TODO: Add description for Cdk5r1
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007420
brain development
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007411
axon guidance
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019901
protein kinase binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030426
growth cone
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016533
protein kinase 5 complex
|
IEA
GO_REF:0000002 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0021722
superior olivary nucleus maturation
|
IEA
GO_REF:0000117 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0021819
layer formation in cerebral cortex
|
IEA
GO_REF:0000117 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043005
neuron projection
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043204
perikaryon
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048511
rhythmic process
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:17341134 Cdk5 is involved in BDNF-stimulated dendritic growth in hipp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17341134
Cdk5 is involved in BDNF-stimulated dendritic growth in hippocampal neurons.
|
|
GO:0005515
protein binding
|
IPI
PMID:18325333 CDK5 activator p35 downregulates E-cadherin precursor indepe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18325333
Epub 2008 Mar 4. CDK5 activator p35 downregulates E-cadherin precursor independently of CDK5.
|
|
GO:0005515
protein binding
|
IPI
PMID:24561619 Role of the SIK2-p35-PJA2 complex in pancreatic β-cell funct... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24561619
Role of the SIK2-p35-PJA2 complex in pancreatic β-cell functional compensation.
|
|
GO:0016533
protein kinase 5 complex
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019901
protein kinase binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043539
protein serine/threonine kinase activator activity
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0018105
peptidyl-serine phosphorylation
|
ISO
GO_REF:0000119 |
MODIFY |
Summary: OVER-ANNOTATION: Cdk5r1 (p35) does NOT catalyze phosphorylation itself - it is a "neuron specific activator of CDK5" (UniProt). UniProt explicitly states "Only the heterodimer shows kinase activity." The kinase activity belongs to CDK5, not to p35. The correct annotation should be to kinase activator activity (GO:0061575 already annotated via IMP) rather than the phosphorylation process.
Proposed replacements:
regulation of protein kinase activity
|
|
GO:0018107
peptidyl-threonine phosphorylation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0000307
cyclin-dependent protein kinase holoenzyme complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005509
calcium ion binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007213
G protein-coupled acetylcholine receptor signaling pathway
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0009792
embryo development ending in birth or egg hatching
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0014069
postsynaptic density
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016020
membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016301
kinase activity
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016533
protein kinase 5 complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019901
protein kinase binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019901
protein kinase binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030182
neuron differentiation
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030424
axon
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030425
dendrite
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030426
growth cone
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031175
neuron projection development
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031594
neuromuscular junction
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0035235
ionotropic glutamate receptor signaling pathway
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043025
neuronal cell body
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043197
dendritic spine
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043292
contractile muscle fiber
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043525
positive regulation of neuron apoptotic process
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043539
protein serine/threonine kinase activator activity
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043539
protein serine/threonine kinase activator activity
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045348
positive regulation of MHC class II biosynthetic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0046875
ephrin receptor binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0098693
regulation of synaptic vesicle cycle
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0098793
presynapse
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1903265
positive regulation of tumor necrosis factor-mediated signaling pathway
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9634937 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070315
G1 to G0 transition involved in cell differentiation
|
IMP
PMID:21566658 A novel RING finger protein, Znf179, modulates cell cycle ex... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21566658
2011 May 13. A novel RING finger protein, Znf179, modulates cell cycle exit and neuronal differentiation of P19 embryonal carcinoma cells.
|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
IMP
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0061575
cyclin-dependent protein serine/threonine kinase activator activity
|
TAS
PMID:12516540 The TGF-beta response to Leishmania chagasi in the absence o... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12516540
The TGF-beta response to Leishmania chagasi in the absence of IL-12.
|
|
GO:0009792
embryo development ending in birth or egg hatching
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0003779
actin binding
|
IPI
PMID:19118186 Spatial learning impairment, enhanced CDK5/p35 activity, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19118186
Spatial learning impairment, enhanced CDK5/p35 activity, and downregulation of NMDA receptor expression in transgenic mice expressing tau-tubulin kinase 1.
|
|
GO:0002020
protease binding
|
IPI
PMID:19118186 Spatial learning impairment, enhanced CDK5/p35 activity, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19118186
Spatial learning impairment, enhanced CDK5/p35 activity, and downregulation of NMDA receptor expression in transgenic mice expressing tau-tubulin kinase 1.
|
|
GO:0019901
protein kinase binding
|
IPI
PMID:19118186 Spatial learning impairment, enhanced CDK5/p35 activity, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19118186
Spatial learning impairment, enhanced CDK5/p35 activity, and downregulation of NMDA receptor expression in transgenic mice expressing tau-tubulin kinase 1.
|
|
GO:0035255
ionotropic glutamate receptor binding
|
IPI
PMID:19118186 Spatial learning impairment, enhanced CDK5/p35 activity, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19118186
Spatial learning impairment, enhanced CDK5/p35 activity, and downregulation of NMDA receptor expression in transgenic mice expressing tau-tubulin kinase 1.
|
|
GO:0051015
actin filament binding
|
IPI
PMID:19118186 Spatial learning impairment, enhanced CDK5/p35 activity, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19118186
Spatial learning impairment, enhanced CDK5/p35 activity, and downregulation of NMDA receptor expression in transgenic mice expressing tau-tubulin kinase 1.
|
|
GO:0042501
serine phosphorylation of STAT protein
|
IDA
PMID:15096606 Cyclin-dependent kinase 5 phosphorylates signal transducer a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15096606
Cyclin-dependent kinase 5 phosphorylates signal transducer and activator of transcription 3 and regulates its transcriptional activity.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-8868356 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-8868383 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-MMU-8863416 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-MMU-8868331 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-MMU-8868583 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-MMU-8868589 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-MMU-8868677 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-8870566 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-8863416 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:18054859 Cdk5 promotes synaptogenesis by regulating the subcellular d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18054859
Cdk5 promotes synaptogenesis by regulating the subcellular distribution of the MAGUK family member CASK.
|
|
GO:0090314
positive regulation of protein targeting to membrane
|
IDA
PMID:18054859 Cdk5 promotes synaptogenesis by regulating the subcellular d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18054859
Cdk5 promotes synaptogenesis by regulating the subcellular distribution of the MAGUK family member CASK.
|
|
GO:0001764
neuron migration
|
IGI
PMID:11226314 Synergistic contributions of cyclin-dependant kinase 5/p35 a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11226314
Synergistic contributions of cyclin-dependant kinase 5/p35 and Reelin/Dab1 to the positioning of cortical neurons in the developing mouse brain.
|
|
GO:0001764
neuron migration
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0005515
protein binding
|
IPI
PMID:15096606 Cyclin-dependent kinase 5 phosphorylates signal transducer a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15096606
Cyclin-dependent kinase 5 phosphorylates signal transducer and activator of transcription 3 and regulates its transcriptional activity.
|
|
GO:0005515
protein binding
|
IPI
PMID:15489224 Cdk5/p35 phosphorylates mSds3 and regulates mSds3-mediated r... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15489224
2004 Oct 15. Cdk5/p35 phosphorylates mSds3 and regulates mSds3-mediated repression of transcription.
|
|
GO:0005515
protein binding
|
IPI
PMID:17529984 Cyclin-dependent kinase 5 governs learning and synaptic plas... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17529984
Cyclin-dependent kinase 5 governs learning and synaptic plasticity via control of NMDAR degradation.
|
|
GO:0005515
protein binding
|
IPI
PMID:17591690 Stabilization and activation of p53 induced by Cdk5 contribu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17591690
Stabilization and activation of p53 induced by Cdk5 contributes to neuronal cell death.
|
|
GO:0005634
nucleus
|
IDA
PMID:15096606 Cyclin-dependent kinase 5 phosphorylates signal transducer a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15096606
Cyclin-dependent kinase 5 phosphorylates signal transducer and activator of transcription 3 and regulates its transcriptional activity.
|
|
GO:0005634
nucleus
|
IDA
PMID:17591690 Stabilization and activation of p53 induced by Cdk5 contribu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17591690
Stabilization and activation of p53 induced by Cdk5 contributes to neuronal cell death.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:15123626 Cyclin-dependent kinase 5 associated with p39 promotes Munc1... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15123626
2004 Apr 26. Cyclin-dependent kinase 5 associated with p39 promotes Munc18-1 phosphorylation and Ca(2+)-dependent exocytosis.
|
|
GO:0021549
cerebellum development
|
IMP
PMID:11226314 Synergistic contributions of cyclin-dependant kinase 5/p35 a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11226314
Synergistic contributions of cyclin-dependant kinase 5/p35 and Reelin/Dab1 to the positioning of cortical neurons in the developing mouse brain.
|
|
GO:0021549
cerebellum development
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0021722
superior olivary nucleus maturation
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0021766
hippocampus development
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0021819
layer formation in cerebral cortex
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0045860
positive regulation of protein kinase activity
|
IGI
PMID:11517264 p35 and p39 are essential for cyclin-dependent kinase 5 func... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11517264
p35 and p39 are essential for cyclin-dependent kinase 5 function during neurodevelopment.
|
|
GO:0005515
protein binding
|
IPI
PMID:17143272 Cdk5 regulates EphA4-mediated dendritic spine retraction thr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17143272
Cdk5 regulates EphA4-mediated dendritic spine retraction through an ephexin1-dependent mechanism.
|
|
GO:0014069
postsynaptic density
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048013
ephrin receptor signaling pathway
|
IMP
PMID:17143272 Cdk5 regulates EphA4-mediated dendritic spine retraction thr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17143272
Cdk5 regulates EphA4-mediated dendritic spine retraction through an ephexin1-dependent mechanism.
|
|
GO:0061001
regulation of dendritic spine morphogenesis
|
IMP
PMID:17143272 Cdk5 regulates EphA4-mediated dendritic spine retraction thr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17143272
Cdk5 regulates EphA4-mediated dendritic spine retraction through an ephexin1-dependent mechanism.
|
|
GO:0021799
cerebral cortex radially oriented cell migration
|
IMP
PMID:20624590 Dixdc1 is a critical regulator of DISC1 and embryonic cortic... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20624590
Dixdc1 is a critical regulator of DISC1 and embryonic cortical development.
|
|
GO:0032956
regulation of actin cytoskeleton organization
|
IMP
PMID:20624590 Dixdc1 is a critical regulator of DISC1 and embryonic cortic... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20624590
Dixdc1 is a critical regulator of DISC1 and embryonic cortical development.
|
|
GO:0070507
regulation of microtubule cytoskeleton organization
|
IMP
PMID:20624590 Dixdc1 is a critical regulator of DISC1 and embryonic cortic... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20624590
Dixdc1 is a critical regulator of DISC1 and embryonic cortical development.
|
|
GO:0005515
protein binding
|
IPI
PMID:11276227 Cdk5 is involved in neuregulin-induced AChR expression at th... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11276227
Cdk5 is involved in neuregulin-induced AChR expression at the neuromuscular junction.
|
|
GO:0007213
G protein-coupled acetylcholine receptor signaling pathway
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0001764
neuron migration
|
IDA
PMID:9010203 Mice lacking p35, a neuronal specific activator of Cdk5, dis... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9010203
Mice lacking p35, a neuronal specific activator of Cdk5, display cortical lamination defects, seizures, and adult lethality.
|
|
GO:0005509
calcium ion binding
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007158
neuron cell-cell adhesion
|
IMP
PMID:10753743 Regulation of N-cadherin-mediated adhesion by the p35-Cdk5 k... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10753743
Regulation of N-cadherin-mediated adhesion by the p35-Cdk5 kinase.
|
|
GO:0007411
axon guidance
|
IMP
PMID:10545161 Callosal axon guidance defects in p35(-/-) mice. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10545161
Callosal axon guidance defects in p35(-/-) mice.
|
|
GO:0007413
axonal fasciculation
|
IMP
PMID:10545161 Callosal axon guidance defects in p35(-/-) mice. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10545161
Callosal axon guidance defects in p35(-/-) mice.
|
|
GO:0007420
brain development
|
IMP
PMID:10545161 Callosal axon guidance defects in p35(-/-) mice. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10545161
Callosal axon guidance defects in p35(-/-) mice.
|
|
GO:0016020
membrane
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016301
kinase activity
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030182
neuron differentiation
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030424
axon
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030425
dendrite
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030426
growth cone
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031175
neuron projection development
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031594
neuromuscular junction
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0035235
ionotropic glutamate receptor signaling pathway
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043025
neuronal cell body
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043197
dendritic spine
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043292
contractile muscle fiber
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043525
positive regulation of neuron apoptotic process
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043539
protein serine/threonine kinase activator activity
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:12496365 CDK5 regulates cell adhesion and migration in corneal epithe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12496365
CDK5 regulates cell adhesion and migration in corneal epithelial cells.
|
|
GO:0008092
cytoskeletal protein binding
|
TAS
PMID:12496365 CDK5 regulates cell adhesion and migration in corneal epithe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12496365
CDK5 regulates cell adhesion and migration in corneal epithelial cells.
|
id: P61809
gene_symbol: Cdk5r1
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:10090
label: Mus musculus
description: 'TODO: Add description for Cdk5r1'
existing_annotations:
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007420
label: brain development
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007411
label: axon guidance
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030426
label: growth cone
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016533
label: protein kinase 5 complex
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0021722
label: superior olivary nucleus maturation
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0021819
label: layer formation in cerebral cortex
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043005
label: neuron projection
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043204
label: perikaryon
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048511
label: rhythmic process
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17341134
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17341134
supporting_text: Cdk5 is involved in BDNF-stimulated dendritic growth
in hippocampal neurons.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18325333
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18325333
supporting_text: Epub 2008 Mar 4. CDK5 activator p35 downregulates
E-cadherin precursor independently of CDK5.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24561619
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24561619
supporting_text: Role of the SIK2-p35-PJA2 complex in pancreatic
β-cell functional compensation.
- term:
id: GO:0016533
label: protein kinase 5 complex
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043539
label: protein serine/threonine kinase activator activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0018105
label: peptidyl-serine phosphorylation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
OVER-ANNOTATION: Cdk5r1 (p35) does NOT catalyze phosphorylation itself - it
is
a "neuron specific activator of CDK5" (UniProt). UniProt explicitly states
"Only
the heterodimer shows kinase activity." The kinase activity belongs to CDK5,
not
to p35. The correct annotation should be to kinase activator activity (GO:0061575
already annotated via IMP) rather than the phosphorylation process.
action: MODIFY
proposed_replacement_terms:
- id: GO:0045859
label: regulation of protein kinase activity
- term:
id: GO:0018107
label: peptidyl-threonine phosphorylation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0000307
label: cyclin-dependent protein kinase holoenzyme complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005509
label: calcium ion binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007213
label: G protein-coupled acetylcholine receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0009792
label: embryo development ending in birth or egg hatching
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0014069
label: postsynaptic density
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016020
label: membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016301
label: kinase activity
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016533
label: protein kinase 5 complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030182
label: neuron differentiation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030424
label: axon
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030425
label: dendrite
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030426
label: growth cone
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031175
label: neuron projection development
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031594
label: neuromuscular junction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0035235
label: ionotropic glutamate receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043025
label: neuronal cell body
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043197
label: dendritic spine
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043292
label: contractile muscle fiber
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043525
label: positive regulation of neuron apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043539
label: protein serine/threonine kinase activator activity
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043539
label: protein serine/threonine kinase activator activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045348
label: positive regulation of MHC class II biosynthetic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0046875
label: ephrin receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098693
label: regulation of synaptic vesicle cycle
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098793
label: presynapse
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1903265
label: positive regulation of tumor necrosis factor-mediated signaling
pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9634937
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070315
label: G1 to G0 transition involved in cell differentiation
evidence_type: IMP
original_reference_id: PMID:21566658
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21566658
supporting_text: 2011 May 13. A novel RING finger protein, Znf179,
modulates cell cycle exit and neuronal differentiation of P19
embryonal carcinoma cells.
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: IMP
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0061575
label: cyclin-dependent protein serine/threonine kinase activator activity
evidence_type: TAS
original_reference_id: PMID:12516540
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12516540
supporting_text: The TGF-beta response to Leishmania chagasi in the
absence of IL-12.
- term:
id: GO:0009792
label: embryo development ending in birth or egg hatching
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0003779
label: actin binding
evidence_type: IPI
original_reference_id: PMID:19118186
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19118186
supporting_text: Spatial learning impairment, enhanced CDK5/p35
activity, and downregulation of NMDA receptor expression in
transgenic mice expressing tau-tubulin kinase 1.
- term:
id: GO:0002020
label: protease binding
evidence_type: IPI
original_reference_id: PMID:19118186
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19118186
supporting_text: Spatial learning impairment, enhanced CDK5/p35
activity, and downregulation of NMDA receptor expression in
transgenic mice expressing tau-tubulin kinase 1.
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IPI
original_reference_id: PMID:19118186
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19118186
supporting_text: Spatial learning impairment, enhanced CDK5/p35
activity, and downregulation of NMDA receptor expression in
transgenic mice expressing tau-tubulin kinase 1.
- term:
id: GO:0035255
label: ionotropic glutamate receptor binding
evidence_type: IPI
original_reference_id: PMID:19118186
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19118186
supporting_text: Spatial learning impairment, enhanced CDK5/p35
activity, and downregulation of NMDA receptor expression in
transgenic mice expressing tau-tubulin kinase 1.
- term:
id: GO:0051015
label: actin filament binding
evidence_type: IPI
original_reference_id: PMID:19118186
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19118186
supporting_text: Spatial learning impairment, enhanced CDK5/p35
activity, and downregulation of NMDA receptor expression in
transgenic mice expressing tau-tubulin kinase 1.
- term:
id: GO:0042501
label: serine phosphorylation of STAT protein
evidence_type: IDA
original_reference_id: PMID:15096606
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15096606
supporting_text: Cyclin-dependent kinase 5 phosphorylates signal
transducer and activator of transcription 3 and regulates its
transcriptional activity.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868356
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868383
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8863416
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868331
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868583
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868589
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8868677
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-8870566
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-8863416
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18054859
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18054859
supporting_text: Cdk5 promotes synaptogenesis by regulating the
subcellular distribution of the MAGUK family member CASK.
- term:
id: GO:0090314
label: positive regulation of protein targeting to membrane
evidence_type: IDA
original_reference_id: PMID:18054859
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18054859
supporting_text: Cdk5 promotes synaptogenesis by regulating the
subcellular distribution of the MAGUK family member CASK.
- term:
id: GO:0001764
label: neuron migration
evidence_type: IGI
original_reference_id: PMID:11226314
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11226314
supporting_text: Synergistic contributions of cyclin-dependant kinase
5/p35 and Reelin/Dab1 to the positioning of cortical neurons in the
developing mouse brain.
- term:
id: GO:0001764
label: neuron migration
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15096606
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15096606
supporting_text: Cyclin-dependent kinase 5 phosphorylates signal
transducer and activator of transcription 3 and regulates its
transcriptional activity.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15489224
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15489224
supporting_text: 2004 Oct 15. Cdk5/p35 phosphorylates mSds3 and
regulates mSds3-mediated repression of transcription.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17529984
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17529984
supporting_text: Cyclin-dependent kinase 5 governs learning and
synaptic plasticity via control of NMDAR degradation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17591690
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17591690
supporting_text: Stabilization and activation of p53 induced by Cdk5
contributes to neuronal cell death.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15096606
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15096606
supporting_text: Cyclin-dependent kinase 5 phosphorylates signal
transducer and activator of transcription 3 and regulates its
transcriptional activity.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:17591690
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17591690
supporting_text: Stabilization and activation of p53 induced by Cdk5
contributes to neuronal cell death.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:15123626
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15123626
supporting_text: 2004 Apr 26. Cyclin-dependent kinase 5 associated
with p39 promotes Munc18-1 phosphorylation and Ca(2+)-dependent
exocytosis.
- term:
id: GO:0021549
label: cerebellum development
evidence_type: IMP
original_reference_id: PMID:11226314
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11226314
supporting_text: Synergistic contributions of cyclin-dependant kinase
5/p35 and Reelin/Dab1 to the positioning of cortical neurons in the
developing mouse brain.
- term:
id: GO:0021549
label: cerebellum development
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0021722
label: superior olivary nucleus maturation
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0021766
label: hippocampus development
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0021819
label: layer formation in cerebral cortex
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0045860
label: positive regulation of protein kinase activity
evidence_type: IGI
original_reference_id: PMID:11517264
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11517264
supporting_text: p35 and p39 are essential for cyclin-dependent kinase
5 function during neurodevelopment.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17143272
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17143272
supporting_text: Cdk5 regulates EphA4-mediated dendritic spine
retraction through an ephexin1-dependent mechanism.
- term:
id: GO:0014069
label: postsynaptic density
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048013
label: ephrin receptor signaling pathway
evidence_type: IMP
original_reference_id: PMID:17143272
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17143272
supporting_text: Cdk5 regulates EphA4-mediated dendritic spine
retraction through an ephexin1-dependent mechanism.
- term:
id: GO:0061001
label: regulation of dendritic spine morphogenesis
evidence_type: IMP
original_reference_id: PMID:17143272
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17143272
supporting_text: Cdk5 regulates EphA4-mediated dendritic spine
retraction through an ephexin1-dependent mechanism.
- term:
id: GO:0021799
label: cerebral cortex radially oriented cell migration
evidence_type: IMP
original_reference_id: PMID:20624590
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20624590
supporting_text: Dixdc1 is a critical regulator of DISC1 and embryonic
cortical development.
- term:
id: GO:0032956
label: regulation of actin cytoskeleton organization
evidence_type: IMP
original_reference_id: PMID:20624590
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20624590
supporting_text: Dixdc1 is a critical regulator of DISC1 and embryonic
cortical development.
- term:
id: GO:0070507
label: regulation of microtubule cytoskeleton organization
evidence_type: IMP
original_reference_id: PMID:20624590
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20624590
supporting_text: Dixdc1 is a critical regulator of DISC1 and embryonic
cortical development.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11276227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11276227
supporting_text: Cdk5 is involved in neuregulin-induced AChR
expression at the neuromuscular junction.
- term:
id: GO:0007213
label: G protein-coupled acetylcholine receptor signaling pathway
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0001764
label: neuron migration
evidence_type: IDA
original_reference_id: PMID:9010203
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9010203
supporting_text: Mice lacking p35, a neuronal specific activator of
Cdk5, display cortical lamination defects, seizures, and adult
lethality.
- term:
id: GO:0005509
label: calcium ion binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007158
label: neuron cell-cell adhesion
evidence_type: IMP
original_reference_id: PMID:10753743
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10753743
supporting_text: Regulation of N-cadherin-mediated adhesion by the
p35-Cdk5 kinase.
- term:
id: GO:0007411
label: axon guidance
evidence_type: IMP
original_reference_id: PMID:10545161
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10545161
supporting_text: Callosal axon guidance defects in p35(-/-) mice.
- term:
id: GO:0007413
label: axonal fasciculation
evidence_type: IMP
original_reference_id: PMID:10545161
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10545161
supporting_text: Callosal axon guidance defects in p35(-/-) mice.
- term:
id: GO:0007420
label: brain development
evidence_type: IMP
original_reference_id: PMID:10545161
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10545161
supporting_text: Callosal axon guidance defects in p35(-/-) mice.
- term:
id: GO:0016020
label: membrane
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016301
label: kinase activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030182
label: neuron differentiation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030424
label: axon
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030425
label: dendrite
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030426
label: growth cone
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031175
label: neuron projection development
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031594
label: neuromuscular junction
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0035235
label: ionotropic glutamate receptor signaling pathway
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043025
label: neuronal cell body
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043197
label: dendritic spine
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043292
label: contractile muscle fiber
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043525
label: positive regulation of neuron apoptotic process
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043539
label: protein serine/threonine kinase activator activity
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12496365
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12496365
supporting_text: CDK5 regulates cell adhesion and migration in corneal
epithelial cells.
- term:
id: GO:0008092
label: cytoskeletal protein binding
evidence_type: TAS
original_reference_id: PMID:12496365
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12496365
supporting_text: CDK5 regulates cell adhesion and migration in corneal
epithelial cells.
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with
GO terms
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data
to orthologs by curator judgment of sequence similarity
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular
Location vocabulary mapping, accompanied by conservative changes to GO
terms applied by UniProt
findings: []
- id: GO_REF:0000096
title: Automated transfer of experimentally-verified manual GO annotation
data to mouse-rat orthologs
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation
data to orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning
models
findings: []
- id: GO_REF:0000119
title: Automated transfer of experimentally-verified manual GO annotation
data to mouse-human orthologs
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:10545161
title: Callosal axon guidance defects in p35(-/-) mice.
findings: []
- id: PMID:10753743
title: Regulation of N-cadherin-mediated adhesion by the p35-Cdk5 kinase.
findings: []
- id: PMID:11226314
title: Synergistic contributions of cyclin-dependant kinase 5/p35 and
Reelin/Dab1 to the positioning of cortical neurons in the developing mouse
brain.
findings: []
- id: PMID:11276227
title: Cdk5 is involved in neuregulin-induced AChR expression at the
neuromuscular junction.
findings: []
- id: PMID:11517264
title: p35 and p39 are essential for cyclin-dependent kinase 5 function
during neurodevelopment.
findings: []
- id: PMID:12496365
title: CDK5 regulates cell adhesion and migration in corneal epithelial
cells.
findings: []
- id: PMID:12516540
title: The TGF-beta response to Leishmania chagasi in the absence of IL-12.
findings: []
- id: PMID:15096606
title: Cyclin-dependent kinase 5 phosphorylates signal transducer and
activator of transcription 3 and regulates its transcriptional activity.
findings: []
- id: PMID:15123626
title: Cyclin-dependent kinase 5 associated with p39 promotes Munc18-1
phosphorylation and Ca(2+)-dependent exocytosis.
findings: []
- id: PMID:15489224
title: Cdk5/p35 phosphorylates mSds3 and regulates mSds3-mediated repression
of transcription.
findings: []
- id: PMID:17143272
title: Cdk5 regulates EphA4-mediated dendritic spine retraction through an
ephexin1-dependent mechanism.
findings: []
- id: PMID:17341134
title: Cdk5 is involved in BDNF-stimulated dendritic growth in hippocampal
neurons.
findings: []
- id: PMID:17529984
title: Cyclin-dependent kinase 5 governs learning and synaptic plasticity
via control of NMDAR degradation.
findings: []
- id: PMID:17591690
title: Stabilization and activation of p53 induced by Cdk5 contributes to
neuronal cell death.
findings: []
- id: PMID:18054859
title: Cdk5 promotes synaptogenesis by regulating the subcellular
distribution of the MAGUK family member CASK.
findings: []
- id: PMID:18325333
title: CDK5 activator p35 downregulates E-cadherin precursor independently
of CDK5.
findings: []
- id: PMID:19118186
title: Spatial learning impairment, enhanced CDK5/p35 activity, and
downregulation of NMDA receptor expression in transgenic mice expressing
tau-tubulin kinase 1.
findings: []
- id: PMID:20624590
title: Dixdc1 is a critical regulator of DISC1 and embryonic cortical
development.
findings: []
- id: PMID:21566658
title: A novel RING finger protein, Znf179, modulates cell cycle exit and
neuronal differentiation of P19 embryonal carcinoma cells.
findings: []
- id: PMID:24561619
title: Role of the SIK2-p35-PJA2 complex in pancreatic β-cell functional
compensation.
findings: []
- id: PMID:9010203
title: Mice lacking p35, a neuronal specific activator of Cdk5, display
cortical lamination defects, seizures, and adult lethality.
findings: []
- id: Reactome:R-MMU-8863416
title: Calpain 1 or Calpain 2 cleaves Cdk5r1 (p35)
findings: []
- id: Reactome:R-MMU-8868331
title: Cdk5:p25 phosphorylates Golga2
findings: []
- id: Reactome:R-MMU-8868356
title: Cdk5:p25 phosphorylates lamin A
findings: []
- id: Reactome:R-MMU-8868383
title: Cdk5:p25 phosphorylates lamin B1
findings: []
- id: Reactome:R-MMU-8868583
title: Cdk5:p25 phosphorylates Prdx1
findings: []
- id: Reactome:R-MMU-8868589
title: Cdk5:p25 phosphorylates Prdx2
findings: []
- id: Reactome:R-MMU-8868677
title: Cdk5:p25 phosphorylates Jun
findings: []
- id: Reactome:R-MMU-9634937
title: Cdk5r1 gene expression is stimulated by Npas4
findings: []
- id: Reactome:R-NUL-8870566
title: Cdk5:p25 phosphorylates FOXO3
findings: []