Cbl

UniProt ID: P22682
Organism: Mus musculus
Review Status: COMPLETE
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Gene Description

Cbl is a RING-type E3 ubiquitin-protein ligase and phosphotyrosine-binding adaptor that recognizes activated receptor tyrosine kinases and other signaling proteins. It ubiquitinates receptors and signaling components to promote endocytosis, lysosomal or proteasomal turnover, and negative feedback on EGFR, PDGFRA, KIT, CSF1R, SRC-family, and immune-receptor signaling pathways.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0061630 ubiquitin protein ligase activity
IBA
GO_REF:0000033
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IBA
GO_REF:0000033
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0005886 plasma membrane
IBA
GO_REF:0000033
ACCEPT
Summary: Cbl is recruited to activated receptors at the plasma membrane where it ubiquitinates them (IDA:MGI); a core functional location.
Reason: Site where Cbl engages activated membrane receptors; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0007165 signal transduction
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Very broad BP (IBA) consistent with Cbl as a signaling protein; correct but unspecific, retained as non-core context.
Reason: High-level signaling context; correct but non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A central negative-feedback regulator of receptor signaling** by linking receptor activation to ubiquitin-dependent receptor trafficking and degradation (EGFR archetype).
GO:0045121 membrane raft
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Cbl colocalizes with FGFR2 in lipid rafts at the cell membrane (UniProt Note); a microdomain refinement of its membrane recruitment (IBA).
Reason: Lipid-raft microdomain localization; refinement of membrane recruitment, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0030971 receptor tyrosine kinase binding
IBA
GO_REF:0000033
ACCEPT
Summary: Cbl binds activated RTKs (KIT, FLT1, PDGFRA/B, CSF1R, EPHA8, KDR, EGFR) via its TKB domain as the substrate-selection step of receptor downregulation (IBA).
Reason: Core recognition of RTK substrates; central to Cbl's negative-regulator role.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**TKBD/TKB**: a composite domain comprising a **4-helix bundle**, **EF-hand**, and an **SH2-like phosphotyrosine-recognition module** that mediates binding to phosphorylated targets.
GO:0001784 phosphotyrosine residue binding
IEA
GO_REF:0000002
ACCEPT
Summary: Core substrate-recognition MF: the TKB/PTB (SH2-like) domain binds phosphotyrosine on activated receptors, the mechanism by which Cbl selects substrates.
Reason: Defines how Cbl recognizes activated, phosphorylated receptor substrates; core adaptor MF.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**TKBD/TKB**: a composite domain comprising a **4-helix bundle**, **EF-hand**, and an **SH2-like phosphotyrosine-recognition module** that mediates binding to phosphorylated targets.
GO:0004842 ubiquitin-protein transferase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Core catalytic MF (EC 2.3.2.27) describing the ubiquitin transfer reaction Cbl catalyzes; equivalent framing of its RING E3 activity, retained as a core function.
Reason: Core catalytic activity matching the UniProt CATALYTIC ACTIVITY/EC 2.3.2.27 reaction.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0005509 calcium ion binding
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: Cbl has one functional Ca2+-binding EF-hand within the TKB domain (structural/regulatory), but Ca2+ binding is not a core function and is captured by the TKB domain architecture.
Reason: Single structural EF-hand Ca2+ site; not a core MF.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**RING finger**: binds E2 enzymes and is required for ubiquitin transfer to substrates.
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: Consistent with UniProt SUBCELLULAR LOCATION (Cytoplasm); a correct, if general, parent localization for the cytosolic Cbl pool.
Reason: Matches UniProt cytoplasmic localization; general but correct core compartment.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005794 Golgi apparatus
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Reported Golgi localization (IDA:UniProtKB; PubMed:29237719) in the ciliary PDGFRA context; a genuine secondary compartment, not Cbl's principal site of action.
Reason: Documented but secondary localization; keep as non-core (do not remove a sourced IDA).
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0005886 plasma membrane
IEA
GO_REF:0000120
ACCEPT
Summary: Cbl is recruited to activated receptors at the plasma membrane where it ubiquitinates them (IDA:MGI); a core functional location.
Reason: Site where Cbl engages activated membrane receptors; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Cbl localizes to the primary cilium where it regulates ciliary PDGFRA signaling (IDA:UniProtKB; PubMed:29237719); a real but context-specific localization.
Reason: Genuine ciliary localization tied to PDGFRA feedback; specialized, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0007166 cell surface receptor signaling pathway
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: Broad pathway term (IEA) situating Cbl within receptor signaling; correct but unspecific, retained as non-core context.
Reason: Broad correct context term; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A central negative-feedback regulator of receptor signaling** by linking receptor activation to ubiquitin-dependent receptor trafficking and degradation (EGFR archetype).
GO:0008270 zinc ion binding
IEA
GO_REF:0000043
MARK AS OVER ANNOTATED
Summary: Reflects the structural Zn(2+) coordinated by the RING-type zinc finger; structural, not an independent function, and subsumed by the E3 ligase activity annotation.
Reason: Structural zinc of the RING domain; over-annotated as a standalone MF.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**RING finger**: binds E2 enzymes and is required for ubiquitin transfer to substrates.
GO:0016740 transferase activity
IEA
GO_REF:0000043
MODIFY
Summary: Bare 'transferase activity' is far too generic for an E3 ligase whose specific activity is ubiquitin transfer; replace with the specific ubiquitin-protein transferase term.
Reason: Uninformatively general parent of the specific ubiquitin transferase activity.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0023051 regulation of signaling
IEA
GO_REF:0000002
MODIFY
Summary: Top-level vague term; Cbl predominantly negatively regulates signaling by receptor downregulation, so refine to negative regulation of signal transduction.
Reason: Very general; replace with the negative-regulation child reflecting Cbl's role.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A central negative-feedback regulator of receptor signaling** by linking receptor activation to ubiquitin-dependent receptor trafficking and degradation (EGFR archetype).
GO:0046872 metal ion binding
IEA
GO_REF:0000120
MARK AS OVER ANNOTATED
Summary: Generic parent of the structural zinc/calcium binding; uninformative and not a function in its own right.
Reason: Generic metal-binding term with no independent functional meaning.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**RING finger**: binds E2 enzymes and is required for ubiquitin transfer to substrates.
GO:0061630 ubiquitin protein ligase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:1902531 regulation of intracellular signal transduction
IEA
GO_REF:0000117
MODIFY
Summary: Overly broad; Cbl's documented role is negative regulation via receptor ubiquitination/downregulation, better captured by negative regulation of signal transduction.
Reason: Too general; a more specific negative-regulation child is available.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A central negative-feedback regulator of receptor signaling** by linking receptor activation to ubiquitin-dependent receptor trafficking and degradation (EGFR archetype).
GO:2000583 regulation of platelet-derived growth factor receptor-alpha signaling pathway
IEA
GO_REF:0000117
ACCEPT
Summary: Cbl (with Cbl-b) provides feedback inhibition of ciliary PDGFRA signaling via PDGFRA ubiquitination and internalization (IMP:UniProtKB; PubMed:29237719).
Reason: Specific, experimentally supported PDGFRA negative-feedback role; mirrors UniProt FUNCTION.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-family ubiquitination of activated RTKs (EGFR paradigm) is a central, experimentally grounded function that links phosphorylation-dependent recognition to endosomal sorting and receptor downregulation.
GO:0005515 protein binding
IPI
PMID:12559036
CD2AP/CMS regulates endosome morphology and traffic to the d...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:23374343
Induction of Siglec-G by RNA viruses inhibits the innate imm...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:23799367
Threshold-controlled ubiquitination of the EGFR directs rece...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:24440350
Targeting of the MET receptor tyrosine kinase by small molec...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:27474268
Co-recruitment analysis of the CBL and CBLB signalosomes in ...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:7657591
Tyrosine phosphorylation of the c-cbl proto-oncogene protein...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:9890970
Fyn associates with Cbl and phosphorylates tyrosine 731 in C...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0000209 protein polyubiquitination
IEA
GO_REF:0000107
ACCEPT
Summary: Cbl multi/poly-ubiquitinates activated RTKs (e.g. CSF1R multiubiquitination), a documented degradative outcome of its ligase activity.
Reason: Specific, correct ubiquitin-chain type produced by Cbl on receptor substrates.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0005829 cytosol
IEA
GO_REF:0000120
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005925 focal adhesion
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Focal-adhesion localization (IEA/ISO) fits Cbl's roles in adhesion/cytoskeletal signaling; a context-specific site rather than a core compartment.
Reason: Context-specific adhesion-site localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0006511 ubiquitin-dependent protein catabolic process
IEA
GO_REF:0000120
ACCEPT
Summary: Core BP: Cbl-mediated ubiquitination routes substrate receptors to proteasomal/lysosomal degradation, terminating signaling (IMP:MGI).
Reason: Core outcome of Cbl ubiquitination β€” substrate degradation; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0006513 protein monoubiquitination
IEA
GO_REF:0000107
ACCEPT
Summary: Cbl also monoubiquitinates receptors, a recognized signal for endocytic sorting; a valid specific ubiquitination outcome of Cbl.
Reason: Documented mono-ubiquitination activity supporting receptor internalization.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0006974 DNA damage response
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Single IEA annotation with no established Cbl-specific mechanism; weak but not contradicted, so retained as non-core rather than removed.
Reason: Weak electronic annotation; retain as non-core, mechanism unclear.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A context-dependent signaling rheostat** in immune and myeloid cells, where adaptor networks (e.g., BLNK/Fyn/PI3K in CLR signaling) tune c-Cbl phosphorylation state and thereby cytoskeletal/migratory behavior and host defense.
GO:0008584 male gonad development
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Developmental annotation (IEA) reflecting pleiotropic roles in organ development; not a core molecular mechanism.
Reason: Pleiotropic developmental role; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In intestine, c-Cbl and Cbl-b are partly redundant
GO:0010332 response to gamma radiation
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: IEA stimulus-response term tied to DNA-damage context; peripheral and without specific Cbl mechanism.
Reason: Generic radiation-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0014823 response to activity
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Broad stimulus-response term (IEA) lacking a specific Cbl mechanism; peripheral contextual annotation.
Reason: Vague stimulus-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0016567 protein ubiquitination
IEA
GO_REF:0000120
ACCEPT
Summary: Core BP capturing Cbl's central activity of conjugating ubiquitin to substrate proteins (IDA:MGI); directly downstream of its E3 ligase MF.
Reason: Direct experimental annotation of Cbl's core ubiquitination process.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0017124 SH3 domain binding
IEA
GO_REF:0000120
MARK AS OVER ANNOTATED
Summary: Reflects proline-rich-mediated recruitment of SH3-containing adaptors (Grb2, CD2AP/CIN85) but is a generic binding descriptor that does not convey Cbl's catalytic/adaptor role.
Reason: Generic binding MF; partner-specific adaptor links are captured elsewhere.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0019901 protein kinase binding
IEA
GO_REF:0000107
MARK AS OVER ANNOTATED
Summary: Redundant generic kinase-binding term superseded by the more specific protein/receptor tyrosine kinase binding annotations that describe Cbl's actual substrate recognition.
Reason: Generic and redundant with the specific tyrosine-kinase-binding MFs.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Axonal localization (IEA/ISO) is a neuronal-context site consistent with Eph-receptor regulation; not a core compartment for the E3/adaptor function.
Reason: Neuronal-context localization; specialized, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0030426 growth cone
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Growth-cone localization (IEA/ISO) reflects neuronal/cytoskeletal context (e.g. Eph signaling); peripheral specialized localization.
Reason: Neuronal context localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0033574 response to testosterone
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: IEA hormone-response term, likely tied to gonad context; peripheral with no specific Cbl mechanism.
Reason: Generic hormone-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0036120 cellular response to platelet-derived growth factor stimulus
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Cbl acts in PDGF receptor signaling responses (IEA); the mechanistic core (PDGFRA regulation) is captured separately, so this broad response is non-core.
Reason: Broad PDGF-response context; mechanism captured by the PDGFRA-regulation term.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Phospho-Cbl interacts with PIK3R1 to recruit PI3K (UniProt SUBUNIT); a genuine partner interaction supporting PI3K coupling but downstream of Cbl's core E3 role.
Reason: Documented PIK3R1 interaction; secondary/effector partner binding, not core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Mechanistically, BLNK modulated c-Cbl phosphorylation and **PI3K-associated actin remodeling**, linking c-Cbl to cytoskeletal outputs required for renal macrophage recruitment.
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IEA
GO_REF:0000120
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0042594 response to starvation
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: IEA nutrient-deprivation response with no Cbl-specific mechanism; peripheral contextual annotation.
Reason: Generic starvation-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0043066 negative regulation of apoptotic process
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Cbl influences survival signaling (e.g. via PI3K/AKT) in some contexts (IEA/ISO); a pleiotropic downstream outcome, not a core mechanism.
Reason: Pleiotropic survival-signaling outcome; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A context-dependent signaling rheostat** in immune and myeloid cells, where adaptor networks (e.g., BLNK/Fyn/PI3K in CLR signaling) tune c-Cbl phosphorylation state and thereby cytoskeletal/migratory behavior and host defense.
GO:0043303 mast cell degranulation
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Cbl modulates mast-cell signaling (KIT/FcΞ΅RI) affecting degranulation (IEA); a downstream cell-type-specific physiological readout.
Reason: Cell-type-specific physiological outcome; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0045471 response to ethanol
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Single IEA stimulus-response annotation with no Cbl-specific mechanism; peripheral.
Reason: Generic chemical-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:0046875 ephrin receptor binding
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Cbl binds Eph receptors (EPHB1, EPHA8) to drive their ubiquitination/degradation (IPI); a real but substrate-specific interaction, an instance of its general RTK-binding role.
Reason: Real specific RTK interaction; non-core instance of the general substrate-binding function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Receptor tyrosine kinases (RTKs)
GO:0048260 positive regulation of receptor-mediated endocytosis
IEA
GO_REF:0000107
ACCEPT
Summary: Cbl promotes ligand-induced internalization of its RTK substrates (e.g. CSF1R multiubiquitination and endocytosis); a core adaptor/trafficking function (ISS).
Reason: Cbl actively drives receptor internalization β€” core downregulation mechanism.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0048471 perinuclear region of cytoplasm
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Perinuclear localization (IEA/ISO) is consistent with endosomal/recycling trafficking compartments; a sub-cytoplasmic refinement, non-core.
Reason: Sub-cytoplasmic trafficking-compartment localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0050821 protein stabilization
IEA
GO_REF:0000107
MARK AS OVER ANNOTATED
Summary: Cbl's core action is to destabilize/degrade its substrates; a 'protein stabilization' annotation (IEA/ISO/ISS) is at odds with its principal degradative function and likely over-propagated.
Reason: Runs counter to Cbl's degradative role; likely over-annotation.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0050860 negative regulation of T cell receptor signaling pathway
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Cbl negatively regulates TCR signaling by ubiquitinating/downregulating proximal components (ZAP70, LAT, Src-family kinases); cell-type-specific instance of receptor downregulation.
Reason: Immune-specific instance of Cbl's negative receptor regulation; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0050868 negative regulation of T cell activation
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Cbl dampens TCR signaling (with SLA2/ZAP70) and thereby T-cell activation; an important but downstream, cell-type-specific consequence of its E3/adaptor role.
Reason: Pleiotropic immune-regulatory outcome; downstream of core E3 function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0051865 protein autoubiquitination
IEA
GO_REF:0000107
ACCEPT
Summary: Cbl undergoes autoubiquitination (it is itself ubiquitinated leading to proteasomal turnover, per UniProt PTM), a genuine regulatory activity of the RING ligase.
Reason: Self-ubiquitination is a documented PTM/activity consistent with RING E3 function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Phospho-Cbl recruits PI3K (e.g. Tyr-731 form in osteoclasts) promoting PI3K/AKT signaling; a context-specific positive role distinct from its main negative-regulator function.
Reason: Context-specific PI3K/AKT-promoting role; downstream, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Mechanistically, BLNK modulated c-Cbl phosphorylation and **PI3K-associated actin remodeling**, linking c-Cbl to cytoskeletal outputs required for renal macrophage recruitment.
GO:0070534 protein K63-linked ubiquitination
IEA
GO_REF:0000107
MODIFY
Summary: K63-linked chains drive endocytic/trafficking fates not proteasomal degradation; supported only by IEA/ISO/ISS, so generalize to the well-supported parent protein ubiquitination rather than asserting a specific chain linkage for mouse Cbl.
Reason: Chain-linkage specificity is only electronically inferred; generalize to supported parent.
Proposed replacements: protein ubiquitination
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0071456 cellular response to hypoxia
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Hypoxia-response annotation (IEA) is a contextual stimulus-response with no specific Cbl mechanism asserted; peripheral.
Reason: Generic stimulus-response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:1990090 cellular response to nerve growth factor stimulus
IEA
GO_REF:0000107
KEEP AS NON CORE
Summary: Reflects Cbl participation downstream of NGF/TrkA receptor signaling (IEA); a context response rather than a core mechanism.
Reason: Downstream growth-factor response context; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Across receptor systems, c-Cbl is best understood as an **activation-dependent negative regulator** of signaling
GO:1990782 protein tyrosine kinase binding
IEA
GO_REF:0000107
ACCEPT
Summary: Cbl binds activated tyrosine kinases (RTKs and SRC-family) through its TKB domain to target them for ubiquitination; a core, mechanistically central interaction MF.
Reason: Core adaptor MF β€” recognition of the tyrosine-kinase substrates Cbl downregulates.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**TKBD/TKB**: a composite domain comprising a **4-helix bundle**, **EF-hand**, and an **SH2-like phosphotyrosine-recognition module** that mediates binding to phosphorylated targets.
GO:0005794 Golgi apparatus
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Reported Golgi localization (IDA:UniProtKB; PubMed:29237719) in the ciliary PDGFRA context; a genuine secondary compartment, not Cbl's principal site of action.
Reason: Documented but secondary localization; keep as non-core (do not remove a sourced IDA).
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0005829 cytosol
ISO
GO_REF:0000119
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005886 plasma membrane
ISO
GO_REF:0000119
ACCEPT
Summary: Cbl is recruited to activated receptors at the plasma membrane where it ubiquitinates them (IDA:MGI); a core functional location.
Reason: Site where Cbl engages activated membrane receptors; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Cbl localizes to the primary cilium where it regulates ciliary PDGFRA signaling (IDA:UniProtKB; PubMed:29237719); a real but context-specific localization.
Reason: Genuine ciliary localization tied to PDGFRA feedback; specialized, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0006511 ubiquitin-dependent protein catabolic process
ISO
GO_REF:0000119
ACCEPT
Summary: Core BP: Cbl-mediated ubiquitination routes substrate receptors to proteasomal/lysosomal degradation, terminating signaling (IMP:MGI).
Reason: Core outcome of Cbl ubiquitination β€” substrate degradation; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0016567 protein ubiquitination
ISO
GO_REF:0000119
ACCEPT
Summary: Core BP capturing Cbl's central activity of conjugating ubiquitin to substrate proteins (IDA:MGI); directly downstream of its E3 ligase MF.
Reason: Direct experimental annotation of Cbl's core ubiquitination process.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0017124 SH3 domain binding
ISO
GO_REF:0000119
MARK AS OVER ANNOTATED
Summary: Reflects proline-rich-mediated recruitment of SH3-containing adaptors (Grb2, CD2AP/CIN85) but is a generic binding descriptor that does not convey Cbl's catalytic/adaptor role.
Reason: Generic binding MF; partner-specific adaptor links are captured elsewhere.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
ISO
GO_REF:0000119
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0043066 negative regulation of apoptotic process
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Cbl influences survival signaling (e.g. via PI3K/AKT) in some contexts (IEA/ISO); a pleiotropic downstream outcome, not a core mechanism.
Reason: Pleiotropic survival-signaling outcome; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A context-dependent signaling rheostat** in immune and myeloid cells, where adaptor networks (e.g., BLNK/Fyn/PI3K in CLR signaling) tune c-Cbl phosphorylation state and thereby cytoskeletal/migratory behavior and host defense.
GO:0046875 ephrin receptor binding
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Cbl binds Eph receptors (EPHB1, EPHA8) to drive their ubiquitination/degradation (IPI); a real but substrate-specific interaction, an instance of its general RTK-binding role.
Reason: Real specific RTK interaction; non-core instance of the general substrate-binding function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Receptor tyrosine kinases (RTKs)
GO:0048260 positive regulation of receptor-mediated endocytosis
ISO
GO_REF:0000119
ACCEPT
Summary: Cbl promotes ligand-induced internalization of its RTK substrates (e.g. CSF1R multiubiquitination and endocytosis); a core adaptor/trafficking function (ISS).
Reason: Cbl actively drives receptor internalization β€” core downregulation mechanism.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0050821 protein stabilization
ISO
GO_REF:0000119
MARK AS OVER ANNOTATED
Summary: Cbl's core action is to destabilize/degrade its substrates; a 'protein stabilization' annotation (IEA/ISO/ISS) is at odds with its principal degradative function and likely over-propagated.
Reason: Runs counter to Cbl's degradative role; likely over-annotation.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0050860 negative regulation of T cell receptor signaling pathway
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Cbl negatively regulates TCR signaling by ubiquitinating/downregulating proximal components (ZAP70, LAT, Src-family kinases); cell-type-specific instance of receptor downregulation.
Reason: Immune-specific instance of Cbl's negative receptor regulation; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0050868 negative regulation of T cell activation
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Cbl dampens TCR signaling (with SLA2/ZAP70) and thereby T-cell activation; an important but downstream, cell-type-specific consequence of its E3/adaptor role.
Reason: Pleiotropic immune-regulatory outcome; downstream of core E3 function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Phospho-Cbl recruits PI3K (e.g. Tyr-731 form in osteoclasts) promoting PI3K/AKT signaling; a context-specific positive role distinct from its main negative-regulator function.
Reason: Context-specific PI3K/AKT-promoting role; downstream, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Mechanistically, BLNK modulated c-Cbl phosphorylation and **PI3K-associated actin remodeling**, linking c-Cbl to cytoskeletal outputs required for renal macrophage recruitment.
GO:0061630 ubiquitin protein ligase activity
ISO
GO_REF:0000119
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0070534 protein K63-linked ubiquitination
ISO
GO_REF:0000119
MODIFY
Summary: K63-linked chains drive endocytic/trafficking fates not proteasomal degradation; supported only by IEA/ISO/ISS, so generalize to the well-supported parent protein ubiquitination rather than asserting a specific chain linkage for mouse Cbl.
Reason: Chain-linkage specificity is only electronically inferred; generalize to supported parent.
Proposed replacements: protein ubiquitination
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0097229 sperm end piece
ISO
GO_REF:0000119
KEEP AS NON CORE
Summary: Sperm end-piece localization (ISO only) is a highly tissue-specific finding unrelated to Cbl's core signaling-attenuation role.
Reason: Tissue-specific ISO localization; peripheral, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0000209 protein polyubiquitination
ISO
GO_REF:0000096
ACCEPT
Summary: Cbl multi/poly-ubiquitinates activated RTKs (e.g. CSF1R multiubiquitination), a documented degradative outcome of its ligase activity.
Reason: Specific, correct ubiquitin-chain type produced by Cbl on receptor substrates.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0005925 focal adhesion
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Focal-adhesion localization (IEA/ISO) fits Cbl's roles in adhesion/cytoskeletal signaling; a context-specific site rather than a core compartment.
Reason: Context-specific adhesion-site localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0006513 protein monoubiquitination
ISO
GO_REF:0000096
ACCEPT
Summary: Cbl also monoubiquitinates receptors, a recognized signal for endocytic sorting; a valid specific ubiquitination outcome of Cbl.
Reason: Documented mono-ubiquitination activity supporting receptor internalization.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0017124 SH3 domain binding
ISO
GO_REF:0000096
MARK AS OVER ANNOTATED
Summary: Reflects proline-rich-mediated recruitment of SH3-containing adaptors (Grb2, CD2AP/CIN85) but is a generic binding descriptor that does not convey Cbl's catalytic/adaptor role.
Reason: Generic binding MF; partner-specific adaptor links are captured elsewhere.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0019901 protein kinase binding
ISO
GO_REF:0000096
MARK AS OVER ANNOTATED
Summary: Redundant generic kinase-binding term superseded by the more specific protein/receptor tyrosine kinase binding annotations that describe Cbl's actual substrate recognition.
Reason: Generic and redundant with the specific tyrosine-kinase-binding MFs.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Axonal localization (IEA/ISO) is a neuronal-context site consistent with Eph-receptor regulation; not a core compartment for the E3/adaptor function.
Reason: Neuronal-context localization; specialized, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0030426 growth cone
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Growth-cone localization (IEA/ISO) reflects neuronal/cytoskeletal context (e.g. Eph signaling); peripheral specialized localization.
Reason: Neuronal context localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Phospho-Cbl interacts with PIK3R1 to recruit PI3K (UniProt SUBUNIT); a genuine partner interaction supporting PI3K coupling but downstream of Cbl's core E3 role.
Reason: Documented PIK3R1 interaction; secondary/effector partner binding, not core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Mechanistically, BLNK modulated c-Cbl phosphorylation and **PI3K-associated actin remodeling**, linking c-Cbl to cytoskeletal outputs required for renal macrophage recruitment.
GO:0043066 negative regulation of apoptotic process
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Cbl influences survival signaling (e.g. via PI3K/AKT) in some contexts (IEA/ISO); a pleiotropic downstream outcome, not a core mechanism.
Reason: Pleiotropic survival-signaling outcome; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A context-dependent signaling rheostat** in immune and myeloid cells, where adaptor networks (e.g., BLNK/Fyn/PI3K in CLR signaling) tune c-Cbl phosphorylation state and thereby cytoskeletal/migratory behavior and host defense.
GO:0048471 perinuclear region of cytoplasm
ISO
GO_REF:0000096
KEEP AS NON CORE
Summary: Perinuclear localization (IEA/ISO) is consistent with endosomal/recycling trafficking compartments; a sub-cytoplasmic refinement, non-core.
Reason: Sub-cytoplasmic trafficking-compartment localization; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0051865 protein autoubiquitination
ISO
GO_REF:0000096
ACCEPT
Summary: Cbl undergoes autoubiquitination (it is itself ubiquitinated leading to proteasomal turnover, per UniProt PTM), a genuine regulatory activity of the RING ligase.
Reason: Self-ubiquitination is a documented PTM/activity consistent with RING E3 function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0061630 ubiquitin protein ligase activity
ISO
GO_REF:0000096
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:1990782 protein tyrosine kinase binding
ISO
GO_REF:0000096
ACCEPT
Summary: Cbl binds activated tyrosine kinases (RTKs and SRC-family) through its TKB domain to target them for ubiquitination; a core, mechanistically central interaction MF.
Reason: Core adaptor MF β€” recognition of the tyrosine-kinase substrates Cbl downregulates.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**TKBD/TKB**: a composite domain comprising a **4-helix bundle**, **EF-hand**, and an **SH2-like phosphotyrosine-recognition module** that mediates binding to phosphorylated targets.
GO:0061630 ubiquitin protein ligase activity
TAS
Reactome:R-MMU-9763892
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0050821 protein stabilization
ISS
GO_REF:0000024
MARK AS OVER ANNOTATED
Summary: Cbl's core action is to destabilize/degrade its substrates; a 'protein stabilization' annotation (IEA/ISO/ISS) is at odds with its principal degradative function and likely over-propagated.
Reason: Runs counter to Cbl's degradative role; likely over-annotation.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0050860 negative regulation of T cell receptor signaling pathway
ISS
GO_REF:0000024
KEEP AS NON CORE
Summary: Cbl negatively regulates TCR signaling by ubiquitinating/downregulating proximal components (ZAP70, LAT, Src-family kinases); cell-type-specific instance of receptor downregulation.
Reason: Immune-specific instance of Cbl's negative receptor regulation; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0050868 negative regulation of T cell activation
ISS
GO_REF:0000024
KEEP AS NON CORE
Summary: Cbl dampens TCR signaling (with SLA2/ZAP70) and thereby T-cell activation; an important but downstream, cell-type-specific consequence of its E3/adaptor role.
Reason: Pleiotropic immune-regulatory outcome; downstream of core E3 function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
A 2024 immune-focused review summarizes that Cbl-family E3 ligases ubiquitinate and downregulate proximal signaling components including **TCR/CD3 subunits**, Src-family kinases **Fyn** and **Lck**, the adaptor **LAT**, and other pathway components in T and NK cells.
GO:0061630 ubiquitin protein ligase activity
ISS
GO_REF:0000024
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0070534 protein K63-linked ubiquitination
ISS
GO_REF:0000024
MODIFY
Summary: K63-linked chains drive endocytic/trafficking fates not proteasomal degradation; supported only by IEA/ISO/ISS, so generalize to the well-supported parent protein ubiquitination rather than asserting a specific chain linkage for mouse Cbl.
Reason: Chain-linkage specificity is only electronically inferred; generalize to supported parent.
Proposed replacements: protein ubiquitination
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IMP
PMID:12754251
Cbl-mediated ubiquitinylation is required for lysosomal sort...
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0061630 ubiquitin protein ligase activity
IMP
PMID:15962011
Sprouty2 acts at the Cbl/CIN85 interface to inhibit epiderma...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0005886 plasma membrane
IDA
PMID:15383614
c-Cbl directs EGF receptors into an endocytic pathway that i...
ACCEPT
Summary: Cbl is recruited to activated receptors at the plasma membrane where it ubiquitinates them (IDA:MGI); a core functional location.
Reason: Site where Cbl engages activated membrane receptors; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0016567 protein ubiquitination
ISO
PMID:11823423
A mutant EGF-receptor defective in ubiquitylation and endocy...
ACCEPT
Summary: Core BP capturing Cbl's central activity of conjugating ubiquitin to substrate proteins (IDA:MGI); directly downstream of its E3 ligase MF.
Reason: Direct experimental annotation of Cbl's core ubiquitination process.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IGI
PMID:11823423
A mutant EGF-receptor defective in ubiquitylation and endocy...
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0061630 ubiquitin protein ligase activity
IGI
PMID:11823423
A mutant EGF-receptor defective in ubiquitylation and endocy...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0061630 ubiquitin protein ligase activity
IMP
PMID:12754251
Cbl-mediated ubiquitinylation is required for lysosomal sort...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0070086 ubiquitin-dependent endocytosis
ISO
PMID:11823423
A mutant EGF-receptor defective in ubiquitylation and endocy...
ACCEPT
Summary: Core BP: Cbl ubiquitination of activated receptors couples them to the endocytic machinery for internalization (IMP:MGI), the adaptor/trafficking arm of its function.
Reason: Directly links Cbl ubiquitination to receptor endocytosis; core trafficking role.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0006511 ubiquitin-dependent protein catabolic process
IMP
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Core BP: Cbl-mediated ubiquitination routes substrate receptors to proteasomal/lysosomal degradation, terminating signaling (IMP:MGI).
Reason: Core outcome of Cbl ubiquitination β€” substrate degradation; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0016567 protein ubiquitination
IDA
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Core BP capturing Cbl's central activity of conjugating ubiquitin to substrate proteins (IDA:MGI); directly downstream of its E3 ligase MF.
Reason: Direct experimental annotation of Cbl's core ubiquitination process.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IDA
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
IMP
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0061630 ubiquitin protein ligase activity
IDA
PMID:15383614
c-Cbl directs EGF receptors into an endocytic pathway that i...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0061630 ubiquitin protein ligase activity
IDA
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0061630 ubiquitin protein ligase activity
IMP
PMID:23457600
Berberine inhibits proliferation and down-regulates epiderma...
ACCEPT
Summary: Core catalytic MF: RING-type E3 ligase that recruits E2~ubiquitin via its RING finger and transfers ubiquitin to activated receptor substrates; strongly supported (IDA:MGI plus IBA/IMP/ISS/TAS).
Reason: Best-supported core molecular function with direct experimental evidence.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0070086 ubiquitin-dependent endocytosis
IMP
PMID:15383614
c-Cbl directs EGF receptors into an endocytic pathway that i...
ACCEPT
Summary: Core BP: Cbl ubiquitination of activated receptors couples them to the endocytic machinery for internalization (IMP:MGI), the adaptor/trafficking arm of its function.
Reason: Directly links Cbl ubiquitination to receptor endocytosis; core trafficking role.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0016600 flotillin complex
IDA
PMID:11001060
CAP defines a second signalling pathway required for insulin...
KEEP AS NON CORE
Summary: Association with the flotillin complex (IDA:BHF-UCL) reflects membrane-microdomain/endocytic context; a real but peripheral complex membership.
Reason: Specific microdomain complex membership; peripheral to core function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:0005515 protein binding
IPI
PMID:9447983
A novel, multifuntional c-Cbl binding protein in insulin rec...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005829 cytosol
TAS
Reactome:R-MMU-9680646
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9680706
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9682158
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9682182
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9763891
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9763892
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0005829 cytosol
TAS
Reactome:R-MMU-9817994
ACCEPT
Summary: Cbl is a baseline cytosolic adaptor/E3 (TAS:Reactome and ISO), recruited from the cytosol to activated membrane receptor complexes; a core site of action.
Reason: Primary baseline localization of the cytosolic adaptor/E3; well supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best viewed as a **cytosolic adaptor/E3** that is recruited to **activated plasma-membrane signaling complexes** and subsequently to **endocytic/endosomal trafficking sites**, where it ubiquitinates receptors and associated proteins to direct trafficking fate
GO:0016567 protein ubiquitination
ISS
GO_REF:0000024
ACCEPT
Summary: Core BP capturing Cbl's central activity of conjugating ubiquitin to substrate proteins (IDA:MGI); directly downstream of its E3 ligase MF.
Reason: Direct experimental annotation of Cbl's core ubiquitination process.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).
GO:0032487 regulation of Rap protein signal transduction
IMP
PMID:12671687
Negative regulation of Rap1 activation by the Cbl E3 ubiquit...
KEEP AS NON CORE
Summary: Cbl modulates Rap GTPase signaling (IMP), plausibly via C3G/CrkL adaptor complexes; a specific but downstream signaling-regulation role.
Reason: Specific downstream small-GTPase signaling regulation; non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**A context-dependent signaling rheostat** in immune and myeloid cells, where adaptor networks (e.g., BLNK/Fyn/PI3K in CLR signaling) tune c-Cbl phosphorylation state and thereby cytoskeletal/migratory behavior and host defense.
GO:0005794 Golgi apparatus
IDA
PMID:29237719
IFT20 modulates ciliary PDGFRΞ± signaling by regulating the s...
KEEP AS NON CORE
Summary: Reported Golgi localization (IDA:UniProtKB; PubMed:29237719) in the ciliary PDGFRA context; a genuine secondary compartment, not Cbl's principal site of action.
Reason: Documented but secondary localization; keep as non-core (do not remove a sourced IDA).
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
IDA
PMID:29237719
IFT20 modulates ciliary PDGFRΞ± signaling by regulating the s...
KEEP AS NON CORE
Summary: Cbl localizes to the primary cilium where it regulates ciliary PDGFRA signaling (IDA:UniProtKB; PubMed:29237719); a real but context-specific localization.
Reason: Genuine ciliary localization tied to PDGFRA feedback; specialized, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In macrophages it also associates with F-actin/podosome-related structures during migration signaling.
GO:2000583 regulation of platelet-derived growth factor receptor-alpha signaling pathway
IMP
PMID:29237719
IFT20 modulates ciliary PDGFRΞ± signaling by regulating the s...
ACCEPT
Summary: Cbl (with Cbl-b) provides feedback inhibition of ciliary PDGFRA signaling via PDGFRA ubiquitination and internalization (IMP:UniProtKB; PubMed:29237719).
Reason: Specific, experimentally supported PDGFRA negative-feedback role; mirrors UniProt FUNCTION.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-family ubiquitination of activated RTKs (EGFR paradigm) is a central, experimentally grounded function that links phosphorylation-dependent recognition to endosomal sorting and receptor downregulation.
GO:0005515 protein binding
IPI
PMID:8551236
Association of tyrosine protein kinase Zap-70 with the proto...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:21830225
SH3KBP1-binding protein 1 prevents epidermal growth factor r...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0006511 ubiquitin-dependent protein catabolic process
ISS
GO_REF:0000024
ACCEPT
Summary: Core BP: Cbl-mediated ubiquitination routes substrate receptors to proteasomal/lysosomal degradation, terminating signaling (IMP:MGI).
Reason: Core outcome of Cbl ubiquitination β€” substrate degradation; experimentally supported.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation
GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway
ISS
GO_REF:0000024
ACCEPT
Summary: Archetypal core role: Cbl ubiquitinates activated EGFR to drive its endosomal/lysosomal sorting and signal termination (IDA:MGI plus IBA/IMP/IGI/ISS).
Reason: Canonical, experimentally grounded negative-feedback role on EGFR signaling.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**EGFR** is a canonical substrate/target: Cbl-mediated ubiquitination is required for efficient **lysosomal sorting/degradation** of EGFR after ligand stimulation; direct binding can occur via EGFR **pY1045** to the Cbl TKB domain, with an alternative Grb2-mediated route.
GO:0048260 positive regulation of receptor-mediated endocytosis
ISS
GO_REF:0000024
ACCEPT
Summary: Cbl promotes ligand-induced internalization of its RTK substrates (e.g. CSF1R multiubiquitination and endocytosis); a core adaptor/trafficking function (ISS).
Reason: Cbl actively drives receptor internalization β€” core downregulation mechanism.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
c-Cbl is best understood as an **activation-dependent negative regulator** of signaling that couples recognition of **phosphotyrosine-containing activated signaling complexes** to **ubiquitin-dependent downregulation** (often routing to lysosomes for receptor degradation) and/or **proteasomal degradation** of signaling proteins.
GO:0005515 protein binding
IPI
PMID:11152963
SETA is a multifunctional adapter protein with three SH3 dom...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0005515 protein binding
IPI
PMID:16455755
Spatial and temporal regulation of GLUT4 translocation by fl...
MARK AS OVER ANNOTATED
Summary: Bare 'protein binding' (12x IPI) is uninformative; Cbl's meaningful interactions are captured by specific phosphotyrosine/kinase-binding terms and named-partner annotations.
Reason: Generic protein binding conveys no functional information; always over-annotated.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).
GO:0046875 ephrin receptor binding
IPI
PMID:18034775
Ligand binding induces Cbl-dependent EphB1 receptor degradat...
KEEP AS NON CORE
Summary: Cbl binds Eph receptors (EPHB1, EPHA8) to drive their ubiquitination/degradation (IPI); a real but substrate-specific interaction, an instance of its general RTK-binding role.
Reason: Real specific RTK interaction; non-core instance of the general substrate-binding function.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Receptor tyrosine kinases (RTKs)
GO:0006468 protein phosphorylation
ISS
GO_REF:0000024
REMOVE
Summary: Cbl is a ubiquitin ligase, not a protein kinase; it is phosphorylated BY kinases but does not catalyze protein phosphorylation. This ISS annotation reverses the direction of the modification and is incorrect.
Reason: Cbl has no kinase activity; annotation contradicts its biochemistry (it is a substrate, not a kinase).
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
Cbl-family proteins are **RING-type E3 ligases**, meaning they **do not form a catalytic ubiquitin thioester intermediate**; instead, they bring an **E2~ubiquitin conjugate** into proximity with the substrate to enable transfer.
GO:0045453 bone resorption
ISS
GO_REF:0000024
KEEP AS NON CORE
Summary: Cbl is required for osteoclastic bone resorption (ISS; UniProt FUNCTION); an important tissue-level physiological role downstream of its signaling functions.
Reason: Tissue-level osteoclast physiology; downstream, non-core.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
In intestine, c-Cbl and Cbl-b are partly redundant
GO:0017124 SH3 domain binding
IPI
PMID:9447983
A novel, multifuntional c-Cbl binding protein in insulin rec...
MARK AS OVER ANNOTATED
Summary: Reflects proline-rich-mediated recruitment of SH3-containing adaptors (Grb2, CD2AP/CIN85) but is a generic binding descriptor that does not convey Cbl's catalytic/adaptor role.
Reason: Generic binding MF; partner-specific adaptor links are captured elsewhere.
Supporting Evidence:
UniProt:P22682
FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
file:mouse/Cbl/Cbl-deep-research-falcon.md
**Indirect recruitment through adaptors** (e.g., Grb2 linking EGFR to Cbl via Grb2 SH2–pEGFR and Grb2 SH3–Cbl proline-rich interactions).

Core Functions

Transfers ubiquitin to activated receptor tyrosine kinases and signaling substrates to attenuate signaling and promote receptor downregulation.

Supporting Evidence:
  • UniProt:P22682
    FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
  • file:mouse/Cbl/Cbl-deep-research-falcon.md
    c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).

The TKB/phosphotyrosine-binding region recognizes activated receptor tyrosine kinases, positioning the RING E3 ligase domain for substrate ubiquitination.

Supporting Evidence:
  • UniProt:P22682
    FUNCTION: E3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors. Recognizes activated receptor tyrosine kinases and mediates their ubiquitination to terminate signaling. CATALYTIC ACTIVITY: transfers ubiquitin from E2 ubiquitin-conjugating enzyme to acceptor protein lysine. DOMAIN: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme; the N-terminus includes a phosphotyrosine binding/TKB domain.
  • file:mouse/Cbl/Cbl-deep-research-falcon.md
    c-Cbl catalyzes **transfer of ubiquitin from an E2~ubiquitin conjugate to lysine residues on substrate proteins** (E3 ubiquitin ligase activity), leading to mono- or polyubiquitination with downstream consequences (endocytosis/endosomal sorting, lysosomal degradation, proteasomal degradation, or signaling rewiring depending on context).

References

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