitrosation of target proteins including caspase-3, resulting
    in anti-apoptotic signaling.
  molecular_function:
    id: GO:0015035
    label: protein-disulfide reductase activity
  locations:
  - id: GO:0005829
    label: cytosol
  directly_involved_in:
  - id: GO:0071731
    label: response to nitric oxide
  - id: GO:0043066
    label: negative regulation of apoptotic process
  supported_by:
  - reference_id: PMID:16408020
    supporting_text: We demonstrated that a single cysteine in thioredoxin (Trx)
      is capable of a targeted, reversible transnitrosation reaction with Cys163
      of Casp-3.
  - reference_id: PMID:17606900
    supporting_text: Here we show that a specific transnitrosation reaction 
      between procaspase-3 and thioredoxin-1 (Trx) occurs in cultured human T 
      cells and prevents apoptosis.
proposed_new_terms: []
suggested_questions:
- question: What is the relative contribution of cytosolic vs nuclear Trx1 to 
    cellular redox homeostasis?
- question: How is Trx1 secretion regulated and what are the primary 
    extracellular functions?
- question: What determines substrate specificity among the various Trx1 
    targets?
suggested_experiments:
- description: Quantitative proteomics to identify the complete Trx1 substrate 
    repertoire under different stress conditions
  hypothesis: Trx1 has condition-specific substrates that change depending on 
    the type of cellular stress.
  experiment_type: Quantitative proteomics
- description: Live cell imaging to monitor Trx1 nuclear translocation dynamics
  hypothesis: Trx1 nuclear translocation follows specific kinetics that 
    correlate with AP-1 activation.
  experiment_type: Live cell imaging
- description: Structural studies of Trx1-ASK1 complex to understand regulatory 
    mechanism
  hypothesis: Reduced Trx1 binds ASK1 in a specific conformation that prevents 
    kinase activation.
  experiment_type: Structural biology (cryo-EM or X-ray crystallography)