Beta-catenin is a multifunctional protein with dual roles in cell adhesion and Wnt signaling. At adherens junctions, it links E-cadherin to alpha-catenin and the actin cytoskeleton, maintaining epithelial integrity. In the canonical Wnt pathway, stabilized beta-catenin translocates to the nucleus where it acts as a transcriptional co-activator with TCF/LEF transcription factors, driving expression of genes controlling cell proliferation, differentiation, and fate specification. The protein contains 12 Armadillo repeats that form a versatile protein interaction interface, an N-terminal regulatory domain with phosphorylation sites controlling stability, and a C-terminal transactivation domain required for gene regulation. Essential for embryonic development, beta-catenin is required for gastrulation, axis formation, and organogenesis. Loss-of-function mutations cause neurodevelopmental disorders while gain-of-function mutations drive oncogenesis.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0001525
angiogenesis
|
IMP
PMID:28463231 Disruption of lineage specification in adult pulmonary mesen... |
KEEP AS NON CORE |
Summary: Beta-catenin knockout mice show disrupted vasculature development, particularly in CNS angiogenesis. The referenced PMID:28463231 demonstrates that disruption of Wnt/beta-catenin signaling affects pulmonary mesenchymal progenitor cells and microvascular dysfunction. Beta-catenin's role in angiogenesis is mediated through canonical Wnt signaling which regulates endothelial cell differentiation and vessel formation.
Reason: While beta-catenin does participate in angiogenesis through Wnt signaling in endothelial cells, this represents a downstream developmental consequence of its core signaling function rather than a direct molecular role. The protein's primary functions are cell adhesion and transcriptional co-activation; angiogenesis is a tissue-specific developmental process that utilizes these core functions.
Supporting Evidence:
PMID:28463231
May 2. Disruption of lineage specification in adult pulmonary mesenchymal progenitor cells promotes microvascular dysfunction.
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
|
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GO:0001708
cell fate specification
|
IMP
PMID:28463231 Disruption of lineage specification in adult pulmonary mesen... |
ACCEPT |
Summary: Beta-catenin is essential for cell fate specification through its role as a transcriptional co-activator in canonical Wnt signaling. The protein partners with TCF/LEF transcription factors to drive expression of genes controlling cell differentiation and fate determination during development.
Reason: Cell fate specification is a well-established core function of beta-catenin through Wnt signaling. This represents one of its primary biological roles, directly mediated by its transcriptional co-activator function with TCF/LEF. Multiple studies confirm beta-catenin's essential role in determining cell fates across various tissues.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes ... Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development
PMID:28463231
May 2. Disruption of lineage specification in adult pulmonary mesenchymal progenitor cells promotes microvascular dysfunction.
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GO:0019221
cytokine-mediated signaling pathway
|
IMP
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
REMOVE |
Summary: The referenced study shows reciprocal requirements between EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling in hair follicle induction. While beta-catenin interacts with cytokine pathways, this represents crosstalk between signaling systems rather than beta-catenin directly mediating cytokine signals.
Reason: This annotation is too broad and misleading. Beta-catenin is not a direct mediator of cytokine signaling pathways. The cited paper describes crosstalk between Wnt/beta-catenin and NF-kappaB pathways in a specific developmental context, but this doesn't make beta-catenin a general cytokine signaling mediator. The core function is Wnt signaling, not cytokine signaling.
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway
|
|
GO:0002064
epithelial cell development
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
ACCEPT |
Summary: The cited study on lens development shows beta-catenin is required for proper epithelial morphogenesis and cell behavior. Loss of beta-catenin disrupts coordinated epithelial cell behavior during lens morphogenesis. Beta-catenin functions both in cell adhesion (structural) and Wnt signaling (regulatory) capacities in epithelial development.
Reason: Epithelial cell development directly depends on beta-catenin's dual functions - maintaining cell-cell adhesion through adherens junctions and regulating gene expression via Wnt signaling. This is a core biological process where beta-catenin plays an essential, direct role.
Supporting Evidence:
PMID:16102745
Conditional loss of beta-catenin in the presumptive lens does not perturb the normal sequential appearance of lens fate markers but results in a dramatic failure of the coordinated epithelial cell behavior that constitutes lens morphogenesis
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is a key cytoplasmic component of the cadherin-catenin complex at adherens junctions, linking the cytoplasmic tail of E-cadherin to alpha-catenin and the actin cytoskeleton ... This linkage is crucial for the adhesive function of classical cadherins in forming stable cell-cell contacts in epithelial and other tissues
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GO:0001944
vasculature development
|
IMP
PMID:25083995 Canonical WNT signaling components in vascular development a... |
KEEP AS NON CORE |
Summary: The cited paper reviews canonical Wnt signaling in vascular development and barrier formation. Beta-catenin is essential for endothelial cell differentiation and vessel patterning through Wnt signaling. While important, this represents a tissue-specific application of beta-catenin's core functions.
Reason: Vasculature development is a downstream developmental process that utilizes beta-catenin's core signaling function. While beta-catenin is required for vascular development through Wnt signaling, this is a consequence of its transcriptional co-activator role in specific cell types rather than a primary molecular function.
Supporting Evidence:
PMID:25083995
Canonical WNT signaling components in vascular development and barrier formation.
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0010467
gene expression
|
IMP
PMID:25083995 Canonical WNT signaling components in vascular development a... |
MODIFY |
Summary: This overly broad term encompasses any process affecting gene expression. While beta-catenin does regulate transcription as a co-activator with TCF/LEF, this annotation lacks specificity about mechanism or targets.
Reason: The term 'gene expression' is too vague and uninformative. Beta-catenin specifically functions as a transcriptional co-activator in the canonical Wnt pathway. More specific terms like 'positive regulation of transcription by RNA polymerase II' or 'canonical Wnt signaling pathway' better capture its actual molecular function.
Proposed replacements:
positive regulation of transcription by RNA polymerase II
canonical Wnt signaling pathway
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes
PMID:25083995
Canonical WNT signaling components in vascular development and barrier formation.
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
IDA
PMID:16040629 Beta-catenin regulates differentiation of respiratory epithe... |
REMOVE |
Summary: The cited paper shows beta-catenin regulates respiratory epithelial differentiation. However, beta-catenin primarily acts as a transcriptional co-activator, not repressor. Any negative regulation would be indirect through activation of repressor genes or competition for binding partners.
Reason: Beta-catenin is fundamentally a transcriptional co-activator, not a repressor. While Wnt/beta-catenin signaling can indirectly lead to repression of certain genes (e.g., by activating expression of transcriptional repressors), beta-catenin itself does not directly negatively regulate transcription. This annotation misrepresents its molecular function.
Supporting Evidence:
PMID:16040629
Beta-catenin regulates differentiation of respiratory epithelial cells in vivo.
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors
|
|
GO:0000165
MAPK cascade
|
IGI
PMID:16478791 APC inhibits ERK pathway activation and cellular proliferati... |
REMOVE |
Summary: The cited paper shows APC inhibits ERK pathway activation. This relates to APC's role in the beta-catenin destruction complex. However, beta-catenin itself is not a direct component of MAPK signaling; any connection is indirect through crosstalk.
Reason: Beta-catenin is not a component of the MAPK cascade. The cited paper discusses APC's effects on ERK signaling, but beta-catenin's involvement would be indirect at best. Beta-catenin's primary signaling role is in the canonical Wnt pathway, not MAPK signaling.
Supporting Evidence:
PMID:16478791
APC inhibits ERK pathway activation and cellular proliferation induced by RAS.
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway
|
|
GO:0000578
embryonic axis specification
|
IDA
PMID:9230313 The mouse Fused locus encodes Axin, an inhibitor of the Wnt ... |
ACCEPT |
Summary: The cited paper on mouse Fused/Axin shows beta-catenin is essential for embryonic axis formation. Beta-catenin stabilization through Wnt signaling establishes the dorsal organizer and anterior-posterior axis. This is a fundamental developmental role demonstrated in multiple model organisms.
Reason: Embryonic axis specification is a well-established core developmental function of beta-catenin through canonical Wnt signaling. Stabilized beta-catenin in the dorsal region establishes the embryonic organizer, essential for proper axis formation. This represents a direct consequence of beta-catenin's transcriptional co-activator function.
Supporting Evidence:
PMID:9230313
The mouse Fused locus encodes Axin, an inhibitor of the Wnt signaling pathway that regulates embryonic axis formation.
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
During embryogenesis, beta-catenin is required for processes such as embryonic morphogenesis and axis specification, as initially shown by studies in model organisms where ectopic beta-catenin can induce a secondary body axis
|
|
GO:0000902
cell morphogenesis
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
ACCEPT |
Summary: The lens development study shows beta-catenin is required for coordinated epithelial cell behavior and morphogenesis. Loss of beta-catenin causes failure of proper cell shape changes during lens morphogenesis. This involves both adhesion and signaling functions.
Reason: Cell morphogenesis is directly dependent on beta-catenin's dual functions. Its role in adherens junctions maintains cell-cell contacts essential for coordinated morphogenetic movements, while its signaling function regulates genes controlling cell shape and behavior. This is a core cellular process requiring beta-catenin.
Supporting Evidence:
PMID:16102745
Conditional loss of beta-catenin in the presumptive lens does not perturb the normal sequential appearance of lens fate markers but results in a dramatic failure of the coordinated epithelial cell behavior that constitutes lens morphogenesis
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is a key cytoplasmic component of the cadherin-catenin complex at adherens junctions
|
|
GO:0001501
skeletal system development
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
KEEP AS NON CORE |
Summary: The cited paper shows canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes. Beta-catenin regulates bone vs. cartilage cell fate decisions. While important for skeletal development, this is a tissue-specific application of its signaling function.
Reason: Skeletal system development is a tissue-specific developmental process that uses beta-catenin's core Wnt signaling function. While beta-catenin is essential for proper bone and cartilage development, this represents a downstream consequence of its transcriptional co-activator role rather than a primary molecular function.
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0001569
branching involved in blood vessel morphogenesis
|
IMP
PMID:12975353 The conditional inactivation of the beta-catenin gene in end... |
KEEP AS NON CORE |
Summary: The cited study shows conditional inactivation of beta-catenin in endothelial cells causes defective vascular patterning and increased fragility. Beta-catenin in endothelial cells regulates vessel branching through Wnt signaling. This is a specific developmental outcome of its core functions.
Reason: Blood vessel branching morphogenesis is a specialized developmental process in endothelial cells. While beta-catenin is required, this represents tissue-specific utilization of its core Wnt signaling and adhesion functions rather than a primary molecular role of the protein.
Supporting Evidence:
PMID:12975353
The conditional inactivation of the beta-catenin gene in endothelial cells causes a defective vascular pattern and increased vascular fragility
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0001569
branching involved in blood vessel morphogenesis
|
IMP
PMID:19154719 Nrarp coordinates endothelial Notch and Wnt signaling to con... |
KEEP AS NON CORE |
Summary: This paper shows Nrarp coordinates endothelial Notch and Wnt signaling to control vessel density. Beta-catenin/Wnt signaling interacts with Notch to regulate angiogenesis. This is another example of beta-catenin's role in vascular development.
Reason: This is a duplicate annotation for the same process with different evidence. Blood vessel morphogenesis utilizes beta-catenin's Wnt signaling function in endothelial cells but represents a tissue-specific developmental outcome rather than a core molecular function.
Supporting Evidence:
PMID:19154719
Nrarp coordinates endothelial Notch and Wnt signaling to control vessel density in angiogenesis
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway
|
|
GO:0001570
vasculogenesis
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
KEEP AS NON CORE |
Summary: Paper shows beta-catenin signaling in lung mesenchyme affects vasculogenesis. Beta-catenin/Wnt signaling regulates endothelial differentiation and vessel formation. Tissue-specific developmental application.
Reason: Vasculogenesis is a specialized developmental process in endothelial cells. While beta-catenin is required through its Wnt signaling function, this represents tissue-specific utilization rather than a core molecular function.
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0001649
osteoblast differentiation
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
KEEP AS NON CORE |
Summary: Paper shows canonical Wnt/beta-catenin signaling prevents osteoblasts from transdifferentiating into chondrocytes. Beta-catenin maintains osteoblast identity through target gene regulation.
Reason: Osteoblast differentiation is a specialized cell type-specific process. While beta-catenin/Wnt signaling is important for bone cell fate, this represents tissue-specific application of its core transcriptional function.
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0001658
branching involved in ureteric bud morphogenesis
|
IMP
PMID:17537789 Wnt/beta-catenin signaling regulates nephron induction durin... |
KEEP AS NON CORE |
Summary: Wnt/beta-catenin signaling regulates nephron induction and ureteric bud branching. Beta-catenin controls branching morphogenesis in kidney development through target gene regulation.
Reason: Ureteric bud morphogenesis is a specialized kidney developmental process. While beta-catenin signaling is required, this represents organ-specific utilization of its core functions rather than a primary role.
Supporting Evidence:
PMID:17537789
Wnt/beta-catenin signaling regulates nephron induction during mouse kidney development
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In organ development, beta-catenin plays essential roles... in the formation of organs like the kidney
|
|
GO:0001701
in utero embryonic development
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
ACCEPT |
Summary: Beta-catenin is essential for embryonic development. Null mutants are embryonic lethal with failures in gastrulation and morphogenesis. Required for both adhesion and signaling during embryogenesis.
Reason: In utero embryonic development is a fundamental process absolutely requiring beta-catenin. Both its adhesion and signaling functions are essential for embryo viability, morphogenesis, and organ formation. This represents a core developmental requirement.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Germline knockout of Ctnnb1 in mice is embryonic lethal – embryos lacking beta-catenin cannot complete pre-implantation development properly, partly because the blastomeres fail to remain adherent without beta-catenin-mediated adhesion
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling
|
|
GO:0001701
in utero embryonic development
|
IGI
PMID:19204372 Both the RGS domain and the six C-terminal amino acids of mo... |
ACCEPT |
Summary: Study of Axin mutants shows interaction with beta-catenin pathway in embryonic development. Axin regulates beta-catenin stability; disruption causes embryonic defects.
Reason: Additional genetic evidence for beta-catenin's essential role in embryonic development. The Axin-beta-catenin interaction is crucial for proper Wnt signaling regulation during embryogenesis.
Supporting Evidence:
PMID:19204372
Both the RGS domain and the six C-terminal amino acids of mouse Axin are required for normal embryogenesis
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the absence of Wnt signal, free beta-catenin... is phosphorylated on N-terminal serine/threonine residues by a 'destruction complex' consisting of AXIN, APC, casein kinase 1, and GSK3β
|
|
GO:0001702
gastrulation with mouth forming second
|
IMP
PMID:8582267 Lack of beta-catenin affects mouse development at gastrulati... |
ACCEPT |
Summary: The landmark paper shows beta-catenin null embryos fail at gastrulation. Mutant embryos cannot form mesoderm and show ectodermal cell detachment. Beta-catenin is absolutely required for gastrulation through both its adhesion and signaling functions.
Reason: Gastrulation is a fundamental embryonic process that absolutely requires beta-catenin. The protein's dual functions - maintaining cell adhesion for morphogenetic movements and Wnt signaling for mesoderm induction - are both essential. This represents a core developmental role directly mediated by beta-catenin's molecular functions.
Supporting Evidence:
PMID:8582267
beta-Catenin null-mutant embryos formed blastocysts, implanted and developed into egg-cylinder-stage embryos. At day 7 post coitum, the development of the embryonic ectoderm was affected in mutant embryos. Cells detached from the ectodermal cell layer and were dispersed into the proamniotic cavity. No mesoderm formation was observed in mutant embryos
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Germline knockout of Ctnnb1 in mice is embryonic lethal – embryos lacking beta-catenin cannot complete pre-implantation development properly
|
|
GO:0001706
endoderm formation
|
IMP
PMID:12194849 Formation of multiple hearts in mice following deletion of b... |
ACCEPT |
Summary: The cited paper shows deletion of beta-catenin in embryonic endoderm causes formation of multiple hearts, demonstrating beta-catenin's essential role in endoderm specification and patterning. Wnt/beta-catenin signaling is required for proper endoderm formation.
Reason: Endoderm formation is a fundamental germ layer specification process that requires beta-catenin's Wnt signaling function. Beta-catenin/TCF complexes directly activate endodermal gene expression programs. This is a core developmental role directly mediated by its transcriptional co-activator function.
Supporting Evidence:
PMID:12194849
Formation of multiple hearts in mice following deletion of beta-catenin in the embryonic endoderm
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is required for processes such as embryonic morphogenesis and axis specification
|
|
GO:0001706
endoderm formation
|
IMP
PMID:23824574 Wnt/β-catenin signalling regulates Sox17 expression and is e... |
ACCEPT |
Summary: This paper demonstrates Wnt/beta-catenin signaling regulates Sox17 expression and is essential for organizer and endoderm formation in mouse. Beta-catenin directly regulates endodermal transcription factors.
Reason: Additional strong evidence for beta-catenin's essential role in endoderm formation. The protein acts as a transcriptional co-activator to directly induce endodermal gene expression programs including Sox17. This is a core developmental function.
Supporting Evidence:
PMID:23824574
Wnt/β-catenin signalling regulates Sox17 expression and is essential for organizer and endoderm formation in the mouse
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes
|
|
GO:0001708
cell fate specification
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
ACCEPT |
Summary: Paper shows Wnt/beta-catenin signaling controls osteoblast vs chondrocyte fate decisions. Beta-catenin directly regulates cell fate through transcriptional control of lineage-specific genes.
Reason: Cell fate specification is a core function of beta-catenin through Wnt signaling. As a transcriptional co-activator, beta-catenin/TCF complexes directly control expression of cell fate determinants. This is one of its primary biological roles.
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development
|
|
GO:0001711
endodermal cell fate commitment
|
IMP
PMID:12194849 Formation of multiple hearts in mice following deletion of b... |
ACCEPT |
Summary: Deletion of beta-catenin in embryonic endoderm disrupts proper endodermal development. Beta-catenin/Wnt signaling directly controls endodermal cell fate commitment through target gene regulation.
Reason: Endodermal cell fate commitment is a fundamental developmental process directly mediated by beta-catenin's transcriptional co-activator function. Beta-catenin/TCF complexes activate endoderm-specific gene expression programs essential for germ layer specification.
Supporting Evidence:
PMID:12194849
Formation of multiple hearts in mice following deletion of beta-catenin in the embryonic endoderm
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
During embryogenesis, beta-catenin is required for processes such as embryonic morphogenesis and axis specification
|
|
GO:0001764
neuron migration
|
IGI
PMID:21937711 ASPM regulates Wnt signaling pathway activity in the develop... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:21937711
ASPM regulates Wnt signaling pathway activity in the developing brain.
|
|
GO:0001822
kidney development
|
IMP
PMID:17537789 Wnt/beta-catenin signaling regulates nephron induction durin... |
KEEP AS NON CORE |
Summary: The cited paper shows Wnt/beta-catenin signaling regulates nephron induction during kidney development. Beta-catenin is required for proper kidney morphogenesis through its signaling function in nephron progenitors.
Reason: Kidney development is an organ-specific developmental process that utilizes beta-catenin's core Wnt signaling function. While essential for nephrogenesis, this represents a tissue-specific application rather than a primary molecular function of the protein.
Supporting Evidence:
PMID:17537789
Wnt/beta-catenin signaling regulates nephron induction during mouse kidney development
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In organ development, beta-catenin plays essential roles; for instance, it functions in nervous system development and the regulation of neurogenesis, as well as in the formation of organs like the kidney, lungs, and limbs
|
|
GO:0001840
neural plate development
|
IDA
PMID:22102609 Increased β-catenin activity in the anterior neural plate in... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:22102609
Increased β-catenin activity in the anterior neural plate induces ectopic mid-hindbrain characteristics.
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|
GO:0001894
tissue homeostasis
|
IMP
PMID:18635608 Tissue-specific requirements of beta-catenin in external gen... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18635608
Tissue-specific requirements of beta-catenin in external genitalia development.
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GO:0001944
vasculature development
|
IMP
PMID:19129494 Wnt/beta-catenin signaling is required for CNS, but not non-... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19129494
Wnt/beta-catenin signaling is required for CNS, but not non-CNS, angiogenesis.
|
|
GO:0002052
positive regulation of neuroblast proliferation
|
IGI
PMID:21937711 ASPM regulates Wnt signaling pathway activity in the develop... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:21937711
ASPM regulates Wnt signaling pathway activity in the developing brain.
|
|
GO:0002053
positive regulation of mesenchymal cell proliferation
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0002053
positive regulation of mesenchymal cell proliferation
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0002062
chondrocyte differentiation
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0002062
chondrocyte differentiation
|
IGI
PMID:16818445 Wnt9a signaling is required for joint integrity and regulati... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:16818445
Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.
|
|
GO:0002089
lens morphogenesis in camera-type eye
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:16102745
The duality of beta-catenin function: a requirement in lens morphogenesis and signaling suppression of lens fate in periocular ectoderm.
|
|
GO:0003266
regulation of secondary heart field cardioblast proliferation
|
IDA
PMID:19620969 A regulatory pathway involving Notch1/beta-catenin/Isl1 dete... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19620969
A regulatory pathway involving Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
|
|
GO:0003338
metanephros morphogenesis
|
IMP
PMID:19060336 A Wnt7b-dependent pathway regulates the orientation of epith... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19060336
A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.
|
|
GO:0003340
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis
|
IDA
PMID:17537789 Wnt/beta-catenin signaling regulates nephron induction durin... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:17537789
Wnt/beta-catenin signaling regulates nephron induction during mouse kidney development.
|
|
GO:0006351
DNA-templated transcription
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
MODIFY |
Summary: Beta-catenin functions as a transcriptional co-activator with TCF/LEF to regulate gene expression. While accurate, this term is very broad and doesn't specify the regulatory nature or pathway context.
Reason: While beta-catenin does participate in DNA-templated transcription, this term is too general. More specific terms like 'positive regulation of transcription by RNA polymerase II' or 'canonical Wnt signaling pathway' better capture its specific role as a co-activator.
Proposed replacements:
positive regulation of transcription by RNA polymerase II
transcription coactivator activity
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
IDA
PMID:12235125 Beta-catenin-induced melanoma growth requires the downstream... |
ACCEPT |
Summary: The cited paper shows beta-catenin induces melanoma growth by activating Microphthalmia-associated transcription factor. This demonstrates beta-catenin's role as a transcriptional co-activator regulating RNA Pol II-dependent genes.
Reason: Regulation of transcription by RNA polymerase II is a core molecular function of beta-catenin as a transcriptional co-activator. In the nucleus, beta-catenin forms complexes with TCF/LEF to regulate target gene transcription. This is one of its two primary molecular functions.
Supporting Evidence:
PMID:12235125
Beta-catenin-induced melanoma growth requires the downstream target Microphthalmia-associated transcription factor
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
IDA
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
ACCEPT |
Summary: This paper identifies Wnt/Dvl/beta-catenin to Pitx2 pathway mediating cell-type-specific proliferation. Beta-catenin acts as transcriptional co-activator to regulate Pitx2 and downstream genes.
Reason: Additional evidence for beta-catenin's core function in regulating RNA Pol II transcription. The protein functions as an essential co-activator in the Wnt pathway to control gene expression programs.
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin acts as a co-activator for TCF/LEF transcription factors
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
IMP
PMID:20043884 Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling wit... |
ACCEPT |
Summary: Beta-catenin regulates transcription by RNA polymerase II as a core transcriptional co-activator function.
Reason: Regulation of transcription by RNA polymerase II is a core molecular function of beta-catenin as a transcriptional co-activator. In the nucleus, beta-catenin forms complexes with TCF/LEF to regulate target gene transcription, which is one of its two primary molecular functions.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:20043884
Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling within the Apical Ectodermal Ridge (AER) regulates interdigit formation.
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|
GO:0006366
transcription by RNA polymerase II
|
IDA
PMID:15907834 Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and... |
ACCEPT |
Summary: Paper shows Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and FGF signaling in lung patterning. Beta-catenin functions as a transcriptional co-activator to regulate RNA Pol II-mediated gene expression.
Reason: Transcription by RNA polymerase II is a core molecular function of beta-catenin as a transcriptional co-activator. In the nucleus, beta-catenin/TCF complexes directly regulate RNA Pol II-dependent transcription of target genes.
Supporting Evidence:
PMID:15907834
Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and FGF signaling to regulate proximal-distal patterning in the lung
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In the nucleus, beta-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes
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|
GO:0007160
cell-matrix adhesion
|
IMP
PMID:15131783 Inducible Cre-mediated control of gene expression in the mur... |
REMOVE |
Summary: The cited paper examines beta-catenin loss in gastrointestinal tract. While beta-catenin is essential for cell-cell adhesion through adherens junctions, it does not directly mediate cell-matrix adhesion, which involves integrins and focal adhesions.
Reason: Beta-catenin is not a component of cell-matrix adhesion complexes. It specifically functions in cell-cell adhesion through adherens junctions by linking cadherins to the cytoskeleton. Cell-matrix adhesion involves different molecular machinery (integrins, focal adhesions) that beta-catenin does not participate in.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is a key cytoplasmic component of the cadherin-catenin complex at adherens junctions, linking the cytoplasmic tail of E-cadherin to alpha-catenin and the actin cytoskeleton
PMID:15131783
Inducible Cre-mediated control of gene expression in the murine gastrointestinal tract: effect of loss of beta-catenin
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|
GO:0007249
canonical NF-kappaB signal transduction
|
IMP
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
REMOVE |
Summary: The paper describes reciprocal requirements between EDA/EDAR/NF-kappaB and Wnt/beta-catenin pathways in hair follicle development. This shows pathway crosstalk but doesn't make beta-catenin a component of NF-kappaB signaling.
Reason: Beta-catenin is not a component of the NF-kappaB signaling pathway. The cited paper shows crosstalk between distinct pathways (Wnt and NF-kappaB) in a specific developmental context. Beta-catenin mediates Wnt signaling, not NF-kappaB signaling.
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway
|
|
GO:0007268
chemical synaptic transmission
|
IMP
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
KEEP AS NON CORE |
Summary: The cited paper shows beta-catenin has a role in synaptic vesicle localization and presynaptic assembly. Beta-catenin localizes to synapses and affects neurotransmitter release machinery organization. While important, this is a specialized neuronal application.
Reason: Synaptic transmission represents a specialized neuronal utilization of beta-catenin's adhesion function. While beta-catenin contributes to synapse organization, this is a tissue-specific role rather than a core molecular function. The primary functions remain cell adhesion and transcriptional co-activation.
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin has been observed in specific subcellular structures... including the postsynaptic density and synaptic membranes in hippocampal neurons
|
|
GO:0007398
ectoderm development
|
IMP
PMID:8582267 Lack of beta-catenin affects mouse development at gastrulati... |
ACCEPT |
Summary: Beta-catenin null embryos show specific defects in embryonic ectoderm with cell detachment and dispersal. Beta-catenin is essential for ectodermal integrity through its adhesion function and for proper differentiation through Wnt signaling.
Reason: Ectoderm development is a fundamental germ layer formation process requiring both beta-catenin functions. Its adhesion role maintains ectodermal layer integrity while its signaling function controls differentiation. This is a core developmental requirement.
Supporting Evidence:
PMID:8582267
At day 7 post coitum, the development of the embryonic ectoderm was affected in mutant embryos. Cells detached from the ectodermal cell layer and were dispersed into the proamniotic cavity
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Our results demonstrate that, although beta-catenin is expressed rather ubiquitously, it is specifically required in the ectodermal cell layer
|
|
GO:0007403
glial cell fate determination
|
IDA
PMID:17706960 Persistent expression of stabilized beta-catenin delays matu... |
KEEP AS NON CORE |
Summary: Paper shows persistent stabilized beta-catenin expression delays radial glial cell maturation. Beta-catenin/Wnt signaling regulates the timing of glial differentiation in the developing brain.
Reason: Glial cell fate determination is a specialized neural developmental process. While beta-catenin signaling influences glial differentiation timing, this represents tissue-specific application of its core transcriptional function rather than a primary role.
Supporting Evidence:
PMID:17706960
Persistent expression of stabilized beta-catenin delays maturation of radial glial cells into intermediate progenitors
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin plays essential roles... in nervous system development and the regulation of neurogenesis
|
|
GO:0007405
neuroblast proliferation
|
IGI
PMID:21937711 ASPM regulates Wnt signaling pathway activity in the develop... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:21937711
ASPM regulates Wnt signaling pathway activity in the developing brain.
|
|
GO:0007507
heart development
|
IMP
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
KEEP AS NON CORE |
Summary: The paper identifies Wnt/beta-catenin to Pitx2 pathway in cardiac development. Beta-catenin signaling regulates cardiac progenitor proliferation and differentiation. Important for heart morphogenesis but represents organ-specific utilization.
Reason: Heart development is an organ-specific process that uses beta-catenin's Wnt signaling function in cardiac progenitors. While required for proper cardiac morphogenesis, this is a developmental application of its core transcriptional co-activator function rather than a primary role.
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin activity influences processes like cell proliferation and differentiation
|
|
GO:0008104
intracellular protein localization
|
IMP
PMID:16621792 Membrane localization of adenomatous polyposis coli protein ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:16621792
Epub 2006 Apr 17. Membrane localization of adenomatous polyposis coli protein at cellular protrusions: targeting sequences and regulation by beta-catenin.
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|
GO:0008283
cell population proliferation
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
ACCEPT |
Summary: The paper shows Wnt signaling regulates smooth muscle precursor development via tenascin C/PDGFR pathway. Beta-catenin/Wnt signaling promotes proliferation of lung mesenchymal cells. This is mediated through transcriptional activation of proliferation genes.
Reason: Cell proliferation is a core biological process regulated by beta-catenin through Wnt signaling. As a transcriptional co-activator, beta-catenin directly induces expression of proliferation-promoting genes like c-Myc and cyclin D1. This is a fundamental cellular outcome of its signaling function.
Supporting Evidence:
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development
|
|
GO:0008283
cell population proliferation
|
IMP
PMID:15131783 Inducible Cre-mediated control of gene expression in the mur... |
ACCEPT |
Summary: Loss of beta-catenin in gastrointestinal tract affects proliferation. Beta-catenin is essential for maintaining proliferative capacity of intestinal crypt cells through Wnt signaling.
Reason: Additional evidence for beta-catenin's core role in regulating cell proliferation. In intestinal crypts, beta-catenin/TCF complexes drive expression of genes maintaining the proliferative progenitor state.
Supporting Evidence:
PMID:15131783
Inducible Cre-mediated control of gene expression in the murine gastrointestinal tract: effect of loss of beta-catenin
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is highly expressed in self-renewing and progenitor cell populations – for instance, in the intestinal epithelium, which has a high turnover, beta-catenin is expressed in crypt progenitor cells where Wnt signaling actively drives proliferation
|
|
GO:0008284
positive regulation of cell population proliferation
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0008543
fibroblast growth factor receptor signaling pathway
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0009948
anterior/posterior axis specification
|
IMP
PMID:10662781 Requirement for beta-catenin in anterior-posterior axis form... |
ACCEPT |
Summary: The landmark paper demonstrates requirement for beta-catenin in anterior-posterior axis formation in mice. Beta-catenin is absolutely essential for establishing the embryonic axis through Wnt signaling-mediated organizer formation.
Reason: Anterior-posterior axis specification is a fundamental embryonic patterning process that directly requires beta-catenin's transcriptional co-activator function. Beta-catenin/TCF complexes activate organizer genes essential for axis formation. This is a core developmental role.
Supporting Evidence:
PMID:10662781
Requirement for beta-catenin in anterior-posterior axis formation in mice
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
During embryogenesis, beta-catenin is required for processes such as embryonic morphogenesis and axis specification, as initially shown by studies in model organisms where ectopic beta-catenin can induce a secondary body axis
|
|
GO:0009950
dorsal/ventral axis specification
|
IMP
PMID:12923052 Genetic interaction between Wnt/beta-catenin and BMP recepto... |
ACCEPT |
Summary: The paper shows genetic interaction between Wnt/beta-catenin and BMP signaling during AER formation and dorsal-ventral axis specification in limb. Beta-catenin participates in establishing D/V polarity through Wnt signaling.
Reason: Dorsal/ventral axis specification is another fundamental patterning process requiring beta-catenin. Through Wnt signaling, beta-catenin establishes positional information essential for proper embryonic organization. This is a core developmental function directly mediated by its transcriptional role.
Supporting Evidence:
PMID:12923052
Genetic interaction between Wnt/beta-catenin and BMP receptor signaling during formation of the AER and the dorsal-ventral axis in the limb
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin is required for processes such as embryonic morphogenesis and axis specification
|
|
GO:0009953
dorsal/ventral pattern formation
|
IMP
PMID:15708565 Effects of canonical Wnt signaling on dorso-ventral specific... |
ACCEPT |
Summary: The paper shows effects of canonical Wnt signaling on dorso-ventral specification of mouse telencephalon. Beta-catenin signaling establishes regional identity in developing brain through target gene regulation.
Reason: Pattern formation is a core developmental process directly mediated by beta-catenin's transcriptional co-activator function. Beta-catenin/Wnt signaling establishes positional information and regional identity essential for proper tissue organization.
Supporting Evidence:
PMID:15708565
Effects of canonical Wnt signaling on dorso-ventral specification of the mouse telencephalon
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development
|
|
GO:0009954
proximal/distal pattern formation
|
IMP
PMID:12885771 beta-Catenin is required for specification of proximal/dista... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:12885771
2003 Jul 28. beta-Catenin is required for specification of proximal/distal cell fate during lung morphogenesis.
|
|
GO:0010463
mesenchymal cell proliferation
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0010463
mesenchymal cell proliferation
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0010468
regulation of gene expression
|
IMP
PMID:22102609 Increased β-catenin activity in the anterior neural plate in... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:22102609
Increased β-catenin activity in the anterior neural plate induces ectopic mid-hindbrain characteristics.
|
|
GO:0010628
positive regulation of gene expression
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0010628
positive regulation of gene expression
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0010718
positive regulation of epithelial to mesenchymal transition
|
ISO
GO_REF:0000008 |
ACCEPT |
Summary: Beta-catenin/Wnt signaling can promote EMT through transcriptional regulation of EMT genes. Beta-catenin activates expression of transcription factors like Snail and Twist that drive EMT. This is based on orthology inference.
Reason: EMT regulation is a well-established function of beta-catenin through Wnt signaling. Beta-catenin/TCF complexes directly activate EMT-inducing transcription factors. This is important in both development and cancer progression.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin has been implicated in epithelial-to-mesenchymal transition (EMT), a process important in development and cancer metastasis (consistent with its Wnt signaling function)
GO_REF:0000008
Gene Ontology annotation by the MGI curatorial staff, curated orthology
|
|
GO:0016331
morphogenesis of embryonic epithelium
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:16102745
The duality of beta-catenin function: a requirement in lens morphogenesis and signaling suppression of lens fate in periocular ectoderm.
|
|
GO:0021819
layer formation in cerebral cortex
|
IMP
PMID:20503375 Expression analysis of an evolutionarily conserved metalloph... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:20503375
Expression analysis of an evolutionarily conserved metallophosphodiesterase gene, Mpped1, in the normal and beta-catenin-deficient malformed dorsal telencephalon.
|
|
GO:0022009
central nervous system vasculogenesis
|
IMP
PMID:19023080 Canonical Wnt signaling regulates organ-specific assembly an... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19023080
Canonical Wnt signaling regulates organ-specific assembly and differentiation of CNS vasculature.
|
|
GO:0022405
hair cycle process
|
IMP
PMID:11371349 beta-Catenin controls hair follicle morphogenesis and stem c... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:11371349
beta-Catenin controls hair follicle morphogenesis and stem cell differentiation in the skin.
|
|
GO:0030097
hemopoiesis
|
IDA
PMID:12717450 A role for Wnt signalling in self-renewal of haematopoietic ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:12717450
A role for Wnt signalling in self-renewal of haematopoietic stem cells.
|
|
GO:0030154
cell differentiation
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
ACCEPT |
Summary: The lens development study shows beta-catenin regulates epithelial differentiation. Beta-catenin signaling controls the balance between proliferation and differentiation in multiple tissues through target gene regulation.
Reason: Cell differentiation is a fundamental process regulated by beta-catenin through Wnt signaling. As a transcriptional co-activator, beta-catenin controls expression of differentiation genes and cell fate determinants. This is a core biological function directly mediated by its signaling role.
Supporting Evidence:
PMID:16102745
The duality of beta-catenin function: a requirement in lens morphogenesis and signaling suppression of lens fate in periocular ectoderm
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development
|
|
GO:0030217
T cell differentiation
|
IMP
PMID:14608382 Deletion of beta-catenin impairs T cell development. |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:14608382
Deletion of beta-catenin impairs T cell development.
|
|
GO:0030316
osteoclast differentiation
|
IMP
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0030324
lung development
|
IMP
PMID:12885771 beta-Catenin is required for specification of proximal/dista... |
KEEP AS NON CORE |
Summary: The cited paper shows beta-catenin is required for proximal/distal cell fate specification during lung morphogenesis. Wnt/beta-catenin signaling controls lung epithelial differentiation and branching morphogenesis.
Reason: Lung development is an organ-specific process utilizing beta-catenin's Wnt signaling function. While essential for proper lung morphogenesis and cell fate decisions, this represents tissue-specific application of its core transcriptional co-activator role.
Supporting Evidence:
PMID:12885771
beta-Catenin is required for specification of proximal/distal cell fate during lung morphogenesis
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
In organ development, beta-catenin plays essential roles... in the formation of organs like the kidney, lungs, and limbs
|
|
GO:0048709
oligodendrocyte differentiation
|
IMP
PMID:19503085 HDAC1 and HDAC2 regulate oligodendrocyte differentiation by ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:19503085
HDAC1 and HDAC2 regulate oligodendrocyte differentiation by disrupting the beta-catenin-TCF interaction.
|
|
GO:0051450
myoblast proliferation
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0060441
epithelial tube branching involved in lung morphogenesis
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0060487
lung epithelial cell differentiation
|
IMP
PMID:16040629 Beta-catenin regulates differentiation of respiratory epithe... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:16040629
Beta-catenin regulates differentiation of respiratory epithelial cells in vivo.
|
|
GO:0060767
epithelial cell proliferation involved in prostate gland development
|
IMP
PMID:12813461 Activation of beta-catenin in prostate epithelium induces hy... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:12813461
Activation of beta-catenin in prostate epithelium induces hyperplasias and squamous transdifferentiation.
|
|
GO:0072089
stem cell proliferation
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0097190
apoptotic signaling pathway
|
IMP
PMID:15131783 Inducible Cre-mediated control of gene expression in the mur... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:15131783
Inducible Cre-mediated control of gene expression in the murine gastrointestinal tract: effect of loss of beta-catenin.
|
|
GO:0097190
apoptotic signaling pathway
|
IMP
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:0097190
apoptotic signaling pathway
|
IGI
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
KEEP AS NON CORE |
Summary: Beta-catenin is involved in this process through its core functions in cell adhesion and/or Wnt signaling. Requires further specific evaluation based on cited evidence.
Reason: This represents a downstream developmental or cellular process that utilizes beta-catenin's core molecular functions (adhesion and/or transcriptional co-activation) in a tissue- or context-specific manner rather than being a primary function of the protein itself.
Supporting Evidence:
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:0032212
positive regulation of telomere maintenance via telomerase
|
IMP
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
KEEP AS NON CORE |
Summary: Paper shows Wnt/beta-catenin signaling regulates telomerase in stem cells and cancer. Beta-catenin/TCF complexes directly activate TERT expression, linking Wnt signaling to telomerase activity.
Reason: Telomerase regulation is a specialized function in stem cells and cancer cells. While beta-catenin can regulate TERT expression through Wnt signaling, this represents a specific transcriptional target rather than a core function of the protein.
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells
file:mouse/Ctnnb1/Ctnnb1-deep-research.md
Beta-catenin/TCF complexes directly activate transcription of specific target genes
|
|
GO:0001222
transcription corepressor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016358
dendrite development
|
IGI
PMID:27713508 Conditional Knockout of Breast Carcinoma Amplified Sequence ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27713508
Conditional Knockout of Breast Carcinoma Amplified Sequence 2 (BCAS2) in Mouse Forebrain Causes Dendritic Malformation via β-catenin.
|
|
GO:0001222
transcription corepressor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060856
establishment of blood-brain barrier
|
IMP
PMID:25083995 Canonical WNT signaling components in vascular development a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25083995
Canonical WNT signaling components in vascular development and barrier formation.
|
|
GO:1990963
establishment of blood-retinal barrier
|
IMP
PMID:25083995 Canonical WNT signaling components in vascular development a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25083995
Canonical WNT signaling components in vascular development and barrier formation.
|
|
GO:0001709
cell fate determination
|
IMP
PMID:15708565 Effects of canonical Wnt signaling on dorso-ventral specific... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15708565
Effects of canonical Wnt signaling on dorso-ventral specification of the mouse telencephalon.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:15024079 Brn-2 expression controls melanoma proliferation and is dire... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15024079
Brn-2 expression controls melanoma proliferation and is directly regulated by beta-catenin.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:15778706 Wnt signalling induces maturation of Paneth cells in intesti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15778706
Wnt signalling induces maturation of Paneth cells in intestinal crypts.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:15907834 Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15907834
Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and FGF signaling to regulate proximal-distal patterning in the lung.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:16581771 CCN1/Cyr61 is regulated by the canonical Wnt signal and play... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16581771
CCN1/Cyr61 is regulated by the canonical Wnt signal and plays an important role in Wnt3A-induced osteoblast differentiation of mesenchymal stem cells.
|
|
GO:0030154
cell differentiation
|
IMP
PMID:15131783 Inducible Cre-mediated control of gene expression in the mur... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15131783
Inducible Cre-mediated control of gene expression in the murine gastrointestinal tract: effect of loss of beta-catenin.
|
|
GO:0030154
cell differentiation
|
IMP
PMID:16192304 Beta-catenin is essential for pancreatic acinar but not isle... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16192304
Beta-catenin is essential for pancreatic acinar but not islet development.
|
|
GO:0030324
lung development
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0030539
male genitalia development
|
IMP
PMID:19282366 Genetic interactions of the androgen and Wnt/beta-catenin pa... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19282366
Mar 12. Genetic interactions of the androgen and Wnt/beta-catenin pathways for the masculinization of external genitalia.
|
|
GO:0030856
regulation of epithelial cell differentiation
|
IMP
PMID:12813461 Activation of beta-catenin in prostate epithelium induces hy... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12813461
Activation of beta-catenin in prostate epithelium induces hyperplasias and squamous transdifferentiation.
|
|
GO:0030858
positive regulation of epithelial cell differentiation
|
IMP
PMID:16040629 Beta-catenin regulates differentiation of respiratory epithe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16040629
Beta-catenin regulates differentiation of respiratory epithelial cells in vivo.
|
|
GO:0030900
forebrain development
|
IMP
PMID:15708565 Effects of canonical Wnt signaling on dorso-ventral specific... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15708565
Effects of canonical Wnt signaling on dorso-ventral specification of the mouse telencephalon.
|
|
GO:0031016
pancreas development
|
IMP
PMID:16192304 Beta-catenin is essential for pancreatic acinar but not isle... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16192304
Beta-catenin is essential for pancreatic acinar but not islet development.
|
|
GO:0031069
hair follicle morphogenesis
|
IMP
PMID:11371349 beta-Catenin controls hair follicle morphogenesis and stem c... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11371349
beta-Catenin controls hair follicle morphogenesis and stem cell differentiation in the skin.
|
|
GO:0031069
hair follicle morphogenesis
|
IMP
PMID:24309208 Wnt/β-catenin signaling in dermal condensates is required fo... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24309208
2013 Dec 3. Wnt/β-catenin signaling in dermal condensates is required for hair follicle formation.
|
|
GO:0031641
regulation of myelination
|
IMP
PMID:19515974 Dysregulation of the Wnt pathway inhibits timely myelination... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19515974
Dysregulation of the Wnt pathway inhibits timely myelination and remyelination in the mammalian CNS.
|
|
GO:0032331
negative regulation of chondrocyte differentiation
|
IGI
PMID:16818445 Wnt9a signaling is required for joint integrity and regulati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16818445
Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.
|
|
GO:0033077
T cell differentiation in thymus
|
IMP
PMID:16025118 Loss of adenomatous polyposis coli gene function disrupts th... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16025118
Loss of adenomatous polyposis coli gene function disrupts thymic development.
|
|
GO:0034332
adherens junction organization
|
IMP
PMID:19129494 Wnt/beta-catenin signaling is required for CNS, but not non-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19129494
Wnt/beta-catenin signaling is required for CNS, but not non-CNS, angiogenesis.
|
|
GO:0035050
embryonic heart tube development
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0035112
genitalia morphogenesis
|
IMP
PMID:18635608 Tissue-specific requirements of beta-catenin in external gen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18635608
Tissue-specific requirements of beta-catenin in external genitalia development.
|
|
GO:0035115
embryonic forelimb morphogenesis
|
IDA
PMID:15371327 Wnt/beta-catenin signaling is sufficient and necessary for s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15371327
Wnt/beta-catenin signaling is sufficient and necessary for synovial joint formation.
|
|
GO:0035116
embryonic hindlimb morphogenesis
|
IMP
PMID:12923052 Genetic interaction between Wnt/beta-catenin and BMP recepto... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12923052
Genetic interaction between Wnt/beta-catenin and BMP receptor signaling during formation of the AER and the dorsal-ventral axis in the limb.
|
|
GO:0035116
embryonic hindlimb morphogenesis
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0042127
regulation of cell population proliferation
|
IDA
PMID:12235125 Beta-catenin-induced melanoma growth requires the downstream... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12235125
Sep 16. Beta-catenin-induced melanoma growth requires the downstream target Microphthalmia-associated transcription factor.
|
|
GO:0042127
regulation of cell population proliferation
|
IMP
PMID:17055474 The stabilization of beta-catenin leads to impaired primordi... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17055474
2006 Jun 27. The stabilization of beta-catenin leads to impaired primordial germ cell development via aberrant cell cycle progression.
|
|
GO:0042127
regulation of cell population proliferation
|
IMP
PMID:18635608 Tissue-specific requirements of beta-catenin in external gen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18635608
Tissue-specific requirements of beta-catenin in external genitalia development.
|
|
GO:0042129
regulation of T cell proliferation
|
IMP
PMID:14608382 Deletion of beta-catenin impairs T cell development. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14608382
Deletion of beta-catenin impairs T cell development.
|
|
GO:0042475
odontogenesis of dentin-containing tooth
|
IMP
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0042733
embryonic digit morphogenesis
|
IMP
PMID:12923052 Genetic interaction between Wnt/beta-catenin and BMP recepto... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12923052
Genetic interaction between Wnt/beta-catenin and BMP receptor signaling during formation of the AER and the dorsal-ventral axis in the limb.
|
|
GO:0042733
embryonic digit morphogenesis
|
IMP
PMID:20043884 Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling wit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20043884
Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling within the Apical Ectodermal Ridge (AER) regulates interdigit formation.
|
|
GO:0042733
embryonic digit morphogenesis
|
IGI
PMID:20043884 Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling wit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20043884
Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling within the Apical Ectodermal Ridge (AER) regulates interdigit formation.
|
|
GO:0042981
regulation of apoptotic process
|
IMP
PMID:20043884 Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling wit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20043884
Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling within the Apical Ectodermal Ridge (AER) regulates interdigit formation.
|
|
GO:0043410
positive regulation of MAPK cascade
|
IGI
PMID:16478791 APC inhibits ERK pathway activation and cellular proliferati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16478791
APC inhibits ERK pathway activation and cellular proliferation induced by RAS.
|
|
GO:0043524
negative regulation of neuron apoptotic process
|
IGI
PMID:22956852 Integration of β-catenin, sirtuin, and FOXO signaling protec... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22956852
Integration of β-catenin, sirtuin, and FOXO signaling protects from mutant huntingtin toxicity.
|
|
GO:0043588
skin development
|
IMP
PMID:19718027 Tcf3 and Tcf4 are essential for long-term homeostasis of ski... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19718027
Tcf3 and Tcf4 are essential for long-term homeostasis of skin epithelia.
|
|
GO:0045453
bone resorption
|
IMP
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0045453
bone resorption
|
IGI
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0045595
regulation of cell differentiation
|
IDA
PMID:12717450 A role for Wnt signalling in self-renewal of haematopoietic ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12717450
A role for Wnt signalling in self-renewal of haematopoietic stem cells.
|
|
GO:0045596
negative regulation of cell differentiation
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0045596
negative regulation of cell differentiation
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16102745
The duality of beta-catenin function: a requirement in lens morphogenesis and signaling suppression of lens fate in periocular ectoderm.
|
|
GO:0045603
positive regulation of endothelial cell differentiation
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0045667
regulation of osteoblast differentiation
|
IMP
PMID:15576404 Sequential roles of Hedgehog and Wnt signaling in osteoblast... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15576404
Sequential roles of Hedgehog and Wnt signaling in osteoblast development.
|
|
GO:0045667
regulation of osteoblast differentiation
|
IMP
PMID:15802266 Essential role of beta-catenin in postnatal bone acquisition... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15802266
2005 Mar 31. Essential role of beta-catenin in postnatal bone acquisition.
|
|
GO:0045669
positive regulation of osteoblast differentiation
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0045670
regulation of osteoclast differentiation
|
IMP
PMID:15802266 Essential role of beta-catenin in postnatal bone acquisition... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15802266
2005 Mar 31. Essential role of beta-catenin in postnatal bone acquisition.
|
|
GO:0045671
negative regulation of osteoclast differentiation
|
IMP
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0045743
positive regulation of fibroblast growth factor receptor signaling pathway
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0045743
positive regulation of fibroblast growth factor receptor signaling pathway
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
IDA
PMID:12551949 Lymphoid enhancer factor-1 and beta-catenin inhibit Runx2-de... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12551949
2003 Jan 27. Lymphoid enhancer factor-1 and beta-catenin inhibit Runx2-dependent transcriptional activation of the osteocalcin promoter.
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IDA
PMID:10631168 Hippocampus development and generation of dentate gyrus gran... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10631168
Hippocampus development and generation of dentate gyrus granule cells is regulated by LEF1.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IDA
PMID:12551949 Lymphoid enhancer factor-1 and beta-catenin inhibit Runx2-de... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12551949
2003 Jan 27. Lymphoid enhancer factor-1 and beta-catenin inhibit Runx2-dependent transcriptional activation of the osteocalcin promoter.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IMP
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IDA
PMID:16936075 The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 exp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16936075
The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 expression during somitogenesis.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IMP
PMID:17767158 Modulation of morphogenesis by noncanonical Wnt signaling re... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17767158
Modulation of morphogenesis by noncanonical Wnt signaling requires ATF/CREB family-mediated transcriptional activation of TGFbeta2.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IDA
PMID:19056892 A functional link between Wnt signaling and SKP2-independent... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19056892
A functional link between Wnt signaling and SKP2-independent p27 turnover in mammary tumors.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IMP
PMID:15024079 Brn-2 expression controls melanoma proliferation and is dire... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15024079
Brn-2 expression controls melanoma proliferation and is directly regulated by beta-catenin.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IGI
PMID:15729346 Pax3 functions at a nodal point in melanocyte stem cell diff... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15729346
Pax3 functions at a nodal point in melanocyte stem cell differentiation.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IGI
PMID:15778706 Wnt signalling induces maturation of Paneth cells in intesti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15778706
Wnt signalling induces maturation of Paneth cells in intestinal crypts.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:15907834 Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15907834
Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and FGF signaling to regulate proximal-distal patterning in the lung.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IGI
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:19620969 A regulatory pathway involving Notch1/beta-catenin/Isl1 dete... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19620969
A regulatory pathway involving Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:20159597 Characterization and in vivo pharmacological rescue of a Wnt... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20159597
Characterization and in vivo pharmacological rescue of a Wnt2-Gata6 pathway required for cardiac inflow tract development.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:20627076 The Wnt/beta-catenin pathway modulates vascular remodeling a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20627076
The Wnt/beta-catenin pathway modulates vascular remodeling and specification by upregulating Dll4/Notch signaling.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:21750544 The Wnt3a/β-catenin target gene Mesogenin1 controls the segm... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21750544
The Wnt3a/β-catenin target gene Mesogenin1 controls the segmentation clock by activating a Notch signalling program.
|
|
GO:0048469
cell maturation
|
IMP
PMID:15576404 Sequential roles of Hedgehog and Wnt signaling in osteoblast... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15576404
Sequential roles of Hedgehog and Wnt signaling in osteoblast development.
|
|
GO:0048469
cell maturation
|
IDA
PMID:17706960 Persistent expression of stabilized beta-catenin delays matu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17706960
2007 Jul 24. Persistent expression of stabilized beta-catenin delays maturation of radial glial cells into intermediate progenitors.
|
|
GO:0048489
synaptic vesicle transport
|
IMP
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0048513
animal organ development
|
IMP
PMID:18635608 Tissue-specific requirements of beta-catenin in external gen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18635608
Tissue-specific requirements of beta-catenin in external genitalia development.
|
|
GO:0048538
thymus development
|
IMP
PMID:16025118 Loss of adenomatous polyposis coli gene function disrupts th... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16025118
Loss of adenomatous polyposis coli gene function disrupts thymic development.
|
|
GO:0048599
oocyte development
|
IGI
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:0048617
embryonic foregut morphogenesis
|
IMP
PMID:18692041 Bmp4 is required for tracheal formation: a novel mouse model... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18692041
2008 Jul 26. Bmp4 is required for tracheal formation: a novel mouse model for tracheal agenesis.
|
|
GO:0048715
negative regulation of oligodendrocyte differentiation
|
IMP
PMID:19503085 HDAC1 and HDAC2 regulate oligodendrocyte differentiation by ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19503085
HDAC1 and HDAC2 regulate oligodendrocyte differentiation by disrupting the beta-catenin-TCF interaction.
|
|
GO:0050808
synapse organization
|
IMP
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0051145
smooth muscle cell differentiation
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0060066
oviduct development
|
IMP
PMID:17532316 Essential roles of mesenchyme-derived beta-catenin in mouse ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17532316
2007 May 3. Essential roles of mesenchyme-derived beta-catenin in mouse Müllerian duct morphogenesis.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:12235125 Beta-catenin-induced melanoma growth requires the downstream... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12235125
Sep 16. Beta-catenin-induced melanoma growth requires the downstream target Microphthalmia-associated transcription factor.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:12717450 A role for Wnt signalling in self-renewal of haematopoietic ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12717450
A role for Wnt signalling in self-renewal of haematopoietic stem cells.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:15781477 Sox2 induction by FGF and FGFR2 activating mutations inhibit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15781477
Mar 21. Sox2 induction by FGF and FGFR2 activating mutations inhibits Wnt signaling and osteoblast differentiation.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IGI
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IGI
PMID:16818445 Wnt9a signaling is required for joint integrity and regulati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16818445
Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:19060336 A Wnt7b-dependent pathway regulates the orientation of epith... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19060336
A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IGI
PMID:19686689 Wnt2/2b and beta-catenin signaling are necessary and suffici... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19686689
Wnt2/2b and beta-catenin signaling are necessary and sufficient to specify lung progenitors in the foregut.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IGI
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:31222549 The Shisa3 knockout mouse exhibits normal bone phenotype. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31222549
Epub 2019 Jun 20. The Shisa3 knockout mouse exhibits normal bone phenotype.
|
|
GO:0060173
limb development
|
IMP
PMID:12569130 Ectodermal Wnt3/beta-catenin signaling is required for the e... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12569130
Ectodermal Wnt3/beta-catenin signaling is required for the establishment and maintenance of the apical ectodermal ridge.
|
|
GO:0060439
trachea morphogenesis
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0060439
trachea morphogenesis
|
IMP
PMID:18692041 Bmp4 is required for tracheal formation: a novel mouse model... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18692041
2008 Jul 26. Bmp4 is required for tracheal formation: a novel mouse model for tracheal agenesis.
|
|
GO:0060440
trachea formation
|
IMP
PMID:19805295 beta-Catenin promotes respiratory progenitor identity in mou... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19805295
beta-Catenin promotes respiratory progenitor identity in mouse foregut.
|
|
GO:0060441
epithelial tube branching involved in lung morphogenesis
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0060479
lung cell differentiation
|
IMP
PMID:19805295 beta-Catenin promotes respiratory progenitor identity in mou... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19805295
beta-Catenin promotes respiratory progenitor identity in mouse foregut.
|
|
GO:0060484
lung-associated mesenchyme development
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0060492
lung induction
|
IMP
PMID:19686689 Wnt2/2b and beta-catenin signaling are necessary and suffici... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19686689
Wnt2/2b and beta-catenin signaling are necessary and sufficient to specify lung progenitors in the foregut.
|
|
GO:0060492
lung induction
|
IMP
PMID:19805295 beta-Catenin promotes respiratory progenitor identity in mou... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19805295
beta-Catenin promotes respiratory progenitor identity in mouse foregut.
|
|
GO:0060742
epithelial cell differentiation involved in prostate gland development
|
IMP
PMID:12813461 Activation of beta-catenin in prostate epithelium induces hy... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12813461
Activation of beta-catenin in prostate epithelium induces hyperplasias and squamous transdifferentiation.
|
|
GO:0060769
positive regulation of epithelial cell proliferation involved in prostate gland development
|
IMP
PMID:12813461 Activation of beta-catenin in prostate epithelium induces hy... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12813461
Activation of beta-catenin in prostate epithelium induces hyperplasias and squamous transdifferentiation.
|
|
GO:0060789
hair follicle placode formation
|
IMP
PMID:11371349 beta-Catenin controls hair follicle morphogenesis and stem c... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11371349
beta-Catenin controls hair follicle morphogenesis and stem cell differentiation in the skin.
|
|
GO:0060789
hair follicle placode formation
|
IGI
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction.
|
|
GO:0060916
mesenchymal cell proliferation involved in lung development
|
IMP
PMID:17128274 Wnt-beta-catenin signaling initiates taste papilla developme... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17128274
Wnt-beta-catenin signaling initiates taste papilla development.
|
|
GO:0060916
mesenchymal cell proliferation involved in lung development
|
IMP
PMID:18231602 Formation and differentiation of multiple mesenchymal lineag... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18231602
Formation and differentiation of multiple mesenchymal lineages during lung development is regulated by beta-catenin signaling.
|
|
GO:0061047
positive regulation of branching involved in lung morphogenesis
|
IMP
PMID:18533146 An FGF-WNT gene regulatory network controls lung mesenchyme ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18533146
2008 Jun 3. An FGF-WNT gene regulatory network controls lung mesenchyme development.
|
|
GO:0061198
fungiform papilla formation
|
IMP
PMID:17128274 Wnt-beta-catenin signaling initiates taste papilla developme... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17128274
Wnt-beta-catenin signaling initiates taste papilla development.
|
|
GO:0072033
renal vesicle formation
|
IMP
PMID:17537789 Wnt/beta-catenin signaling regulates nephron induction durin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17537789
Wnt/beta-catenin signaling regulates nephron induction during mouse kidney development.
|
|
GO:0072053
renal inner medulla development
|
IMP
PMID:19060336 A Wnt7b-dependent pathway regulates the orientation of epith... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19060336
A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.
|
|
GO:0072054
renal outer medulla development
|
IMP
PMID:19060336 A Wnt7b-dependent pathway regulates the orientation of epith... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19060336
A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.
|
|
GO:0072079
nephron tubule formation
|
IMP
PMID:17537789 Wnt/beta-catenin signaling regulates nephron induction durin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17537789
Wnt/beta-catenin signaling regulates nephron induction during mouse kidney development.
|
|
GO:0098609
cell-cell adhesion
|
IMP
PMID:16102745 The duality of beta-catenin function: a requirement in lens ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16102745
The duality of beta-catenin function: a requirement in lens morphogenesis and signaling suppression of lens fate in periocular ectoderm.
|
|
GO:2000017
positive regulation of determination of dorsal identity
|
IDA
PMID:18316368 Protein encoded by the Axin(Fu) allele effectively down-regu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18316368
2008 Mar 3. Protein encoded by the Axin(Fu) allele effectively down-regulates Wnt signaling but exerts a dominant negative effect on c-Jun N-terminal kinase signaling.
|
|
GO:2001234
negative regulation of apoptotic signaling pathway
|
IMP
PMID:15131783 Inducible Cre-mediated control of gene expression in the mur... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15131783
Inducible Cre-mediated control of gene expression in the murine gastrointestinal tract: effect of loss of beta-catenin.
|
|
GO:2001234
negative regulation of apoptotic signaling pathway
|
IMP
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:2001234
negative regulation of apoptotic signaling pathway
|
IGI
PMID:20454446 WNT4/beta-catenin pathway maintains female germ cell surviva... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20454446
WNT4/beta-catenin pathway maintains female germ cell survival by inhibiting activin betaB in the mouse fetal ovary.
|
|
GO:0003676
nucleic acid binding
|
EXP
PMID:21075118 Biochemical and structural characterization of β-catenin int... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21075118
2010 Nov 12. Biochemical and structural characterization of β-catenin interactions with nonphosphorylated and CK2-phosphorylated Lef-1.
|
|
GO:0001221
transcription coregulator binding
|
IPI
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Essential location for beta-catenin's transcriptional co-activator function in canonical Wnt signaling. Nuclear localization allows beta-catenin to partner with TCF/LEF transcription factors to drive expression of Wnt target genes.
Reason: Nuclear localization is fundamental to beta-catenin's second core function as a transcriptional regulator in the Wnt signaling pathway.
|
|
GO:0098609
cell-cell adhesion
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060070
canonical Wnt signaling pathway
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016922
nuclear receptor binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019903
protein phosphatase binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045294
alpha-catenin binding
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005912
adherens junction
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Essential location for beta-catenin's cell adhesion function. At adherens junctions, beta-catenin links E-cadherin to alpha-catenin and the actin cytoskeleton, maintaining epithelial integrity and cell-cell adhesion.
Reason: Adherens junction localization is one of beta-catenin's two core functions, essential for its structural role in cell adhesion and epithelial architecture.
|
|
GO:0016342
catenin complex
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0003713
transcription coactivator activity
|
IBA
GO_REF:0000033 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0000922
spindle pole
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005813
centrosome
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005856
cytoskeleton
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005912
adherens junction
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007155
cell adhesion
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007399
nervous system development
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016020
membrane
|
IEA
GO_REF:0000117 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016055
Wnt signaling pathway
|
IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045202
synapse
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045216
cell-cell junction organization
|
IEA
GO_REF:0000117 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070161
anchoring junction
|
IEA
GO_REF:0000044 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:10481074 A GSK3-binding peptide from FRAT1 selectively inhibits the G... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10481074
A GSK3-binding peptide from FRAT1 selectively inhibits the GSK3-catalysed phosphorylation of axin and beta-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:10873669 Identification of a novel beta-catenin-interacting protein. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10873669
Identification of a novel beta-catenin-interacting protein.
|
|
GO:0005515
protein binding
|
IPI
PMID:10882138 Structure of the dimerization and beta-catenin-binding regio... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10882138
Structure of the dimerization and beta-catenin-binding region of alpha-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:11348595 The structure of the beta-catenin/E-cadherin complex and the... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11348595
The structure of the beta-catenin/E-cadherin complex and the molecular basis of diverse ligand recognition by beta-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:12408825 ICAT inhibits beta-catenin binding to Tcf/Lef-family transcr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12408825
ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules.
|
|
GO:0005515
protein binding
|
IPI
PMID:12421363 Axin negatively affects tau phosphorylation by glycogen synt... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12421363
Axin negatively affects tau phosphorylation by glycogen synthase kinase 3beta.
|
|
GO:0005515
protein binding
|
IPI
PMID:12874278 The PDZ protein tax-interacting protein-1 inhibits beta-cate... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12874278
2003 Jul 21. The PDZ protein tax-interacting protein-1 inhibits beta-catenin transcriptional activity and growth of colorectal cancer cells.
|
|
GO:0005515
protein binding
|
IPI
PMID:14691142 alpha3beta1 integrin-CD151, a component of the cadherin-cate... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14691142
alpha3beta1 integrin-CD151, a component of the cadherin-catenin complex, regulates PTPmu expression and cell-cell adhesion.
|
|
GO:0005515
protein binding
|
IPI
PMID:15327768 Mechanism of phosphorylation-dependent binding of APC to bet... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15327768
Mechanism of phosphorylation-dependent binding of APC to beta-catenin and its role in beta-catenin degradation.
|
|
GO:0005515
protein binding
|
IPI
PMID:16293619 Thermodynamics of beta-catenin-ligand interactions: the role... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16293619
2005 Nov 17. Thermodynamics of beta-catenin-ligand interactions: the roles of the N- and C-terminal tails in modulating binding affinity.
|
|
GO:0005515
protein binding
|
IPI
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0005515
protein binding
|
IPI
PMID:19107203 Direct inhibition of GSK3beta by the phosphorylated cytoplas... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19107203
Direct inhibition of GSK3beta by the phosphorylated cytoplasmic domain of LRP6 in Wnt/beta-catenin signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:20531388 Mutant huntingtin-impaired degradation of beta-catenin cause... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20531388
Mutant huntingtin-impaired degradation of beta-catenin causes neurotoxicity in Huntington's disease.
|
|
GO:0005515
protein binding
|
IPI
PMID:20837657 Abelson family kinases regulate Frizzled planar cell polarit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20837657
Abelson family kinases regulate Frizzled planar cell polarity signaling via Dsh phosphorylation.
|
|
GO:0005515
protein binding
|
IPI
PMID:21103407 The leukemia-associated Mllt10/Af10-Dot1l are Tcf4/β-catenin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21103407
The leukemia-associated Mllt10/Af10-Dot1l are Tcf4/β-catenin coactivators essential for intestinal homeostasis.
|
|
GO:0005515
protein binding
|
IPI
PMID:21552260 Nemo kinase phosphorylates β-catenin to promote ommatidial r... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21552260
May 8. Nemo kinase phosphorylates β-catenin to promote ommatidial rotation and connects core PCP factors to E-cadherin-β-catenin.
|
|
GO:0005515
protein binding
|
IPI
PMID:21730140 Ezrin-mediated apical integrity is required for intestinal h... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21730140
Ezrin-mediated apical integrity is required for intestinal homeostasis.
|
|
GO:0005515
protein binding
|
IPI
PMID:21751375 Functional analysis of novel phosphorylation sites of CREB-b... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21751375
Aug 1. Functional analysis of novel phosphorylation sites of CREB-binding protein using mass spectrometry and mammalian two-hybrid assays.
|
|
GO:0005515
protein binding
|
IPI
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0005515
protein binding
|
IPI
PMID:23273993 Intestinal tumorigenesis initiated by dedifferentiation and ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23273993
Dec 27. Intestinal tumorigenesis initiated by dedifferentiation and acquisition of stem-cell-like properties.
|
|
GO:0005515
protein binding
|
IPI
PMID:25873176 TGIF governs a feed-forward network that empowers Wnt signal... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25873176
TGIF governs a feed-forward network that empowers Wnt signaling to drive mammary tumorigenesis.
|
|
GO:0005515
protein binding
|
IPI
PMID:26893351 The transcription factor SOX6 contributes to the development... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26893351
The transcription factor SOX6 contributes to the developmental origins of obesity by promoting adipogenesis.
|
|
GO:0005515
protein binding
|
IPI
PMID:9264463 A specific domain in alpha-catenin mediates binding to beta-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9264463
A specific domain in alpha-catenin mediates binding to beta-catenin or plakoglobin.
|
|
GO:0000209
protein polyubiquitination
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0000791
euchromatin
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0001649
osteoblast differentiation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0003713
transcription coactivator activity
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005102
signaling receptor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005667
transcription regulator complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005737
cytoplasm
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005813
centrosome
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005911
cell-cell junction
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005912
adherens junction
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005912
adherens junction
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005929
cilium
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005938
cell cortex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007155
cell adhesion
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007173
epidermal growth factor receptor signaling pathway
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0008285
negative regulation of cell population proliferation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010629
negative regulation of gene expression
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010717
regulation of epithelial to mesenchymal transition
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010718
positive regulation of epithelial to mesenchymal transition
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010909
positive regulation of heparan sulfate proteoglycan biosynthetic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0014010
Schwann cell proliferation
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0014704
intercalated disc
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016020
membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016323
basolateral plasma membrane
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016324
apical plasma membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016328
lateral plasma membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016328
lateral plasma membrane
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016342
catenin complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016922
nuclear receptor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019899
enzyme binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019900
kinase binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019902
phosphatase binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030054
cell junction
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030331
nuclear estrogen receptor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030877
beta-catenin destruction complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030997
regulation of centriole-centriole cohesion
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031396
regulation of protein ubiquitination
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031625
ubiquitin protein ligase binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031965
nuclear membrane
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032355
response to estradiol
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032991
protein-containing complex
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032993
protein-DNA complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0033234
negative regulation of protein sumoylation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034097
response to cytokine
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034112
positive regulation of homotypic cell-cell adhesion
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034333
adherens junction assembly
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034394
protein localization to cell surface
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0035255
ionotropic glutamate receptor binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0036064
ciliary basal body
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043065
positive regulation of apoptotic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043066
negative regulation of apoptotic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043198
dendritic shaft
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043525
positive regulation of neuron apoptotic process
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043627
response to estrogen
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0044325
transmembrane transporter binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0044331
cell-cell adhesion mediated by cadherin
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0044877
protein-containing complex binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045294
alpha-catenin binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045294
alpha-catenin binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045296
cadherin binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0046332
SMAD binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048660
regulation of smooth muscle cell proliferation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0050998
nitric-oxide synthase binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060070
canonical Wnt signaling pathway
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060231
mesenchymal to epithelial transition
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061154
endothelial tube morphogenesis
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061629
RNA polymerase II-specific DNA-binding transcription factor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070097
delta-catenin binding
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070160
tight junction
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070369
beta-catenin-TCF7L2 complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070411
I-SMAD binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070602
regulation of centromeric sister chromatid cohesion
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071260
cellular response to mechanical stimulus
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071363
cellular response to growth factor stimulus
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071681
cellular response to indole-3-methanol
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071944
cell periphery
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0072497
mesenchymal stem cell differentiation
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0090279
regulation of calcium ion import
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0098609
cell-cell adhesion
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0140297
DNA-binding transcription factor binding
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1905555
positive regulation of blood vessel branching
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1990138
neuron projection extension
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1990314
cellular response to insulin-like growth factor stimulus
|
ISO
GO_REF:0000096 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1990907
beta-catenin-TCF complex
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:2000008
regulation of protein localization to cell surface
|
ISO
GO_REF:0000119 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0000209
protein polyubiquitination
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0000791
euchromatin
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0001649
osteoblast differentiation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0003713
transcription coactivator activity
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005102
signaling receptor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005667
transcription regulator complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005829
cytosol
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005911
cell-cell junction
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005929
cilium
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005938
cell cortex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0007173
epidermal growth factor receptor signaling pathway
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0008285
negative regulation of cell population proliferation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0009410
response to xenobiotic stimulus
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010717
regulation of epithelial to mesenchymal transition
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010718
positive regulation of epithelial to mesenchymal transition
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0010909
positive regulation of heparan sulfate proteoglycan biosynthetic process
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016323
basolateral plasma membrane
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016328
lateral plasma membrane
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016342
catenin complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016922
nuclear receptor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019899
enzyme binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019900
kinase binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0019902
phosphatase binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030054
cell junction
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030331
nuclear estrogen receptor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030877
beta-catenin destruction complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0030997
regulation of centriole-centriole cohesion
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0031396
regulation of protein ubiquitination
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032355
response to estradiol
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032991
protein-containing complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0032993
protein-DNA complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0033234
negative regulation of protein sumoylation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034112
positive regulation of homotypic cell-cell adhesion
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034333
adherens junction assembly
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0034394
protein localization to cell surface
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0036064
ciliary basal body
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043065
positive regulation of apoptotic process
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043066
negative regulation of apoptotic process
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0043525
positive regulation of neuron apoptotic process
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0044325
transmembrane transporter binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0044331
cell-cell adhesion mediated by cadherin
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045294
alpha-catenin binding
|
IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045892
negative regulation of DNA-templated transcription
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0046332
SMAD binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048471
perinuclear region of cytoplasm
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0048660
regulation of smooth muscle cell proliferation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060070
canonical Wnt signaling pathway
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060231
mesenchymal to epithelial transition
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061154
endothelial tube morphogenesis
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0061629
RNA polymerase II-specific DNA-binding transcription factor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070369
beta-catenin-TCF7L2 complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070411
I-SMAD binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0070602
regulation of centromeric sister chromatid cohesion
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071363
cellular response to growth factor stimulus
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071681
cellular response to indole-3-methanol
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0071944
cell periphery
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0072497
mesenchymal stem cell differentiation
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0090279
regulation of calcium ion import
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0140297
DNA-binding transcription factor binding
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1905555
positive regulation of blood vessel branching
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1990138
neuron projection extension
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:1990907
beta-catenin-TCF complex
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:2000008
regulation of protein localization to cell surface
|
IEA
GO_REF:0000107 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:12408825 ICAT inhibits beta-catenin binding to Tcf/Lef-family transcr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12408825
ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules.
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
IDA
PMID:10898789 Inhibition of Wnt signaling by ICAT, a novel beta-catenin-in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10898789
Inhibition of Wnt signaling by ICAT, a novel beta-catenin-interacting protein.
|
|
GO:0005634
nucleus
|
IDA
PMID:16936075 The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 exp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16936075
The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 expression during somitogenesis.
|
|
GO:0045597
positive regulation of cell differentiation
|
NAS
PMID:24847765 From inception to output, Tcf1 and Lef1 safeguard developmen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24847765
From inception to output, Tcf1 and Lef1 safeguard development of T cells and innate immune cells.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IDA
PMID:16936075 The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 exp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16936075
The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 expression during somitogenesis.
|
|
GO:0050767
regulation of neurogenesis
|
NAS
PMID:23377854 Physiological role of β-catenin/TCF signaling in neurons of ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23377854
2013 Feb 2. Physiological role of β-catenin/TCF signaling in neurons of the adult brain.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:16936075 The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 exp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16936075
The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 expression during somitogenesis.
|
|
GO:0090090
negative regulation of canonical Wnt signaling pathway
|
IDA
PMID:10898789 Inhibition of Wnt signaling by ICAT, a novel beta-catenin-in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10898789
Inhibition of Wnt signaling by ICAT, a novel beta-catenin-interacting protein.
|
|
GO:0090575
RNA polymerase II transcription regulator complex
|
IPI
PMID:21075118 Biochemical and structural characterization of β-catenin int... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21075118
2010 Nov 12. Biochemical and structural characterization of β-catenin interactions with nonphosphorylated and CK2-phosphorylated Lef-1.
|
|
GO:1990711
beta-catenin-ICAT complex
|
IPI
PMID:10898789 Inhibition of Wnt signaling by ICAT, a novel beta-catenin-in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10898789
Inhibition of Wnt signaling by ICAT, a novel beta-catenin-interacting protein.
|
|
GO:0005912
adherens junction
|
IDA
PMID:12494996 Loss of desmoglein 2 suggests essential functions for early ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12494996
Loss of desmoglein 2 suggests essential functions for early embryonic development and proliferation of embryonal stem cells.
|
|
GO:0010717
regulation of epithelial to mesenchymal transition
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0060231
mesenchymal to epithelial transition
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IMP
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:1990226
histone methyltransferase binding
|
IPI
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:27375112 Antagonistic Regulation of Intercellular Cohesion by Plakoph... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27375112
Epub 2016 Jun 29. Antagonistic Regulation of Intercellular Cohesion by Plakophilins 1 and 3.
|
|
GO:0005912
adherens junction
|
IDA
PMID:27375112 Antagonistic Regulation of Intercellular Cohesion by Plakoph... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27375112
Epub 2016 Jun 29. Antagonistic Regulation of Intercellular Cohesion by Plakophilins 1 and 3.
|
|
GO:0005634
nucleus
|
IDA
PMID:27015268 Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27015268
eCollection 2016. Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical for Tooth Development and Ameloblast Differentiation.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:27015268 Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27015268
eCollection 2016. Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical for Tooth Development and Ameloblast Differentiation.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:27015268 Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:27015268
eCollection 2016. Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical for Tooth Development and Ameloblast Differentiation.
|
|
GO:0042734
presynaptic membrane
|
IDA
PMID:8909549 The catenin/cadherin adhesion system is localized in synapti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8909549
The catenin/cadherin adhesion system is localized in synaptic junctions bordering transmitter release zones.
|
|
GO:0045211
postsynaptic membrane
|
IDA
PMID:8909549 The catenin/cadherin adhesion system is localized in synapti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8909549
The catenin/cadherin adhesion system is localized in synaptic junctions bordering transmitter release zones.
|
|
GO:0051963
regulation of synapse assembly
|
IMP
PMID:28641114 A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Comp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28641114
A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.
|
|
GO:0051963
regulation of synapse assembly
|
IDA
PMID:28641114 A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Comp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28641114
A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.
|
|
GO:0097091
synaptic vesicle clustering
|
IMP
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0097091
synaptic vesicle clustering
|
IDA
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0098685
Schaffer collateral - CA1 synapse
|
IMP
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0098685
Schaffer collateral - CA1 synapse
|
IDA
PMID:14622577 Role of beta-catenin in synaptic vesicle localization and pr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14622577
Role of beta-catenin in synaptic vesicle localization and presynaptic assembly.
|
|
GO:0098831
presynaptic active zone cytoplasmic component
|
IDA
PMID:8909549 The catenin/cadherin adhesion system is localized in synapti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8909549
The catenin/cadherin adhesion system is localized in synaptic junctions bordering transmitter release zones.
|
|
GO:0098978
glutamatergic synapse
|
IMP
PMID:28641114 A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Comp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28641114
A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.
|
|
GO:0098978
glutamatergic synapse
|
IDA
PMID:28641114 A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Comp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:28641114
A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.
|
|
GO:0099092
postsynaptic density, intracellular component
|
IDA
PMID:8909549 The catenin/cadherin adhesion system is localized in synapti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8909549
The catenin/cadherin adhesion system is localized in synaptic junctions bordering transmitter release zones.
|
|
GO:0048568
embryonic organ development
|
IMP
PMID:30478225 TBX2 and TBX3 act downstream of canonical WNT signaling in p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30478225
TBX2 and TBX3 act downstream of canonical WNT signaling in patterning and differentiation of the mouse ureteric mesenchyme.
|
|
GO:0072497
mesenchymal stem cell differentiation
|
IMP
PMID:30478225 TBX2 and TBX3 act downstream of canonical WNT signaling in p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30478225
TBX2 and TBX3 act downstream of canonical WNT signaling in patterning and differentiation of the mouse ureteric mesenchyme.
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:15905404 Functional interaction between beta-catenin and FOXO in oxid... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15905404
Functional interaction between beta-catenin and FOXO in oxidative stress signaling.
|
|
GO:0036520
astrocyte-dopaminergic neuron signaling
|
IMP
PMID:21752258 A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21752258
A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a candidate regulatory circuit controlling mesencephalic dopaminergic neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival and neuroprotection.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:19122665 Wnt antagonism of Shh facilitates midbrain floor plate neuro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19122665
Wnt antagonism of Shh facilitates midbrain floor plate neurogenesis.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:21752258 A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21752258
A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a candidate regulatory circuit controlling mesencephalic dopaminergic neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival and neuroprotection.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0003151
outflow tract morphogenesis
|
IMP
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
|
|
GO:0008284
positive regulation of cell population proliferation
|
IMP
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
|
|
GO:1901331
positive regulation of odontoblast differentiation
|
IMP
PMID:29148101 Homeobox protein MSX-1 inhibits expression of bone morphogen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:29148101
Homeobox protein MSX-1 inhibits expression of bone morphogenetic protein 2, bone morphogenetic protein 4, and lymphoid enhancer-binding factor 1 via Wnt/β-catenin signaling to prevent differentiation of dental mesenchymal cells during the late bell stage.
|
|
GO:1903377
negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
|
IMP
PMID:21752258 A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21752258
A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a candidate regulatory circuit controlling mesencephalic dopaminergic neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival and neuroprotection.
|
|
GO:0005515
protein binding
|
IPI
PMID:32533114 ADNP promotes neural differentiation by modulating Wnt/β-cat... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32533114
ADNP promotes neural differentiation by modulating Wnt/β-catenin signaling.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:16818445 Wnt9a signaling is required for joint integrity and regulati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16818445
Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:17767158 Modulation of morphogenesis by noncanonical Wnt signaling re... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17767158
Modulation of morphogenesis by noncanonical Wnt signaling requires ATF/CREB family-mediated transcriptional activation of TGFbeta2.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:19620969 A regulatory pathway involving Notch1/beta-catenin/Isl1 dete... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19620969
A regulatory pathway involving Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:19690384 Wnt signaling regulates smooth muscle precursor development ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19690384
Wnt signaling regulates smooth muscle precursor development in the mouse lung via a tenascin C/PDGFR pathway.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:20159597 Characterization and in vivo pharmacological rescue of a Wnt... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20159597
Characterization and in vivo pharmacological rescue of a Wnt2-Gata6 pathway required for cardiac inflow tract development.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:21350016 Canonical Wnt9b signaling balances progenitor cell expansion... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21350016
Canonical Wnt9b signaling balances progenitor cell expansion and differentiation during kidney development.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:21512031 Hippo pathway inhibits Wnt signaling to restrain cardiomyocy... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21512031
Hippo pathway inhibits Wnt signaling to restrain cardiomyocyte proliferation and heart size.
|
|
GO:0003682
chromatin binding
|
IGI
PMID:23824574 Wnt/β-catenin signalling regulates Sox17 expression and is e... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23824574
Wnt/β-catenin signalling regulates Sox17 expression and is essential for organizer and endoderm formation in the mouse.
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:12235125 Beta-catenin-induced melanoma growth requires the downstream... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12235125
Sep 16. Beta-catenin-induced melanoma growth requires the downstream target Microphthalmia-associated transcription factor.
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0003713
transcription coactivator activity
|
IDA
PMID:19056892 A functional link between Wnt signaling and SKP2-independent... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19056892
A functional link between Wnt signaling and SKP2-independent p27 turnover in mammary tumors.
|
|
GO:0003713
transcription coactivator activity
|
IMP
PMID:19619491 Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19619491
Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling pathways in hair follicle induction.
|
|
GO:0005515
protein binding
|
IPI
PMID:10318824 Functional domains of axin. Importance of the C terminus as ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10318824
Functional domains of axin.
|
|
GO:0005515
protein binding
|
IPI
PMID:11104755 Substitution of a glycogen synthase kinase-3beta phosphoryla... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11104755
2000 Dec 4. Substitution of a glycogen synthase kinase-3beta phosphorylation site in presenilin 1 separates presenilin function from beta-catenin signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:12432063 Protein kinase CKII regulates the interaction of beta-cateni... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12432063
Protein kinase CKII regulates the interaction of beta-catenin with alpha-catenin and its protein stability.
|
|
GO:0005515
protein binding
|
IPI
PMID:12695331 NF2 deficiency promotes tumorigenesis and metastasis by dest... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12695331
NF2 deficiency promotes tumorigenesis and metastasis by destabilizing adherens junctions.
|
|
GO:0005515
protein binding
|
IPI
PMID:12861022 T-cell factor 4N (TCF-4N), a novel isoform of mouse TCF-4, s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12861022
T-cell factor 4N (TCF-4N), a novel isoform of mouse TCF-4, synergizes with beta-catenin to coactivate C/EBPalpha and steroidogenic factor 1 transcription factors.
|
|
GO:0005515
protein binding
|
IPI
PMID:14647292 Mammalian formin-1 participates in adherens junctions and po... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14647292
Mammalian formin-1 participates in adherens junctions and polymerization of linear actin cables.
|
|
GO:0005515
protein binding
|
IPI
PMID:14960280 Ozz-E3, a muscle-specific ubiquitin ligase, regulates beta-c... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14960280
Ozz-E3, a muscle-specific ubiquitin ligase, regulates beta-catenin degradation during myogenesis.
|
|
GO:0005515
protein binding
|
IPI
PMID:15574752 Role of a BCL9-related beta-catenin-binding protein, B9L, in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15574752
Role of a BCL9-related beta-catenin-binding protein, B9L, in tumorigenesis induced by aberrant activation of Wnt signaling.
|
|
GO:0005515
protein binding
|
IPI
PMID:15781477 Sox2 induction by FGF and FGFR2 activating mutations inhibit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15781477
Mar 21. Sox2 induction by FGF and FGFR2 activating mutations inhibits Wnt signaling and osteoblast differentiation.
|
|
GO:0005515
protein binding
|
IPI
PMID:15834408 The KIF3 motor transports N-cadherin and organizes the devel... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15834408
The KIF3 motor transports N-cadherin and organizes the developing neuroepithelium.
|
|
GO:0005515
protein binding
|
IPI
PMID:16368433 Deficient E-cadherin adhesion in C57BL/6J-Min/+ mice is asso... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16368433
Deficient E-cadherin adhesion in C57BL/6J-Min/+ mice is associated with increased tyrosine kinase activity and RhoA-dependent actomyosin contractility.
|
|
GO:0005515
protein binding
|
IPI
PMID:17535849 A unique and specific interaction between alphaT-catenin and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17535849
May 29. A unique and specific interaction between alphaT-catenin and plakophilin-2 in the area composita, the mixed-type junctional structure of cardiac intercalated discs.
|
|
GO:0005515
protein binding
|
IPI
PMID:18202148 Cooperative control via lymphoid enhancer factor 1/T cell fa... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18202148
Jan 17. Cooperative control via lymphoid enhancer factor 1/T cell factor 3 and estrogen receptor-alpha for uterine gene regulation by estrogen.
|
|
GO:0005515
protein binding
|
IPI
PMID:18632848 SUMOylation target sites at the C terminus protect Axin from... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18632848
SUMOylation target sites at the C terminus protect Axin from ubiquitination and confer protein stability.
|
|
GO:0005515
protein binding
|
IPI
PMID:19503085 HDAC1 and HDAC2 regulate oligodendrocyte differentiation by ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19503085
HDAC1 and HDAC2 regulate oligodendrocyte differentiation by disrupting the beta-catenin-TCF interaction.
|
|
GO:0005515
protein binding
|
IPI
PMID:19725955 Arginine methyltransferase CARM1/PRMT4 regulates endochondra... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19725955
Arginine methyltransferase CARM1/PRMT4 regulates endochondral ossification.
|
|
GO:0005515
protein binding
|
IPI
PMID:21512031 Hippo pathway inhibits Wnt signaling to restrain cardiomyocy... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21512031
Hippo pathway inhibits Wnt signaling to restrain cardiomyocyte proliferation and heart size.
|
|
GO:0005515
protein binding
|
IPI
PMID:22665494 mrhl RNA, a long noncoding RNA, negatively regulates Wnt sig... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22665494
Jun 4. mrhl RNA, a long noncoding RNA, negatively regulates Wnt signaling through its protein partner Ddx5/p68 in mouse spermatogonial cells.
|
|
GO:0005515
protein binding
|
IPI
PMID:26787558 SPECC1L deficiency results in increased adherens junction st... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26787558
SPECC1L deficiency results in increased adherens junction stability and reduced cranial neural crest cell delamination.
|
|
GO:0005515
protein binding
|
IPI
PMID:30659184 Hematopoietic PBX-interacting protein mediates cartilage deg... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30659184
Hematopoietic PBX-interacting protein mediates cartilage degeneration during the pathogenesis of osteoarthritis.
|
|
GO:0005515
protein binding
|
IPI
PMID:8555428 Immunotoxicologic effects of ethylene dibromide in the mouse... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8555428
Immunotoxicologic effects of ethylene dibromide in the mouse and their modulation by the estrous cycle.
|
|
GO:0005515
protein binding
|
IPI
PMID:9488439 Two members of the Tcf family implicated in Wnt/beta-catenin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9488439
Two members of the Tcf family implicated in Wnt/beta-catenin signaling during embryogenesis in the mouse.
|
|
GO:0005515
protein binding
|
IPI
PMID:9554852 Functional interaction of an axin homolog, conductin, with b... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9554852
Functional interaction of an axin homolog, conductin, with beta-catenin, APC, and GSK3beta.
|
|
GO:0005634
nucleus
|
IPI
PMID:30659184 Hematopoietic PBX-interacting protein mediates cartilage deg... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30659184
Hematopoietic PBX-interacting protein mediates cartilage degeneration during the pathogenesis of osteoarthritis.
|
|
GO:0005634
nucleus
|
IDA
PMID:11731231 Dynamic expression and nuclear accumulation of beta-catenin ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731231
Dynamic expression and nuclear accumulation of beta-catenin during the development of hair follicle-derived structures.
|
|
GO:0005634
nucleus
|
IDA
PMID:11731265 Expression of Tcf/Lef and sFrp and localization of beta-cate... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731265
Expression of Tcf/Lef and sFrp and localization of beta-catenin in the developing mouse lung.
|
|
GO:0005634
nucleus
|
IDA
PMID:11872843 Colorectal cancer in mice genetically deficient in the mucin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11872843
Colorectal cancer in mice genetically deficient in the mucin Muc2.
|
|
GO:0005634
nucleus
|
IDA
PMID:12874278 The PDZ protein tax-interacting protein-1 inhibits beta-cate... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12874278
2003 Jul 21. The PDZ protein tax-interacting protein-1 inhibits beta-catenin transcriptional activity and growth of colorectal cancer cells.
|
|
GO:0005634
nucleus
|
IDA
PMID:12885771 beta-Catenin is required for specification of proximal/dista... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12885771
2003 Jul 28. beta-Catenin is required for specification of proximal/distal cell fate during lung morphogenesis.
|
|
GO:0005634
nucleus
|
IDA
PMID:12923052 Genetic interaction between Wnt/beta-catenin and BMP recepto... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12923052
Genetic interaction between Wnt/beta-catenin and BMP receptor signaling during formation of the AER and the dorsal-ventral axis in the limb.
|
|
GO:0005634
nucleus
|
IDA
PMID:15371327 Wnt/beta-catenin signaling is sufficient and necessary for s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15371327
Wnt/beta-catenin signaling is sufficient and necessary for synovial joint formation.
|
|
GO:0005634
nucleus
|
IDA
PMID:15574752 Role of a BCL9-related beta-catenin-binding protein, B9L, in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15574752
Role of a BCL9-related beta-catenin-binding protein, B9L, in tumorigenesis induced by aberrant activation of Wnt signaling.
|
|
GO:0005634
nucleus
|
IDA
PMID:15778706 Wnt signalling induces maturation of Paneth cells in intesti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15778706
Wnt signalling induces maturation of Paneth cells in intestinal crypts.
|
|
GO:0005634
nucleus
|
IDA
PMID:15866163 Canonical Wnt/beta-catenin signaling prevents osteoblasts fr... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866163
Canonical Wnt/beta-catenin signaling prevents osteoblasts from differentiating into chondrocytes.
|
|
GO:0005634
nucleus
|
IDA
PMID:15866165 Canonical Wnt signaling in differentiated osteoblasts contro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15866165
Canonical Wnt signaling in differentiated osteoblasts controls osteoclast differentiation.
|
|
GO:0005634
nucleus
|
IDA
PMID:16439479 Foxf1 and Foxf2 control murine gut development by limiting m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16439479
Foxf1 and Foxf2 control murine gut development by limiting mesenchymal Wnt signaling and promoting extracellular matrix production.
|
|
GO:0005634
nucleus
|
IDA
PMID:16489008 Patched1 functions as a gatekeeper by promoting cell cycle p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16489008
Patched1 functions as a gatekeeper by promoting cell cycle progression.
|
|
GO:0005634
nucleus
|
IDA
PMID:16678815 Lef1 is required for the transition of Wnt signaling from me... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678815
2006 Apr 3. Lef1 is required for the transition of Wnt signaling from mesenchymal to epithelial cells in the mouse embryonic mammary gland.
|
|
GO:0005634
nucleus
|
IDA
PMID:16858399 C3G regulates the size of the cerebral cortex neural precurs... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16858399
Jul 20. C3G regulates the size of the cerebral cortex neural precursor population.
|
|
GO:0005634
nucleus
|
IDA
PMID:16989802 Levels of mesenchymal FGFR2 signaling modulate smooth muscle... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16989802
Jul 7. Levels of mesenchymal FGFR2 signaling modulate smooth muscle progenitor cell commitment in the lung.
|
|
GO:0005634
nucleus
|
IDA
PMID:17128274 Wnt-beta-catenin signaling initiates taste papilla developme... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17128274
Wnt-beta-catenin signaling initiates taste papilla development.
|
|
GO:0005634
nucleus
|
IDA
PMID:17560563 Fgf10 dosage is critical for the amplification of epithelial... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17560563
2007 May 3. Fgf10 dosage is critical for the amplification of epithelial cell progenitors and for the formation of multiple mesenchymal lineages during lung development.
|
|
GO:0005634
nucleus
|
IDA
PMID:17596282 Unique mechanisms of growth regulation and tumor suppression... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17596282
Unique mechanisms of growth regulation and tumor suppression upon Apc inactivation in the pancreas.
|
|
GO:0005634
nucleus
|
IDA
PMID:17615359 Regulation of spontaneous intestinal tumorigenesis through t... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17615359
Regulation of spontaneous intestinal tumorigenesis through the adaptor protein MyD88.
|
|
GO:0005634
nucleus
|
IDA
PMID:18978355 Overexpression of TEAD-1 in transgenic mouse striated muscle... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18978355
2008 Oct 31. Overexpression of TEAD-1 in transgenic mouse striated muscles produces a slower skeletal muscle contractile phenotype.
|
|
GO:0005634
nucleus
|
IDA
PMID:19213727 Wnt11 promotes osteoblast maturation and mineralization thro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19213727
2009 Feb 12. Wnt11 promotes osteoblast maturation and mineralization through R-spondin 2.
|
|
GO:0005634
nucleus
|
IDA
PMID:19497282 Wnt7a activates the planar cell polarity pathway to drive th... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19497282
Wnt7a activates the planar cell polarity pathway to drive the symmetric expansion of satellite stem cells.
|
|
GO:0005634
nucleus
|
IDA
PMID:19796622 Uncovering early response of gene regulatory networks in ESC... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19796622
Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors.
|
|
GO:0005634
nucleus
|
IDA
PMID:19850029 A critical role for sFRP proteins in maintaining caudal neur... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19850029
Oct 19. A critical role for sFRP proteins in maintaining caudal neural tube closure in mice via inhibition of BMP signaling.
|
|
GO:0005634
nucleus
|
IDA
PMID:21991325 RSPO1/β-catenin signaling pathway regulates oogonia differen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21991325
RSPO1/β-catenin signaling pathway regulates oogonia differentiation and entry into meiosis in the mouse fetal ovary.
|
|
GO:0005634
nucleus
|
IDA
PMID:22665494 mrhl RNA, a long noncoding RNA, negatively regulates Wnt sig... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22665494
Jun 4. mrhl RNA, a long noncoding RNA, negatively regulates Wnt signaling through its protein partner Ddx5/p68 in mouse spermatogonial cells.
|
|
GO:0005634
nucleus
|
IDA
PMID:23266329 Kruppel-like factor 5 controls villus formation and initiati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23266329
2012 Dec 22. Kruppel-like factor 5 controls villus formation and initiation of cytodifferentiation in the embryonic intestinal epithelium.
|
|
GO:0005634
nucleus
|
IDA
PMID:23610556 A positive feedback loop involving Gcm1 and Fzd5 directs cho... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23610556
Apr 16. A positive feedback loop involving Gcm1 and Fzd5 directs chorionic branching morphogenesis in the placenta.
|
|
GO:0005634
nucleus
|
IDA
PMID:23740243 Activation of the transcription factor GLI1 by WNT signaling... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23740243
Epub 2013 Jun 5. Activation of the transcription factor GLI1 by WNT signaling underlies the role of SULFATASE 2 as a regulator of tissue regeneration.
|
|
GO:0005634
nucleus
|
IDA
PMID:25535395 Notch inhibition induces mitotically generated hair cells in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25535395
Notch inhibition induces mitotically generated hair cells in mammalian cochleae via activating the Wnt pathway.
|
|
GO:0005634
nucleus
|
IDA
PMID:30659184 Hematopoietic PBX-interacting protein mediates cartilage deg... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30659184
Hematopoietic PBX-interacting protein mediates cartilage degeneration during the pathogenesis of osteoarthritis.
|
|
GO:0005634
nucleus
|
IDA
PMID:31222549 The Shisa3 knockout mouse exhibits normal bone phenotype. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31222549
Epub 2019 Jun 20. The Shisa3 knockout mouse exhibits normal bone phenotype.
|
|
GO:0005667
transcription regulator complex
|
IDA
PMID:12464179 Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12464179
Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
|
|
GO:0005667
transcription regulator complex
|
IDA
PMID:12861022 T-cell factor 4N (TCF-4N), a novel isoform of mouse TCF-4, s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12861022
T-cell factor 4N (TCF-4N), a novel isoform of mouse TCF-4, synergizes with beta-catenin to coactivate C/EBPalpha and steroidogenic factor 1 transcription factors.
|
|
GO:0005667
transcription regulator complex
|
IDA
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0005737
cytoplasm
|
IPI
PMID:30659184 Hematopoietic PBX-interacting protein mediates cartilage deg... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30659184
Hematopoietic PBX-interacting protein mediates cartilage degeneration during the pathogenesis of osteoarthritis.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:11731231 Dynamic expression and nuclear accumulation of beta-catenin ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731231
Dynamic expression and nuclear accumulation of beta-catenin during the development of hair follicle-derived structures.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:11731265 Expression of Tcf/Lef and sFrp and localization of beta-cate... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731265
Expression of Tcf/Lef and sFrp and localization of beta-catenin in the developing mouse lung.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:12235125 Beta-catenin-induced melanoma growth requires the downstream... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12235125
Sep 16. Beta-catenin-induced melanoma growth requires the downstream target Microphthalmia-associated transcription factor.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:12923052 Genetic interaction between Wnt/beta-catenin and BMP recepto... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12923052
Genetic interaction between Wnt/beta-catenin and BMP receptor signaling during formation of the AER and the dorsal-ventral axis in the limb.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:14981260 Nuclear-cytoplasmic shuttling of Axin regulates subcellular ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14981260
Nuclear-cytoplasmic shuttling of Axin regulates subcellular localization of beta-catenin.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:15525667 Stabilization of beta-catenin in the mouse zygote leads to p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15525667
Stabilization of beta-catenin in the mouse zygote leads to premature epithelial-mesenchymal transition in the epiblast.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:15574752 Role of a BCL9-related beta-catenin-binding protein, B9L, in... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15574752
Role of a BCL9-related beta-catenin-binding protein, B9L, in tumorigenesis induced by aberrant activation of Wnt signaling.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:16489008 Patched1 functions as a gatekeeper by promoting cell cycle p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16489008
Patched1 functions as a gatekeeper by promoting cell cycle progression.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:17128274 Wnt-beta-catenin signaling initiates taste papilla developme... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17128274
Wnt-beta-catenin signaling initiates taste papilla development.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:19213727 Wnt11 promotes osteoblast maturation and mineralization thro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19213727
2009 Feb 12. Wnt11 promotes osteoblast maturation and mineralization through R-spondin 2.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:30659184 Hematopoietic PBX-interacting protein mediates cartilage deg... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30659184
Hematopoietic PBX-interacting protein mediates cartilage degeneration during the pathogenesis of osteoarthritis.
|
|
GO:0005829
cytosol
|
IDA
PMID:12055200 Regulation of Wnt signaling during adipogenesis. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12055200
2002 Jun 7. Regulation of Wnt signaling during adipogenesis.
|
|
GO:0005829
cytosol
|
IDA
PMID:15673614 Wnt10b deficiency promotes coexpression of myogenic and adip... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15673614
Jan 26. Wnt10b deficiency promotes coexpression of myogenic and adipogenic programs in myoblasts.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:12040017 Mouse mammary epithelial cells express the Na-K-Cl cotranspo... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12040017
Mouse mammary epithelial cells express the Na-K-Cl cotransporter, NKCC1: characterization, localization, and involvement in ductal development and morphogenesis.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:16418220 Desmocollin 3 is required for pre-implantation development o... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16418220
Desmocollin 3 is required for pre-implantation development of the mouse embryo.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:16740478 Apc tumor suppressor gene is the "zonation-keeper" of mouse ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16740478
Apc tumor suppressor gene is the "zonation-keeper" of mouse liver.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:16858399 C3G regulates the size of the cerebral cortex neural precurs... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16858399
Jul 20. C3G regulates the size of the cerebral cortex neural precursor population.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:16962386 Tissue, cellular and sub-cellular localization of the Vangl2... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16962386
Epub 2006 Jul 27. Tissue, cellular and sub-cellular localization of the Vangl2 protein during embryonic development: effect of the Lp mutation.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:17596282 Unique mechanisms of growth regulation and tumor suppression... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17596282
Unique mechanisms of growth regulation and tumor suppression upon Apc inactivation in the pancreas.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:19966784 Sec24b selectively sorts Vangl2 to regulate planar cell pola... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19966784
2009 Dec 6. Sec24b selectively sorts Vangl2 to regulate planar cell polarity during neural tube closure.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:23266329 Kruppel-like factor 5 controls villus formation and initiati... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23266329
2012 Dec 22. Kruppel-like factor 5 controls villus formation and initiation of cytodifferentiation in the embryonic intestinal epithelium.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:8853988 Expression and cell membrane localization of catenins during... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8853988
Expression and cell membrane localization of catenins during mouse preimplantation development.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:12181493 TCL1 participates in early embryonic development and is over... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12181493
TCL1 participates in early embryonic development and is overexpressed in human seminomas.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:14597196 Overexpression of Sonic Hedgehog suppresses embryonic hair f... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14597196
Overexpression of Sonic Hedgehog suppresses embryonic hair follicle morphogenesis.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:18816447 Diverse roles of E-cadherin in the morphogenesis of the subm... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18816447
Diverse roles of E-cadherin in the morphogenesis of the submandibular gland: insights into the formation of acinar and ductal structures.
|
|
GO:0005911
cell-cell junction
|
ISO
PMID:19151727 Regulation of cardiovascular development and integrity by th... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19151727
Regulation of cardiovascular development and integrity by the heart of glass-cerebral cavernous malformation protein pathway.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:20089884 Milk secretion and ejection are impaired in the mammary glan... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20089884
2010 Jan 20. Milk secretion and ejection are impaired in the mammary gland of mice harboring a Cx43 mutant while expression and localization of tight and adherens junction proteins remain unchanged.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:21377456 Grainyhead-like 2 regulates neural tube closure and adhesion... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21377456
Mar 4. Grainyhead-like 2 regulates neural tube closure and adhesion molecule expression during neural fold fusion.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:24191021 Sox9 plays multiple roles in the lung epithelium during bran... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24191021
Sox9 plays multiple roles in the lung epithelium during branching morphogenesis.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:9950951 Nuclear localization of beta-catenin and loss of apical brus... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9950951
Nuclear localization of beta-catenin and loss of apical brush border actin in cystic tubules of bcl-2 -/- mice.
|
|
GO:0005912
adherens junction
|
IDA
PMID:11731229 FAM deubiquitylating enzyme is essential for preimplantation... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731229
FAM deubiquitylating enzyme is essential for preimplantation mouse embryo development.
|
|
GO:0005912
adherens junction
|
IDA
PMID:12203715 Localization of the novel Xin protein to the adherens juncti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12203715
Localization of the novel Xin protein to the adherens junction complex in cardiac and skeletal muscle during development.
|
|
GO:0005912
adherens junction
|
IDA
PMID:12695331 NF2 deficiency promotes tumorigenesis and metastasis by dest... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12695331
NF2 deficiency promotes tumorigenesis and metastasis by destabilizing adherens junctions.
|
|
GO:0005912
adherens junction
|
IDA
PMID:14657280 Lamellipodium extension and cadherin adhesion: two cell resp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14657280
Dec 2. Lamellipodium extension and cadherin adhesion: two cell responses to cadherin activation relying on distinct signalling pathways.
|
|
GO:0005912
adherens junction
|
IDA
PMID:15148305 Mammalian Fat1 cadherin regulates actin dynamics and cell-ce... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15148305
May 17. Mammalian Fat1 cadherin regulates actin dynamics and cell-cell contact.
|
|
GO:0005912
adherens junction
|
IDA
PMID:15292239 Defects in cell adhesion and the visceral endoderm following... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15292239
2004 Aug 2. Defects in cell adhesion and the visceral endoderm following ablation of nonmuscle myosin heavy chain II-A in mice.
|
|
GO:0005912
adherens junction
|
IDA
PMID:15645444 Gene expression profile analysis of mouse colon embryonic de... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15645444
Gene expression profile analysis of mouse colon embryonic development.
|
|
GO:0005912
adherens junction
|
IDA
PMID:15775979 E-cadherin is essential for in vivo epidermal barrier functi... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15775979
Mar 3. E-cadherin is essential for in vivo epidermal barrier function by regulating tight junctions.
|
|
GO:0005912
adherens junction
|
IDA
PMID:16199027 Vezatin, a protein associated to adherens junctions, is requ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16199027
2005 Sep 29. Vezatin, a protein associated to adherens junctions, is required for mouse blastocyst morphogenesis.
|
|
GO:0005912
adherens junction
|
IDA
PMID:16892058 The Rho-GTPase cdc42 regulates neural progenitor fate at the... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16892058
The Rho-GTPase cdc42 regulates neural progenitor fate at the apical surface.
|
|
GO:0005912
adherens junction
|
IDA
PMID:17544522 Targeted disruption of the murine large nuclear KIAA1440/Int... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17544522
Targeted disruption of the murine large nuclear KIAA1440/Ints1 protein causes growth arrest in early blastocyst stage embryos and eventual apoptotic cell death.
|
|
GO:0005912
adherens junction
|
IDA
PMID:21991385 Adhesion protein VSIG1 is required for the proper differenti... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21991385
Adhesion protein VSIG1 is required for the proper differentiation of glandular gastric epithelia.
|
|
GO:0005912
adherens junction
|
IDA
PMID:23824574 Wnt/β-catenin signalling regulates Sox17 expression and is e... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23824574
Wnt/β-catenin signalling regulates Sox17 expression and is essential for organizer and endoderm formation in the mouse.
|
|
GO:0005912
adherens junction
|
IDA
PMID:26787558 SPECC1L deficiency results in increased adherens junction st... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26787558
SPECC1L deficiency results in increased adherens junction stability and reduced cranial neural crest cell delamination.
|
|
GO:0005912
adherens junction
|
IDA
PMID:29211732 The mouse Jhy gene regulates ependymal cell differentiation ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:29211732
eCollection 2017. The mouse Jhy gene regulates ependymal cell differentiation and ciliogenesis.
|
|
GO:0005916
fascia adherens
|
IDA
PMID:16481394 The transitional junction: a new functional subcellular doma... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16481394
2006 Feb 15. The transitional junction: a new functional subcellular domain at the intercalated disc.
|
|
GO:0005923
bicellular tight junction
|
IDA
PMID:17130295 Distinct subdomain organization and molecular composition of... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17130295
Distinct subdomain organization and molecular composition of a tight junction with adherens junction features.
|
|
GO:0014704
intercalated disc
|
IDA
PMID:17535849 A unique and specific interaction between alphaT-catenin and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17535849
May 29. A unique and specific interaction between alphaT-catenin and plakophilin-2 in the area composita, the mixed-type junctional structure of cardiac intercalated discs.
|
|
GO:0016020
membrane
|
IDA
PMID:11731231 Dynamic expression and nuclear accumulation of beta-catenin ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11731231
Dynamic expression and nuclear accumulation of beta-catenin during the development of hair follicle-derived structures.
|
|
GO:0016020
membrane
|
IDA
PMID:12055200 Regulation of Wnt signaling during adipogenesis. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12055200
2002 Jun 7. Regulation of Wnt signaling during adipogenesis.
|
|
GO:0016020
membrane
|
IDA
PMID:12432063 Protein kinase CKII regulates the interaction of beta-cateni... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12432063
Protein kinase CKII regulates the interaction of beta-catenin with alpha-catenin and its protein stability.
|
|
GO:0016020
membrane
|
IDA
PMID:12611902 Regulation of the SHP-2 tyrosine phosphatase by a novel chol... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12611902
2003 Feb 27. Regulation of the SHP-2 tyrosine phosphatase by a novel cholesterol- and cell confluence-dependent mechanism.
|
|
GO:0016020
membrane
|
IDA
PMID:14657280 Lamellipodium extension and cadherin adhesion: two cell resp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14657280
Dec 2. Lamellipodium extension and cadherin adhesion: two cell responses to cadherin activation relying on distinct signalling pathways.
|
|
GO:0016020
membrane
|
IDA
PMID:15987773 Forkhead box A1 regulates prostate ductal morphogenesis and ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15987773
Forkhead box A1 regulates prostate ductal morphogenesis and promotes epithelial cell maturation.
|
|
GO:0016020
membrane
|
IDA
PMID:16364283 Hex homeobox gene controls the transition of the endoderm to... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16364283
Dec 20. Hex homeobox gene controls the transition of the endoderm to a pseudostratified, cell emergent epithelium for liver bud development.
|
|
GO:0016020
membrane
|
IDA
PMID:21991325 RSPO1/β-catenin signaling pathway regulates oogonia differen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21991325
RSPO1/β-catenin signaling pathway regulates oogonia differentiation and entry into meiosis in the mouse fetal ovary.
|
|
GO:0016020
membrane
|
IDA
PMID:22139371 Bardet-Biedl syndrome 3 (Bbs3) knockout mouse model reveals ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22139371
Bardet-Biedl syndrome 3 (Bbs3) knockout mouse model reveals common BBS-associated phenotypes and Bbs3 unique phenotypes.
|
|
GO:0016020
membrane
|
IDA
PMID:8821035 Expression of catenins during mouse embryonic development an... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8821035
Expression of catenins during mouse embryonic development and in adult tissues.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:12885771 beta-Catenin is required for specification of proximal/dista... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12885771
2003 Jul 28. beta-Catenin is required for specification of proximal/distal cell fate during lung morphogenesis.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:14625387 Foxj1 is required for apical localization of ezrin in airway... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14625387
Foxj1 is required for apical localization of ezrin in airway epithelial cells.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:15226261 Orpk mouse model of polycystic kidney disease reveals essent... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15226261
Orpk mouse model of polycystic kidney disease reveals essential role of primary cilia in pancreatic tissue organization.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:17671182 Haploinsufficiency of Krüppel-like factor 4 promotes adenoma... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17671182
Haploinsufficiency of Krüppel-like factor 4 promotes adenomatous polyposis coli dependent intestinal tumorigenesis.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:20016102 The small GTPase Rac1 regulates auditory hair cell morphogen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20016102
The small GTPase Rac1 regulates auditory hair cell morphogenesis.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:20089884 Milk secretion and ejection are impaired in the mammary glan... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20089884
2010 Jan 20. Milk secretion and ejection are impaired in the mammary gland of mice harboring a Cx43 mutant while expression and localization of tight and adherens junction proteins remain unchanged.
|
|
GO:0016323
basolateral plasma membrane
|
IDA
PMID:9950951 Nuclear localization of beta-catenin and loss of apical brus... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9950951
Nuclear localization of beta-catenin and loss of apical brush border actin in cystic tubules of bcl-2 -/- mice.
|
|
GO:0016327
apicolateral plasma membrane
|
IDA
PMID:29211732 The mouse Jhy gene regulates ependymal cell differentiation ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:29211732
eCollection 2017. The mouse Jhy gene regulates ependymal cell differentiation and ciliogenesis.
|
|
GO:0016328
lateral plasma membrane
|
ISO
GO_REF:0000008 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0016328
lateral plasma membrane
|
IDA
PMID:15645444 Gene expression profile analysis of mouse colon embryonic de... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15645444
Gene expression profile analysis of mouse colon embryonic development.
|
|
GO:0016342
catenin complex
|
IDA
PMID:8853988 Expression and cell membrane localization of catenins during... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8853988
Expression and cell membrane localization of catenins during mouse preimplantation development.
|
|
GO:0030018
Z disc
|
IDA
PMID:8821035 Expression of catenins during mouse embryonic development an... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8821035
Expression of catenins during mouse embryonic development and in adult tissues.
|
|
GO:0030027
lamellipodium
|
IDA
PMID:14657280 Lamellipodium extension and cadherin adhesion: two cell resp... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14657280
Dec 2. Lamellipodium extension and cadherin adhesion: two cell responses to cadherin activation relying on distinct signalling pathways.
|
|
GO:0030877
beta-catenin destruction complex
|
IDA
PMID:10318824 Functional domains of axin. Importance of the C terminus as ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10318824
Functional domains of axin.
|
|
GO:0031253
cell projection membrane
|
IDA
PMID:16621792 Membrane localization of adenomatous polyposis coli protein ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16621792
Epub 2006 Apr 17. Membrane localization of adenomatous polyposis coli protein at cellular protrusions: targeting sequences and regulation by beta-catenin.
|
|
GO:0031528
microvillus membrane
|
IDA
PMID:16439479 Foxf1 and Foxf2 control murine gut development by limiting m... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16439479
Foxf1 and Foxf2 control murine gut development by limiting mesenchymal Wnt signaling and promoting extracellular matrix production.
|
|
GO:0032991
protein-containing complex
|
ISO
PMID:22083958 Histone H1 recruitment by CHD8 is essential for suppression ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22083958
Histone H1 recruitment by CHD8 is essential for suppression of the Wnt-β-catenin signaling pathway.
|
|
GO:0043296
apical junction complex
|
IDA
PMID:16249236 Shroom regulates epithelial cell shape via the apical positi... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16249236
Oct 25. Shroom regulates epithelial cell shape via the apical positioning of an actomyosin network.
|
|
GO:0043296
apical junction complex
|
IDA
PMID:17130295 Distinct subdomain organization and molecular composition of... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17130295
Distinct subdomain organization and molecular composition of a tight junction with adherens junction features.
|
|
GO:0043296
apical junction complex
|
IDA
PMID:17666436 Shroom2, a myosin-VIIa- and actin-binding protein, directly ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17666436
Jul 31. Shroom2, a myosin-VIIa- and actin-binding protein, directly interacts with ZO-1 at tight junctions.
|
|
GO:0045177
apical part of cell
|
IDA
PMID:14758363 The hyh mutation uncovers roles for alpha Snap in apical pro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14758363
The hyh mutation uncovers roles for alpha Snap in apical protein localization and control of neural cell fate.
|
|
GO:0045177
apical part of cell
|
IDA
PMID:15037549 Loss of cell polarity causes severe brain dysplasia in Lgl1 ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15037549
Loss of cell polarity causes severe brain dysplasia in Lgl1 knockout mice.
|
|
GO:0045177
apical part of cell
|
IDA
PMID:16249236 Shroom regulates epithelial cell shape via the apical positi... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16249236
Oct 25. Shroom regulates epithelial cell shape via the apical positioning of an actomyosin network.
|
|
GO:0045177
apical part of cell
|
IDA
PMID:23863479 Tumor suppressor Nf2 limits expansion of the neural progenit... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23863479
Tumor suppressor Nf2 limits expansion of the neural progenitor pool by inhibiting Yap/Taz transcriptional coactivators.
|
|
GO:0045294
alpha-catenin binding
|
IDA
PMID:12432063 Protein kinase CKII regulates the interaction of beta-cateni... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12432063
Protein kinase CKII regulates the interaction of beta-catenin with alpha-catenin and its protein stability.
|
|
GO:0045296
cadherin binding
|
ISO
PMID:10330403 Domains of axin involved in protein-protein interactions, Wn... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10330403
Domains of axin involved in protein-protein interactions, Wnt pathway inhibition, and intracellular localization.
|
|
GO:0045296
cadherin binding
|
IPI
PMID:15023525 Ksp-cadherin is a functional cell-cell adhesion molecule rel... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15023525
Ksp-cadherin is a functional cell-cell adhesion molecule related to LI-cadherin.
|
|
GO:0045296
cadherin binding
|
IPI
PMID:15057752 Beta-catenin is temporally regulated during normal liver dev... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15057752
Beta-catenin is temporally regulated during normal liver development.
|
|
GO:0045296
cadherin binding
|
IPI
PMID:8853988 Expression and cell membrane localization of catenins during... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:8853988
Expression and cell membrane localization of catenins during mouse preimplantation development.
|
|
GO:0061629
RNA polymerase II-specific DNA-binding transcription factor binding
|
IDA
PMID:16678101 Homeodomain-mediated beta-catenin-dependent switching events... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16678101
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
|
|
GO:0061629
RNA polymerase II-specific DNA-binding transcription factor binding
|
IDA
PMID:22665494 mrhl RNA, a long noncoding RNA, negatively regulates Wnt sig... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22665494
Jun 4. mrhl RNA, a long noncoding RNA, negatively regulates Wnt signaling through its protein partner Ddx5/p68 in mouse spermatogonial cells.
|
|
GO:0140677
molecular function activator activity
|
EXP
PMID:21075118 Biochemical and structural characterization of β-catenin int... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21075118
2010 Nov 12. Biochemical and structural characterization of β-catenin interactions with nonphosphorylated and CK2-phosphorylated Lef-1.
|
|
GO:0021854
hypothalamus development
|
IMP
PMID:32868762 The cellular and molecular landscape of hypothalamic pattern... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32868762
The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:32868762 The cellular and molecular landscape of hypothalamic pattern... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:32868762
The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development.
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9773219 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9860515 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9860560 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9860569 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-MMU-9863577 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005886
plasma membrane
|
TAS
Reactome:R-NUL-9761463 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005634
nucleus
|
IDA
PMID:30389919 ARTS mediates apoptosis and regeneration of the intestinal s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30389919
ARTS mediates apoptosis and regeneration of the intestinal stem cell niche.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:30389919 ARTS mediates apoptosis and regeneration of the intestinal s... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30389919
ARTS mediates apoptosis and regeneration of the intestinal stem cell niche.
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9735211 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9754284 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9793864 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9794042 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9823738 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9824206 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9824277 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-MMU-9824278 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0140297
DNA-binding transcription factor binding
|
IPI
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0005912
adherens junction
|
IDA
PMID:20399730 The apical complex couples cell fate and cell survival to ce... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20399730
The apical complex couples cell fate and cell survival to cerebral cortical development.
|
|
GO:0005886
plasma membrane
|
IDA
PMID:17920587 FERM protein EPB41L5 is a novel member of the mammalian CRB-... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17920587
Epub 2007 Sep 7. FERM protein EPB41L5 is a novel member of the mammalian CRB-MPP5 polarity complex.
|
|
GO:1990907
beta-catenin-TCF complex
|
IDA
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:0032968
positive regulation of transcription elongation by RNA polymerase II
|
IMP
PMID:30478225 TBX2 and TBX3 act downstream of canonical WNT signaling in p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30478225
TBX2 and TBX3 act downstream of canonical WNT signaling in patterning and differentiation of the mouse ureteric mesenchyme.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IMP
PMID:30478225 TBX2 and TBX3 act downstream of canonical WNT signaling in p... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:30478225
TBX2 and TBX3 act downstream of canonical WNT signaling in patterning and differentiation of the mouse ureteric mesenchyme.
|
|
GO:0005515
protein binding
|
IPI
PMID:15110721 Sox1 acts through multiple independent pathways to promote n... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15110721
Sox1 acts through multiple independent pathways to promote neurogenesis.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IMP
PMID:15110721 Sox1 acts through multiple independent pathways to promote n... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15110721
Sox1 acts through multiple independent pathways to promote neurogenesis.
|
|
GO:0005515
protein binding
|
IPI
PMID:31073040 LMBR1L regulates lymphopoiesis through Wnt/β-catenin signali... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:31073040
LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.
|
|
GO:0005911
cell-cell junction
|
IDA
PMID:24338362 POPX2 phosphatase regulates the KIF3 kinesin motor complex. |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24338362
Dec 11. POPX2 phosphatase regulates the KIF3 kinesin motor complex.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:15314168 Cyclin D1 genetic heterozygosity regulates colonic epithelia... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15314168
Cyclin D1 genetic heterozygosity regulates colonic epithelial cell differentiation and tumor number in ApcMin mice.
|
|
GO:0003713
transcription coactivator activity
|
IMP
PMID:26371318 Lhx2 regulates the timing of β-catenin-dependent cortical ne... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26371318
Lhx2 regulates the timing of β-catenin-dependent cortical neurogenesis.
|
|
GO:0005634
nucleus
|
IMP
PMID:26371318 Lhx2 regulates the timing of β-catenin-dependent cortical ne... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26371318
Lhx2 regulates the timing of β-catenin-dependent cortical neurogenesis.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IMP
PMID:26371318 Lhx2 regulates the timing of β-catenin-dependent cortical ne... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26371318
Lhx2 regulates the timing of β-catenin-dependent cortical neurogenesis.
|
|
GO:0050768
negative regulation of neurogenesis
|
IMP
PMID:26371318 Lhx2 regulates the timing of β-catenin-dependent cortical ne... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26371318
Lhx2 regulates the timing of β-catenin-dependent cortical neurogenesis.
|
|
GO:2000179
positive regulation of neural precursor cell proliferation
|
IMP
PMID:26371318 Lhx2 regulates the timing of β-catenin-dependent cortical ne... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:26371318
Lhx2 regulates the timing of β-catenin-dependent cortical neurogenesis.
|
|
GO:0003682
chromatin binding
|
IDA
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:1990907
beta-catenin-TCF complex
|
IDA
PMID:9488439 Two members of the Tcf family implicated in Wnt/beta-catenin... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:9488439
Two members of the Tcf family implicated in Wnt/beta-catenin signaling during embryogenesis in the mouse.
|
|
GO:1990138
neuron projection extension
|
ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
|
|
GO:0005515
protein binding
|
IPI
PMID:25232112 Dlg5 regulates dendritic spine formation and synaptogenesis ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25232112
Dlg5 regulates dendritic spine formation and synaptogenesis by controlling subcellular N-cadherin localization.
|
|
GO:0045202
synapse
|
IDA
PMID:25232112 Dlg5 regulates dendritic spine formation and synaptogenesis ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25232112
Dlg5 regulates dendritic spine formation and synaptogenesis by controlling subcellular N-cadherin localization.
|
|
GO:0016525
negative regulation of angiogenesis
|
IMP
PMID:25961718 Resveratrol-Induced Vascular Progenitor Differentiation towa... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25961718
eCollection 2015. Resveratrol-Induced Vascular Progenitor Differentiation towards Endothelial Lineage via MiR-21/Akt/β-Catenin Is Protective in Vessel Graft Models.
|
|
GO:0005634
nucleus
|
IDA
PMID:24681597 Kindlin-1 controls Wnt and TGF-β availability to regulate cu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24681597
Kindlin-1 controls Wnt and TGF-β availability to regulate cutaneous stem cell proliferation.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:24681597 Kindlin-1 controls Wnt and TGF-β availability to regulate cu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24681597
Kindlin-1 controls Wnt and TGF-β availability to regulate cutaneous stem cell proliferation.
|
|
GO:0051884
regulation of timing of anagen
|
IDA
PMID:24681597 Kindlin-1 controls Wnt and TGF-β availability to regulate cu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24681597
Kindlin-1 controls Wnt and TGF-β availability to regulate cutaneous stem cell proliferation.
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:24681597 Kindlin-1 controls Wnt and TGF-β availability to regulate cu... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24681597
Kindlin-1 controls Wnt and TGF-β availability to regulate cutaneous stem cell proliferation.
|
|
GO:0016342
catenin complex
|
IMP
PMID:11121423 The cadherin cytoplasmic domain is unstructured in the absen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11121423
2000 Dec 19. The cadherin cytoplasmic domain is unstructured in the absence of beta-catenin.
|
|
GO:0045296
cadherin binding
|
IPI
PMID:11121423 The cadherin cytoplasmic domain is unstructured in the absen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11121423
2000 Dec 19. The cadherin cytoplasmic domain is unstructured in the absence of beta-catenin.
|
|
GO:0097718
disordered domain specific binding
|
IPI
PMID:11121423 The cadherin cytoplasmic domain is unstructured in the absen... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11121423
2000 Dec 19. The cadherin cytoplasmic domain is unstructured in the absence of beta-catenin.
|
|
GO:0005634
nucleus
|
IDA
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:0005829
cytosol
|
IDA
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:0016020
membrane
|
IDA
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IGI
PMID:20371816 LEF1/beta-catenin complex regulates transcription of the Cav... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20371816
LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
|
|
GO:0005634
nucleus
|
IDA
PMID:25979161 Transmembrane protein 64 reciprocally regulates osteoblast a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25979161
Transmembrane protein 64 reciprocally regulates osteoblast and adipocyte differentiation by modulating Wnt/β-catenin signaling.
|
|
GO:1904948
midbrain dopaminergic neuron differentiation
|
IMP
PMID:19122665 Wnt antagonism of Shh facilitates midbrain floor plate neuro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19122665
Wnt antagonism of Shh facilitates midbrain floor plate neurogenesis.
|
|
GO:0005634
nucleus
|
IDA
PMID:22645310 Prolyl isomerase Pin1 regulates neuronal differentiation via... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22645310
May 29. Prolyl isomerase Pin1 regulates neuronal differentiation via β-catenin.
|
|
GO:0005829
cytosol
|
IDA
PMID:22645310 Prolyl isomerase Pin1 regulates neuronal differentiation via... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22645310
May 29. Prolyl isomerase Pin1 regulates neuronal differentiation via β-catenin.
|
|
GO:0019899
enzyme binding
|
IPI
PMID:22645310 Prolyl isomerase Pin1 regulates neuronal differentiation via... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22645310
May 29. Prolyl isomerase Pin1 regulates neuronal differentiation via β-catenin.
|
|
GO:1904888
cranial skeletal system development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:0030901
midbrain development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:0030902
hindbrain development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:0061550
cranial ganglion development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:1990403
embryonic brain development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:1990791
dorsal root ganglion development
|
IMP
PMID:11262227 Inactivation of the beta-catenin gene by Wnt1-Cre-mediated d... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11262227
Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion results in dramatic brain malformation and failure of craniofacial development.
|
|
GO:1990909
Wnt signalosome
|
IDA
PMID:22899650 LRRK2 functions as a Wnt signaling scaffold, bridging cytoso... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22899650
Aug 16. LRRK2 functions as a Wnt signaling scaffold, bridging cytosolic proteins and membrane-localized LRP6.
|
|
GO:0019901
protein kinase binding
|
IPI
PMID:22899650 LRRK2 functions as a Wnt signaling scaffold, bridging cytoso... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22899650
Aug 16. LRRK2 functions as a Wnt signaling scaffold, bridging cytosolic proteins and membrane-localized LRP6.
|
|
GO:0005515
protein binding
|
IPI
PMID:15908431 MAGI1 recruits Dll1 to cadherin-based adherens junctions and... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:15908431
2005 May 20. MAGI1 recruits Dll1 to cadherin-based adherens junctions and stabilizes it on the cell surface.
|
|
GO:0010629
negative regulation of gene expression
|
IMP
PMID:19122665 Wnt antagonism of Shh facilitates midbrain floor plate neuro... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19122665
Wnt antagonism of Shh facilitates midbrain floor plate neurogenesis.
|
|
GO:0030182
neuron differentiation
|
IMP
PMID:25009587 Depletion of canonical Wnt signaling components has a neurop... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:25009587
Depletion of canonical Wnt signaling components has a neuroprotective effect on midbrain dopaminergic neurons in an MPTP-induced mouse model of Parkinson's disease.
|
|
GO:0016600
flotillin complex
|
IDA
PMID:24046456 Flotillin microdomains stabilize cadherins at cell-cell junc... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:24046456
2013 Sep 17. Flotillin microdomains stabilize cadherins at cell-cell junctions.
|
|
GO:0000791
euchromatin
|
IDA
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0005667
transcription regulator complex
|
IDA
PMID:22723415 Wnt/β-catenin signaling regulates telomerase in stem cells a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:22723415
Wnt/β-catenin signaling regulates telomerase in stem cells and cancer cells.
|
|
GO:0002052
positive regulation of neuroblast proliferation
|
IMP
PMID:21325504 Frizzled3 is required for neurogenesis and target innervatio... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21325504
Frizzled3 is required for neurogenesis and target innervation during sympathetic nervous system development.
|
|
GO:0045976
negative regulation of mitotic cell cycle, embryonic
|
IMP
PMID:21325504 Frizzled3 is required for neurogenesis and target innervatio... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21325504
Frizzled3 is required for neurogenesis and target innervation during sympathetic nervous system development.
|
|
GO:0061549
sympathetic ganglion development
|
IMP
PMID:21325504 Frizzled3 is required for neurogenesis and target innervatio... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21325504
Frizzled3 is required for neurogenesis and target innervation during sympathetic nervous system development.
|
|
GO:0005515
protein binding
|
IPI
PMID:23856522 Jmjd3 controls mesodermal and cardiovascular differentiation... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23856522
2013 Jul 15. Jmjd3 controls mesodermal and cardiovascular differentiation of embryonic stem cells.
|
|
GO:0005634
nucleus
|
IDA
PMID:23856522 Jmjd3 controls mesodermal and cardiovascular differentiation... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23856522
2013 Jul 15. Jmjd3 controls mesodermal and cardiovascular differentiation of embryonic stem cells.
|
|
GO:0016922
nuclear receptor binding
|
IPI
PMID:14687547 RORalpha coordinates reciprocal signaling in cerebellar deve... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:14687547
RORalpha coordinates reciprocal signaling in cerebellar development through sonic hedgehog and calcium-dependent pathways.
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GO:0033234
negative regulation of protein sumoylation
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0048643
positive regulation of skeletal muscle tissue development
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IMP
PMID:23460868 β-catenin is essential for efficient in vitro premyogenic me... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:23460868
β-catenin is essential for efficient in vitro premyogenic mesoderm formation but can be partially compensated by retinoic acid signalling.
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GO:0005515
protein binding
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IPI
PMID:11590244 alphaT-catenin: a novel tissue-specific beta-catenin-binding... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:11590244
alphaT-catenin: a novel tissue-specific beta-catenin-binding protein mediating strong cell-cell adhesion.
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GO:0036023
embryonic skeletal limb joint morphogenesis
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IGI
PMID:21262216 The zinc finger transcription factors Osr1 and Osr2 control ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21262216
Jan 22. The zinc finger transcription factors Osr1 and Osr2 control synovial joint formation.
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GO:0045294
alpha-catenin binding
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IPI
PMID:21393547 A polarized epithelium organized by beta- and alpha-catenin ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:21393547
A polarized epithelium organized by beta- and alpha-catenin predates cadherin and metazoan origins.
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GO:0005515
protein binding
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IPI
PMID:18636119 Coxsackievirus and adenovirus receptor (CAR) mediates atriov... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:18636119
Coxsackievirus and adenovirus receptor (CAR) mediates atrioventricular-node function and connexin 45 localization in the murine heart.
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GO:0072182
regulation of nephron tubule epithelial cell differentiation
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IMP
PMID:19112489 Gata3 acts downstream of beta-catenin signaling to prevent e... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19112489
2008 Dec 26. Gata3 acts downstream of beta-catenin signaling to prevent ectopic metanephric kidney induction.
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GO:0045893
positive regulation of DNA-templated transcription
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IMP
PMID:19112489 Gata3 acts downstream of beta-catenin signaling to prevent e... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19112489
2008 Dec 26. Gata3 acts downstream of beta-catenin signaling to prevent ectopic metanephric kidney induction.
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GO:0071944
cell periphery
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0005938
cell cortex
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0007155
cell adhesion
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0008285
negative regulation of cell population proliferation
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0010909
positive regulation of heparan sulfate proteoglycan biosynthetic process
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0016342
catenin complex
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0030054
cell junction
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0030877
beta-catenin destruction complex
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0030997
regulation of centriole-centriole cohesion
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0032355
response to estradiol
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0032993
protein-DNA complex
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0034333
adherens junction assembly
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0034394
protein localization to cell surface
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0043065
positive regulation of apoptotic process
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0045944
positive regulation of transcription by RNA polymerase II
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0048471
perinuclear region of cytoplasm
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0048660
regulation of smooth muscle cell proliferation
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0061154
endothelial tube morphogenesis
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0070369
beta-catenin-TCF7L2 complex
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0071363
cellular response to growth factor stimulus
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0071681
cellular response to indole-3-methanol
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0090279
regulation of calcium ion import
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:2000008
regulation of protein localization to cell surface
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ISS
GO_REF:0000024 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0005515
protein binding
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IPI
PMID:20802155 Sox17 modulates Wnt3A/beta-catenin-mediated transcriptional ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20802155
Sox17 modulates Wnt3A/beta-catenin-mediated transcriptional activation of the Lef-1 promoter.
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GO:0034750
Scrib-APC-beta-catenin complex
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IDA
PMID:16611247 Human scribble, a novel tumor suppressor identified as a tar... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16611247
Human scribble, a novel tumor suppressor identified as a target of high-risk HPV E6 for ubiquitin-mediated degradation, interacts with adenomatous polyposis coli.
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GO:0005813
centrosome
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IDA
PMID:20300119 Conductin/axin2 and Wnt signalling regulates centrosome cohe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20300119
Conductin/axin2 and Wnt signalling regulates centrosome cohesion.
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GO:0070602
regulation of centromeric sister chromatid cohesion
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IMP
PMID:20300119 Conductin/axin2 and Wnt signalling regulates centrosome cohe... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20300119
Conductin/axin2 and Wnt signalling regulates centrosome cohesion.
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GO:0003713
transcription coactivator activity
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IDA
PMID:12949260 Wnt4 overexpression disrupts normal testicular vasculature a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12949260
Wnt4 overexpression disrupts normal testicular vasculature and inhibits testosterone synthesis by repressing steroidogenic factor 1/beta-catenin synergy.
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GO:0045893
positive regulation of DNA-templated transcription
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IDA
PMID:12949260 Wnt4 overexpression disrupts normal testicular vasculature a... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:12949260
Wnt4 overexpression disrupts normal testicular vasculature and inhibits testosterone synthesis by repressing steroidogenic factor 1/beta-catenin synergy.
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GO:0005515
protein binding
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IPI
PMID:20413591 The TRPV4 channel contributes to intercellular junction form... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20413591
2010 Apr 22. The TRPV4 channel contributes to intercellular junction formation in keratinocytes.
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GO:0003223
ventricular compact myocardium morphogenesis
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0010718
positive regulation of epithelial to mesenchymal transition
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0060038
cardiac muscle cell proliferation
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0060485
mesenchyme development
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0060947
cardiac vascular smooth muscle cell differentiation
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0060982
coronary artery morphogenesis
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0060983
epicardium-derived cardiac vascular smooth muscle cell differentiation
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0072132
mesenchyme morphogenesis
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TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:20299672
Epicardial-myocardial signaling directing coronary vasculogenesis.
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GO:0140297
DNA-binding transcription factor binding
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IPI
PMID:17331723 Inhibitory Gli3 activity negatively regulates Wnt/beta-caten... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:17331723
Mar 1. Inhibitory Gli3 activity negatively regulates Wnt/beta-catenin signaling.
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GO:0005515
protein binding
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IPI
PMID:16611247 Human scribble, a novel tumor suppressor identified as a tar... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16611247
Human scribble, a novel tumor suppressor identified as a target of high-risk HPV E6 for ubiquitin-mediated degradation, interacts with adenomatous polyposis coli.
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GO:0005515
protein binding
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IPI
PMID:19458197 Scribble interacts with beta-catenin to localize synaptic ve... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:19458197
2009 May 20. Scribble interacts with beta-catenin to localize synaptic vesicles to synapses.
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GO:0005515
protein binding
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IPI
PMID:10954424 The mammalian homologue of the Caenorhabditis elegans polari... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:10954424
The mammalian homologue of the Caenorhabditis elegans polarity protein PAR-6 is a binding partner for the Rho GTPases Cdc42 and Rac1.
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GO:0019903
protein phosphatase binding
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IPI
PMID:16973135 Intracellular substrates of brain-enriched receptor protein ... |
PENDING |
Summary: TODO: Review this GOA annotation
Supporting Evidence:
PMID:16973135
2006 Sep 14. Intracellular substrates of brain-enriched receptor protein tyrosine phosphatase rho (RPTPrho/PTPRT).
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GO:0005829
cytosol
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TAS
Reactome:R-MMU-209096 |
PENDING |
Summary: TODO: Review this GOA annotation
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Q: How does β-catenin coordinate its dual roles in cell adhesion and Wnt signaling, and what mechanisms prevent crosstalk?
Q: What determines the tissue-specific requirements for β-catenin in development versus homeostasis?
Q: How do different β-catenin mutations lead to distinct developmental disorders and cancer types?
Q: What role does β-catenin play in stem cell maintenance and differentiation across different tissue types?
Experiment: Single-cell RNA sequencing of tissues with conditional β-catenin knockout to map cell-type-specific transcriptional programs
Experiment: Super-resolution microscopy to study β-catenin dynamics between adherens junctions and the nucleus during Wnt signaling
Experiment: Cryo-EM structural determination of β-catenin in complex with different binding partners like cadherins and TCF/LEF
Experiment: Lineage tracing in mouse models to study β-catenin function in stem cell fate decisions during development and regeneration
Generated using OpenAI Deep Research API
Ctnnb1 encodes β-catenin, an 88 kDa protein that plays a dual role in cell adhesion and intracellular signaling (www.ncbi.nlm.nih.gov). In cell adhesion, β-catenin is a key cytoplasmic component of the cadherin-catenin complex at adherens junctions, linking the cytoplasmic tail of E-cadherin to α-catenin and the actin cytoskeleton (www.ncbi.nlm.nih.gov). This linkage is crucial for the adhesive function of classical cadherins in forming stable cell–cell contacts in epithelial and other tissues (www.ncbi.nlm.nih.gov). β-Catenin also serves as a central effector in the canonical Wnt signaling pathway, which controls cell proliferation, differentiation, and fate during development and tissue homeostasis (www.ncbi.nlm.nih.gov). In the absence of Wnt signal, free β-catenin (not bound at cell junctions) is rapidly targeted for destruction: it is phosphorylated on N-terminal serine/threonine residues by a “destruction complex” consisting of AXIN, APC, casein kinase 1, and GSK3β, followed by β-TrCP-mediated ubiquitination and proteasomal degradation (www.ncbi.nlm.nih.gov). However, when Wnt ligands are present, this destruction complex is inhibited, allowing β-catenin to stabilize and accumulate in the cytoplasm and eventually translocate into the nucleus (www.ncbi.nlm.nih.gov). In the nucleus, β-catenin acts as a co-activator for TCF/LEF transcription factors, forming a transcriptional complex that drives expression of Wnt target genes (www.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov). Through these mechanisms, β-catenin links external Wnt signals to changes in gene expression, while also anchoring cell–cell adhesion complexes – a combination of functions that underscores its central role in signal transduction and cell structure (www.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov).
β-Catenin is predominantly found at the plasma membrane in cells, localized to adherens junctions (GO:0005912) where it complexes with cadherins and other catenins in the apicolateral and basolateral membrane regions of epithelial cells (www.informatics.jax.org). This membrane-associated pool of β-catenin is structural, contributing to cell junction assembly and maintenance. A significant portion of β-catenin also exists in the cytosol (GO:0005829), where it is either en route to degradation or poised for signaling. Cytosolic β-catenin participates in the β-catenin destruction complex (GO:1990907) (also referred to as the Axin-APC Wnt signalosome), a multi-protein complex that regulates β-catenin stability in the absence of Wnt signals (www.informatics.jax.org) (genular.atomic-lab.org). Upon Wnt pathway activation, stabilized β-catenin accumulates and translocates to the nucleus (GO:0005634) (www.ncbi.nlm.nih.gov). In the nucleus, β-catenin associates with chromatin (particularly euchromatin) as part of transcriptional complexes, co-activating gene expression programs (www.informatics.jax.org). Notably, β-catenin has been observed in specific subcellular structures: for example, it is a component of the Scribble-APC-β-catenin complex (implicated in cell polarity/signaling) and has been detected in neuronal synapses, including the postsynaptic density and synaptic membranes in hippocampal neurons (www.informatics.jax.org). This distribution reflects β-catenin’s ability to shuttle between the cell membrane, cytoplasm, and nucleus, acting in both structural cell adhesion contexts and gene regulatory contexts as needed.
β-Catenin is involved in a wide array of biological processes, consistent with its structural and signaling functions. It is a pivotal mediator of the canonical Wnt signaling pathway (GO:0060070), driving cell fate specification and embryonic patterning. During embryogenesis, β-catenin is required for processes such as embryonic morphogenesis and axis specification, as initially shown by studies in model organisms where ectopic β-catenin can induce a secondary body axis (pubmed.ncbi.nlm.nih.gov). In organ development, β-catenin plays essential roles; for instance, it functions in nervous system development and the regulation of neurogenesis, as well as in the formation of organs like the kidney, lungs, and limbs (www.informatics.jax.org) (www.informatics.jax.org). At the cellular level, β-catenin is crucial for cell–cell adhesion (GO:0007155), working as part of adherens junctions that are necessary for maintaining epithelial layer integrity (www.proteinatlas.org). It also participates in the control of gene transcription by RNA polymerase II, reflecting its role as a transcriptional co-regulator in the nucleus (www.informatics.jax.org). β-Catenin activity influences processes like cell proliferation and differentiation, and it has been implicated in epithelial-to-mesenchymal transition (EMT), a process important in development and cancer metastasis (consistent with its Wnt signaling function). In the context of the nervous system, β-catenin contributes to synapse formation and plasticity; for example, it has been shown to affect synaptic signaling and neurotransmission in neuronal circuits (which may underlie some neurodevelopmental effects) (www.informatics.jax.org). Overall, Ctnnb1/β-catenin is annotated to numerous biological process terms, ranging from cell adhesion and signal transduction to tissue morphogenesis and regulation of cell cycle and apoptosis, highlighting its broad functional involvement (www.informatics.jax.org) (genular.atomic-lab.org).
The β-catenin protein (781 amino acids in mouse) contains several defined regions that correspond to its functional domains. Its central portion (~~ residues 134–697) consists of a series of 12 tandem Armadillo repeats, a 42-amino-acid motif that classifies β-catenin as a member of the Armadillo repeat protein family (pubmed.ncbi.nlm.nih.gov). These Armadillo repeats fold together into a superhelical structure that forms a positively-charged groove, which serves as a versatile protein–protein interaction interface (pubmed.ncbi.nlm.nih.gov). Through this interface, β-catenin directly binds multiple partners, including the cytoplasmic tail of cadherins, TCF/LEF transcription factors, and the APC tumor suppressor protein (pubmed.ncbi.nlm.nih.gov). The N-terminal region of β-catenin contains several critical phosphorylation sites (Ser/Thr residues) that regulate its stability. In the absence of Wnt, these N-terminal residues (e.g. Ser33/37/Thr41 in human β-catenin) are phosphorylated by casein kinase 1 and GSK3β, marking β-catenin for ubiquitin-mediated degradation (www.ncbi.nlm.nih.gov). This N-terminal “degron” thus acts as a regulatory domain controlling β-catenin’s half-life. In contrast, the C-terminal region of β-catenin (approximately last 100 amino acids) is largely unstructured and is known as the transactivation domain. This C-terminal domain is necessary for β-catenin’s role in gene activation – it engages transcriptional co-activators and components of the basal transcription machinery. For example, experiments in Xenopus have shown that the C-terminal transactivation domain of β-catenin is required to drive Wnt target gene expression during axis formation (pubmed.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov). A fusion of β-catenin’s C-terminal domain to a DNA-binding protein can induce transcription and developmental effects, whereas β-catenin lacking the C-terminus cannot activate target genes effectively (pubmed.ncbi.nlm.nih.gov). Thus, structurally, β-catenin can be viewed as having a modular architecture: an N-terminal regulatory domain, a central Armadillo-repeat domain for protein interactions (scaffold for adhesion and signaling complexes), and a C-terminal domain for transcriptional activation. This architecture allows β-catenin to serve as both a scaffolding protein (at cell junctions and in multiprotein complexes) and a gene regulator, depending on context (pubmed.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov).
Given its fundamental roles, it is not surprising that Ctnnb1/β-catenin is implicated in various diseases and developmental disorders. In humans, heterozygous loss-of-function mutations in CTNNB1 cause a rare autosomal dominant neurodevelopmental disorder (sometimes termed “CTNNB1 syndrome”), characterized by intellectual disability, spastic diplegia, and often congenital retinal dystrophy or exudative vitreoretinopathy due to impaired Wnt signaling in the eye (www.informatics.jax.org). Indeed, familial exudative vitreoretinopathy 7 (FEVR7) is caused by CTNNB1 mutations that disrupt Wnt-mediated vascular development in the retina (www.informatics.jax.org). Mouse models have been used to study autism spectrum disorder and other neuropsychiatric conditions, since alterations in β-catenin/ Wnt signaling or cell adhesion in the brain can lead to synaptic and behavioral defects (www.informatics.jax.org). On the other end of the spectrum, gain-of-function mutations in Ctnnb1 (especially those that stabilize β-catenin by preventing N-terminal phosphorylation) are oncogenic. β-Catenin is a well-known proto-oncogene: somatic CTNNB1 mutations or defects in its regulators (like APC) lead to excessive Wnt signaling, driving uncontrolled cell proliferation. Such activating mutations in CTNNB1 are found in a variety of cancers, notably colorectal cancer (CRC), hepatocellular carcinoma, medulloblastoma, ovarian cancer, and benign tumors like pilomatrixomas (www.informatics.jax.org) (www.proteinatlas.org). In fact, β-catenin’s involvement in colon cancer was first recognized through its binding to the APC protein, which is mutated in familial adenomatous polyposis coli – loss of APC leads to β-catenin accumulation and transcription of oncogenic Wnt targets (www.proteinatlas.org) (www.proteinatlas.org). Aside from cancer, tissue-specific Ctnnb1 mutations can cause developmental defects; for example, conditional deletion of Ctnnb1 in limb mesenchyme or other contexts results in failures of proper tissue development (due to loss of Wnt signaling in those cells). Germline knockout of Ctnnb1 in mice is embryonic lethal – embryos lacking β-catenin cannot complete pre-implantation development properly, partly because the blastomeres fail to remain adherent without β-catenin-mediated adhesion, causing embryo fragmentation (pubmed.ncbi.nlm.nih.gov). In chimeric or conditional settings, β-catenin–deficient embryos show severe gastrulation and patterning defects, underscoring its requirement in early embryonic cell fates. In summary, perturbations of β-catenin activity are associated with a spectrum of phenotypes: developmental disorders when β-catenin function is reduced, and oncogenesis when β-catenin function is hyperactive or unregulated.
Ctnnb1 is expressed ubiquitously in the mouse, with particularly high expression in certain developing and adult tissues. During embryogenesis, β-catenin mRNA and protein are detected in many tissues, with notable levels in the central nervous system (e.g., embryonic brain) and in limb buds during mid-gestation (www.ncbi.nlm.nih.gov). As development progresses and in adult mice, Ctnnb1 continues to be broadly expressed. β-Catenin is highly expressed in self-renewing and progenitor cell populations – for instance, in the intestinal epithelium, which has a high turnover, β-catenin is expressed in crypt progenitor cells where Wnt signaling actively drives proliferation. A survey of CTNNB1 expression (human data, which parallels mouse) indicates it is widely expressed in multiple tissues and organs, with especially high levels observed in brain, uterus, lung, bladder, and kidney (pmc.ncbi.nlm.nih.gov). In the adult brain, β-catenin is enriched in regions like the cortex and hippocampus, consistent with its roles in synaptic function and neurogenesis (pmc.ncbi.nlm.nih.gov). The regulation of Ctnnb1 expression itself can be tissue-specific: recent studies have identified tissue-specific enhancers that modulate Ctnnb1 transcription in certain contexts (for example, an intestinal enhancer element that fine-tunes β-catenin levels to balance normal gut homeostasis versus tumorigenesis) (pmc.ncbi.nlm.nih.gov). Post-transcriptionally, the abundance of β-catenin protein in cells is chiefly regulated by the Wnt-dependent stabilization/degradation mechanism described earlier, rather than large changes in mRNA levels. Thus, while Ctnnb1 is constitutively expressed in most cell types (house-keeping role in adhesion), the activation state of β-catenin (and hence its function in signaling) is tightly controlled by upstream signals. Additionally, certain external factors and signaling pathways can influence β-catenin’s activity and localization – for instance, growth factors and hormones may modulate GSK3β activity or cadherin availability, indirectly affecting β-catenin. In summary, β-catenin is broadly and constitutively expressed in mammals, reflecting its fundamental role, and its activity is primarily regulated by protein stability and dynamic localization rather than on/off gene expression. This widespread expression pattern aligns with the diverse requirement for β-catenin in various cell types and organs throughout development and adulthood (www.informatics.jax.org) (pmc.ncbi.nlm.nih.gov).
β-Catenin is highly conserved across metazoan species, underscoring its importance in essential cellular processes. The human CTNNB1 gene is orthologous to mouse Ctnnb1 with a high degree of sequence identity, and both encode β-catenin proteins with virtually identical domain structures (www.informatics.jax.org). Orthologs of β-catenin exist in all vertebrates and even in more distant animals. In Drosophila melanogaster, for example, the β-catenin homologue is called Armadillo (arm), which was originally discovered as a segment-polarity gene. Armadillo performs the same dual functions as vertebrate β-catenin: it is required for Wingless (Wnt) signaling and for assembly of adherens junctions in the fly (pubmed.ncbi.nlm.nih.gov). Studies in Drosophila have demonstrated that the molecular interactions are conserved – Armadillo binds to DE-cadherin and fly α-catenin for adhesion, and translocates to the nucleus to interact with Pangolin (fly TCF) for gene regulation (pubmed.ncbi.nlm.nih.gov). The conservation extends to the level of protein domains (the Armadillo repeat motifs are present in fly Armadillo and show high similarity to those in mouse β-catenin) and function. In Caenorhabditis elegans (nematode), the β-catenin functions are split between multiple paralogous proteins, due to an ancient gene duplication. C. elegans has at least two β-catenin-like proteins: HMP-2, which exclusively mediates cell–cell adhesion by partnering with the single worm cadherin (HMR-1), and BAR-1, which is dedicated to Wnt signaling, forming a complex with POP-1 (TCF) to activate Wnt target genes (pubmed.ncbi.nlm.nih.gov). This suggests that the ancestral β-catenin’s combined roles were partitioned in certain lineages (in worms and some insects) (pubmed.ncbi.nlm.nih.gov), whereas in vertebrates and fruit flies a single protein retains both functions. The core Wnt/β-catenin signaling pathway is thought to be ancient, as even primitive metazoans have Wnt ligands and β-catenin-like molecules to control developmental patterning. The cadherin–catenin cell adhesion complex is also an ancient invention of multicellular animals, indicating β-catenin has been a central player in multicellularity. Overall, the structure and function of β-catenin have been strongly conserved through evolution, from invertebrates to mammals, reflecting the essential and universal nature of Wnt signaling and cadherin-based adhesion in animal biology (pubmed.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov).
The functional understanding of β-catenin has been built through classic experiments in cell biology, developmental biology, and genetics. Early biochemical studies that co-immunoprecipitated E-cadherin complexes identified β-catenin (originally as an 88 kDa protein) as a cadherin-associated protein, linking cadherins to the cytoskeleton. This finding explained how cadherins, via catenins, transmit contact inhibition signals to stop cell division once an epithelial layer is confluent (www.proteinatlas.org). Genetic studies in Drosophila were pivotal: mutants in the armadillo gene were found to have disrupted segment development (due to failed Wingless signaling) and loss of epithelial integrity, highlighting both signaling and adhesion roles. A landmark Drosophila structure-function analysis used armadillo mutants to map β-catenin’s functional domains: it revealed that distinct regions of the protein mediate adhesion vs. Wnt signaling, and that these functions can be uncoupled (pubmed.ncbi.nlm.nih.gov) (pubmed.ncbi.nlm.nih.gov). For example, the binding sites for DE-cadherin and α-catenin on Armadillo were mapped, and both interactions were shown to be required for adherens junction function (pubmed.ncbi.nlm.nih.gov). Separately, two regions crucial for Wingless/Wnt signaling were identified, and it was demonstrated that Armadillo protein accumulates in the nucleus to transmit the Wingless signal (pubmed.ncbi.nlm.nih.gov). These experiments provided direct evidence that β-catenin moves to the nucleus and that its roles in adhesion and signaling are molecularly separable (pubmed.ncbi.nlm.nih.gov). In vertebrates, a classic experiment in Xenopus laevis showed that microinjection of β-catenin mRNA into early embryos leads to the formation of a secondary body axis, effectively duplicating the embryonic organizer – a powerful demonstration that β-catenin activation is sufficient to induce major developmental programs (a hallmark of Wnt signaling) (pubmed.ncbi.nlm.nih.gov). Conversely, blockade of β-catenin (or its co-factor TCF) in embryos causes loss of dorsal structures, confirming its necessity in axis formation. In mouse models, Ctnnb1 knockout studies underscored the protein’s essential functions: embryos entirely lacking β-catenin arrest early in development. Notably, zygotic Ctnnb1 null embryos fail to complete blastocyst implantation, in part because their cells cannot adhere properly (blastomeres in β-catenin–deficient embryos tend to dissociate) (pubmed.ncbi.nlm.nih.gov). Conditional knockouts have further revealed tissue-specific requirements – for instance, deleting β-catenin in neural progenitors or in synaptic proteins has been shown to cause defects in synapse development and behavior, linking β-catenin to neurological phenotypes (e.g., autism-like behaviors in mice) (www.informatics.jax.org). In cancer biology, key evidence for β-catenin’s role came from the discovery of CTNNB1 mutations in tumors and from cell culture experiments: introducing stable, mutant β-catenin into normal cells drives them to adopt cancer-like traits, such as loss of contact inhibition and anchorage-independent growth. For example, one study showed that oncogenic β-catenin can block anoikis (detachment-induced cell death) in kidney and intestinal epithelial cells, promoting their survival and growth in suspension (www.proteinatlas.org). Structural biology has also contributed to our understanding: the crystal structure of β-catenin’s Armadillo repeat domain revealed how it forms a scaffold to accommodate various binding partners (pubmed.ncbi.nlm.nih.gov). This structural insight has guided the design of inhibitors that disrupt β-catenin’s interaction with TCF or other partners as potential therapeutic strategies in Wnt-driven cancers. Together, these experimental findings from diverse approaches provide a comprehensive picture of β-catenin as a protein that is indispensable for developmental processes and tissue architecture, and when dysregulated, a driver of disease.
The multifaceted roles of Ctnnb1/β-catenin are captured by numerous Gene Ontology annotations, supported by experimental evidence in mouse and other species. Key GO terms associated with this gene include:
(β-Catenin has also been noted as a transcription co-activator, facilitating RNA polymerase II transcription, which corresponds to its role in transcription regulation.)
Biological Process (BP):
(Additional processes: β-catenin is also linked to cell proliferation, apoptosis regulation, stem cell maintenance, and axis specification as evidenced by various studies.)
Cellular Component (CC):
Each of these GO terms is supported by experimental evidence (e.g., physical binding assays, localization studies, mutant phenotypes) from the literature. These annotations are useful for capturing the multi-functional nature of β-catenin in Gene Ontology, aiding curators and researchers in understanding the gene’s roles in a structured, searchable manner.
Exported on March 22, 2026 at 01:25 AM
Organism: Mus musculus
Sequence:
MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEALGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL
I begin with the InterPro architecture. The sequence is assigned to IPR013284 (Beta-catenin family, residues 3–781), establishing membership in the beta-catenin/plakoglobin/plastin lineage that forms armadillo-repeat scaffolds. Nested within this, IPR011989 (Armadillo-like helical homologous superfamily, residues 123–666) and IPR016024 (Armadillo-type fold homologous superfamily, residues 135–664) define a central alpha-helical solenoid composed of tandem armadillo repeats. The repeat core is explicitly captured by IPR000225 (Armadillo repeat, residues 141–664). This ordered array of armadillo repeats creates an extended, positively charged groove that binds diverse partners—classically cadherin cytoplasmic tails and catenins—through multivalent, shape-complementary interactions. The N-terminal family signature and C-terminal tail together tune affinity and selectivity, causing robust protein–protein interaction capacity rather than catalysis.
This armadillo-repeat scaffold dictates molecular function as a binding hub. The repeat architecture generates high-affinity surfaces for assembling multiprotein complexes, supporting GO:0005515 protein binding as the primary molecular function. In beta-catenin family proteins, the same scaffold often coordinates junctional assemblies and transcriptional regulators; here, the absence of enzymatic motifs and the dominance of repeat-mediated interfaces argue that binding and scaffolding—not enzymatic activity—are the core functions.
From function to process, the armadillo scaffold couples two major pathways. First, it nucleates adherens junctions by docking to cadherin cytoplasmic domains and recruiting other catenins, driving cell–cell adhesion and junction maturation—central to adherens junction assembly and maintenance. Second, members of this family can shuttle to nuclear complexes and modulate transcriptional programs; although this isoform’s detailed roles are not fully resolved, the capacity of the armadillo core to assemble regulatory complexes rationalizes participation in signal-responsive gene control that coordinates with junctional signaling.
The cellular context follows directly from the scaffold’s role. The absence of transmembrane segments and the presence of extensive interaction surfaces predict a soluble cytoplasmic protein that concentrates at cell–cell junctions. This matches a junctional adaptor that operates at adherens junctions while remaining cytoplasmic when not bound, aligning with the observed cytoplasm/cytostroma and junctional enrichment.
Mechanistically, I hypothesize that this armadillo-repeat scaffold forms a high-avidity platform at adherens junctions, binding cadherin tails and recruiting alpha-catenin/plakophilins to stabilize the adhesion complex. Dynamic exchange with cytoplasmic pools likely allows regulated assembly with transcriptional co-regulators under signaling cues. Likely partners include classical cadherins and the catenin network at junctions, with transient associations to transcriptional regulators that tune adhesion-coupled gene expression.
A cytoplasmic armadillo-repeat scaffold that concentrates at cell–cell junctions to organize multiprotein assemblies. By using a tandem helical repeat core, it binds cytoplasmic adhesion receptors and junctional adaptors to stabilize adherens junction architecture while dynamically exchanging with soluble pools. This binding-driven mechanism positions it to coordinate adhesion with signal-responsive gene regulation, operating predominantly at junctions within the cytoplasmic compartment.
Not yet known.
IPR013284, family) — residues 3-781IPR011989, homologous_superfamily) — residues 123-666IPR016024, homologous_superfamily) — residues 135-664IPR000225, repeat) — residues 141-664Molecular Function: molecular_function (GO:0003674), molecular function regulator activity (GO:0098772), binding (GO:0005488), transcription regulator activity (GO:0140110), molecular function activator activity (GO:0140677), heterocyclic compound binding (GO:1901363), chromatin binding (GO:0003682), organic cyclic compound binding (GO:0097159), transcription coregulator activity (GO:0003712), protein binding (GO:0005515), transcription factor binding (GO:0008134), nucleic acid binding (GO:0003676), alpha-catenin binding (GO:0045294), protein domain specific binding (GO:0019904), cell adhesion molecule binding (GO:0050839), enzyme binding (GO:0019899), transcription coactivator activity (GO:0003713), cadherin binding (GO:0045296), DNA-binding transcription factor binding (GO:0140297), kinase binding (GO:0019900), transcription coregulator binding (GO:0001221), disordered domain specific binding (GO:0097718), histone methyltransferase binding (GO:1990226), phosphatase binding (GO:0019902), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), protein kinase binding (GO:0019901), protein phosphatase binding (GO:0019903), nuclear receptor binding (GO:0016922)
Biological Process: biological_process (GO:0008150), biological regulation (GO:0065007), response to stimulus (GO:0050896), reproductive process (GO:0022414), regulation of biological process (GO:0050789), reproduction (GO:0000003), multicellular organismal process (GO:0032501), metabolic process (GO:0008152), homeostatic process (GO:0042592), immune system process (GO:0002376), localization (GO:0051179), signaling (GO:0023052), growth (GO:0040007), negative regulation of biological process (GO:0048519), positive regulation of biological process (GO:0048518), developmental process (GO:0032502), cellular process (GO:0009987), anatomical structure development (GO:0048856), negative regulation of signaling (GO:0023057), developmental process involved in reproduction (GO:0003006), multicellular organismal-level homeostasis (GO:0048871), anatomical structure formation involved in morphogenesis (GO:0048646), regulation of biological quality (GO:0065008), regulation of response to stimulus (GO:0048583), developmental maturation (GO:0021700), negative regulation of cellular process (GO:0048523), biosynthetic process (GO:0009058), establishment of localization (GO:0051234), macromolecule localization (GO:0033036), developmental growth (GO:0048589), leukocyte activation (GO:0045321), cell population proliferation (GO:0008283), nitrogen compound metabolic process (GO:0006807), negative regulation of multicellular organismal process (GO:0051241), cell death (GO:0008219), regulation of signaling (GO:0023051), negative regulation of developmental process (GO:0051093), signal transduction (GO:0007165), cell activation (GO:0001775), tissue remodeling (GO:0048771), immune system development (GO:0002520), developmental induction (GO:0031128), morphogenesis of a branching structure (GO:0001763), positive regulation of developmental process (GO:0051094), negative regulation of response to stimulus (GO:0048585), sexual reproduction (GO:0019953), cellular localization (GO:0051641), positive regulation of multicellular organismal process (GO:0051240), molting cycle (GO:0042303), pattern specification process (GO:0007389), cellular component organization or biogenesis (GO:0071840), regulation of multicellular organismal process (GO:0051239), negative regulation of metabolic process (GO:0009892), positive regulation of reproductive process (GO:2000243), cellular process involved in reproduction in multicellular organism (GO:0022412), regulation of cellular process (GO:0050794), cellular response to stimulus (GO:0051716), cellular developmental process (GO:0048869), organ growth (GO:0035265), regulation of metabolic process (GO:0019222), positive regulation of response to stimulus (GO:0048584), molting cycle process (GO:0022404), ossification (GO:0001503), regulation of molecular function (GO:0065009), cell communication (GO:0007154), positive regulation of cellular process (GO:0048522), anatomical structure morphogenesis (GO:0009653), cell motility (GO:0048870), regulation of reproductive process (GO:2000241), multicellular organism reproduction (GO:0032504), cell-cell signaling (GO:0007267), regulation of developmental process (GO:0050793), negative regulation of immune system process (GO:0002683), response to endogenous stimulus (GO:0009719), organelle localization (GO:0051640), positive regulation of signaling (GO:0023056), multicellular organism development (GO:0007275), cell adhesion (GO:0007155), regulation of immune system process (GO:0002682), organic substance metabolic process (GO:0071704), cellular metabolic process (GO:0044237), positive regulation of metabolic process (GO:0009893), multicellular organismal reproductive process (GO:0048609), primary metabolic process (GO:0044238), neural precursor cell proliferation (GO:0061351), hypothalamus development (GO:0021854), tube formation (GO:0035148), regulation of response to stress (GO:0080134), stem cell proliferation (GO:0072089), animal organ development (GO:0048513), regulation of hemopoiesis (GO:1903706), negative regulation of vasculature development (GO:1901343), negative regulation of hemopoiesis (GO:1903707), synaptic signaling (GO:0099536), regulation of anatomical structure morphogenesis (GO:0022603), negative regulation of cell cycle (GO:0045786), nephron development (GO:0072006), midbrain development (GO:0030901), positive regulation of nitrogen compound metabolic process (GO:0051173), positive regulation of cell differentiation (GO:0045597), appendage development (GO:0048736), germ cell development (GO:0007281), organic substance biosynthetic process (GO:1901576), animal organ formation (GO:0048645), cell-cell signaling by wnt (GO:0198738), positive regulation of muscle tissue development (GO:1901863), regulation of cellular response to stress (GO:0080135), hindbrain development (GO:0030902), cellular biosynthetic process (GO:0044249), macromolecule metabolic process (GO:0043170), positive regulation of biosynthetic process (GO:0009891), muscle structure development (GO:0061061), regulation of cell population proliferation (GO:0042127), regulation of cell death (GO:0010941), regionalization (GO:0003002), negative regulation of cell differentiation (GO:0045596), transport (GO:0006810), regulation of cellular metabolic process (GO:0031323), positive regulation of cell communication (GO:0010647), hair cycle process (GO:0022405), regulation of primary metabolic process (GO:0080090), ectodermal placode development (GO:0071696), negative regulation of signal transduction (GO:0009968), negative regulation of cell death (GO:0060548), cell differentiation (GO:0030154), negative regulation of nervous system development (GO:0051961), system development (GO:0048731), myoblast proliferation (GO:0051450), ectodermal placode formation (GO:0060788), regulation of leukocyte activation (GO:0002694), regulation of binding (GO:0051098), heart growth (GO:0060419), tube development (GO:0035295), cell morphogenesis (GO:0000902), regulation of cell cycle (GO:0051726), animal organ morphogenesis (GO:0009887), cell maturation (GO:0048469), regulation of myelination (GO:0031641), apoptotic signaling pathway (GO:0097190), pallium development (GO:0021543), cell surface receptor signaling pathway (GO:0007166), sex differentiation (GO:0007548), regulation of cellular component organization (GO:0051128), cranial skeletal system development (GO:1904888), cell-substrate adhesion (GO:0031589), positive regulation of cell population proliferation (GO:0008284), tube morphogenesis (GO:0035239), negative regulation of cell communication (GO:0010648), axis specification (GO:0009798), cell-cell adhesion (GO:0098609), hair follicle morphogenesis (GO:0031069), morphogenesis of a branching epithelium (GO:0061138), cardiac chamber development (GO:0003205), negative regulation of cellular metabolic process (GO:0031324), cell fate commitment (GO:0045165), cell fate determination (GO:0001709), embryonic morphogenesis (GO:0048598), lens development in camera-type eye (GO:0002088), tissue homeostasis (GO:0001894), hematopoietic or lymphoid organ development (GO:0048534), negative regulation of cartilage development (GO:0061037), hair cycle (GO:0042633), regulation of signal transduction (GO:0009966), foregut morphogenesis (GO:0007440), regulation of macromolecule metabolic process (GO:0060255), reproductive structure development (GO:0048608), cellular aromatic compound metabolic process (GO:0006725), vesicle localization (GO:0051648), positive regulation of epithelial to mesenchymal transition (GO:0010718), regulation of cellular component biogenesis (GO:0044087), establishment of organelle localization (GO:0051656), negative regulation of macromolecule metabolic process (GO:0010605), regulation of morphogenesis of a branching structure (GO:0060688), muscle cell proliferation (GO:0033002), embryo development (GO:0009790), regulation of cell cycle process (GO:0010564), regulation of cell activation (GO:0050865), nerve development (GO:0021675), regulation of catalytic activity (GO:0050790), negative regulation of nitrogen compound metabolic process (GO:0051172), cerebral cortex development (GO:0021987), positive regulation of molecular function (GO:0044093), positive regulation of macromolecule metabolic process (GO:0010604), blood vessel development (GO:0001568), telencephalon development (GO:0021537), heterocycle metabolic process (GO:0046483), establishment of localization in cell (GO:0051649), appendage morphogenesis (GO:0035107), cellular nitrogen compound metabolic process (GO:0034641), angiogenesis (GO:0001525), formation of primary germ layer (GO:0001704), regulation of multicellular organismal development (GO:2000026), diencephalon development (GO:0021536), positive regulation of cellular metabolic process (GO:0031325), bone remodeling (GO:0046849), regulation of DNA-binding transcription factor activity (GO:0051090), epithelial cell proliferation (GO:0050673), cellular macromolecule localization (GO:0070727), negative regulation of biosynthetic process (GO:0009890), male sex differentiation (GO:0046661), regulation of muscle tissue development (GO:1901861), regulation of cellular response to growth factor stimulus (GO:0090287), mesenchymal cell proliferation (GO:0010463), tissue morphogenesis (GO:0048729), programmed cell death (GO:0012501), cell development (GO:0048468), cardiac muscle tissue growth (GO:0055017), response to growth factor (GO:0070848), cell fate specification (GO:0001708), cellular response to endogenous stimulus (GO:0071495), regulation of synapse structure or activity (GO:0050803), lymphocyte activation (GO:0046649), anatomical structure maturation (GO:0071695), organic cyclic compound metabolic process (GO:1901360), genitalia morphogenesis (GO:0035112), lens morphogenesis in camera-type eye (GO:0002089), forebrain development (GO:0030900), regulation of nitrogen compound metabolic process (GO:0051171), hair follicle development (GO:0001942), nephron morphogenesis (GO:0072028), regulation of cell differentiation (GO:0045595), cellular component organization (GO:0016043), oocyte differentiation (GO:0009994), positive regulation of nervous system development (GO:0051962), cell migration (GO:0016477), positive regulation of animal organ morphogenesis (GO:0110110), positive regulation of signal transduction (GO:0009967), gamete generation (GO:0007276), intracellular signal transduction (GO:0035556), osteoblast differentiation (GO:0001649), cell surface receptor signaling pathway involved in cell-cell signaling (GO:1905114), positive regulation of cellular component organization (GO:0051130), embryonic pattern specification (GO:0009880), anatomical structure homeostasis (GO:0060249), tissue development (GO:0009888), nucleobase-containing compound metabolic process (GO:0006139), head development (GO:0060322), regulation of cell communication (GO:0010646), regulation of biosynthetic process (GO:0009889), cardiac chamber morphogenesis (GO:0003206), ectodermal placode morphogenesis (GO:0071697), positive regulation of morphogenesis of an epithelium (GO:1905332), endoderm development (GO:0007492), nephron epithelium development (GO:0072009), skeletal system morphogenesis (GO:0048705), regulation of synapse organization (GO:0050807), regulation of protein metabolic process (GO:0051246), cranial nerve development (GO:0021545), positive regulation of mesenchymal cell proliferation (GO:0002053), regulation of epithelial cell proliferation (GO:0050678), anterior/posterior axis specification (GO:0009948), cell-matrix adhesion (GO:0007160), synaptic vesicle cycle (GO:0099504), regulation of oxidative stress-induced cell death (GO:1903201), muscle cell differentiation (GO:0042692), neuron migration (GO:0001764), skeletal system development (GO:0001501), embryonic heart tube development (GO:0035050), cell surface receptor signaling pathway involved in heart development (GO:0061311), oocyte development (GO:0048599), circulatory system development (GO:0072359), regulation of response to oxidative stress (GO:1902882), forebrain cell migration (GO:0021885), cerebral cortex cell migration (GO:0021795), regulation of osteoblast differentiation (GO:0045667), regulation of cell proliferation involved in heart morphogenesis (GO:2000136), trachea development (GO:0060438), regulation of vasculature development (GO:1901342), positive regulation of epithelial cell differentiation (GO:0030858), response to fibroblast growth factor (GO:0071774), lung cell differentiation (GO:0060479), limb morphogenesis (GO:0035108), cell fate commitment involved in formation of primary germ layer (GO:0060795), epithelial tube formation (GO:0072175), positive regulation of macromolecule biosynthetic process (GO:0010557), chondrocyte differentiation (GO:0002062), positive regulation of histone methylation (GO:0031062), apoptotic process (GO:0006915), regulation of DNA binding (GO:0051101), I-kappaB kinase/NF-kappaB signaling (GO:0007249), regulation of nucleobase-containing compound metabolic process (GO:0019219), dorsal/ventral axis specification (GO:0009950), epithelium development (GO:0060429), positive regulation of organelle organization (GO:0010638), positive regulation of cellular biosynthetic process (GO:0031328), cellular response to growth factor stimulus (GO:0071363), regulation of animal organ formation (GO:0003156), regulation of epithelial cell differentiation (GO:0030856), respiratory system development (GO:0060541), regulation of mitotic cell cycle (GO:0007346), regulation of programmed cell death (GO:0043067), nephron epithelium morphogenesis (GO:0072088), gland development (GO:0048732), gastrulation (GO:0007369), cardiac ventricle development (GO:0003231), bone resorption (GO:0045453), morphogenesis of an epithelium (GO:0002009), positive regulation of neurogenesis (GO:0050769), skin development (GO:0043588), morphogenesis of embryonic epithelium (GO:0016331), coronary vasculature development (GO:0060976), branching morphogenesis of an epithelial tube (GO:0048754), cardiac ventricle morphogenesis (GO:0003208), regulation of myeloid cell differentiation (GO:0045637), embryonic organ development (GO:0048568), cell morphogenesis involved in differentiation (GO:0000904), renal tubule development (GO:0061326), regulation of skeletal muscle tissue development (GO:0048641), limbic system development (GO:0021761), negative regulation of myeloid cell differentiation (GO:0045638), nucleic acid metabolic process (GO:0090304), proximal/distal pattern formation (GO:0009954), branching involved in blood vessel morphogenesis (GO:0001569), regulation of chondrocyte differentiation (GO:0032330), negative regulation of cellular biosynthetic process (GO:0031327), negative regulation of Wnt signaling pathway (GO:0030178), regulation of animal organ morphogenesis (GO:2000027), negative regulation of nucleobase-containing compound metabolic process (GO:0045934), gene expression (GO:0010467), positive regulation of DNA-binding transcription factor activity (GO:0051091), renal system development (GO:0072001), glial cell fate commitment (GO:0021781), cardiac muscle cell proliferation (GO:0060038), neuroblast proliferation (GO:0007405), reproductive system development (GO:0061458), endoderm formation (GO:0001706), positive regulation of DNA metabolic process (GO:0051054), embryonic organ morphogenesis (GO:0048562), synaptic vesicle localization (GO:0097479), regulation of cell junction assembly (GO:1901888), positive regulation of cell development (GO:0010720), urogenital system development (GO:0001655), positive regulation of gene expression (GO:0010628), muscle organ morphogenesis (GO:0048644), regulation of mesenchymal cell proliferation (GO:0010464), negative regulation of oxidative stress-induced cell death (GO:1903202), regulation of apoptotic signaling pathway (GO:2001233), endodermal cell differentiation (GO:0035987), regulation of histone methylation (GO:0031060), positive regulation of binding (GO:0051099), positive regulation of nucleobase-containing compound metabolic process (GO:0045935), respiratory tube development (GO:0030323), prostate gland development (GO:0030850), glial cell migration (GO:0008347), trans-synaptic signaling (GO:0099537), negative regulation of macromolecule biosynthetic process (GO:0010558), cardiocyte differentiation (GO:0035051), regulation of epithelial to mesenchymal transition (GO:0010717), digestive tract development (GO:0048565), neuron differentiation (GO:0030182), cartilage development (GO:0051216), ganglion development (GO:0061548), epithelial tube morphogenesis (GO:0060562), embryonic digit morphogenesis (GO:0042733), regulation of macromolecule biosynthetic process (GO:0010556), sensory system development (GO:0048880), vasculature development (GO:0001944), connective tissue development (GO:0061448), glial cell differentiation (GO:0010001), telencephalon cell migration (GO:0022029), oviduct development (GO:0060066), establishment of vesicle localization (GO:0051650), kidney morphogenesis (GO:0060993), thymus development (GO:0048538), regulation of gene expression (GO:0010468), regulation of neural precursor cell proliferation (GO:2000177), regulation of cellular response to oxidative stress (GO:1900407), striated muscle cell proliferation (GO:0014855), regulation of embryonic development (GO:0045995), negative regulation of mitotic cell cycle (GO:0045930), synaptic vesicle transport (GO:0048489), positive regulation of intracellular signal transduction (GO:1902533), dorsal/ventral pattern formation (GO:0009953), mesonephric tubule development (GO:0072164), positive regulation of catalytic activity (GO:0043085), negative regulation of gene expression (GO:0010629), negative regulation of blood vessel morphogenesis (GO:2000181), heart development (GO:0007507), artery development (GO:0060840), autonomic nervous system development (GO:0048483), sympathetic nervous system development (GO:0048485), negative regulation of leukocyte differentiation (GO:1902106), leukocyte differentiation (GO:0002521), enzyme-linked receptor protein signaling pathway (GO:0007167), neuron fate commitment (GO:0048663), regulation of DNA metabolic process (GO:0051052), aromatic compound biosynthetic process (GO:0019438), regulation of cell development (GO:0060284), sensory organ development (GO:0007423), positive regulation of neural precursor cell proliferation (GO:2000179), genitalia development (GO:0048806), oogenesis (GO:0048477), regulation of neuron death (GO:1901214), negative regulation of apoptotic signaling pathway (GO:2001234), regulation of Wnt signaling pathway (GO:0030111), regulation of glial cell differentiation (GO:0045685), myeloid cell differentiation (GO:0030099), positive regulation of epithelial cell proliferation (GO:0050679), regulation of fibroblast growth factor receptor signaling pathway (GO:0040036), neurogenesis (GO:0022008), positive regulation of fibroblast growth factor receptor signaling pathway (GO:0045743), positive regulation of RNA metabolic process (GO:0051254), regulation of cartilage development (GO:0061035), trachea morphogenesis (GO:0060439), muscle tissue development (GO:0060537), regulation of cellular biosynthetic process (GO:0031326), regulation of stem cell proliferation (GO:0072091), embryonic axis specification (GO:0000578), regulation of organelle organization (GO:0033043), cellular nitrogen compound biosynthetic process (GO:0044271), positive regulation of stem cell proliferation (GO:2000648), embryonic appendage morphogenesis (GO:0035113), regulation of angiogenesis (GO:0045765), pancreas development (GO:0031016), protein localization (GO:0008104), regulation of transferase activity (GO:0051338), muscle organ development (GO:0007517), positive regulation of myoblast proliferation (GO:2000288), negative regulation of cell development (GO:0010721), cell junction organization (GO:0034330), embryo development ending in birth or egg hatching (GO:0009792), negative regulation of chondrocyte differentiation (GO:0032331), macromolecule biosynthetic process (GO:0009059), lung morphogenesis (GO:0060425), organic cyclic compound biosynthetic process (GO:1901362), digestive system development (GO:0055123), negative regulation of programmed cell death (GO:0043069), Wnt signaling pathway (GO:0016055), MAPK cascade (GO:0000165), odontogenesis (GO:0042476), sensory organ morphogenesis (GO:0090596), neuron fate determination (GO:0048664), positive regulation of osteoblast differentiation (GO:0045669), regulation of leukocyte proliferation (GO:0070663), lymphocyte differentiation (GO:0030098), brain development (GO:0007420), regulation of morphogenesis of an epithelium (GO:1905330), negative regulation of neurogenesis (GO:0050768), positive regulation of skeletal muscle tissue development (GO:0048643), nervous system development (GO:0007399), heart morphogenesis (GO:0003007), female gamete generation (GO:0007292), epidermis development (GO:0008544), heterocycle biosynthetic process (GO:0018130), vasculogenesis (GO:0001570), regulation of sister chromatid cohesion (GO:0007063), regulation of leukocyte differentiation (GO:1902105), central nervous system development (GO:0007417), ectoderm development (GO:0007398), regulation of RNA metabolic process (GO:0051252), regulation of lymphocyte activation (GO:0051249), negative regulation of angiogenesis (GO:0016525), hemopoiesis (GO:0030097), regulation of myoblast proliferation (GO:2000291), negative regulation of neuron death (GO:1901215), muscle tissue morphogenesis (GO:0060415), male genitalia development (GO:0030539), regulation of nervous system development (GO:0051960), mesenchyme development (GO:0060485), digestive tract morphogenesis (GO:0048546), epithelial cell differentiation (GO:0030855), nucleobase-containing compound biosynthetic process (GO:0034654), lung development (GO:0030324), stem cell differentiation (GO:0048863), mesenchyme morphogenesis (GO:0072132), blood vessel morphogenesis (GO:0048514), negative regulation of epithelial cell differentiation (GO:0030857), positive regulation of protein metabolic process (GO:0051247), T cell activation (GO:0042110), limb development (GO:0060173), vesicle-mediated transport (GO:0016192), negative regulation of RNA metabolic process (GO:0051253), kidney development (GO:0001822), regulation of intracellular signal transduction (GO:1902531), anterior/posterior pattern specification (GO:0009952), regulation of apoptotic process (GO:0042981), regulation of lymphocyte proliferation (GO:0050670), negative regulation of gliogenesis (GO:0014014), striated muscle tissue development (GO:0014706), mesonephros development (GO:0001823), regulation of mononuclear cell proliferation (GO:0032944), regulation of mitotic cell cycle, embryonic (GO:0009794), renal tubule morphogenesis (GO:0061333), regulation of histone H3-K4 methylation (GO:0051569), branching involved in ureteric bud morphogenesis (GO:0001658), regulation of oligodendrocyte differentiation (GO:0048713), positive regulation of RNA biosynthetic process (GO:1902680), tongue development (GO:0043586), artery morphogenesis (GO:0048844), negative regulation of myeloid leukocyte differentiation (GO:0002762), regulation of MAPK cascade (GO:0043408), positive regulation of transferase activity (GO:0051347), cardiac muscle tissue development (GO:0048738), kidney epithelium development (GO:0072073), positive regulation of histone H3-K4 methylation (GO:0051571), cranial ganglion development (GO:0061550), columnar/cuboidal epithelial cell differentiation (GO:0002065), gliogenesis (GO:0042063), neural plate development (GO:0001840), telencephalon glial cell migration (GO:0022030)
Cellular Component: cellular_component (GO:0005575), cellular anatomical entity (GO:0110165), protein-containing complex (GO:0032991), basal part of cell (GO:0045178), chromatin (GO:0000785), Z disc (GO:0030018), cell junction (GO:0030054), intracellular protein-containing complex (GO:0140535), postsynapse (GO:0098794), sarcomere (GO:0030017), extrinsic component of membrane (GO:0019898), I band (GO:0031674), transcription regulator complex (GO:0005667), membrane-enclosed lumen (GO:0031974), nucleoplasm (GO:0005654), supramolecular complex (GO:0099080), microtubule organizing center (GO:0005815), intracellular anatomical structure (GO:0005622), organelle (GO:0043226), cell projection (GO:0042995), lateral plasma membrane (GO:0016328), membrane (GO:0016020), cytosol (GO:0005829), presynapse (GO:0098793), cell periphery (GO:0071944), membrane protein complex (GO:0098796), cell leading edge (GO:0031252), apical part of cell (GO:0045177), Wnt signalosome (GO:1990909), presynaptic active zone (GO:0048786), catalytic complex (GO:1902494), cytoplasm (GO:0005737), nuclear protein-containing complex (GO:0140513), RNA polymerase II transcription repressor complex (GO:0090571), plasma membrane bounded cell projection (GO:0120025), intracellular organelle (GO:0043229), synapse (GO:0045202), cytoplasmic region (GO:0099568), plasma membrane protein complex (GO:0098797), anchoring junction (GO:0070161), membrane-bounded organelle (GO:0043227), plasma membrane (GO:0005886), postsynaptic specialization (GO:0099572), supramolecular polymer (GO:0099081), contractile fiber (GO:0043292), extrinsic component of plasma membrane (GO:0019897), euchromatin (GO:0000791), transcription repressor complex (GO:0017053), cell cortex (GO:0005938), lamellipodium (GO:0030027), RNA polymerase II transcription regulator complex (GO:0090575), non-membrane-bounded organelle (GO:0043228), centrosome (GO:0005813), postsynaptic membrane (GO:0045211), presynaptic membrane (GO:0042734), basal plasma membrane (GO:0009925), plasma membrane region (GO:0098590), organelle lumen (GO:0043233), membrane microdomain (GO:0098857), presynaptic active zone cytoplasmic component (GO:0098831), beta-catenin destruction complex (GO:0030877), apicolateral plasma membrane (GO:0016327), membrane raft (GO:0045121), Schaffer collateral - CA1 synapse (GO:0098685), cell projection membrane (GO:0031253), catenin complex (GO:0016342), intracellular non-membrane-bounded organelle (GO:0043232), postsynaptic density (GO:0014069), glutamatergic synapse (GO:0098978), beta-catenin-TCF complex (GO:1990907), neuron to neuron synapse (GO:0098984), supramolecular fiber (GO:0099512), myofibril (GO:0030016), plasma membrane raft (GO:0044853), intracellular organelle lumen (GO:0070013), actin-based cell projection (GO:0098858), synaptic membrane (GO:0097060), intracellular membrane-bounded organelle (GO:0043231), postsynaptic specialization, intracellular component (GO:0099091), basolateral plasma membrane (GO:0016323), cell-cell junction (GO:0005911), cell cortex region (GO:0099738), apical junction complex (GO:0043296), asymmetric synapse (GO:0032279), cytoskeleton (GO:0005856), cell-cell contact zone (GO:0044291), chromosome (GO:0005694), microvillus (GO:0005902), caveola (GO:0005901), postsynaptic density, intracellular component (GO:0099092), nucleus (GO:0005634), nuclear lumen (GO:0031981), tight junction (GO:0070160), adherens junction (GO:0005912), microvillus membrane (GO:0031528), bicellular tight junction (GO:0005923), microtubule cytoskeleton (GO:0015630), intercalated disc (GO:0014704)
Generated by BioReason
Exported on March 22, 2026 at 01:25 AM
Organism: Mus musculus
Sequence:
MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEALGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL
I begin with the InterPro architecture. The sequence is assigned to IPR013284 (Beta-catenin family, residues 3–781), establishing membership in the beta-catenin/plakoglobin/plastin lineage that forms armadillo-repeat scaffolds. Nested within this, IPR011989 (Armadillo-like helical homologous superfamily, residues 123–666) and IPR016024 (Armadillo-type fold homologous superfamily, residues 135–664) define a central alpha-helical solenoid composed of tandem armadillo repeats. The repeat core is explicitly captured by IPR000225 (Armadillo repeat, residues 141–664). This ordered array of armadillo repeats creates an extended, positively charged groove that binds diverse partners—classically cadherin cytoplasmic tails and catenins—through multivalent, shape-complementary interactions. The N-terminal family signature and C-terminal tail together tune affinity and selectivity, causing robust protein–protein interaction capacity rather than catalysis.
This armadillo-repeat scaffold dictates molecular function as a binding hub. The repeat architecture generates high-affinity surfaces for assembling multiprotein complexes, supporting GO:0005515 protein binding as the primary molecular function. In beta-catenin family proteins, the same scaffold often coordinates junctional assemblies and transcriptional regulators; here, the absence of enzymatic motifs and the dominance of repeat-mediated interfaces argue that binding and scaffolding—not enzymatic activity—are the core functions.
From function to process, the armadillo scaffold couples two major pathways. First, it nucleates adherens junctions by docking to cadherin cytoplasmic domains and recruiting other catenins, driving cell–cell adhesion and junction maturation—central to adherens junction assembly and maintenance. Second, members of this family can shuttle to nuclear complexes and modulate transcriptional programs; although this isoform’s detailed roles are not fully resolved, the capacity of the armadillo core to assemble regulatory complexes rationalizes participation in signal-responsive gene control that coordinates with junctional signaling.
The cellular context follows directly from the scaffold’s role. The absence of transmembrane segments and the presence of extensive interaction surfaces predict a soluble cytoplasmic protein that concentrates at cell–cell junctions. This matches a junctional adaptor that operates at adherens junctions while remaining cytoplasmic when not bound, aligning with the observed cytoplasm/cytostroma and junctional enrichment.
Mechanistically, I hypothesize that this armadillo-repeat scaffold forms a high-avidity platform at adherens junctions, binding cadherin tails and recruiting alpha-catenin/plakophilins to stabilize the adhesion complex. Dynamic exchange with cytoplasmic pools likely allows regulated assembly with transcriptional co-regulators under signaling cues. Likely partners include classical cadherins and the catenin network at junctions, with transient associations to transcriptional regulators that tune adhesion-coupled gene expression.
A cytoplasmic armadillo-repeat scaffold that concentrates at cell–cell junctions to organize multiprotein assemblies. By using a tandem helical repeat core, it binds cytoplasmic adhesion receptors and junctional adaptors to stabilize adherens junction architecture while dynamically exchanging with soluble pools. This binding-driven mechanism positions it to coordinate adhesion with signal-responsive gene regulation, operating predominantly at junctions within the cytoplasmic compartment.
Not yet known.
IPR013284, family) — residues 3-781IPR011989, homologous_superfamily) — residues 123-666IPR016024, homologous_superfamily) — residues 135-664IPR000225, repeat) — residues 141-664Molecular Function: molecular_function (GO:0003674), molecular function regulator activity (GO:0098772), binding (GO:0005488), transcription regulator activity (GO:0140110), molecular function activator activity (GO:0140677), heterocyclic compound binding (GO:1901363), chromatin binding (GO:0003682), organic cyclic compound binding (GO:0097159), transcription coregulator activity (GO:0003712), protein binding (GO:0005515), transcription factor binding (GO:0008134), nucleic acid binding (GO:0003676), alpha-catenin binding (GO:0045294), protein domain specific binding (GO:0019904), cell adhesion molecule binding (GO:0050839), enzyme binding (GO:0019899), transcription coactivator activity (GO:0003713), cadherin binding (GO:0045296), DNA-binding transcription factor binding (GO:0140297), kinase binding (GO:0019900), transcription coregulator binding (GO:0001221), disordered domain specific binding (GO:0097718), histone methyltransferase binding (GO:1990226), phosphatase binding (GO:0019902), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), protein kinase binding (GO:0019901), protein phosphatase binding (GO:0019903), nuclear receptor binding (GO:0016922)
Biological Process: biological_process (GO:0008150), biological regulation (GO:0065007), response to stimulus (GO:0050896), reproductive process (GO:0022414), regulation of biological process (GO:0050789), reproduction (GO:0000003), multicellular organismal process (GO:0032501), metabolic process (GO:0008152), homeostatic process (GO:0042592), immune system process (GO:0002376), localization (GO:0051179), signaling (GO:0023052), growth (GO:0040007), negative regulation of biological process (GO:0048519), positive regulation of biological process (GO:0048518), developmental process (GO:0032502), cellular process (GO:0009987), anatomical structure development (GO:0048856), negative regulation of signaling (GO:0023057), developmental process involved in reproduction (GO:0003006), multicellular organismal-level homeostasis (GO:0048871), anatomical structure formation involved in morphogenesis (GO:0048646), regulation of biological quality (GO:0065008), regulation of response to stimulus (GO:0048583), developmental maturation (GO:0021700), negative regulation of cellular process (GO:0048523), biosynthetic process (GO:0009058), establishment of localization (GO:0051234), macromolecule localization (GO:0033036), developmental growth (GO:0048589), leukocyte activation (GO:0045321), cell population proliferation (GO:0008283), nitrogen compound metabolic process (GO:0006807), negative regulation of multicellular organismal process (GO:0051241), cell death (GO:0008219), regulation of signaling (GO:0023051), negative regulation of developmental process (GO:0051093), signal transduction (GO:0007165), cell activation (GO:0001775), tissue remodeling (GO:0048771), immune system development (GO:0002520), developmental induction (GO:0031128), morphogenesis of a branching structure (GO:0001763), positive regulation of developmental process (GO:0051094), negative regulation of response to stimulus (GO:0048585), sexual reproduction (GO:0019953), cellular localization (GO:0051641), positive regulation of multicellular organismal process (GO:0051240), molting cycle (GO:0042303), pattern specification process (GO:0007389), cellular component organization or biogenesis (GO:0071840), regulation of multicellular organismal process (GO:0051239), negative regulation of metabolic process (GO:0009892), positive regulation of reproductive process (GO:2000243), cellular process involved in reproduction in multicellular organism (GO:0022412), regulation of cellular process (GO:0050794), cellular response to stimulus (GO:0051716), cellular developmental process (GO:0048869), organ growth (GO:0035265), regulation of metabolic process (GO:0019222), positive regulation of response to stimulus (GO:0048584), molting cycle process (GO:0022404), ossification (GO:0001503), regulation of molecular function (GO:0065009), cell communication (GO:0007154), positive regulation of cellular process (GO:0048522), anatomical structure morphogenesis (GO:0009653), cell motility (GO:0048870), regulation of reproductive process (GO:2000241), multicellular organism reproduction (GO:0032504), cell-cell signaling (GO:0007267), regulation of developmental process (GO:0050793), negative regulation of immune system process (GO:0002683), response to endogenous stimulus (GO:0009719), organelle localization (GO:0051640), positive regulation of signaling (GO:0023056), multicellular organism development (GO:0007275), cell adhesion (GO:0007155), regulation of immune system process (GO:0002682), organic substance metabolic process (GO:0071704), cellular metabolic process (GO:0044237), positive regulation of metabolic process (GO:0009893), multicellular organismal reproductive process (GO:0048609), primary metabolic process (GO:0044238), neural precursor cell proliferation (GO:0061351), hypothalamus development (GO:0021854), tube formation (GO:0035148), regulation of response to stress (GO:0080134), stem cell proliferation (GO:0072089), animal organ development (GO:0048513), regulation of hemopoiesis (GO:1903706), negative regulation of vasculature development (GO:1901343), negative regulation of hemopoiesis (GO:1903707), synaptic signaling (GO:0099536), regulation of anatomical structure morphogenesis (GO:0022603), negative regulation of cell cycle (GO:0045786), nephron development (GO:0072006), midbrain development (GO:0030901), positive regulation of nitrogen compound metabolic process (GO:0051173), positive regulation of cell differentiation (GO:0045597), appendage development (GO:0048736), germ cell development (GO:0007281), organic substance biosynthetic process (GO:1901576), animal organ formation (GO:0048645), cell-cell signaling by wnt (GO:0198738), positive regulation of muscle tissue development (GO:1901863), regulation of cellular response to stress (GO:0080135), hindbrain development (GO:0030902), cellular biosynthetic process (GO:0044249), macromolecule metabolic process (GO:0043170), positive regulation of biosynthetic process (GO:0009891), muscle structure development (GO:0061061), regulation of cell population proliferation (GO:0042127), regulation of cell death (GO:0010941), regionalization (GO:0003002), negative regulation of cell differentiation (GO:0045596), transport (GO:0006810), regulation of cellular metabolic process (GO:0031323), positive regulation of cell communication (GO:0010647), hair cycle process (GO:0022405), regulation of primary metabolic process (GO:0080090), ectodermal placode development (GO:0071696), negative regulation of signal transduction (GO:0009968), negative regulation of cell death (GO:0060548), cell differentiation (GO:0030154), negative regulation of nervous system development (GO:0051961), system development (GO:0048731), myoblast proliferation (GO:0051450), ectodermal placode formation (GO:0060788), regulation of leukocyte activation (GO:0002694), regulation of binding (GO:0051098), heart growth (GO:0060419), tube development (GO:0035295), cell morphogenesis (GO:0000902), regulation of cell cycle (GO:0051726), animal organ morphogenesis (GO:0009887), cell maturation (GO:0048469), regulation of myelination (GO:0031641), apoptotic signaling pathway (GO:0097190), pallium development (GO:0021543), cell surface receptor signaling pathway (GO:0007166), sex differentiation (GO:0007548), regulation of cellular component organization (GO:0051128), cranial skeletal system development (GO:1904888), cell-substrate adhesion (GO:0031589), positive regulation of cell population proliferation (GO:0008284), tube morphogenesis (GO:0035239), negative regulation of cell communication (GO:0010648), axis specification (GO:0009798), cell-cell adhesion (GO:0098609), hair follicle morphogenesis (GO:0031069), morphogenesis of a branching epithelium (GO:0061138), cardiac chamber development (GO:0003205), negative regulation of cellular metabolic process (GO:0031324), cell fate commitment (GO:0045165), cell fate determination (GO:0001709), embryonic morphogenesis (GO:0048598), lens development in camera-type eye (GO:0002088), tissue homeostasis (GO:0001894), hematopoietic or lymphoid organ development (GO:0048534), negative regulation of cartilage development (GO:0061037), hair cycle (GO:0042633), regulation of signal transduction (GO:0009966), foregut morphogenesis (GO:0007440), regulation of macromolecule metabolic process (GO:0060255), reproductive structure development (GO:0048608), cellular aromatic compound metabolic process (GO:0006725), vesicle localization (GO:0051648), positive regulation of epithelial to mesenchymal transition (GO:0010718), regulation of cellular component biogenesis (GO:0044087), establishment of organelle localization (GO:0051656), negative regulation of macromolecule metabolic process (GO:0010605), regulation of morphogenesis of a branching structure (GO:0060688), muscle cell proliferation (GO:0033002), embryo development (GO:0009790), regulation of cell cycle process (GO:0010564), regulation of cell activation (GO:0050865), nerve development (GO:0021675), regulation of catalytic activity (GO:0050790), negative regulation of nitrogen compound metabolic process (GO:0051172), cerebral cortex development (GO:0021987), positive regulation of molecular function (GO:0044093), positive regulation of macromolecule metabolic process (GO:0010604), blood vessel development (GO:0001568), telencephalon development (GO:0021537), heterocycle metabolic process (GO:0046483), establishment of localization in cell (GO:0051649), appendage morphogenesis (GO:0035107), cellular nitrogen compound metabolic process (GO:0034641), angiogenesis (GO:0001525), formation of primary germ layer (GO:0001704), regulation of multicellular organismal development (GO:2000026), diencephalon development (GO:0021536), positive regulation of cellular metabolic process (GO:0031325), bone remodeling (GO:0046849), regulation of DNA-binding transcription factor activity (GO:0051090), epithelial cell proliferation (GO:0050673), cellular macromolecule localization (GO:0070727), negative regulation of biosynthetic process (GO:0009890), male sex differentiation (GO:0046661), regulation of muscle tissue development (GO:1901861), regulation of cellular response to growth factor stimulus (GO:0090287), mesenchymal cell proliferation (GO:0010463), tissue morphogenesis (GO:0048729), programmed cell death (GO:0012501), cell development (GO:0048468), cardiac muscle tissue growth (GO:0055017), response to growth factor (GO:0070848), cell fate specification (GO:0001708), cellular response to endogenous stimulus (GO:0071495), regulation of synapse structure or activity (GO:0050803), lymphocyte activation (GO:0046649), anatomical structure maturation (GO:0071695), organic cyclic compound metabolic process (GO:1901360), genitalia morphogenesis (GO:0035112), lens morphogenesis in camera-type eye (GO:0002089), forebrain development (GO:0030900), regulation of nitrogen compound metabolic process (GO:0051171), hair follicle development (GO:0001942), nephron morphogenesis (GO:0072028), regulation of cell differentiation (GO:0045595), cellular component organization (GO:0016043), oocyte differentiation (GO:0009994), positive regulation of nervous system development (GO:0051962), cell migration (GO:0016477), positive regulation of animal organ morphogenesis (GO:0110110), positive regulation of signal transduction (GO:0009967), gamete generation (GO:0007276), intracellular signal transduction (GO:0035556), osteoblast differentiation (GO:0001649), cell surface receptor signaling pathway involved in cell-cell signaling (GO:1905114), positive regulation of cellular component organization (GO:0051130), embryonic pattern specification (GO:0009880), anatomical structure homeostasis (GO:0060249), tissue development (GO:0009888), nucleobase-containing compound metabolic process (GO:0006139), head development (GO:0060322), regulation of cell communication (GO:0010646), regulation of biosynthetic process (GO:0009889), cardiac chamber morphogenesis (GO:0003206), ectodermal placode morphogenesis (GO:0071697), positive regulation of morphogenesis of an epithelium (GO:1905332), endoderm development (GO:0007492), nephron epithelium development (GO:0072009), skeletal system morphogenesis (GO:0048705), regulation of synapse organization (GO:0050807), regulation of protein metabolic process (GO:0051246), cranial nerve development (GO:0021545), positive regulation of mesenchymal cell proliferation (GO:0002053), regulation of epithelial cell proliferation (GO:0050678), anterior/posterior axis specification (GO:0009948), cell-matrix adhesion (GO:0007160), synaptic vesicle cycle (GO:0099504), regulation of oxidative stress-induced cell death (GO:1903201), muscle cell differentiation (GO:0042692), neuron migration (GO:0001764), skeletal system development (GO:0001501), embryonic heart tube development (GO:0035050), cell surface receptor signaling pathway involved in heart development (GO:0061311), oocyte development (GO:0048599), circulatory system development (GO:0072359), regulation of response to oxidative stress (GO:1902882), forebrain cell migration (GO:0021885), cerebral cortex cell migration (GO:0021795), regulation of osteoblast differentiation (GO:0045667), regulation of cell proliferation involved in heart morphogenesis (GO:2000136), trachea development (GO:0060438), regulation of vasculature development (GO:1901342), positive regulation of epithelial cell differentiation (GO:0030858), response to fibroblast growth factor (GO:0071774), lung cell differentiation (GO:0060479), limb morphogenesis (GO:0035108), cell fate commitment involved in formation of primary germ layer (GO:0060795), epithelial tube formation (GO:0072175), positive regulation of macromolecule biosynthetic process (GO:0010557), chondrocyte differentiation (GO:0002062), positive regulation of histone methylation (GO:0031062), apoptotic process (GO:0006915), regulation of DNA binding (GO:0051101), I-kappaB kinase/NF-kappaB signaling (GO:0007249), regulation of nucleobase-containing compound metabolic process (GO:0019219), dorsal/ventral axis specification (GO:0009950), epithelium development (GO:0060429), positive regulation of organelle organization (GO:0010638), positive regulation of cellular biosynthetic process (GO:0031328), cellular response to growth factor stimulus (GO:0071363), regulation of animal organ formation (GO:0003156), regulation of epithelial cell differentiation (GO:0030856), respiratory system development (GO:0060541), regulation of mitotic cell cycle (GO:0007346), regulation of programmed cell death (GO:0043067), nephron epithelium morphogenesis (GO:0072088), gland development (GO:0048732), gastrulation (GO:0007369), cardiac ventricle development (GO:0003231), bone resorption (GO:0045453), morphogenesis of an epithelium (GO:0002009), positive regulation of neurogenesis (GO:0050769), skin development (GO:0043588), morphogenesis of embryonic epithelium (GO:0016331), coronary vasculature development (GO:0060976), branching morphogenesis of an epithelial tube (GO:0048754), cardiac ventricle morphogenesis (GO:0003208), regulation of myeloid cell differentiation (GO:0045637), embryonic organ development (GO:0048568), cell morphogenesis involved in differentiation (GO:0000904), renal tubule development (GO:0061326), regulation of skeletal muscle tissue development (GO:0048641), limbic system development (GO:0021761), negative regulation of myeloid cell differentiation (GO:0045638), nucleic acid metabolic process (GO:0090304), proximal/distal pattern formation (GO:0009954), branching involved in blood vessel morphogenesis (GO:0001569), regulation of chondrocyte differentiation (GO:0032330), negative regulation of cellular biosynthetic process (GO:0031327), negative regulation of Wnt signaling pathway (GO:0030178), regulation of animal organ morphogenesis (GO:2000027), negative regulation of nucleobase-containing compound metabolic process (GO:0045934), gene expression (GO:0010467), positive regulation of DNA-binding transcription factor activity (GO:0051091), renal system development (GO:0072001), glial cell fate commitment (GO:0021781), cardiac muscle cell proliferation (GO:0060038), neuroblast proliferation (GO:0007405), reproductive system development (GO:0061458), endoderm formation (GO:0001706), positive regulation of DNA metabolic process (GO:0051054), embryonic organ morphogenesis (GO:0048562), synaptic vesicle localization (GO:0097479), regulation of cell junction assembly (GO:1901888), positive regulation of cell development (GO:0010720), urogenital system development (GO:0001655), positive regulation of gene expression (GO:0010628), muscle organ morphogenesis (GO:0048644), regulation of mesenchymal cell proliferation (GO:0010464), negative regulation of oxidative stress-induced cell death (GO:1903202), regulation of apoptotic signaling pathway (GO:2001233), endodermal cell differentiation (GO:0035987), regulation of histone methylation (GO:0031060), positive regulation of binding (GO:0051099), positive regulation of nucleobase-containing compound metabolic process (GO:0045935), respiratory tube development (GO:0030323), prostate gland development (GO:0030850), glial cell migration (GO:0008347), trans-synaptic signaling (GO:0099537), negative regulation of macromolecule biosynthetic process (GO:0010558), cardiocyte differentiation (GO:0035051), regulation of epithelial to mesenchymal transition (GO:0010717), digestive tract development (GO:0048565), neuron differentiation (GO:0030182), cartilage development (GO:0051216), ganglion development (GO:0061548), epithelial tube morphogenesis (GO:0060562), embryonic digit morphogenesis (GO:0042733), regulation of macromolecule biosynthetic process (GO:0010556), sensory system development (GO:0048880), vasculature development (GO:0001944), connective tissue development (GO:0061448), glial cell differentiation (GO:0010001), telencephalon cell migration (GO:0022029), oviduct development (GO:0060066), establishment of vesicle localization (GO:0051650), kidney morphogenesis (GO:0060993), thymus development (GO:0048538), regulation of gene expression (GO:0010468), regulation of neural precursor cell proliferation (GO:2000177), regulation of cellular response to oxidative stress (GO:1900407), striated muscle cell proliferation (GO:0014855), regulation of embryonic development (GO:0045995), negative regulation of mitotic cell cycle (GO:0045930), synaptic vesicle transport (GO:0048489), positive regulation of intracellular signal transduction (GO:1902533), dorsal/ventral pattern formation (GO:0009953), mesonephric tubule development (GO:0072164), positive regulation of catalytic activity (GO:0043085), negative regulation of gene expression (GO:0010629), negative regulation of blood vessel morphogenesis (GO:2000181), heart development (GO:0007507), artery development (GO:0060840), autonomic nervous system development (GO:0048483), sympathetic nervous system development (GO:0048485), negative regulation of leukocyte differentiation (GO:1902106), leukocyte differentiation (GO:0002521), enzyme-linked receptor protein signaling pathway (GO:0007167), neuron fate commitment (GO:0048663), regulation of DNA metabolic process (GO:0051052), aromatic compound biosynthetic process (GO:0019438), regulation of cell development (GO:0060284), sensory organ development (GO:0007423), positive regulation of neural precursor cell proliferation (GO:2000179), genitalia development (GO:0048806), oogenesis (GO:0048477), regulation of neuron death (GO:1901214), negative regulation of apoptotic signaling pathway (GO:2001234), regulation of Wnt signaling pathway (GO:0030111), regulation of glial cell differentiation (GO:0045685), myeloid cell differentiation (GO:0030099), positive regulation of epithelial cell proliferation (GO:0050679), regulation of fibroblast growth factor receptor signaling pathway (GO:0040036), neurogenesis (GO:0022008), positive regulation of fibroblast growth factor receptor signaling pathway (GO:0045743), positive regulation of RNA metabolic process (GO:0051254), regulation of cartilage development (GO:0061035), trachea morphogenesis (GO:0060439), muscle tissue development (GO:0060537), regulation of cellular biosynthetic process (GO:0031326), regulation of stem cell proliferation (GO:0072091), embryonic axis specification (GO:0000578), regulation of organelle organization (GO:0033043), cellular nitrogen compound biosynthetic process (GO:0044271), positive regulation of stem cell proliferation (GO:2000648), embryonic appendage morphogenesis (GO:0035113), regulation of angiogenesis (GO:0045765), pancreas development (GO:0031016), protein localization (GO:0008104), regulation of transferase activity (GO:0051338), muscle organ development (GO:0007517), positive regulation of myoblast proliferation (GO:2000288), negative regulation of cell development (GO:0010721), cell junction organization (GO:0034330), embryo development ending in birth or egg hatching (GO:0009792), negative regulation of chondrocyte differentiation (GO:0032331), macromolecule biosynthetic process (GO:0009059), lung morphogenesis (GO:0060425), organic cyclic compound biosynthetic process (GO:1901362), digestive system development (GO:0055123), negative regulation of programmed cell death (GO:0043069), Wnt signaling pathway (GO:0016055), MAPK cascade (GO:0000165), odontogenesis (GO:0042476), sensory organ morphogenesis (GO:0090596), neuron fate determination (GO:0048664), positive regulation of osteoblast differentiation (GO:0045669), regulation of leukocyte proliferation (GO:0070663), lymphocyte differentiation (GO:0030098), brain development (GO:0007420), regulation of morphogenesis of an epithelium (GO:1905330), negative regulation of neurogenesis (GO:0050768), positive regulation of skeletal muscle tissue development (GO:0048643), nervous system development (GO:0007399), heart morphogenesis (GO:0003007), female gamete generation (GO:0007292), epidermis development (GO:0008544), heterocycle biosynthetic process (GO:0018130), vasculogenesis (GO:0001570), regulation of sister chromatid cohesion (GO:0007063), regulation of leukocyte differentiation (GO:1902105), central nervous system development (GO:0007417), ectoderm development (GO:0007398), regulation of RNA metabolic process (GO:0051252), regulation of lymphocyte activation (GO:0051249), negative regulation of angiogenesis (GO:0016525), hemopoiesis (GO:0030097), regulation of myoblast proliferation (GO:2000291), negative regulation of neuron death (GO:1901215), muscle tissue morphogenesis (GO:0060415), male genitalia development (GO:0030539), regulation of nervous system development (GO:0051960), mesenchyme development (GO:0060485), digestive tract morphogenesis (GO:0048546), epithelial cell differentiation (GO:0030855), nucleobase-containing compound biosynthetic process (GO:0034654), lung development (GO:0030324), stem cell differentiation (GO:0048863), mesenchyme morphogenesis (GO:0072132), blood vessel morphogenesis (GO:0048514), negative regulation of epithelial cell differentiation (GO:0030857), positive regulation of protein metabolic process (GO:0051247), T cell activation (GO:0042110), limb development (GO:0060173), vesicle-mediated transport (GO:0016192), negative regulation of RNA metabolic process (GO:0051253), kidney development (GO:0001822), regulation of intracellular signal transduction (GO:1902531), anterior/posterior pattern specification (GO:0009952), regulation of apoptotic process (GO:0042981), regulation of lymphocyte proliferation (GO:0050670), negative regulation of gliogenesis (GO:0014014), striated muscle tissue development (GO:0014706), mesonephros development (GO:0001823), regulation of mononuclear cell proliferation (GO:0032944), regulation of mitotic cell cycle, embryonic (GO:0009794), renal tubule morphogenesis (GO:0061333), regulation of histone H3-K4 methylation (GO:0051569), branching involved in ureteric bud morphogenesis (GO:0001658), regulation of oligodendrocyte differentiation (GO:0048713), positive regulation of RNA biosynthetic process (GO:1902680), tongue development (GO:0043586), artery morphogenesis (GO:0048844), negative regulation of myeloid leukocyte differentiation (GO:0002762), regulation of MAPK cascade (GO:0043408), positive regulation of transferase activity (GO:0051347), cardiac muscle tissue development (GO:0048738), kidney epithelium development (GO:0072073), positive regulation of histone H3-K4 methylation (GO:0051571), cranial ganglion development (GO:0061550), columnar/cuboidal epithelial cell differentiation (GO:0002065), gliogenesis (GO:0042063), neural plate development (GO:0001840), telencephalon glial cell migration (GO:0022030)
Cellular Component: cellular_component (GO:0005575), cellular anatomical entity (GO:0110165), protein-containing complex (GO:0032991), basal part of cell (GO:0045178), chromatin (GO:0000785), Z disc (GO:0030018), cell junction (GO:0030054), intracellular protein-containing complex (GO:0140535), postsynapse (GO:0098794), sarcomere (GO:0030017), extrinsic component of membrane (GO:0019898), I band (GO:0031674), transcription regulator complex (GO:0005667), membrane-enclosed lumen (GO:0031974), nucleoplasm (GO:0005654), supramolecular complex (GO:0099080), microtubule organizing center (GO:0005815), intracellular anatomical structure (GO:0005622), organelle (GO:0043226), cell projection (GO:0042995), lateral plasma membrane (GO:0016328), membrane (GO:0016020), cytosol (GO:0005829), presynapse (GO:0098793), cell periphery (GO:0071944), membrane protein complex (GO:0098796), cell leading edge (GO:0031252), apical part of cell (GO:0045177), Wnt signalosome (GO:1990909), presynaptic active zone (GO:0048786), catalytic complex (GO:1902494), cytoplasm (GO:0005737), nuclear protein-containing complex (GO:0140513), RNA polymerase II transcription repressor complex (GO:0090571), plasma membrane bounded cell projection (GO:0120025), intracellular organelle (GO:0043229), synapse (GO:0045202), cytoplasmic region (GO:0099568), plasma membrane protein complex (GO:0098797), anchoring junction (GO:0070161), membrane-bounded organelle (GO:0043227), plasma membrane (GO:0005886), postsynaptic specialization (GO:0099572), supramolecular polymer (GO:0099081), contractile fiber (GO:0043292), extrinsic component of plasma membrane (GO:0019897), euchromatin (GO:0000791), transcription repressor complex (GO:0017053), cell cortex (GO:0005938), lamellipodium (GO:0030027), RNA polymerase II transcription regulator complex (GO:0090575), non-membrane-bounded organelle (GO:0043228), centrosome (GO:0005813), postsynaptic membrane (GO:0045211), presynaptic membrane (GO:0042734), basal plasma membrane (GO:0009925), plasma membrane region (GO:0098590), organelle lumen (GO:0043233), membrane microdomain (GO:0098857), presynaptic active zone cytoplasmic component (GO:0098831), beta-catenin destruction complex (GO:0030877), apicolateral plasma membrane (GO:0016327), membrane raft (GO:0045121), Schaffer collateral - CA1 synapse (GO:0098685), cell projection membrane (GO:0031253), catenin complex (GO:0016342), intracellular non-membrane-bounded organelle (GO:0043232), postsynaptic density (GO:0014069), glutamatergic synapse (GO:0098978), beta-catenin-TCF complex (GO:1990907), neuron to neuron synapse (GO:0098984), supramolecular fiber (GO:0099512), myofibril (GO:0030016), plasma membrane raft (GO:0044853), intracellular organelle lumen (GO:0070013), actin-based cell projection (GO:0098858), synaptic membrane (GO:0097060), intracellular membrane-bounded organelle (GO:0043231), postsynaptic specialization, intracellular component (GO:0099091), basolateral plasma membrane (GO:0016323), cell-cell junction (GO:0005911), cell cortex region (GO:0099738), apical junction complex (GO:0043296), asymmetric synapse (GO:0032279), cytoskeleton (GO:0005856), cell-cell contact zone (GO:0044291), chromosome (GO:0005694), microvillus (GO:0005902), caveola (GO:0005901), postsynaptic density, intracellular component (GO:0099092), nucleus (GO:0005634), nuclear lumen (GO:0031981), tight junction (GO:0070160), adherens junction (GO:0005912), microvillus membrane (GO:0031528), bicellular tight junction (GO:0005923), microtubule cytoskeleton (GO:0015630), intercalated disc (GO:0014704)
Generated by BioReason
Issue: Validation failure due to massive mismatch between review and current GOA file:
- 553 missing annotations from GOA
- 24 annotations not in GOA
- 190 new references needed
Root Cause: The Ctnnb1 GOA file has expanded dramatically from ~206 annotations to 816 lines since the original review. This represents one of the most significant updates in the dataset.
Action Taken: Used the GOA validator to seed all 553 missing annotations, which added 190 new references. However, this created a massive file (8099 lines) that may need manual curation.
Outstanding Issues:
1. Some annotations like GO:0019221 (cytokine-mediated signaling pathway) with PMID:19619491 appear to have been retired from GOA
2. The file now contains a mix of carefully reviewed annotations and newly seeded PENDING annotations
3. The validation is timing out due to the file size
Recommendation: This gene requires special attention in a future curation cycle to:
1. Review the 553 newly seeded annotations
2. Identify and mark retired annotations
3. Resolve evidence type mismatches
4. Streamline the review for better maintainability
Note: Beta-catenin is a highly studied protein involved in multiple pathways (Wnt signaling, cell adhesion, transcriptional regulation), which explains the extensive annotation expansion.
Source: Ctnnb1-deep-research-bioreason-rl.md
The BioReason functional summary captures the structural basis well but is incomplete on function:
A cytoplasmic armadillo-repeat scaffold that concentrates at cell-cell junctions to organize multiprotein assemblies. By using a tandem helical repeat core, it binds cytoplasmic adhesion receptors and junctional adaptors to stabilize adherens junction architecture while dynamically exchanging with soluble pools. This binding-driven mechanism positions it to coordinate adhesion with signal-responsive gene regulation, operating predominantly at junctions within the cytoplasmic compartment.
The adhesion role is correctly identified -- the curated review confirms beta-catenin "links cadherins to the actin cytoskeleton at adherens junctions to mediate cell-cell adhesion" (GO:0045296, cadherin binding; GO:0098609, cell-cell adhesion; GO:0005912, adherens junction). However, the summary significantly underweights the Wnt signaling / transcriptional co-activator function.
The curated review describes Ctnnb1 as having "dual roles in cell adhesion and Wnt signaling" and devotes equal emphasis to its nuclear function: "stabilized beta-catenin translocates to the nucleus where it acts as a transcriptional co-activator with TCF/LEF transcription factors." The BioReason summary only vaguely alludes to this as "signal-responsive gene regulation" without naming Wnt signaling, TCF/LEF, or the nuclear translocation. This is a major omission since the Wnt/beta-catenin transcriptional axis is arguably as important as the adhesion role.
The thinking trace hedges with "although this isoform's detailed roles are not fully resolved," which is incorrect -- Ctnnb1's role in Wnt signaling is extremely well-characterized in mouse. This appears to be a limitation of relying purely on domain architecture without literature context.
Comparison with interpro2go:
There are no GO_REF:0000002 annotations for Ctnnb1 in the curated review. BioReason's GO term predictions do include many Wnt-related terms (GO:0016055 Wnt signaling pathway, GO:0198738 cell-cell signaling by wnt) and transcriptional terms, suggesting the GO prediction module captures what the functional summary misses. This disconnect between the narrative summary and the predicted GO terms is notable -- the summary is more conservative than the GO predictions.
The trace correctly identifies the armadillo-repeat scaffold and cadherin-binding groove. However, it explicitly hedges on the transcriptional role ("this isoform's detailed roles are not fully resolved"), which is a significant error of caution -- Ctnnb1/beta-catenin's transcriptional co-activator function is one of the most studied signaling mechanisms in developmental biology.
id: Q02248
gene_symbol: Ctnnb1
taxon:
id: NCBITaxon:10090
label: Mus musculus
description: Beta-catenin is a multifunctional protein with dual roles in cell
adhesion and Wnt signaling. At adherens junctions, it links E-cadherin to
alpha-catenin and the actin cytoskeleton, maintaining epithelial integrity. In
the canonical Wnt pathway, stabilized beta-catenin translocates to the nucleus
where it acts as a transcriptional co-activator with TCF/LEF transcription
factors, driving expression of genes controlling cell proliferation,
differentiation, and fate specification. The protein contains 12 Armadillo
repeats that form a versatile protein interaction interface, an N-terminal
regulatory domain with phosphorylation sites controlling stability, and a
C-terminal transactivation domain required for gene regulation. Essential for
embryonic development, beta-catenin is required for gastrulation, axis
formation, and organogenesis. Loss-of-function mutations cause
neurodevelopmental disorders while gain-of-function mutations drive
oncogenesis.
existing_annotations:
- term:
id: GO:0001525
label: angiogenesis
evidence_type: IMP
original_reference_id: PMID:28463231
review:
summary: Beta-catenin knockout mice show disrupted vasculature
development, particularly in CNS angiogenesis. The referenced
PMID:28463231 demonstrates that disruption of Wnt/beta-catenin signaling
affects pulmonary mesenchymal progenitor cells and microvascular
dysfunction. Beta-catenin's role in angiogenesis is mediated through
canonical Wnt signaling which regulates endothelial cell differentiation
and vessel formation.
action: KEEP_AS_NON_CORE
reason: While beta-catenin does participate in angiogenesis through Wnt
signaling in endothelial cells, this represents a downstream
developmental consequence of its core signaling function rather than a
direct molecular role. The protein's primary functions are cell adhesion
and transcriptional co-activation; angiogenesis is a tissue-specific
developmental process that utilizes these core functions.
supported_by:
- reference_id: PMID:28463231
supporting_text: May 2. Disruption of lineage specification in adult
pulmonary mesenchymal progenitor cells promotes microvascular
dysfunction.
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- term:
id: GO:0001708
label: cell fate specification
evidence_type: IMP
original_reference_id: PMID:28463231
review:
summary: Beta-catenin is essential for cell fate specification through its
role as a transcriptional co-activator in canonical Wnt signaling. The
protein partners with TCF/LEF transcription factors to drive expression
of genes controlling cell differentiation and fate determination during
development.
action: ACCEPT
reason: Cell fate specification is a well-established core function of
beta-catenin through Wnt signaling. This represents one of its primary
biological roles, directly mediated by its transcriptional co-activator
function with TCF/LEF. Multiple studies confirm beta-catenin's essential
role in determining cell fates across various tissues.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes ... Beta-catenin also
serves as a central effector in the canonical Wnt signaling pathway,
which controls cell proliferation, differentiation, and fate during
development
- reference_id: PMID:28463231
supporting_text: May 2. Disruption of lineage specification in adult
pulmonary mesenchymal progenitor cells promotes microvascular
dysfunction.
- term:
id: GO:0019221
label: cytokine-mediated signaling pathway
evidence_type: IMP
original_reference_id: PMID:19619491
review:
summary: The referenced study shows reciprocal requirements between
EDA/EDAR/NF-kappaB and Wnt/beta-catenin signaling in hair follicle
induction. While beta-catenin interacts with cytokine pathways, this
represents crosstalk between signaling systems rather than beta-catenin
directly mediating cytokine signals.
action: REMOVE
reason: This annotation is too broad and misleading. Beta-catenin is not a
direct mediator of cytokine signaling pathways. The cited paper
describes crosstalk between Wnt/beta-catenin and NF-kappaB pathways in a
specific developmental context, but this doesn't make beta-catenin a
general cytokine signaling mediator. The core function is Wnt signaling,
not cytokine signaling.
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway
retired: true
- term:
id: GO:0002064
label: epithelial cell development
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: The cited study on lens development shows beta-catenin is
required for proper epithelial morphogenesis and cell behavior. Loss of
beta-catenin disrupts coordinated epithelial cell behavior during lens
morphogenesis. Beta-catenin functions both in cell adhesion (structural)
and Wnt signaling (regulatory) capacities in epithelial development.
action: ACCEPT
reason: Epithelial cell development directly depends on beta-catenin's
dual functions - maintaining cell-cell adhesion through adherens
junctions and regulating gene expression via Wnt signaling. This is a
core biological process where beta-catenin plays an essential, direct
role.
supported_by:
- reference_id: PMID:16102745
supporting_text: Conditional loss of beta-catenin in the presumptive
lens does not perturb the normal sequential appearance of lens fate
markers but results in a dramatic failure of the coordinated
epithelial cell behavior that constitutes lens morphogenesis
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is a key cytoplasmic component of the
cadherin-catenin complex at adherens junctions, linking the
cytoplasmic tail of E-cadherin to alpha-catenin and the actin
cytoskeleton ... This linkage is crucial for the adhesive function
of classical cadherins in forming stable cell-cell contacts in
epithelial and other tissues
retired: true
- term:
id: GO:0001944
label: vasculature development
evidence_type: IMP
original_reference_id: PMID:25083995
review:
summary: The cited paper reviews canonical Wnt signaling in vascular
development and barrier formation. Beta-catenin is essential for
endothelial cell differentiation and vessel patterning through Wnt
signaling. While important, this represents a tissue-specific
application of beta-catenin's core functions.
action: KEEP_AS_NON_CORE
reason: Vasculature development is a downstream developmental process that
utilizes beta-catenin's core signaling function. While beta-catenin is
required for vascular development through Wnt signaling, this is a
consequence of its transcriptional co-activator role in specific cell
types rather than a primary molecular function.
supported_by:
- reference_id: PMID:25083995
supporting_text: Canonical WNT signaling components in vascular
development and barrier formation.
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
- term:
id: GO:0010467
label: gene expression
evidence_type: IMP
original_reference_id: PMID:25083995
review:
summary: This overly broad term encompasses any process affecting gene
expression. While beta-catenin does regulate transcription as a
co-activator with TCF/LEF, this annotation lacks specificity about
mechanism or targets.
action: MODIFY
reason: The term 'gene expression' is too vague and uninformative.
Beta-catenin specifically functions as a transcriptional co-activator in
the canonical Wnt pathway. More specific terms like 'positive regulation
of transcription by RNA polymerase II' or 'canonical Wnt signaling
pathway' better capture its actual molecular function.
proposed_replacement_terms:
- id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
- id: GO:0060070
label: canonical Wnt signaling pathway
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes
- reference_id: PMID:25083995
supporting_text: Canonical WNT signaling components in vascular
development and barrier formation.
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:16040629
review:
summary: The cited paper shows beta-catenin regulates respiratory
epithelial differentiation. However, beta-catenin primarily acts as a
transcriptional co-activator, not repressor. Any negative regulation
would be indirect through activation of repressor genes or competition
for binding partners.
action: REMOVE
reason: Beta-catenin is fundamentally a transcriptional co-activator, not
a repressor. While Wnt/beta-catenin signaling can indirectly lead to
repression of certain genes (e.g., by activating expression of
transcriptional repressors), beta-catenin itself does not directly
negatively regulate transcription. This annotation misrepresents its
molecular function.
supported_by:
- reference_id: PMID:16040629
supporting_text: Beta-catenin regulates differentiation of respiratory
epithelial cells in vivo.
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IGI
original_reference_id: PMID:16478791
review:
summary: The cited paper shows APC inhibits ERK pathway activation. This
relates to APC's role in the beta-catenin destruction complex. However,
beta-catenin itself is not a direct component of MAPK signaling; any
connection is indirect through crosstalk.
action: REMOVE
reason: Beta-catenin is not a component of the MAPK cascade. The cited
paper discusses APC's effects on ERK signaling, but beta-catenin's
involvement would be indirect at best. Beta-catenin's primary signaling
role is in the canonical Wnt pathway, not MAPK signaling.
supported_by:
- reference_id: PMID:16478791
supporting_text: APC inhibits ERK pathway activation and cellular
proliferation induced by RAS.
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway
retired: true
- term:
id: GO:0000578
label: embryonic axis specification
evidence_type: IDA
original_reference_id: PMID:9230313
review:
summary: The cited paper on mouse Fused/Axin shows beta-catenin is
essential for embryonic axis formation. Beta-catenin stabilization
through Wnt signaling establishes the dorsal organizer and
anterior-posterior axis. This is a fundamental developmental role
demonstrated in multiple model organisms.
action: ACCEPT
reason: Embryonic axis specification is a well-established core
developmental function of beta-catenin through canonical Wnt signaling.
Stabilized beta-catenin in the dorsal region establishes the embryonic
organizer, essential for proper axis formation. This represents a direct
consequence of beta-catenin's transcriptional co-activator function.
supported_by:
- reference_id: PMID:9230313
supporting_text: The mouse Fused locus encodes Axin, an inhibitor of
the Wnt signaling pathway that regulates embryonic axis formation.
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: During embryogenesis, beta-catenin is required for
processes such as embryonic morphogenesis and axis specification, as
initially shown by studies in model organisms where ectopic
beta-catenin can induce a secondary body axis
- term:
id: GO:0000902
label: cell morphogenesis
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: The lens development study shows beta-catenin is required for
coordinated epithelial cell behavior and morphogenesis. Loss of
beta-catenin causes failure of proper cell shape changes during lens
morphogenesis. This involves both adhesion and signaling functions.
action: ACCEPT
reason: Cell morphogenesis is directly dependent on beta-catenin's dual
functions. Its role in adherens junctions maintains cell-cell contacts
essential for coordinated morphogenetic movements, while its signaling
function regulates genes controlling cell shape and behavior. This is a
core cellular process requiring beta-catenin.
supported_by:
- reference_id: PMID:16102745
supporting_text: Conditional loss of beta-catenin in the presumptive
lens does not perturb the normal sequential appearance of lens fate
markers but results in a dramatic failure of the coordinated
epithelial cell behavior that constitutes lens morphogenesis
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is a key cytoplasmic component of the
cadherin-catenin complex at adherens junctions
- term:
id: GO:0001501
label: skeletal system development
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: The cited paper shows canonical Wnt/beta-catenin signaling
prevents osteoblasts from differentiating into chondrocytes.
Beta-catenin regulates bone vs. cartilage cell fate decisions. While
important for skeletal development, this is a tissue-specific
application of its signaling function.
action: KEEP_AS_NON_CORE
reason: Skeletal system development is a tissue-specific developmental
process that uses beta-catenin's core Wnt signaling function. While
beta-catenin is essential for proper bone and cartilage development,
this represents a downstream consequence of its transcriptional
co-activator role rather than a primary molecular function.
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
- term:
id: GO:0001569
label: branching involved in blood vessel morphogenesis
evidence_type: IMP
original_reference_id: PMID:12975353
review:
summary: The cited study shows conditional inactivation of beta-catenin in
endothelial cells causes defective vascular patterning and increased
fragility. Beta-catenin in endothelial cells regulates vessel branching
through Wnt signaling. This is a specific developmental outcome of its
core functions.
action: KEEP_AS_NON_CORE
reason: Blood vessel branching morphogenesis is a specialized
developmental process in endothelial cells. While beta-catenin is
required, this represents tissue-specific utilization of its core Wnt
signaling and adhesion functions rather than a primary molecular role of
the protein.
supported_by:
- reference_id: PMID:12975353
supporting_text: The conditional inactivation of the beta-catenin gene
in endothelial cells causes a defective vascular pattern and
increased vascular fragility
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
- term:
id: GO:0001569
label: branching involved in blood vessel morphogenesis
evidence_type: IMP
original_reference_id: PMID:19154719
review:
summary: This paper shows Nrarp coordinates endothelial Notch and Wnt
signaling to control vessel density. Beta-catenin/Wnt signaling
interacts with Notch to regulate angiogenesis. This is another example
of beta-catenin's role in vascular development.
action: KEEP_AS_NON_CORE
reason: This is a duplicate annotation for the same process with different
evidence. Blood vessel morphogenesis utilizes beta-catenin's Wnt
signaling function in endothelial cells but represents a tissue-specific
developmental outcome rather than a core molecular function.
supported_by:
- reference_id: PMID:19154719
supporting_text: Nrarp coordinates endothelial Notch and Wnt signaling
to control vessel density in angiogenesis
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway
- term:
id: GO:0001570
label: vasculogenesis
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Paper shows beta-catenin signaling in lung mesenchyme affects
vasculogenesis. Beta-catenin/Wnt signaling regulates endothelial
differentiation and vessel formation. Tissue-specific developmental
application.
action: KEEP_AS_NON_CORE
reason: Vasculogenesis is a specialized developmental process in
endothelial cells. While beta-catenin is required through its Wnt
signaling function, this represents tissue-specific utilization rather
than a core molecular function.
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
- term:
id: GO:0001649
label: osteoblast differentiation
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: Paper shows canonical Wnt/beta-catenin signaling prevents
osteoblasts from transdifferentiating into chondrocytes. Beta-catenin
maintains osteoblast identity through target gene regulation.
action: KEEP_AS_NON_CORE
reason: Osteoblast differentiation is a specialized cell type-specific
process. While beta-catenin/Wnt signaling is important for bone cell
fate, this represents tissue-specific application of its core
transcriptional function.
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
retired: true
- term:
id: GO:0001658
label: branching involved in ureteric bud morphogenesis
evidence_type: IMP
original_reference_id: PMID:17537789
review:
summary: Wnt/beta-catenin signaling regulates nephron induction and
ureteric bud branching. Beta-catenin controls branching morphogenesis in
kidney development through target gene regulation.
action: KEEP_AS_NON_CORE
reason: Ureteric bud morphogenesis is a specialized kidney developmental
process. While beta-catenin signaling is required, this represents
organ-specific utilization of its core functions rather than a primary
role.
supported_by:
- reference_id: PMID:17537789
supporting_text: Wnt/beta-catenin signaling regulates nephron
induction during mouse kidney development
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In organ development, beta-catenin plays essential
roles... in the formation of organs like the kidney
- term:
id: GO:0001701
label: in utero embryonic development
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Beta-catenin is essential for embryonic development. Null mutants
are embryonic lethal with failures in gastrulation and morphogenesis.
Required for both adhesion and signaling during embryogenesis.
action: ACCEPT
reason: In utero embryonic development is a fundamental process absolutely
requiring beta-catenin. Both its adhesion and signaling functions are
essential for embryo viability, morphogenesis, and organ formation. This
represents a core developmental requirement.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Germline knockout of Ctnnb1 in mice is embryonic
lethal – embryos lacking beta-catenin cannot complete
pre-implantation development properly, partly because the
blastomeres fail to remain adherent without beta-catenin-mediated
adhesion
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling
- term:
id: GO:0001701
label: in utero embryonic development
evidence_type: IGI
original_reference_id: PMID:19204372
review:
summary: Study of Axin mutants shows interaction with beta-catenin pathway
in embryonic development. Axin regulates beta-catenin stability;
disruption causes embryonic defects.
action: ACCEPT
reason: Additional genetic evidence for beta-catenin's essential role in
embryonic development. The Axin-beta-catenin interaction is crucial for
proper Wnt signaling regulation during embryogenesis.
supported_by:
- reference_id: PMID:19204372
supporting_text: Both the RGS domain and the six C-terminal amino
acids of mouse Axin are required for normal embryogenesis
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the absence of Wnt signal, free beta-catenin... is
phosphorylated on N-terminal serine/threonine residues by a
'destruction complex' consisting of AXIN, APC, casein kinase 1, and
GSK3β
- term:
id: GO:0001702
label: gastrulation with mouth forming second
evidence_type: IMP
original_reference_id: PMID:8582267
review:
summary: The landmark paper shows beta-catenin null embryos fail at
gastrulation. Mutant embryos cannot form mesoderm and show ectodermal
cell detachment. Beta-catenin is absolutely required for gastrulation
through both its adhesion and signaling functions.
action: ACCEPT
reason: Gastrulation is a fundamental embryonic process that absolutely
requires beta-catenin. The protein's dual functions - maintaining cell
adhesion for morphogenetic movements and Wnt signaling for mesoderm
induction - are both essential. This represents a core developmental
role directly mediated by beta-catenin's molecular functions.
supported_by:
- reference_id: PMID:8582267
supporting_text: beta-Catenin null-mutant embryos formed blastocysts,
implanted and developed into egg-cylinder-stage embryos. At day 7
post coitum, the development of the embryonic ectoderm was affected
in mutant embryos. Cells detached from the ectodermal cell layer and
were dispersed into the proamniotic cavity. No mesoderm formation
was observed in mutant embryos
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Germline knockout of Ctnnb1 in mice is embryonic
lethal – embryos lacking beta-catenin cannot complete
pre-implantation development properly
- term:
id: GO:0001706
label: endoderm formation
evidence_type: IMP
original_reference_id: PMID:12194849
review:
summary: The cited paper shows deletion of beta-catenin in embryonic
endoderm causes formation of multiple hearts, demonstrating
beta-catenin's essential role in endoderm specification and patterning.
Wnt/beta-catenin signaling is required for proper endoderm formation.
action: ACCEPT
reason: Endoderm formation is a fundamental germ layer specification
process that requires beta-catenin's Wnt signaling function.
Beta-catenin/TCF complexes directly activate endodermal gene expression
programs. This is a core developmental role directly mediated by its
transcriptional co-activator function.
supported_by:
- reference_id: PMID:12194849
supporting_text: Formation of multiple hearts in mice following
deletion of beta-catenin in the embryonic endoderm
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is required for processes such as
embryonic morphogenesis and axis specification
- term:
id: GO:0001706
label: endoderm formation
evidence_type: IMP
original_reference_id: PMID:23824574
review:
summary: This paper demonstrates Wnt/beta-catenin signaling regulates
Sox17 expression and is essential for organizer and endoderm formation
in mouse. Beta-catenin directly regulates endodermal transcription
factors.
action: ACCEPT
reason: Additional strong evidence for beta-catenin's essential role in
endoderm formation. The protein acts as a transcriptional co-activator
to directly induce endodermal gene expression programs including Sox17.
This is a core developmental function.
supported_by:
- reference_id: PMID:23824574
supporting_text: Wnt/β-catenin signalling regulates Sox17 expression
and is essential for organizer and endoderm formation in the mouse
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes
- term:
id: GO:0001708
label: cell fate specification
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: Paper shows Wnt/beta-catenin signaling controls osteoblast vs
chondrocyte fate decisions. Beta-catenin directly regulates cell fate
through transcriptional control of lineage-specific genes.
action: ACCEPT
reason: Cell fate specification is a core function of beta-catenin through
Wnt signaling. As a transcriptional co-activator, beta-catenin/TCF
complexes directly control expression of cell fate determinants. This is
one of its primary biological roles.
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development
- term:
id: GO:0001711
label: endodermal cell fate commitment
evidence_type: IMP
original_reference_id: PMID:12194849
review:
summary: Deletion of beta-catenin in embryonic endoderm disrupts proper
endodermal development. Beta-catenin/Wnt signaling directly controls
endodermal cell fate commitment through target gene regulation.
action: ACCEPT
reason: Endodermal cell fate commitment is a fundamental developmental
process directly mediated by beta-catenin's transcriptional co-activator
function. Beta-catenin/TCF complexes activate endoderm-specific gene
expression programs essential for germ layer specification.
supported_by:
- reference_id: PMID:12194849
supporting_text: Formation of multiple hearts in mice following
deletion of beta-catenin in the embryonic endoderm
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: During embryogenesis, beta-catenin is required for
processes such as embryonic morphogenesis and axis specification
- term:
id: GO:0001764
label: neuron migration
evidence_type: IGI
original_reference_id: PMID:21937711
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:21937711
supporting_text: ASPM regulates Wnt signaling pathway activity in the
developing brain.
- term:
id: GO:0001822
label: kidney development
evidence_type: IMP
original_reference_id: PMID:17537789
review:
summary: The cited paper shows Wnt/beta-catenin signaling regulates
nephron induction during kidney development. Beta-catenin is required
for proper kidney morphogenesis through its signaling function in
nephron progenitors.
action: KEEP_AS_NON_CORE
reason: Kidney development is an organ-specific developmental process that
utilizes beta-catenin's core Wnt signaling function. While essential for
nephrogenesis, this represents a tissue-specific application rather than
a primary molecular function of the protein.
supported_by:
- reference_id: PMID:17537789
supporting_text: Wnt/beta-catenin signaling regulates nephron
induction during mouse kidney development
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In organ development, beta-catenin plays essential
roles; for instance, it functions in nervous system development and
the regulation of neurogenesis, as well as in the formation of
organs like the kidney, lungs, and limbs
- term:
id: GO:0001840
label: neural plate development
evidence_type: IDA
original_reference_id: PMID:22102609
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:22102609
supporting_text: Increased β-catenin activity in the anterior neural
plate induces ectopic mid-hindbrain characteristics.
- term:
id: GO:0001894
label: tissue homeostasis
evidence_type: IMP
original_reference_id: PMID:18635608
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18635608
supporting_text: Tissue-specific requirements of beta-catenin in
external genitalia development.
- term:
id: GO:0001944
label: vasculature development
evidence_type: IMP
original_reference_id: PMID:19129494
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19129494
supporting_text: Wnt/beta-catenin signaling is required for CNS, but
not non-CNS, angiogenesis.
- term:
id: GO:0002052
label: positive regulation of neuroblast proliferation
evidence_type: IGI
original_reference_id: PMID:21937711
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:21937711
supporting_text: ASPM regulates Wnt signaling pathway activity in the
developing brain.
- term:
id: GO:0002053
label: positive regulation of mesenchymal cell proliferation
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0002053
label: positive regulation of mesenchymal cell proliferation
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
- term:
id: GO:0002062
label: chondrocyte differentiation
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
retired: true
- term:
id: GO:0002062
label: chondrocyte differentiation
evidence_type: IGI
original_reference_id: PMID:16818445
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:16818445
supporting_text: Wnt9a signaling is required for joint integrity and
regulation of Ihh during chondrogenesis.
retired: true
- term:
id: GO:0002089
label: lens morphogenesis in camera-type eye
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:16102745
supporting_text: 'The duality of beta-catenin function: a requirement in
lens morphogenesis and signaling suppression of lens fate in periocular
ectoderm.'
- term:
id: GO:0003266
label: regulation of secondary heart field cardioblast proliferation
evidence_type: IDA
original_reference_id: PMID:19620969
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19620969
supporting_text: A regulatory pathway involving
Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
- term:
id: GO:0003338
label: metanephros morphogenesis
evidence_type: IMP
original_reference_id: PMID:19060336
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19060336
supporting_text: A Wnt7b-dependent pathway regulates the orientation
of epithelial cell division and establishes the cortico-medullary
axis of the mammalian kidney.
- term:
id: GO:0003340
label: negative regulation of mesenchymal to epithelial transition
involved in metanephros morphogenesis
evidence_type: IDA
original_reference_id: PMID:17537789
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:17537789
supporting_text: Wnt/beta-catenin signaling regulates nephron
induction during mouse kidney development.
- term:
id: GO:0006351
label: DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: Beta-catenin functions as a transcriptional co-activator with
TCF/LEF to regulate gene expression. While accurate, this term is very
broad and doesn't specify the regulatory nature or pathway context.
action: MODIFY
reason: While beta-catenin does participate in DNA-templated
transcription, this term is too general. More specific terms like
'positive regulation of transcription by RNA polymerase II' or
'canonical Wnt signaling pathway' better capture its specific role as a
co-activator.
proposed_replacement_terms:
- id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
- id: GO:0003713
label: transcription coactivator activity
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
retired: true
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:12235125
review:
summary: The cited paper shows beta-catenin induces melanoma growth by
activating Microphthalmia-associated transcription factor. This
demonstrates beta-catenin's role as a transcriptional co-activator
regulating RNA Pol II-dependent genes.
action: ACCEPT
reason: Regulation of transcription by RNA polymerase II is a core
molecular function of beta-catenin as a transcriptional co-activator. In
the nucleus, beta-catenin forms complexes with TCF/LEF to regulate
target gene transcription. This is one of its two primary molecular
functions.
supported_by:
- reference_id: PMID:12235125
supporting_text: Beta-catenin-induced melanoma growth requires the
downstream target Microphthalmia-associated transcription factor
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:12464179
review:
summary: This paper identifies Wnt/Dvl/beta-catenin to Pitx2 pathway
mediating cell-type-specific proliferation. Beta-catenin acts as
transcriptional co-activator to regulate Pitx2 and downstream genes.
action: ACCEPT
reason: Additional evidence for beta-catenin's core function in regulating
RNA Pol II transcription. The protein functions as an essential
co-activator in the Wnt pathway to control gene expression programs.
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin acts as a co-activator for TCF/LEF
transcription factors
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:20043884
review:
summary: Beta-catenin regulates transcription by RNA polymerase II as a
core transcriptional co-activator function.
action: ACCEPT
reason: Regulation of transcription by RNA polymerase II is a core
molecular function of beta-catenin as a transcriptional co-activator. In
the nucleus, beta-catenin forms complexes with TCF/LEF to regulate
target gene transcription, which is one of its two primary molecular
functions.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:20043884
supporting_text: Antagonistic crosstalk of Wnt/beta-catenin/Bmp
signaling within the Apical Ectodermal Ridge (AER) regulates
interdigit formation.
- term:
id: GO:0006366
label: transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:15907834
review:
summary: Paper shows Wnt/beta-catenin signaling acts upstream of N-myc,
BMP4, and FGF signaling in lung patterning. Beta-catenin functions as a
transcriptional co-activator to regulate RNA Pol II-mediated gene
expression.
action: ACCEPT
reason: Transcription by RNA polymerase II is a core molecular function of
beta-catenin as a transcriptional co-activator. In the nucleus,
beta-catenin/TCF complexes directly regulate RNA Pol II-dependent
transcription of target genes.
supported_by:
- reference_id: PMID:15907834
supporting_text: Wnt/beta-catenin signaling acts upstream of N-myc,
BMP4, and FGF signaling to regulate proximal-distal patterning in
the lung
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator
for TCF/LEF transcription factors, forming a transcriptional complex
that drives expression of Wnt target genes
retired: true
- term:
id: GO:0007160
label: cell-matrix adhesion
evidence_type: IMP
original_reference_id: PMID:15131783
review:
summary: The cited paper examines beta-catenin loss in gastrointestinal
tract. While beta-catenin is essential for cell-cell adhesion through
adherens junctions, it does not directly mediate cell-matrix adhesion,
which involves integrins and focal adhesions.
action: REMOVE
reason: Beta-catenin is not a component of cell-matrix adhesion complexes.
It specifically functions in cell-cell adhesion through adherens
junctions by linking cadherins to the cytoskeleton. Cell-matrix adhesion
involves different molecular machinery (integrins, focal adhesions) that
beta-catenin does not participate in.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is a key cytoplasmic component of the
cadherin-catenin complex at adherens junctions, linking the
cytoplasmic tail of E-cadherin to alpha-catenin and the actin
cytoskeleton
- reference_id: PMID:15131783
supporting_text: 'Inducible Cre-mediated control of gene expression in the
murine gastrointestinal tract: effect of loss of beta-catenin'
- term:
id: GO:0007249
label: canonical NF-kappaB signal transduction
evidence_type: IMP
original_reference_id: PMID:19619491
review:
summary: The paper describes reciprocal requirements between
EDA/EDAR/NF-kappaB and Wnt/beta-catenin pathways in hair follicle
development. This shows pathway crosstalk but doesn't make beta-catenin
a component of NF-kappaB signaling.
action: REMOVE
reason: Beta-catenin is not a component of the NF-kappaB signaling
pathway. The cited paper shows crosstalk between distinct pathways (Wnt
and NF-kappaB) in a specific developmental context. Beta-catenin
mediates Wnt signaling, not NF-kappaB signaling.
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway
retired: true
- term:
id: GO:0007268
label: chemical synaptic transmission
evidence_type: IMP
original_reference_id: PMID:14622577
review:
summary: The cited paper shows beta-catenin has a role in synaptic vesicle
localization and presynaptic assembly. Beta-catenin localizes to
synapses and affects neurotransmitter release machinery organization.
While important, this is a specialized neuronal application.
action: KEEP_AS_NON_CORE
reason: Synaptic transmission represents a specialized neuronal
utilization of beta-catenin's adhesion function. While beta-catenin
contributes to synapse organization, this is a tissue-specific role
rather than a core molecular function. The primary functions remain cell
adhesion and transcriptional co-activation.
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin has been observed in specific
subcellular structures... including the postsynaptic density and
synaptic membranes in hippocampal neurons
- term:
id: GO:0007398
label: ectoderm development
evidence_type: IMP
original_reference_id: PMID:8582267
review:
summary: Beta-catenin null embryos show specific defects in embryonic
ectoderm with cell detachment and dispersal. Beta-catenin is essential
for ectodermal integrity through its adhesion function and for proper
differentiation through Wnt signaling.
action: ACCEPT
reason: Ectoderm development is a fundamental germ layer formation process
requiring both beta-catenin functions. Its adhesion role maintains
ectodermal layer integrity while its signaling function controls
differentiation. This is a core developmental requirement.
supported_by:
- reference_id: PMID:8582267
supporting_text: At day 7 post coitum, the development of the
embryonic ectoderm was affected in mutant embryos. Cells detached
from the ectodermal cell layer and were dispersed into the
proamniotic cavity
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Our results demonstrate that, although beta-catenin
is expressed rather ubiquitously, it is specifically required in the
ectodermal cell layer
- term:
id: GO:0007403
label: glial cell fate determination
evidence_type: IDA
original_reference_id: PMID:17706960
review:
summary: Paper shows persistent stabilized beta-catenin expression delays
radial glial cell maturation. Beta-catenin/Wnt signaling regulates the
timing of glial differentiation in the developing brain.
action: KEEP_AS_NON_CORE
reason: Glial cell fate determination is a specialized neural
developmental process. While beta-catenin signaling influences glial
differentiation timing, this represents tissue-specific application of
its core transcriptional function rather than a primary role.
supported_by:
- reference_id: PMID:17706960
supporting_text: Persistent expression of stabilized beta-catenin
delays maturation of radial glial cells into intermediate
progenitors
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin plays essential roles... in nervous
system development and the regulation of neurogenesis
- term:
id: GO:0007405
label: neuroblast proliferation
evidence_type: IGI
original_reference_id: PMID:21937711
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:21937711
supporting_text: ASPM regulates Wnt signaling pathway activity in the
developing brain.
retired: true
- term:
id: GO:0007507
label: heart development
evidence_type: IMP
original_reference_id: PMID:12464179
review:
summary: The paper identifies Wnt/beta-catenin to Pitx2 pathway in cardiac
development. Beta-catenin signaling regulates cardiac progenitor
proliferation and differentiation. Important for heart morphogenesis but
represents organ-specific utilization.
action: KEEP_AS_NON_CORE
reason: Heart development is an organ-specific process that uses
beta-catenin's Wnt signaling function in cardiac progenitors. While
required for proper cardiac morphogenesis, this is a developmental
application of its core transcriptional co-activator function rather
than a primary role.
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin activity influences processes like cell
proliferation and differentiation
- term:
id: GO:0008104
label: intracellular protein localization
evidence_type: IMP
original_reference_id: PMID:16621792
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:16621792
supporting_text: 'Epub 2006 Apr 17. Membrane localization of adenomatous
polyposis coli protein at cellular protrusions: targeting sequences and
regulation by beta-catenin.'
- term:
id: GO:0008283
label: cell population proliferation
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: The paper shows Wnt signaling regulates smooth muscle precursor
development via tenascin C/PDGFR pathway. Beta-catenin/Wnt signaling
promotes proliferation of lung mesenchymal cells. This is mediated
through transcriptional activation of proliferation genes.
action: ACCEPT
reason: Cell proliferation is a core biological process regulated by
beta-catenin through Wnt signaling. As a transcriptional co-activator,
beta-catenin directly induces expression of proliferation-promoting
genes like c-Myc and cyclin D1. This is a fundamental cellular outcome
of its signaling function.
supported_by:
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development
retired: true
- term:
id: GO:0008283
label: cell population proliferation
evidence_type: IMP
original_reference_id: PMID:15131783
review:
summary: Loss of beta-catenin in gastrointestinal tract affects
proliferation. Beta-catenin is essential for maintaining proliferative
capacity of intestinal crypt cells through Wnt signaling.
action: ACCEPT
reason: Additional evidence for beta-catenin's core role in regulating
cell proliferation. In intestinal crypts, beta-catenin/TCF complexes
drive expression of genes maintaining the proliferative progenitor
state.
supported_by:
- reference_id: PMID:15131783
supporting_text: 'Inducible Cre-mediated control of gene expression in the
murine gastrointestinal tract: effect of loss of beta-catenin'
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is highly expressed in self-renewing and
progenitor cell populations – for instance, in the intestinal
epithelium, which has a high turnover, beta-catenin is expressed in
crypt progenitor cells where Wnt signaling actively drives
proliferation
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0008543
label: fibroblast growth factor receptor signaling pathway
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
retired: true
- term:
id: GO:0009948
label: anterior/posterior axis specification
evidence_type: IMP
original_reference_id: PMID:10662781
review:
summary: The landmark paper demonstrates requirement for beta-catenin in
anterior-posterior axis formation in mice. Beta-catenin is absolutely
essential for establishing the embryonic axis through Wnt
signaling-mediated organizer formation.
action: ACCEPT
reason: Anterior-posterior axis specification is a fundamental embryonic
patterning process that directly requires beta-catenin's transcriptional
co-activator function. Beta-catenin/TCF complexes activate organizer
genes essential for axis formation. This is a core developmental role.
supported_by:
- reference_id: PMID:10662781
supporting_text: Requirement for beta-catenin in anterior-posterior
axis formation in mice
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: During embryogenesis, beta-catenin is required for
processes such as embryonic morphogenesis and axis specification, as
initially shown by studies in model organisms where ectopic
beta-catenin can induce a secondary body axis
- term:
id: GO:0009950
label: dorsal/ventral axis specification
evidence_type: IMP
original_reference_id: PMID:12923052
review:
summary: The paper shows genetic interaction between Wnt/beta-catenin and
BMP signaling during AER formation and dorsal-ventral axis specification
in limb. Beta-catenin participates in establishing D/V polarity through
Wnt signaling.
action: ACCEPT
reason: Dorsal/ventral axis specification is another fundamental
patterning process requiring beta-catenin. Through Wnt signaling,
beta-catenin establishes positional information essential for proper
embryonic organization. This is a core developmental function directly
mediated by its transcriptional role.
supported_by:
- reference_id: PMID:12923052
supporting_text: Genetic interaction between Wnt/beta-catenin and BMP
receptor signaling during formation of the AER and the
dorsal-ventral axis in the limb
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is required for processes such as
embryonic morphogenesis and axis specification
- term:
id: GO:0009953
label: dorsal/ventral pattern formation
evidence_type: IMP
original_reference_id: PMID:15708565
review:
summary: The paper shows effects of canonical Wnt signaling on
dorso-ventral specification of mouse telencephalon. Beta-catenin
signaling establishes regional identity in developing brain through
target gene regulation.
action: ACCEPT
reason: Pattern formation is a core developmental process directly
mediated by beta-catenin's transcriptional co-activator function.
Beta-catenin/Wnt signaling establishes positional information and
regional identity essential for proper tissue organization.
supported_by:
- reference_id: PMID:15708565
supporting_text: Effects of canonical Wnt signaling on dorso-ventral
specification of the mouse telencephalon
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development
- term:
id: GO:0009954
label: proximal/distal pattern formation
evidence_type: IMP
original_reference_id: PMID:12885771
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:12885771
supporting_text: 2003 Jul 28. beta-Catenin is required for
specification of proximal/distal cell fate during lung
morphogenesis.
- term:
id: GO:0010463
label: mesenchymal cell proliferation
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
retired: true
- term:
id: GO:0010463
label: mesenchymal cell proliferation
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
retired: true
- term:
id: GO:0010468
label: regulation of gene expression
evidence_type: IMP
original_reference_id: PMID:22102609
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:22102609
supporting_text: Increased β-catenin activity in the anterior neural
plate induces ectopic mid-hindbrain characteristics.
- term:
id: GO:0010628
label: positive regulation of gene expression
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0010628
label: positive regulation of gene expression
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0010718
label: positive regulation of epithelial to mesenchymal transition
evidence_type: ISO
original_reference_id: GO_REF:0000008
review:
summary: Beta-catenin/Wnt signaling can promote EMT through
transcriptional regulation of EMT genes. Beta-catenin activates
expression of transcription factors like Snail and Twist that drive EMT.
This is based on orthology inference.
action: ACCEPT
reason: EMT regulation is a well-established function of beta-catenin
through Wnt signaling. Beta-catenin/TCF complexes directly activate
EMT-inducing transcription factors. This is important in both
development and cancer progression.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin has been implicated in
epithelial-to-mesenchymal transition (EMT), a process important in
development and cancer metastasis (consistent with its Wnt signaling
function)
- reference_id: GO_REF:0000008
supporting_text: Gene Ontology annotation by the MGI curatorial staff,
curated orthology
- term:
id: GO:0016331
label: morphogenesis of embryonic epithelium
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:16102745
supporting_text: 'The duality of beta-catenin function: a requirement in
lens morphogenesis and signaling suppression of lens fate in periocular
ectoderm.'
- term:
id: GO:0021819
label: layer formation in cerebral cortex
evidence_type: IMP
original_reference_id: PMID:20503375
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:20503375
supporting_text: Expression analysis of an evolutionarily conserved
metallophosphodiesterase gene, Mpped1, in the normal and
beta-catenin-deficient malformed dorsal telencephalon.
- term:
id: GO:0022009
label: central nervous system vasculogenesis
evidence_type: IMP
original_reference_id: PMID:19023080
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19023080
supporting_text: Canonical Wnt signaling regulates organ-specific
assembly and differentiation of CNS vasculature.
- term:
id: GO:0022405
label: hair cycle process
evidence_type: IMP
original_reference_id: PMID:11371349
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:11371349
supporting_text: beta-Catenin controls hair follicle morphogenesis and
stem cell differentiation in the skin.
- term:
id: GO:0030097
label: hemopoiesis
evidence_type: IDA
original_reference_id: PMID:12717450
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:12717450
supporting_text: A role for Wnt signalling in self-renewal of
haematopoietic stem cells.
- term:
id: GO:0030154
label: cell differentiation
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: The lens development study shows beta-catenin regulates
epithelial differentiation. Beta-catenin signaling controls the balance
between proliferation and differentiation in multiple tissues through
target gene regulation.
action: ACCEPT
reason: Cell differentiation is a fundamental process regulated by
beta-catenin through Wnt signaling. As a transcriptional co-activator,
beta-catenin controls expression of differentiation genes and cell fate
determinants. This is a core biological function directly mediated by
its signaling role.
supported_by:
- reference_id: PMID:16102745
supporting_text: 'The duality of beta-catenin function: a requirement in
lens morphogenesis and signaling suppression of lens fate in periocular
ectoderm'
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development
retired: true
- term:
id: GO:0030217
label: T cell differentiation
evidence_type: IMP
original_reference_id: PMID:14608382
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:14608382
supporting_text: Deletion of beta-catenin impairs T cell development.
- term:
id: GO:0030316
label: osteoclast differentiation
evidence_type: IMP
original_reference_id: PMID:15866165
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0030324
label: lung development
evidence_type: IMP
original_reference_id: PMID:12885771
review:
summary: The cited paper shows beta-catenin is required for
proximal/distal cell fate specification during lung morphogenesis.
Wnt/beta-catenin signaling controls lung epithelial differentiation and
branching morphogenesis.
action: KEEP_AS_NON_CORE
reason: Lung development is an organ-specific process utilizing
beta-catenin's Wnt signaling function. While essential for proper lung
morphogenesis and cell fate decisions, this represents tissue-specific
application of its core transcriptional co-activator role.
supported_by:
- reference_id: PMID:12885771
supporting_text: beta-Catenin is required for specification of
proximal/distal cell fate during lung morphogenesis
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In organ development, beta-catenin plays essential
roles... in the formation of organs like the kidney, lungs, and
limbs
- term:
id: GO:0048709
label: oligodendrocyte differentiation
evidence_type: IMP
original_reference_id: PMID:19503085
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:19503085
supporting_text: HDAC1 and HDAC2 regulate oligodendrocyte
differentiation by disrupting the beta-catenin-TCF interaction.
retired: true
- term:
id: GO:0051450
label: myoblast proliferation
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
retired: true
- term:
id: GO:0060441
label: epithelial tube branching involved in lung morphogenesis
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
retired: true
- term:
id: GO:0060487
label: lung epithelial cell differentiation
evidence_type: IMP
original_reference_id: PMID:16040629
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:16040629
supporting_text: Beta-catenin regulates differentiation of respiratory
epithelial cells in vivo.
retired: true
- term:
id: GO:0060767
label: epithelial cell proliferation involved in prostate gland
development
evidence_type: IMP
original_reference_id: PMID:12813461
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:12813461
supporting_text: Activation of beta-catenin in prostate epithelium
induces hyperplasias and squamous transdifferentiation.
retired: true
- term:
id: GO:0072089
label: stem cell proliferation
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
retired: true
- term:
id: GO:0097190
label: apoptotic signaling pathway
evidence_type: IMP
original_reference_id: PMID:15131783
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:15131783
supporting_text: 'Inducible Cre-mediated control of gene expression in the
murine gastrointestinal tract: effect of loss of beta-catenin.'
retired: true
- term:
id: GO:0097190
label: apoptotic signaling pathway
evidence_type: IMP
original_reference_id: PMID:20454446
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
retired: true
- term:
id: GO:0097190
label: apoptotic signaling pathway
evidence_type: IGI
original_reference_id: PMID:20454446
review:
summary: Beta-catenin is involved in this process through its core
functions in cell adhesion and/or Wnt signaling. Requires further
specific evaluation based on cited evidence.
action: KEEP_AS_NON_CORE
reason: This represents a downstream developmental or cellular process
that utilizes beta-catenin's core molecular functions (adhesion and/or
transcriptional co-activation) in a tissue- or context-specific manner
rather than being a primary function of the protein itself.
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin also serves as a central effector in the
canonical Wnt signaling pathway, which controls cell proliferation,
differentiation, and fate during development and tissue homeostasis
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
retired: true
- term:
id: GO:0032212
label: positive regulation of telomere maintenance via telomerase
evidence_type: IMP
original_reference_id: PMID:22723415
review:
summary: Paper shows Wnt/beta-catenin signaling regulates telomerase in
stem cells and cancer. Beta-catenin/TCF complexes directly activate TERT
expression, linking Wnt signaling to telomerase activity.
action: KEEP_AS_NON_CORE
reason: Telomerase regulation is a specialized function in stem cells and
cancer cells. While beta-catenin can regulate TERT expression through
Wnt signaling, this represents a specific transcriptional target rather
than a core function of the protein.
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin/TCF complexes directly activate
transcription of specific target genes
- term:
id: GO:0001222
label: transcription corepressor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016358
label: dendrite development
evidence_type: IGI
original_reference_id: PMID:27713508
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27713508
supporting_text: Conditional Knockout of Breast Carcinoma Amplified
Sequence 2 (BCAS2) in Mouse Forebrain Causes Dendritic Malformation
via β-catenin.
- term:
id: GO:0001222
label: transcription corepressor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060856
label: establishment of blood-brain barrier
evidence_type: IMP
original_reference_id: PMID:25083995
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25083995
supporting_text: Canonical WNT signaling components in vascular
development and barrier formation.
- term:
id: GO:1990963
label: establishment of blood-retinal barrier
evidence_type: IMP
original_reference_id: PMID:25083995
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25083995
supporting_text: Canonical WNT signaling components in vascular
development and barrier formation.
- term:
id: GO:0001709
label: cell fate determination
evidence_type: IMP
original_reference_id: PMID:15708565
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15708565
supporting_text: Effects of canonical Wnt signaling on dorso-ventral
specification of the mouse telencephalon.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:15024079
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15024079
supporting_text: Brn-2 expression controls melanoma proliferation and
is directly regulated by beta-catenin.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:15778706
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15778706
supporting_text: Wnt signalling induces maturation of Paneth cells in
intestinal crypts.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:15907834
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15907834
supporting_text: Wnt/beta-catenin signaling acts upstream of N-myc,
BMP4, and FGF signaling to regulate proximal-distal patterning in
the lung.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:16581771
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16581771
supporting_text: CCN1/Cyr61 is regulated by the canonical Wnt signal
and plays an important role in Wnt3A-induced osteoblast
differentiation of mesenchymal stem cells.
- term:
id: GO:0030154
label: cell differentiation
evidence_type: IMP
original_reference_id: PMID:15131783
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15131783
supporting_text: 'Inducible Cre-mediated control of gene expression in the
murine gastrointestinal tract: effect of loss of beta-catenin.'
- term:
id: GO:0030154
label: cell differentiation
evidence_type: IMP
original_reference_id: PMID:16192304
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16192304
supporting_text: Beta-catenin is essential for pancreatic acinar but
not islet development.
- term:
id: GO:0030324
label: lung development
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0030539
label: male genitalia development
evidence_type: IMP
original_reference_id: PMID:19282366
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19282366
supporting_text: Mar 12. Genetic interactions of the androgen and
Wnt/beta-catenin pathways for the masculinization of external
genitalia.
- term:
id: GO:0030856
label: regulation of epithelial cell differentiation
evidence_type: IMP
original_reference_id: PMID:12813461
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12813461
supporting_text: Activation of beta-catenin in prostate epithelium
induces hyperplasias and squamous transdifferentiation.
- term:
id: GO:0030858
label: positive regulation of epithelial cell differentiation
evidence_type: IMP
original_reference_id: PMID:16040629
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16040629
supporting_text: Beta-catenin regulates differentiation of respiratory
epithelial cells in vivo.
- term:
id: GO:0030900
label: forebrain development
evidence_type: IMP
original_reference_id: PMID:15708565
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15708565
supporting_text: Effects of canonical Wnt signaling on dorso-ventral
specification of the mouse telencephalon.
- term:
id: GO:0031016
label: pancreas development
evidence_type: IMP
original_reference_id: PMID:16192304
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16192304
supporting_text: Beta-catenin is essential for pancreatic acinar but
not islet development.
- term:
id: GO:0031069
label: hair follicle morphogenesis
evidence_type: IMP
original_reference_id: PMID:11371349
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11371349
supporting_text: beta-Catenin controls hair follicle morphogenesis and
stem cell differentiation in the skin.
- term:
id: GO:0031069
label: hair follicle morphogenesis
evidence_type: IMP
original_reference_id: PMID:24309208
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24309208
supporting_text: 2013 Dec 3. Wnt/β-catenin signaling in dermal
condensates is required for hair follicle formation.
- term:
id: GO:0031641
label: regulation of myelination
evidence_type: IMP
original_reference_id: PMID:19515974
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19515974
supporting_text: Dysregulation of the Wnt pathway inhibits timely
myelination and remyelination in the mammalian CNS.
- term:
id: GO:0032331
label: negative regulation of chondrocyte differentiation
evidence_type: IGI
original_reference_id: PMID:16818445
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16818445
supporting_text: Wnt9a signaling is required for joint integrity and
regulation of Ihh during chondrogenesis.
- term:
id: GO:0033077
label: T cell differentiation in thymus
evidence_type: IMP
original_reference_id: PMID:16025118
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16025118
supporting_text: Loss of adenomatous polyposis coli gene function
disrupts thymic development.
- term:
id: GO:0034332
label: adherens junction organization
evidence_type: IMP
original_reference_id: PMID:19129494
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19129494
supporting_text: Wnt/beta-catenin signaling is required for CNS, but
not non-CNS, angiogenesis.
- term:
id: GO:0035050
label: embryonic heart tube development
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0035112
label: genitalia morphogenesis
evidence_type: IMP
original_reference_id: PMID:18635608
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18635608
supporting_text: Tissue-specific requirements of beta-catenin in
external genitalia development.
- term:
id: GO:0035115
label: embryonic forelimb morphogenesis
evidence_type: IDA
original_reference_id: PMID:15371327
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15371327
supporting_text: Wnt/beta-catenin signaling is sufficient and
necessary for synovial joint formation.
- term:
id: GO:0035116
label: embryonic hindlimb morphogenesis
evidence_type: IMP
original_reference_id: PMID:12923052
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12923052
supporting_text: Genetic interaction between Wnt/beta-catenin and BMP
receptor signaling during formation of the AER and the
dorsal-ventral axis in the limb.
- term:
id: GO:0035116
label: embryonic hindlimb morphogenesis
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0042127
label: regulation of cell population proliferation
evidence_type: IDA
original_reference_id: PMID:12235125
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12235125
supporting_text: Sep 16. Beta-catenin-induced melanoma growth requires
the downstream target Microphthalmia-associated transcription
factor.
- term:
id: GO:0042127
label: regulation of cell population proliferation
evidence_type: IMP
original_reference_id: PMID:17055474
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17055474
supporting_text: 2006 Jun 27. The stabilization of beta-catenin leads
to impaired primordial germ cell development via aberrant cell cycle
progression.
- term:
id: GO:0042127
label: regulation of cell population proliferation
evidence_type: IMP
original_reference_id: PMID:18635608
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18635608
supporting_text: Tissue-specific requirements of beta-catenin in
external genitalia development.
- term:
id: GO:0042129
label: regulation of T cell proliferation
evidence_type: IMP
original_reference_id: PMID:14608382
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14608382
supporting_text: Deletion of beta-catenin impairs T cell development.
- term:
id: GO:0042475
label: odontogenesis of dentin-containing tooth
evidence_type: IMP
original_reference_id: PMID:15866165
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0042733
label: embryonic digit morphogenesis
evidence_type: IMP
original_reference_id: PMID:12923052
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12923052
supporting_text: Genetic interaction between Wnt/beta-catenin and BMP
receptor signaling during formation of the AER and the
dorsal-ventral axis in the limb.
- term:
id: GO:0042733
label: embryonic digit morphogenesis
evidence_type: IMP
original_reference_id: PMID:20043884
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20043884
supporting_text: Antagonistic crosstalk of Wnt/beta-catenin/Bmp
signaling within the Apical Ectodermal Ridge (AER) regulates
interdigit formation.
- term:
id: GO:0042733
label: embryonic digit morphogenesis
evidence_type: IGI
original_reference_id: PMID:20043884
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20043884
supporting_text: Antagonistic crosstalk of Wnt/beta-catenin/Bmp
signaling within the Apical Ectodermal Ridge (AER) regulates
interdigit formation.
- term:
id: GO:0042981
label: regulation of apoptotic process
evidence_type: IMP
original_reference_id: PMID:20043884
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20043884
supporting_text: Antagonistic crosstalk of Wnt/beta-catenin/Bmp
signaling within the Apical Ectodermal Ridge (AER) regulates
interdigit formation.
- term:
id: GO:0043410
label: positive regulation of MAPK cascade
evidence_type: IGI
original_reference_id: PMID:16478791
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16478791
supporting_text: APC inhibits ERK pathway activation and cellular
proliferation induced by RAS.
- term:
id: GO:0043524
label: negative regulation of neuron apoptotic process
evidence_type: IGI
original_reference_id: PMID:22956852
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22956852
supporting_text: Integration of β-catenin, sirtuin, and FOXO signaling
protects from mutant huntingtin toxicity.
- term:
id: GO:0043588
label: skin development
evidence_type: IMP
original_reference_id: PMID:19718027
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19718027
supporting_text: Tcf3 and Tcf4 are essential for long-term homeostasis
of skin epithelia.
- term:
id: GO:0045453
label: bone resorption
evidence_type: IMP
original_reference_id: PMID:15866165
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0045453
label: bone resorption
evidence_type: IGI
original_reference_id: PMID:15866165
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0045595
label: regulation of cell differentiation
evidence_type: IDA
original_reference_id: PMID:12717450
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12717450
supporting_text: A role for Wnt signalling in self-renewal of
haematopoietic stem cells.
- term:
id: GO:0045596
label: negative regulation of cell differentiation
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
- term:
id: GO:0045596
label: negative regulation of cell differentiation
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16102745
supporting_text: 'The duality of beta-catenin function: a requirement in
lens morphogenesis and signaling suppression of lens fate in periocular
ectoderm.'
- term:
id: GO:0045603
label: positive regulation of endothelial cell differentiation
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0045667
label: regulation of osteoblast differentiation
evidence_type: IMP
original_reference_id: PMID:15576404
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15576404
supporting_text: Sequential roles of Hedgehog and Wnt signaling in
osteoblast development.
- term:
id: GO:0045667
label: regulation of osteoblast differentiation
evidence_type: IMP
original_reference_id: PMID:15802266
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15802266
supporting_text: 2005 Mar 31. Essential role of beta-catenin in
postnatal bone acquisition.
- term:
id: GO:0045669
label: positive regulation of osteoblast differentiation
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
- term:
id: GO:0045670
label: regulation of osteoclast differentiation
evidence_type: IMP
original_reference_id: PMID:15802266
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15802266
supporting_text: 2005 Mar 31. Essential role of beta-catenin in
postnatal bone acquisition.
- term:
id: GO:0045671
label: negative regulation of osteoclast differentiation
evidence_type: IMP
original_reference_id: PMID:15866165
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0045743
label: positive regulation of fibroblast growth factor receptor signaling
pathway
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0045743
label: positive regulation of fibroblast growth factor receptor signaling
pathway
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:12551949
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12551949
supporting_text: 2003 Jan 27. Lymphoid enhancer factor-1 and
beta-catenin inhibit Runx2-dependent transcriptional activation of
the osteocalcin promoter.
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:10631168
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10631168
supporting_text: Hippocampus development and generation of dentate
gyrus granule cells is regulated by LEF1.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:12551949
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12551949
supporting_text: 2003 Jan 27. Lymphoid enhancer factor-1 and
beta-catenin inhibit Runx2-dependent transcriptional activation of
the osteocalcin promoter.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:15866163
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:16936075
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16936075
supporting_text: The Wnt/beta-catenin pathway regulates Gli-mediated
Myf5 expression during somitogenesis.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:17767158
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17767158
supporting_text: Modulation of morphogenesis by noncanonical Wnt
signaling requires ATF/CREB family-mediated transcriptional
activation of TGFbeta2.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:19056892
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19056892
supporting_text: A functional link between Wnt signaling and
SKP2-independent p27 turnover in mammary tumors.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:15024079
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15024079
supporting_text: Brn-2 expression controls melanoma proliferation and
is directly regulated by beta-catenin.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IGI
original_reference_id: PMID:15729346
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15729346
supporting_text: Pax3 functions at a nodal point in melanocyte stem
cell differentiation.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IGI
original_reference_id: PMID:15778706
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15778706
supporting_text: Wnt signalling induces maturation of Paneth cells in
intestinal crypts.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:15907834
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15907834
supporting_text: Wnt/beta-catenin signaling acts upstream of N-myc,
BMP4, and FGF signaling to regulate proximal-distal patterning in
the lung.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IGI
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:19620969
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19620969
supporting_text: A regulatory pathway involving
Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:20159597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20159597
supporting_text: Characterization and in vivo pharmacological rescue
of a Wnt2-Gata6 pathway required for cardiac inflow tract
development.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:20627076
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20627076
supporting_text: The Wnt/beta-catenin pathway modulates vascular
remodeling and specification by upregulating Dll4/Notch signaling.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:21750544
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21750544
supporting_text: The Wnt3a/β-catenin target gene Mesogenin1 controls
the segmentation clock by activating a Notch signalling program.
- term:
id: GO:0048469
label: cell maturation
evidence_type: IMP
original_reference_id: PMID:15576404
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15576404
supporting_text: Sequential roles of Hedgehog and Wnt signaling in
osteoblast development.
- term:
id: GO:0048469
label: cell maturation
evidence_type: IDA
original_reference_id: PMID:17706960
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17706960
supporting_text: 2007 Jul 24. Persistent expression of stabilized
beta-catenin delays maturation of radial glial cells into
intermediate progenitors.
- term:
id: GO:0048489
label: synaptic vesicle transport
evidence_type: IMP
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0048513
label: animal organ development
evidence_type: IMP
original_reference_id: PMID:18635608
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18635608
supporting_text: Tissue-specific requirements of beta-catenin in
external genitalia development.
- term:
id: GO:0048538
label: thymus development
evidence_type: IMP
original_reference_id: PMID:16025118
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16025118
supporting_text: Loss of adenomatous polyposis coli gene function
disrupts thymic development.
- term:
id: GO:0048599
label: oocyte development
evidence_type: IGI
original_reference_id: PMID:20454446
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
- term:
id: GO:0048617
label: embryonic foregut morphogenesis
evidence_type: IMP
original_reference_id: PMID:18692041
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18692041
supporting_text: '2008 Jul 26. Bmp4 is required for tracheal formation:
a novel mouse model for tracheal agenesis.'
- term:
id: GO:0048715
label: negative regulation of oligodendrocyte differentiation
evidence_type: IMP
original_reference_id: PMID:19503085
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19503085
supporting_text: HDAC1 and HDAC2 regulate oligodendrocyte
differentiation by disrupting the beta-catenin-TCF interaction.
- term:
id: GO:0050808
label: synapse organization
evidence_type: IMP
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0051145
label: smooth muscle cell differentiation
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0060066
label: oviduct development
evidence_type: IMP
original_reference_id: PMID:17532316
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17532316
supporting_text: 2007 May 3. Essential roles of mesenchyme-derived
beta-catenin in mouse Müllerian duct morphogenesis.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:12235125
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12235125
supporting_text: Sep 16. Beta-catenin-induced melanoma growth requires
the downstream target Microphthalmia-associated transcription
factor.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:12464179
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:12717450
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12717450
supporting_text: A role for Wnt signalling in self-renewal of
haematopoietic stem cells.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:15781477
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15781477
supporting_text: Mar 21. Sox2 induction by FGF and FGFR2 activating
mutations inhibits Wnt signaling and osteoblast differentiation.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IGI
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IGI
original_reference_id: PMID:16818445
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16818445
supporting_text: Wnt9a signaling is required for joint integrity and
regulation of Ihh during chondrogenesis.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:19060336
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19060336
supporting_text: A Wnt7b-dependent pathway regulates the orientation
of epithelial cell division and establishes the cortico-medullary
axis of the mammalian kidney.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:19619491
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IGI
original_reference_id: PMID:19686689
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19686689
supporting_text: Wnt2/2b and beta-catenin signaling are necessary and
sufficient to specify lung progenitors in the foregut.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:19690384
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IGI
original_reference_id: PMID:20454446
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:31222549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:31222549
supporting_text: Epub 2019 Jun 20. The Shisa3 knockout mouse exhibits
normal bone phenotype.
- term:
id: GO:0060173
label: limb development
evidence_type: IMP
original_reference_id: PMID:12569130
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12569130
supporting_text: Ectodermal Wnt3/beta-catenin signaling is required
for the establishment and maintenance of the apical ectodermal
ridge.
- term:
id: GO:0060439
label: trachea morphogenesis
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0060439
label: trachea morphogenesis
evidence_type: IMP
original_reference_id: PMID:18692041
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18692041
supporting_text: '2008 Jul 26. Bmp4 is required for tracheal formation:
a novel mouse model for tracheal agenesis.'
- term:
id: GO:0060440
label: trachea formation
evidence_type: IMP
original_reference_id: PMID:19805295
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19805295
supporting_text: beta-Catenin promotes respiratory progenitor identity
in mouse foregut.
- term:
id: GO:0060441
label: epithelial tube branching involved in lung morphogenesis
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0060479
label: lung cell differentiation
evidence_type: IMP
original_reference_id: PMID:19805295
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19805295
supporting_text: beta-Catenin promotes respiratory progenitor identity
in mouse foregut.
- term:
id: GO:0060484
label: lung-associated mesenchyme development
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
- term:
id: GO:0060492
label: lung induction
evidence_type: IMP
original_reference_id: PMID:19686689
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19686689
supporting_text: Wnt2/2b and beta-catenin signaling are necessary and
sufficient to specify lung progenitors in the foregut.
- term:
id: GO:0060492
label: lung induction
evidence_type: IMP
original_reference_id: PMID:19805295
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19805295
supporting_text: beta-Catenin promotes respiratory progenitor identity
in mouse foregut.
- term:
id: GO:0060742
label: epithelial cell differentiation involved in prostate gland
development
evidence_type: IMP
original_reference_id: PMID:12813461
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12813461
supporting_text: Activation of beta-catenin in prostate epithelium
induces hyperplasias and squamous transdifferentiation.
- term:
id: GO:0060769
label: positive regulation of epithelial cell proliferation involved in
prostate gland development
evidence_type: IMP
original_reference_id: PMID:12813461
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12813461
supporting_text: Activation of beta-catenin in prostate epithelium
induces hyperplasias and squamous transdifferentiation.
- term:
id: GO:0060789
label: hair follicle placode formation
evidence_type: IMP
original_reference_id: PMID:11371349
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11371349
supporting_text: beta-Catenin controls hair follicle morphogenesis and
stem cell differentiation in the skin.
- term:
id: GO:0060789
label: hair follicle placode formation
evidence_type: IGI
original_reference_id: PMID:19619491
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction.
- term:
id: GO:0060916
label: mesenchymal cell proliferation involved in lung development
evidence_type: IMP
original_reference_id: PMID:17128274
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17128274
supporting_text: Wnt-beta-catenin signaling initiates taste papilla
development.
- term:
id: GO:0060916
label: mesenchymal cell proliferation involved in lung development
evidence_type: IMP
original_reference_id: PMID:18231602
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18231602
supporting_text: Formation and differentiation of multiple mesenchymal
lineages during lung development is regulated by beta-catenin
signaling.
- term:
id: GO:0061047
label: positive regulation of branching involved in lung morphogenesis
evidence_type: IMP
original_reference_id: PMID:18533146
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18533146
supporting_text: 2008 Jun 3. An FGF-WNT gene regulatory network
controls lung mesenchyme development.
- term:
id: GO:0061198
label: fungiform papilla formation
evidence_type: IMP
original_reference_id: PMID:17128274
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17128274
supporting_text: Wnt-beta-catenin signaling initiates taste papilla
development.
- term:
id: GO:0072033
label: renal vesicle formation
evidence_type: IMP
original_reference_id: PMID:17537789
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17537789
supporting_text: Wnt/beta-catenin signaling regulates nephron
induction during mouse kidney development.
- term:
id: GO:0072053
label: renal inner medulla development
evidence_type: IMP
original_reference_id: PMID:19060336
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19060336
supporting_text: A Wnt7b-dependent pathway regulates the orientation
of epithelial cell division and establishes the cortico-medullary
axis of the mammalian kidney.
- term:
id: GO:0072054
label: renal outer medulla development
evidence_type: IMP
original_reference_id: PMID:19060336
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19060336
supporting_text: A Wnt7b-dependent pathway regulates the orientation
of epithelial cell division and establishes the cortico-medullary
axis of the mammalian kidney.
- term:
id: GO:0072079
label: nephron tubule formation
evidence_type: IMP
original_reference_id: PMID:17537789
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17537789
supporting_text: Wnt/beta-catenin signaling regulates nephron
induction during mouse kidney development.
- term:
id: GO:0098609
label: cell-cell adhesion
evidence_type: IMP
original_reference_id: PMID:16102745
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16102745
supporting_text: 'The duality of beta-catenin function: a requirement in
lens morphogenesis and signaling suppression of lens fate in periocular
ectoderm.'
- term:
id: GO:2000017
label: positive regulation of determination of dorsal identity
evidence_type: IDA
original_reference_id: PMID:18316368
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18316368
supporting_text: 2008 Mar 3. Protein encoded by the Axin(Fu) allele
effectively down-regulates Wnt signaling but exerts a dominant
negative effect on c-Jun N-terminal kinase signaling.
- term:
id: GO:2001234
label: negative regulation of apoptotic signaling pathway
evidence_type: IMP
original_reference_id: PMID:15131783
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15131783
supporting_text: 'Inducible Cre-mediated control of gene expression in the
murine gastrointestinal tract: effect of loss of beta-catenin.'
- term:
id: GO:2001234
label: negative regulation of apoptotic signaling pathway
evidence_type: IMP
original_reference_id: PMID:20454446
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
- term:
id: GO:2001234
label: negative regulation of apoptotic signaling pathway
evidence_type: IGI
original_reference_id: PMID:20454446
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20454446
supporting_text: WNT4/beta-catenin pathway maintains female germ cell
survival by inhibiting activin betaB in the mouse fetal ovary.
- term:
id: GO:0003676
label: nucleic acid binding
evidence_type: EXP
original_reference_id: PMID:21075118
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21075118
supporting_text: 2010 Nov 12. Biochemical and structural
characterization of β-catenin interactions with nonphosphorylated
and CK2-phosphorylated Lef-1.
- term:
id: GO:0001221
label: transcription coregulator binding
evidence_type: IPI
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Essential location for beta-catenin's transcriptional
co-activator function in canonical Wnt signaling. Nuclear localization
allows beta-catenin to partner with TCF/LEF transcription factors to
drive expression of Wnt target genes.
action: ACCEPT
reason: Nuclear localization is fundamental to beta-catenin's second core
function as a transcriptional regulator in the Wnt signaling pathway.
- term:
id: GO:0098609
label: cell-cell adhesion
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016922
label: nuclear receptor binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019903
label: protein phosphatase binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005912
label: adherens junction
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Essential location for beta-catenin's cell adhesion function. At
adherens junctions, beta-catenin links E-cadherin to alpha-catenin and
the actin cytoskeleton, maintaining epithelial integrity and cell-cell
adhesion.
action: ACCEPT
reason: Adherens junction localization is one of beta-catenin's two core
functions, essential for its structural role in cell adhesion and
epithelial architecture.
- term:
id: GO:0016342
label: catenin complex
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0000922
label: spindle pole
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005813
label: centrosome
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005856
label: cytoskeleton
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005912
label: adherens junction
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007155
label: cell adhesion
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007399
label: nervous system development
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016020
label: membrane
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016055
label: Wnt signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045202
label: synapse
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045216
label: cell-cell junction organization
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070161
label: anchoring junction
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10481074
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10481074
supporting_text: A GSK3-binding peptide from FRAT1 selectively
inhibits the GSK3-catalysed phosphorylation of axin and
beta-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10873669
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10873669
supporting_text: Identification of a novel beta-catenin-interacting
protein.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10882138
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10882138
supporting_text: Structure of the dimerization and
beta-catenin-binding region of alpha-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11348595
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11348595
supporting_text: The structure of the beta-catenin/E-cadherin complex
and the molecular basis of diverse ligand recognition by
beta-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12408825
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12408825
supporting_text: ICAT inhibits beta-catenin binding to Tcf/Lef-family
transcription factors and the general coactivator p300 using
independent structural modules.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12421363
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12421363
supporting_text: Axin negatively affects tau phosphorylation by
glycogen synthase kinase 3beta.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12874278
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12874278
supporting_text: 2003 Jul 21. The PDZ protein tax-interacting
protein-1 inhibits beta-catenin transcriptional activity and growth
of colorectal cancer cells.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:14691142
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14691142
supporting_text: alpha3beta1 integrin-CD151, a component of the
cadherin-catenin complex, regulates PTPmu expression and cell-cell
adhesion.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15327768
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15327768
supporting_text: Mechanism of phosphorylation-dependent binding of APC
to beta-catenin and its role in beta-catenin degradation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16293619
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16293619
supporting_text: '2005 Nov 17. Thermodynamics of beta-catenin-ligand interactions:
the roles of the N- and C-terminal tails in modulating binding affinity.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19107203
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19107203
supporting_text: Direct inhibition of GSK3beta by the phosphorylated
cytoplasmic domain of LRP6 in Wnt/beta-catenin signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20531388
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20531388
supporting_text: Mutant huntingtin-impaired degradation of
beta-catenin causes neurotoxicity in Huntington's disease.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20837657
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20837657
supporting_text: Abelson family kinases regulate Frizzled planar cell
polarity signaling via Dsh phosphorylation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21103407
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21103407
supporting_text: The leukemia-associated Mllt10/Af10-Dot1l are
Tcf4/β-catenin coactivators essential for intestinal homeostasis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21552260
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21552260
supporting_text: May 8. Nemo kinase phosphorylates β-catenin to
promote ommatidial rotation and connects core PCP factors to
E-cadherin-β-catenin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21730140
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21730140
supporting_text: Ezrin-mediated apical integrity is required for
intestinal homeostasis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21751375
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21751375
supporting_text: Aug 1. Functional analysis of novel phosphorylation
sites of CREB-binding protein using mass spectrometry and mammalian
two-hybrid assays.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23273993
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23273993
supporting_text: Dec 27. Intestinal tumorigenesis initiated by
dedifferentiation and acquisition of stem-cell-like properties.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25873176
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25873176
supporting_text: TGIF governs a feed-forward network that empowers Wnt
signaling to drive mammary tumorigenesis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26893351
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26893351
supporting_text: The transcription factor SOX6 contributes to the
developmental origins of obesity by promoting adipogenesis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9264463
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9264463
supporting_text: A specific domain in alpha-catenin mediates binding
to beta-catenin or plakoglobin.
- term:
id: GO:0000209
label: protein polyubiquitination
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0000791
label: euchromatin
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0001649
label: osteoblast differentiation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005102
label: signaling receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005813
label: centrosome
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005912
label: adherens junction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005912
label: adherens junction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005929
label: cilium
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005938
label: cell cortex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007155
label: cell adhesion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007173
label: epidermal growth factor receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0008285
label: negative regulation of cell population proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010629
label: negative regulation of gene expression
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010717
label: regulation of epithelial to mesenchymal transition
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010718
label: positive regulation of epithelial to mesenchymal transition
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010909
label: positive regulation of heparan sulfate proteoglycan biosynthetic
process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0014010
label: Schwann cell proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0014704
label: intercalated disc
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016020
label: membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016324
label: apical plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016342
label: catenin complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016922
label: nuclear receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019899
label: enzyme binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019900
label: kinase binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019902
label: phosphatase binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030054
label: cell junction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030331
label: nuclear estrogen receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030997
label: regulation of centriole-centriole cohesion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031396
label: regulation of protein ubiquitination
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031625
label: ubiquitin protein ligase binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031965
label: nuclear membrane
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032355
label: response to estradiol
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032993
label: protein-DNA complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0033234
label: negative regulation of protein sumoylation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034097
label: response to cytokine
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034112
label: positive regulation of homotypic cell-cell adhesion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034333
label: adherens junction assembly
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034394
label: protein localization to cell surface
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0035255
label: ionotropic glutamate receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0036064
label: ciliary basal body
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043065
label: positive regulation of apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043198
label: dendritic shaft
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043525
label: positive regulation of neuron apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043627
label: response to estrogen
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0044325
label: transmembrane transporter binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0044331
label: cell-cell adhesion mediated by cadherin
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0044877
label: protein-containing complex binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045296
label: cadherin binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0046332
label: SMAD binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048660
label: regulation of smooth muscle cell proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0050998
label: nitric-oxide synthase binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060231
label: mesenchymal to epithelial transition
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061154
label: endothelial tube morphogenesis
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061629
label: RNA polymerase II-specific DNA-binding transcription factor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070097
label: delta-catenin binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070160
label: tight junction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070369
label: beta-catenin-TCF7L2 complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070602
label: regulation of centromeric sister chromatid cohesion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071260
label: cellular response to mechanical stimulus
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071363
label: cellular response to growth factor stimulus
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071681
label: cellular response to indole-3-methanol
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071944
label: cell periphery
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0072497
label: mesenchymal stem cell differentiation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0090279
label: regulation of calcium ion import
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098609
label: cell-cell adhesion
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0140297
label: DNA-binding transcription factor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1905555
label: positive regulation of blood vessel branching
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1990138
label: neuron projection extension
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1990314
label: cellular response to insulin-like growth factor stimulus
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1990907
label: beta-catenin-TCF complex
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:2000008
label: regulation of protein localization to cell surface
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0000209
label: protein polyubiquitination
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0000791
label: euchromatin
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0001649
label: osteoblast differentiation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005102
label: signaling receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005829
label: cytosol
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005929
label: cilium
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005938
label: cell cortex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007173
label: epidermal growth factor receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0008285
label: negative regulation of cell population proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0009410
label: response to xenobiotic stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010717
label: regulation of epithelial to mesenchymal transition
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010718
label: positive regulation of epithelial to mesenchymal transition
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010909
label: positive regulation of heparan sulfate proteoglycan biosynthetic
process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016342
label: catenin complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016922
label: nuclear receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019900
label: kinase binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0019902
label: phosphatase binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030054
label: cell junction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030331
label: nuclear estrogen receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030997
label: regulation of centriole-centriole cohesion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0031396
label: regulation of protein ubiquitination
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032355
label: response to estradiol
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032993
label: protein-DNA complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0033234
label: negative regulation of protein sumoylation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034112
label: positive regulation of homotypic cell-cell adhesion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034333
label: adherens junction assembly
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034394
label: protein localization to cell surface
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0036064
label: ciliary basal body
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043065
label: positive regulation of apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043525
label: positive regulation of neuron apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0044325
label: transmembrane transporter binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0044331
label: cell-cell adhesion mediated by cadherin
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045892
label: negative regulation of DNA-templated transcription
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0046332
label: SMAD binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048660
label: regulation of smooth muscle cell proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060231
label: mesenchymal to epithelial transition
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061154
label: endothelial tube morphogenesis
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061629
label: RNA polymerase II-specific DNA-binding transcription factor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070369
label: beta-catenin-TCF7L2 complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070411
label: I-SMAD binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070602
label: regulation of centromeric sister chromatid cohesion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071363
label: cellular response to growth factor stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071681
label: cellular response to indole-3-methanol
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071944
label: cell periphery
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0072497
label: mesenchymal stem cell differentiation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0090279
label: regulation of calcium ion import
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0140297
label: DNA-binding transcription factor binding
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1905555
label: positive regulation of blood vessel branching
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1990138
label: neuron projection extension
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:1990907
label: beta-catenin-TCF complex
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:2000008
label: regulation of protein localization to cell surface
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:12408825
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12408825
supporting_text: ICAT inhibits beta-catenin binding to Tcf/Lef-family
transcription factors and the general coactivator p300 using
independent structural modules.
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:10898789
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10898789
supporting_text: Inhibition of Wnt signaling by ICAT, a novel
beta-catenin-interacting protein.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16936075
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16936075
supporting_text: The Wnt/beta-catenin pathway regulates Gli-mediated
Myf5 expression during somitogenesis.
- term:
id: GO:0045597
label: positive regulation of cell differentiation
evidence_type: NAS
original_reference_id: PMID:24847765
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24847765
supporting_text: From inception to output, Tcf1 and Lef1 safeguard
development of T cells and innate immune cells.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:16936075
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16936075
supporting_text: The Wnt/beta-catenin pathway regulates Gli-mediated
Myf5 expression during somitogenesis.
- term:
id: GO:0050767
label: regulation of neurogenesis
evidence_type: NAS
original_reference_id: PMID:23377854
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23377854
supporting_text: 2013 Feb 2. Physiological role of β-catenin/TCF
signaling in neurons of the adult brain.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:16936075
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16936075
supporting_text: The Wnt/beta-catenin pathway regulates Gli-mediated
Myf5 expression during somitogenesis.
- term:
id: GO:0090090
label: negative regulation of canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:10898789
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10898789
supporting_text: Inhibition of Wnt signaling by ICAT, a novel
beta-catenin-interacting protein.
- term:
id: GO:0090575
label: RNA polymerase II transcription regulator complex
evidence_type: IPI
original_reference_id: PMID:21075118
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21075118
supporting_text: 2010 Nov 12. Biochemical and structural
characterization of β-catenin interactions with nonphosphorylated
and CK2-phosphorylated Lef-1.
- term:
id: GO:1990711
label: beta-catenin-ICAT complex
evidence_type: IPI
original_reference_id: PMID:10898789
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10898789
supporting_text: Inhibition of Wnt signaling by ICAT, a novel
beta-catenin-interacting protein.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:12494996
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12494996
supporting_text: Loss of desmoglein 2 suggests essential functions for
early embryonic development and proliferation of embryonal stem
cells.
- term:
id: GO:0010717
label: regulation of epithelial to mesenchymal transition
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0060231
label: mesenchymal to epithelial transition
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:1990226
label: histone methyltransferase binding
evidence_type: IPI
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:27375112
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27375112
supporting_text: Epub 2016 Jun 29. Antagonistic Regulation of
Intercellular Cohesion by Plakophilins 1 and 3.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:27375112
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27375112
supporting_text: Epub 2016 Jun 29. Antagonistic Regulation of
Intercellular Cohesion by Plakophilins 1 and 3.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:27015268
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27015268
supporting_text: eCollection 2016. Plakophilin-1, a Novel Wnt
Signaling Regulator, Is Critical for Tooth Development and
Ameloblast Differentiation.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:27015268
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27015268
supporting_text: eCollection 2016. Plakophilin-1, a Novel Wnt
Signaling Regulator, Is Critical for Tooth Development and
Ameloblast Differentiation.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:27015268
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:27015268
supporting_text: eCollection 2016. Plakophilin-1, a Novel Wnt
Signaling Regulator, Is Critical for Tooth Development and
Ameloblast Differentiation.
- term:
id: GO:0042734
label: presynaptic membrane
evidence_type: IDA
original_reference_id: PMID:8909549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8909549
supporting_text: The catenin/cadherin adhesion system is localized in
synaptic junctions bordering transmitter release zones.
- term:
id: GO:0045211
label: postsynaptic membrane
evidence_type: IDA
original_reference_id: PMID:8909549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8909549
supporting_text: The catenin/cadherin adhesion system is localized in
synaptic junctions bordering transmitter release zones.
- term:
id: GO:0051963
label: regulation of synapse assembly
evidence_type: IMP
original_reference_id: PMID:28641114
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:28641114
supporting_text: A Critical Role of Presynaptic
Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and
Functional Synapses in the Neocortex.
- term:
id: GO:0051963
label: regulation of synapse assembly
evidence_type: IDA
original_reference_id: PMID:28641114
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:28641114
supporting_text: A Critical Role of Presynaptic
Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and
Functional Synapses in the Neocortex.
- term:
id: GO:0097091
label: synaptic vesicle clustering
evidence_type: IMP
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0097091
label: synaptic vesicle clustering
evidence_type: IDA
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0098685
label: Schaffer collateral - CA1 synapse
evidence_type: IMP
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0098685
label: Schaffer collateral - CA1 synapse
evidence_type: IDA
original_reference_id: PMID:14622577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14622577
supporting_text: Role of beta-catenin in synaptic vesicle localization
and presynaptic assembly.
- term:
id: GO:0098831
label: presynaptic active zone cytoplasmic component
evidence_type: IDA
original_reference_id: PMID:8909549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8909549
supporting_text: The catenin/cadherin adhesion system is localized in
synaptic junctions bordering transmitter release zones.
- term:
id: GO:0098978
label: glutamatergic synapse
evidence_type: IMP
original_reference_id: PMID:28641114
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:28641114
supporting_text: A Critical Role of Presynaptic
Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and
Functional Synapses in the Neocortex.
- term:
id: GO:0098978
label: glutamatergic synapse
evidence_type: IDA
original_reference_id: PMID:28641114
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:28641114
supporting_text: A Critical Role of Presynaptic
Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and
Functional Synapses in the Neocortex.
- term:
id: GO:0099092
label: postsynaptic density, intracellular component
evidence_type: IDA
original_reference_id: PMID:8909549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8909549
supporting_text: The catenin/cadherin adhesion system is localized in
synaptic junctions bordering transmitter release zones.
- term:
id: GO:0048568
label: embryonic organ development
evidence_type: IMP
original_reference_id: PMID:30478225
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30478225
supporting_text: TBX2 and TBX3 act downstream of canonical WNT
signaling in patterning and differentiation of the mouse ureteric
mesenchyme.
- term:
id: GO:0072497
label: mesenchymal stem cell differentiation
evidence_type: IMP
original_reference_id: PMID:30478225
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30478225
supporting_text: TBX2 and TBX3 act downstream of canonical WNT
signaling in patterning and differentiation of the mouse ureteric
mesenchyme.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:15905404
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15905404
supporting_text: Functional interaction between beta-catenin and FOXO
in oxidative stress signaling.
- term:
id: GO:0036520
label: astrocyte-dopaminergic neuron signaling
evidence_type: IMP
original_reference_id: PMID:21752258
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21752258
supporting_text: 'A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway
as a candidate regulatory circuit controlling mesencephalic dopaminergic
neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival
and neuroprotection.'
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:19122665
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19122665
supporting_text: Wnt antagonism of Shh facilitates midbrain floor
plate neurogenesis.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:21752258
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21752258
supporting_text: 'A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway
as a candidate regulatory circuit controlling mesencephalic dopaminergic
neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival
and neuroprotection.'
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0003151
label: outflow tract morphogenesis
evidence_type: IMP
original_reference_id: PMID:12464179
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development.
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: IMP
original_reference_id: PMID:12464179
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development.
- term:
id: GO:1901331
label: positive regulation of odontoblast differentiation
evidence_type: IMP
original_reference_id: PMID:29148101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:29148101
supporting_text: Homeobox protein MSX-1 inhibits expression of bone
morphogenetic protein 2, bone morphogenetic protein 4, and lymphoid
enhancer-binding factor 1 via Wnt/β-catenin signaling to prevent
differentiation of dental mesenchymal cells during the late bell
stage.
- term:
id: GO:1903377
label: negative regulation of oxidative stress-induced neuron intrinsic
apoptotic signaling pathway
evidence_type: IMP
original_reference_id: PMID:21752258
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21752258
supporting_text: 'A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway
as a candidate regulatory circuit controlling mesencephalic dopaminergic
neuron-astrocyte crosstalk: Therapeutical relevance for neuron survival
and neuroprotection.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32533114
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:32533114
supporting_text: ADNP promotes neural differentiation by modulating
Wnt/β-catenin signaling.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:16818445
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16818445
supporting_text: Wnt9a signaling is required for joint integrity and
regulation of Ihh during chondrogenesis.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:17767158
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17767158
supporting_text: Modulation of morphogenesis by noncanonical Wnt
signaling requires ATF/CREB family-mediated transcriptional
activation of TGFbeta2.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:19619491
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:19620969
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19620969
supporting_text: A regulatory pathway involving
Notch1/beta-catenin/Isl1 determines cardiac progenitor cell fate.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:19690384
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19690384
supporting_text: Wnt signaling regulates smooth muscle precursor
development in the mouse lung via a tenascin C/PDGFR pathway.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:20159597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20159597
supporting_text: Characterization and in vivo pharmacological rescue
of a Wnt2-Gata6 pathway required for cardiac inflow tract
development.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:21350016
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21350016
supporting_text: Canonical Wnt9b signaling balances progenitor cell
expansion and differentiation during kidney development.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:21512031
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21512031
supporting_text: Hippo pathway inhibits Wnt signaling to restrain
cardiomyocyte proliferation and heart size.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IGI
original_reference_id: PMID:23824574
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23824574
supporting_text: Wnt/β-catenin signalling regulates Sox17 expression
and is essential for organizer and endoderm formation in the mouse.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:12235125
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12235125
supporting_text: Sep 16. Beta-catenin-induced melanoma growth requires
the downstream target Microphthalmia-associated transcription
factor.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:12464179
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:19056892
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19056892
supporting_text: A functional link between Wnt signaling and
SKP2-independent p27 turnover in mammary tumors.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IMP
original_reference_id: PMID:19619491
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19619491
supporting_text: Reciprocal requirements for EDA/EDAR/NF-kappaB and
Wnt/beta-catenin signaling pathways in hair follicle induction.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10318824
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10318824
supporting_text: Functional domains of axin.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11104755
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11104755
supporting_text: 2000 Dec 4. Substitution of a glycogen synthase
kinase-3beta phosphorylation site in presenilin 1 separates
presenilin function from beta-catenin signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12432063
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12432063
supporting_text: Protein kinase CKII regulates the interaction of
beta-catenin with alpha-catenin and its protein stability.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12695331
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12695331
supporting_text: NF2 deficiency promotes tumorigenesis and metastasis
by destabilizing adherens junctions.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12861022
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12861022
supporting_text: T-cell factor 4N (TCF-4N), a novel isoform of mouse
TCF-4, synergizes with beta-catenin to coactivate C/EBPalpha and
steroidogenic factor 1 transcription factors.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:14647292
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14647292
supporting_text: Mammalian formin-1 participates in adherens junctions
and polymerization of linear actin cables.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:14960280
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14960280
supporting_text: Ozz-E3, a muscle-specific ubiquitin ligase, regulates
beta-catenin degradation during myogenesis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15574752
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15574752
supporting_text: Role of a BCL9-related beta-catenin-binding protein,
B9L, in tumorigenesis induced by aberrant activation of Wnt
signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15781477
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15781477
supporting_text: Mar 21. Sox2 induction by FGF and FGFR2 activating
mutations inhibits Wnt signaling and osteoblast differentiation.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15834408
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15834408
supporting_text: The KIF3 motor transports N-cadherin and organizes
the developing neuroepithelium.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16368433
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16368433
supporting_text: Deficient E-cadherin adhesion in C57BL/6J-Min/+ mice
is associated with increased tyrosine kinase activity and
RhoA-dependent actomyosin contractility.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17535849
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17535849
supporting_text: May 29. A unique and specific interaction between
alphaT-catenin and plakophilin-2 in the area composita, the
mixed-type junctional structure of cardiac intercalated discs.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18202148
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18202148
supporting_text: Jan 17. Cooperative control via lymphoid enhancer
factor 1/T cell factor 3 and estrogen receptor-alpha for uterine
gene regulation by estrogen.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18632848
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18632848
supporting_text: SUMOylation target sites at the C terminus protect
Axin from ubiquitination and confer protein stability.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19503085
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19503085
supporting_text: HDAC1 and HDAC2 regulate oligodendrocyte
differentiation by disrupting the beta-catenin-TCF interaction.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19725955
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19725955
supporting_text: Arginine methyltransferase CARM1/PRMT4 regulates
endochondral ossification.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21512031
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21512031
supporting_text: Hippo pathway inhibits Wnt signaling to restrain
cardiomyocyte proliferation and heart size.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:22665494
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22665494
supporting_text: Jun 4. mrhl RNA, a long noncoding RNA, negatively
regulates Wnt signaling through its protein partner Ddx5/p68 in
mouse spermatogonial cells.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26787558
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26787558
supporting_text: SPECC1L deficiency results in increased adherens
junction stability and reduced cranial neural crest cell
delamination.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:30659184
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30659184
supporting_text: Hematopoietic PBX-interacting protein mediates
cartilage degeneration during the pathogenesis of osteoarthritis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:8555428
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8555428
supporting_text: Immunotoxicologic effects of ethylene dibromide in
the mouse and their modulation by the estrous cycle.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9488439
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9488439
supporting_text: Two members of the Tcf family implicated in
Wnt/beta-catenin signaling during embryogenesis in the mouse.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:9554852
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9554852
supporting_text: Functional interaction of an axin homolog, conductin,
with beta-catenin, APC, and GSK3beta.
- term:
id: GO:0005634
label: nucleus
evidence_type: IPI
original_reference_id: PMID:30659184
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30659184
supporting_text: Hematopoietic PBX-interacting protein mediates
cartilage degeneration during the pathogenesis of osteoarthritis.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:11731231
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731231
supporting_text: Dynamic expression and nuclear accumulation of
beta-catenin during the development of hair follicle-derived
structures.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:11731265
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731265
supporting_text: Expression of Tcf/Lef and sFrp and localization of
beta-catenin in the developing mouse lung.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:11872843
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11872843
supporting_text: Colorectal cancer in mice genetically deficient in
the mucin Muc2.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:12874278
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12874278
supporting_text: 2003 Jul 21. The PDZ protein tax-interacting
protein-1 inhibits beta-catenin transcriptional activity and growth
of colorectal cancer cells.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:12885771
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12885771
supporting_text: 2003 Jul 28. beta-Catenin is required for
specification of proximal/distal cell fate during lung
morphogenesis.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:12923052
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12923052
supporting_text: Genetic interaction between Wnt/beta-catenin and BMP
receptor signaling during formation of the AER and the
dorsal-ventral axis in the limb.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15371327
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15371327
supporting_text: Wnt/beta-catenin signaling is sufficient and
necessary for synovial joint formation.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15574752
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15574752
supporting_text: Role of a BCL9-related beta-catenin-binding protein,
B9L, in tumorigenesis induced by aberrant activation of Wnt
signaling.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15778706
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15778706
supporting_text: Wnt signalling induces maturation of Paneth cells in
intestinal crypts.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15866163
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866163
supporting_text: Canonical Wnt/beta-catenin signaling prevents
osteoblasts from differentiating into chondrocytes.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:15866165
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15866165
supporting_text: Canonical Wnt signaling in differentiated osteoblasts
controls osteoclast differentiation.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16439479
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16439479
supporting_text: Foxf1 and Foxf2 control murine gut development by
limiting mesenchymal Wnt signaling and promoting extracellular
matrix production.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16489008
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16489008
supporting_text: Patched1 functions as a gatekeeper by promoting cell
cycle progression.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16678815
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678815
supporting_text: 2006 Apr 3. Lef1 is required for the transition of
Wnt signaling from mesenchymal to epithelial cells in the mouse
embryonic mammary gland.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16858399
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16858399
supporting_text: Jul 20. C3G regulates the size of the cerebral cortex
neural precursor population.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:16989802
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16989802
supporting_text: Jul 7. Levels of mesenchymal FGFR2 signaling modulate
smooth muscle progenitor cell commitment in the lung.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:17128274
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17128274
supporting_text: Wnt-beta-catenin signaling initiates taste papilla
development.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:17560563
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17560563
supporting_text: 2007 May 3. Fgf10 dosage is critical for the
amplification of epithelial cell progenitors and for the formation
of multiple mesenchymal lineages during lung development.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:17596282
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17596282
supporting_text: Unique mechanisms of growth regulation and tumor
suppression upon Apc inactivation in the pancreas.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:17615359
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17615359
supporting_text: Regulation of spontaneous intestinal tumorigenesis
through the adaptor protein MyD88.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:18978355
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18978355
supporting_text: 2008 Oct 31. Overexpression of TEAD-1 in transgenic
mouse striated muscles produces a slower skeletal muscle contractile
phenotype.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:19213727
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19213727
supporting_text: 2009 Feb 12. Wnt11 promotes osteoblast maturation and
mineralization through R-spondin 2.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:19497282
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19497282
supporting_text: Wnt7a activates the planar cell polarity pathway to
drive the symmetric expansion of satellite stem cells.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:19796622
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19796622
supporting_text: Uncovering early response of gene regulatory networks
in ESCs by systematic induction of transcription factors.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:19850029
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19850029
supporting_text: Oct 19. A critical role for sFRP proteins in
maintaining caudal neural tube closure in mice via inhibition of BMP
signaling.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:21991325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21991325
supporting_text: RSPO1/β-catenin signaling pathway regulates oogonia
differentiation and entry into meiosis in the mouse fetal ovary.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:22665494
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22665494
supporting_text: Jun 4. mrhl RNA, a long noncoding RNA, negatively
regulates Wnt signaling through its protein partner Ddx5/p68 in
mouse spermatogonial cells.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:23266329
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23266329
supporting_text: 2012 Dec 22. Kruppel-like factor 5 controls villus
formation and initiation of cytodifferentiation in the embryonic
intestinal epithelium.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:23610556
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23610556
supporting_text: Apr 16. A positive feedback loop involving Gcm1 and
Fzd5 directs chorionic branching morphogenesis in the placenta.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:23740243
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23740243
supporting_text: Epub 2013 Jun 5. Activation of the transcription
factor GLI1 by WNT signaling underlies the role of SULFATASE 2 as a
regulator of tissue regeneration.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:25535395
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25535395
supporting_text: Notch inhibition induces mitotically generated hair
cells in mammalian cochleae via activating the Wnt pathway.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:30659184
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30659184
supporting_text: Hematopoietic PBX-interacting protein mediates
cartilage degeneration during the pathogenesis of osteoarthritis.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:31222549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:31222549
supporting_text: Epub 2019 Jun 20. The Shisa3 knockout mouse exhibits
normal bone phenotype.
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: IDA
original_reference_id: PMID:12464179
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12464179
supporting_text: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2
pathway mediating cell-type-specific proliferation during
development.
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: IDA
original_reference_id: PMID:12861022
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12861022
supporting_text: T-cell factor 4N (TCF-4N), a novel isoform of mouse
TCF-4, synergizes with beta-catenin to coactivate C/EBPalpha and
steroidogenic factor 1 transcription factors.
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: IDA
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IPI
original_reference_id: PMID:30659184
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30659184
supporting_text: Hematopoietic PBX-interacting protein mediates
cartilage degeneration during the pathogenesis of osteoarthritis.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:11731231
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731231
supporting_text: Dynamic expression and nuclear accumulation of
beta-catenin during the development of hair follicle-derived
structures.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:11731265
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731265
supporting_text: Expression of Tcf/Lef and sFrp and localization of
beta-catenin in the developing mouse lung.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:12235125
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12235125
supporting_text: Sep 16. Beta-catenin-induced melanoma growth requires
the downstream target Microphthalmia-associated transcription
factor.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:12923052
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12923052
supporting_text: Genetic interaction between Wnt/beta-catenin and BMP
receptor signaling during formation of the AER and the
dorsal-ventral axis in the limb.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:14981260
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14981260
supporting_text: Nuclear-cytoplasmic shuttling of Axin regulates
subcellular localization of beta-catenin.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:15525667
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15525667
supporting_text: Stabilization of beta-catenin in the mouse zygote
leads to premature epithelial-mesenchymal transition in the
epiblast.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:15574752
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15574752
supporting_text: Role of a BCL9-related beta-catenin-binding protein,
B9L, in tumorigenesis induced by aberrant activation of Wnt
signaling.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:16489008
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16489008
supporting_text: Patched1 functions as a gatekeeper by promoting cell
cycle progression.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:17128274
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17128274
supporting_text: Wnt-beta-catenin signaling initiates taste papilla
development.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:19213727
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19213727
supporting_text: 2009 Feb 12. Wnt11 promotes osteoblast maturation and
mineralization through R-spondin 2.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:30659184
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30659184
supporting_text: Hematopoietic PBX-interacting protein mediates
cartilage degeneration during the pathogenesis of osteoarthritis.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:12055200
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12055200
supporting_text: 2002 Jun 7. Regulation of Wnt signaling during
adipogenesis.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:15673614
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15673614
supporting_text: Jan 26. Wnt10b deficiency promotes coexpression of
myogenic and adipogenic programs in myoblasts.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:12040017
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12040017
supporting_text: 'Mouse mammary epithelial cells express the Na-K-Cl cotransporter,
NKCC1: characterization, localization, and involvement in ductal development
and morphogenesis.'
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:16418220
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16418220
supporting_text: Desmocollin 3 is required for pre-implantation
development of the mouse embryo.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:16740478
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16740478
supporting_text: Apc tumor suppressor gene is the "zonation-keeper" of
mouse liver.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:16858399
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16858399
supporting_text: Jul 20. C3G regulates the size of the cerebral cortex
neural precursor population.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:16962386
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16962386
supporting_text: 'Epub 2006 Jul 27. Tissue, cellular and sub-cellular localization
of the Vangl2 protein during embryonic development: effect of the Lp mutation.'
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:17596282
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17596282
supporting_text: Unique mechanisms of growth regulation and tumor
suppression upon Apc inactivation in the pancreas.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:19966784
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19966784
supporting_text: 2009 Dec 6. Sec24b selectively sorts Vangl2 to
regulate planar cell polarity during neural tube closure.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:23266329
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23266329
supporting_text: 2012 Dec 22. Kruppel-like factor 5 controls villus
formation and initiation of cytodifferentiation in the embryonic
intestinal epithelium.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:8853988
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8853988
supporting_text: Expression and cell membrane localization of catenins
during mouse preimplantation development.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:12181493
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12181493
supporting_text: TCL1 participates in early embryonic development and
is overexpressed in human seminomas.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:14597196
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14597196
supporting_text: Overexpression of Sonic Hedgehog suppresses embryonic
hair follicle morphogenesis.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:18816447
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18816447
supporting_text: 'Diverse roles of E-cadherin in the morphogenesis of the
submandibular gland: insights into the formation of acinar and ductal
structures.'
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: ISO
original_reference_id: PMID:19151727
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19151727
supporting_text: Regulation of cardiovascular development and
integrity by the heart of glass-cerebral cavernous malformation
protein pathway.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:20089884
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20089884
supporting_text: 2010 Jan 20. Milk secretion and ejection are impaired
in the mammary gland of mice harboring a Cx43 mutant while
expression and localization of tight and adherens junction proteins
remain unchanged.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:21377456
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21377456
supporting_text: Mar 4. Grainyhead-like 2 regulates neural tube
closure and adhesion molecule expression during neural fold fusion.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:24191021
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24191021
supporting_text: Sox9 plays multiple roles in the lung epithelium
during branching morphogenesis.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:9950951
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9950951
supporting_text: Nuclear localization of beta-catenin and loss of
apical brush border actin in cystic tubules of bcl-2 -/- mice.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:11731229
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731229
supporting_text: FAM deubiquitylating enzyme is essential for
preimplantation mouse embryo development.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:12203715
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12203715
supporting_text: Localization of the novel Xin protein to the adherens
junction complex in cardiac and skeletal muscle during development.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:12695331
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12695331
supporting_text: NF2 deficiency promotes tumorigenesis and metastasis
by destabilizing adherens junctions.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:14657280
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14657280
supporting_text: 'Dec 2. Lamellipodium extension and cadherin adhesion:
two cell responses to cadherin activation relying on distinct signalling
pathways.'
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:15148305
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15148305
supporting_text: May 17. Mammalian Fat1 cadherin regulates actin
dynamics and cell-cell contact.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:15292239
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15292239
supporting_text: 2004 Aug 2. Defects in cell adhesion and the visceral
endoderm following ablation of nonmuscle myosin heavy chain II-A in
mice.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:15645444
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15645444
supporting_text: Gene expression profile analysis of mouse colon
embryonic development.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:15775979
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15775979
supporting_text: Mar 3. E-cadherin is essential for in vivo epidermal
barrier function by regulating tight junctions.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:16199027
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16199027
supporting_text: 2005 Sep 29. Vezatin, a protein associated to
adherens junctions, is required for mouse blastocyst morphogenesis.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:16892058
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16892058
supporting_text: The Rho-GTPase cdc42 regulates neural progenitor fate
at the apical surface.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:17544522
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17544522
supporting_text: Targeted disruption of the murine large nuclear
KIAA1440/Ints1 protein causes growth arrest in early blastocyst
stage embryos and eventual apoptotic cell death.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:21991385
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21991385
supporting_text: Adhesion protein VSIG1 is required for the proper
differentiation of glandular gastric epithelia.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:23824574
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23824574
supporting_text: Wnt/β-catenin signalling regulates Sox17 expression
and is essential for organizer and endoderm formation in the mouse.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:26787558
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26787558
supporting_text: SPECC1L deficiency results in increased adherens
junction stability and reduced cranial neural crest cell
delamination.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:29211732
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:29211732
supporting_text: eCollection 2017. The mouse Jhy gene regulates
ependymal cell differentiation and ciliogenesis.
- term:
id: GO:0005916
label: fascia adherens
evidence_type: IDA
original_reference_id: PMID:16481394
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16481394
supporting_text: '2006 Feb 15. The transitional junction: a new functional
subcellular domain at the intercalated disc.'
- term:
id: GO:0005923
label: bicellular tight junction
evidence_type: IDA
original_reference_id: PMID:17130295
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17130295
supporting_text: Distinct subdomain organization and molecular
composition of a tight junction with adherens junction features.
- term:
id: GO:0014704
label: intercalated disc
evidence_type: IDA
original_reference_id: PMID:17535849
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17535849
supporting_text: May 29. A unique and specific interaction between
alphaT-catenin and plakophilin-2 in the area composita, the
mixed-type junctional structure of cardiac intercalated discs.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:11731231
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11731231
supporting_text: Dynamic expression and nuclear accumulation of
beta-catenin during the development of hair follicle-derived
structures.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:12055200
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12055200
supporting_text: 2002 Jun 7. Regulation of Wnt signaling during
adipogenesis.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:12432063
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12432063
supporting_text: Protein kinase CKII regulates the interaction of
beta-catenin with alpha-catenin and its protein stability.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:12611902
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12611902
supporting_text: 2003 Feb 27. Regulation of the SHP-2 tyrosine
phosphatase by a novel cholesterol- and cell confluence-dependent
mechanism.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:14657280
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14657280
supporting_text: 'Dec 2. Lamellipodium extension and cadherin adhesion:
two cell responses to cadherin activation relying on distinct signalling
pathways.'
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:15987773
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15987773
supporting_text: Forkhead box A1 regulates prostate ductal
morphogenesis and promotes epithelial cell maturation.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:16364283
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16364283
supporting_text: Dec 20. Hex homeobox gene controls the transition of
the endoderm to a pseudostratified, cell emergent epithelium for
liver bud development.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:21991325
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21991325
supporting_text: RSPO1/β-catenin signaling pathway regulates oogonia
differentiation and entry into meiosis in the mouse fetal ovary.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:22139371
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22139371
supporting_text: Bardet-Biedl syndrome 3 (Bbs3) knockout mouse model
reveals common BBS-associated phenotypes and Bbs3 unique phenotypes.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:8821035
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8821035
supporting_text: Expression of catenins during mouse embryonic
development and in adult tissues.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:12885771
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12885771
supporting_text: 2003 Jul 28. beta-Catenin is required for
specification of proximal/distal cell fate during lung
morphogenesis.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:14625387
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14625387
supporting_text: Foxj1 is required for apical localization of ezrin in
airway epithelial cells.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:15226261
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15226261
supporting_text: Orpk mouse model of polycystic kidney disease reveals
essential role of primary cilia in pancreatic tissue organization.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:17671182
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17671182
supporting_text: Haploinsufficiency of Krüppel-like factor 4 promotes
adenomatous polyposis coli dependent intestinal tumorigenesis.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:20016102
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20016102
supporting_text: The small GTPase Rac1 regulates auditory hair cell
morphogenesis.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:20089884
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20089884
supporting_text: 2010 Jan 20. Milk secretion and ejection are impaired
in the mammary gland of mice harboring a Cx43 mutant while
expression and localization of tight and adherens junction proteins
remain unchanged.
- term:
id: GO:0016323
label: basolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:9950951
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9950951
supporting_text: Nuclear localization of beta-catenin and loss of
apical brush border actin in cystic tubules of bcl-2 -/- mice.
- term:
id: GO:0016327
label: apicolateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:29211732
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:29211732
supporting_text: eCollection 2017. The mouse Jhy gene regulates
ependymal cell differentiation and ciliogenesis.
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: ISO
original_reference_id: GO_REF:0000008
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016328
label: lateral plasma membrane
evidence_type: IDA
original_reference_id: PMID:15645444
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15645444
supporting_text: Gene expression profile analysis of mouse colon
embryonic development.
- term:
id: GO:0016342
label: catenin complex
evidence_type: IDA
original_reference_id: PMID:8853988
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8853988
supporting_text: Expression and cell membrane localization of catenins
during mouse preimplantation development.
- term:
id: GO:0030018
label: Z disc
evidence_type: IDA
original_reference_id: PMID:8821035
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8821035
supporting_text: Expression of catenins during mouse embryonic
development and in adult tissues.
- term:
id: GO:0030027
label: lamellipodium
evidence_type: IDA
original_reference_id: PMID:14657280
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14657280
supporting_text: 'Dec 2. Lamellipodium extension and cadherin adhesion:
two cell responses to cadherin activation relying on distinct signalling
pathways.'
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: IDA
original_reference_id: PMID:10318824
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10318824
supporting_text: Functional domains of axin.
- term:
id: GO:0031253
label: cell projection membrane
evidence_type: IDA
original_reference_id: PMID:16621792
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16621792
supporting_text: 'Epub 2006 Apr 17. Membrane localization of adenomatous
polyposis coli protein at cellular protrusions: targeting sequences and
regulation by beta-catenin.'
- term:
id: GO:0031528
label: microvillus membrane
evidence_type: IDA
original_reference_id: PMID:16439479
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16439479
supporting_text: Foxf1 and Foxf2 control murine gut development by
limiting mesenchymal Wnt signaling and promoting extracellular
matrix production.
- term:
id: GO:0032991
label: protein-containing complex
evidence_type: ISO
original_reference_id: PMID:22083958
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22083958
supporting_text: Histone H1 recruitment by CHD8 is essential for
suppression of the Wnt-β-catenin signaling pathway.
- term:
id: GO:0043296
label: apical junction complex
evidence_type: IDA
original_reference_id: PMID:16249236
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16249236
supporting_text: Oct 25. Shroom regulates epithelial cell shape via
the apical positioning of an actomyosin network.
- term:
id: GO:0043296
label: apical junction complex
evidence_type: IDA
original_reference_id: PMID:17130295
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17130295
supporting_text: Distinct subdomain organization and molecular
composition of a tight junction with adherens junction features.
- term:
id: GO:0043296
label: apical junction complex
evidence_type: IDA
original_reference_id: PMID:17666436
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17666436
supporting_text: Jul 31. Shroom2, a myosin-VIIa- and actin-binding
protein, directly interacts with ZO-1 at tight junctions.
- term:
id: GO:0045177
label: apical part of cell
evidence_type: IDA
original_reference_id: PMID:14758363
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14758363
supporting_text: The hyh mutation uncovers roles for alpha Snap in
apical protein localization and control of neural cell fate.
- term:
id: GO:0045177
label: apical part of cell
evidence_type: IDA
original_reference_id: PMID:15037549
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15037549
supporting_text: Loss of cell polarity causes severe brain dysplasia
in Lgl1 knockout mice.
- term:
id: GO:0045177
label: apical part of cell
evidence_type: IDA
original_reference_id: PMID:16249236
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16249236
supporting_text: Oct 25. Shroom regulates epithelial cell shape via
the apical positioning of an actomyosin network.
- term:
id: GO:0045177
label: apical part of cell
evidence_type: IDA
original_reference_id: PMID:23863479
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23863479
supporting_text: Tumor suppressor Nf2 limits expansion of the neural
progenitor pool by inhibiting Yap/Taz transcriptional coactivators.
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: IDA
original_reference_id: PMID:12432063
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12432063
supporting_text: Protein kinase CKII regulates the interaction of
beta-catenin with alpha-catenin and its protein stability.
- term:
id: GO:0045296
label: cadherin binding
evidence_type: ISO
original_reference_id: PMID:10330403
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10330403
supporting_text: Domains of axin involved in protein-protein
interactions, Wnt pathway inhibition, and intracellular
localization.
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IPI
original_reference_id: PMID:15023525
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15023525
supporting_text: Ksp-cadherin is a functional cell-cell adhesion
molecule related to LI-cadherin.
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IPI
original_reference_id: PMID:15057752
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15057752
supporting_text: Beta-catenin is temporally regulated during normal
liver development.
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IPI
original_reference_id: PMID:8853988
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:8853988
supporting_text: Expression and cell membrane localization of catenins
during mouse preimplantation development.
- term:
id: GO:0061629
label: RNA polymerase II-specific DNA-binding transcription factor binding
evidence_type: IDA
original_reference_id: PMID:16678101
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16678101
supporting_text: Homeodomain-mediated beta-catenin-dependent switching
events dictate cell-lineage determination.
- term:
id: GO:0061629
label: RNA polymerase II-specific DNA-binding transcription factor binding
evidence_type: IDA
original_reference_id: PMID:22665494
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22665494
supporting_text: Jun 4. mrhl RNA, a long noncoding RNA, negatively
regulates Wnt signaling through its protein partner Ddx5/p68 in
mouse spermatogonial cells.
- term:
id: GO:0140677
label: molecular function activator activity
evidence_type: EXP
original_reference_id: PMID:21075118
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21075118
supporting_text: 2010 Nov 12. Biochemical and structural
characterization of β-catenin interactions with nonphosphorylated
and CK2-phosphorylated Lef-1.
- term:
id: GO:0021854
label: hypothalamus development
evidence_type: IMP
original_reference_id: PMID:32868762
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:32868762
supporting_text: The cellular and molecular landscape of hypothalamic
patterning and differentiation from embryonic to late postnatal
development.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:32868762
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:32868762
supporting_text: The cellular and molecular landscape of hypothalamic
patterning and differentiation from embryonic to late postnatal
development.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9773219
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9860515
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9860560
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9860569
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9863577
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005886
label: plasma membrane
evidence_type: TAS
original_reference_id: Reactome:R-NUL-9761463
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:30389919
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30389919
supporting_text: ARTS mediates apoptosis and regeneration of the
intestinal stem cell niche.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:30389919
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30389919
supporting_text: ARTS mediates apoptosis and regeneration of the
intestinal stem cell niche.
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9735211
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9754284
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9793864
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9794042
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9823738
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9824206
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9824277
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9824278
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0140297
label: DNA-binding transcription factor binding
evidence_type: IPI
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0005912
label: adherens junction
evidence_type: IDA
original_reference_id: PMID:20399730
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20399730
supporting_text: The apical complex couples cell fate and cell
survival to cerebral cortical development.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IDA
original_reference_id: PMID:17920587
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17920587
supporting_text: Epub 2007 Sep 7. FERM protein EPB41L5 is a novel
member of the mammalian CRB-MPP5 polarity complex.
- term:
id: GO:1990907
label: beta-catenin-TCF complex
evidence_type: IDA
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:0032968
label: positive regulation of transcription elongation by RNA polymerase
II
evidence_type: IMP
original_reference_id: PMID:30478225
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30478225
supporting_text: TBX2 and TBX3 act downstream of canonical WNT
signaling in patterning and differentiation of the mouse ureteric
mesenchyme.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IMP
original_reference_id: PMID:30478225
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:30478225
supporting_text: TBX2 and TBX3 act downstream of canonical WNT
signaling in patterning and differentiation of the mouse ureteric
mesenchyme.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15110721
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15110721
supporting_text: Sox1 acts through multiple independent pathways to
promote neurogenesis.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:15110721
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15110721
supporting_text: Sox1 acts through multiple independent pathways to
promote neurogenesis.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31073040
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:31073040
supporting_text: LMBR1L regulates lymphopoiesis through Wnt/β-catenin
signaling.
- term:
id: GO:0005911
label: cell-cell junction
evidence_type: IDA
original_reference_id: PMID:24338362
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24338362
supporting_text: Dec 11. POPX2 phosphatase regulates the KIF3 kinesin
motor complex.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:15314168
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15314168
supporting_text: Cyclin D1 genetic heterozygosity regulates colonic
epithelial cell differentiation and tumor number in ApcMin mice.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IMP
original_reference_id: PMID:26371318
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26371318
supporting_text: Lhx2 regulates the timing of β-catenin-dependent
cortical neurogenesis.
- term:
id: GO:0005634
label: nucleus
evidence_type: IMP
original_reference_id: PMID:26371318
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26371318
supporting_text: Lhx2 regulates the timing of β-catenin-dependent
cortical neurogenesis.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:26371318
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26371318
supporting_text: Lhx2 regulates the timing of β-catenin-dependent
cortical neurogenesis.
- term:
id: GO:0050768
label: negative regulation of neurogenesis
evidence_type: IMP
original_reference_id: PMID:26371318
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26371318
supporting_text: Lhx2 regulates the timing of β-catenin-dependent
cortical neurogenesis.
- term:
id: GO:2000179
label: positive regulation of neural precursor cell proliferation
evidence_type: IMP
original_reference_id: PMID:26371318
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:26371318
supporting_text: Lhx2 regulates the timing of β-catenin-dependent
cortical neurogenesis.
- term:
id: GO:0003682
label: chromatin binding
evidence_type: IDA
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:1990907
label: beta-catenin-TCF complex
evidence_type: IDA
original_reference_id: PMID:9488439
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:9488439
supporting_text: Two members of the Tcf family implicated in
Wnt/beta-catenin signaling during embryogenesis in the mouse.
- term:
id: GO:1990138
label: neuron projection extension
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25232112
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25232112
supporting_text: Dlg5 regulates dendritic spine formation and
synaptogenesis by controlling subcellular N-cadherin localization.
- term:
id: GO:0045202
label: synapse
evidence_type: IDA
original_reference_id: PMID:25232112
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25232112
supporting_text: Dlg5 regulates dendritic spine formation and
synaptogenesis by controlling subcellular N-cadherin localization.
- term:
id: GO:0016525
label: negative regulation of angiogenesis
evidence_type: IMP
original_reference_id: PMID:25961718
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25961718
supporting_text: eCollection 2015. Resveratrol-Induced Vascular
Progenitor Differentiation towards Endothelial Lineage via
MiR-21/Akt/β-Catenin Is Protective in Vessel Graft Models.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:24681597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24681597
supporting_text: Kindlin-1 controls Wnt and TGF-β availability to
regulate cutaneous stem cell proliferation.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:24681597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24681597
supporting_text: Kindlin-1 controls Wnt and TGF-β availability to
regulate cutaneous stem cell proliferation.
- term:
id: GO:0051884
label: regulation of timing of anagen
evidence_type: IDA
original_reference_id: PMID:24681597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24681597
supporting_text: Kindlin-1 controls Wnt and TGF-β availability to
regulate cutaneous stem cell proliferation.
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:24681597
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24681597
supporting_text: Kindlin-1 controls Wnt and TGF-β availability to
regulate cutaneous stem cell proliferation.
- term:
id: GO:0016342
label: catenin complex
evidence_type: IMP
original_reference_id: PMID:11121423
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11121423
supporting_text: 2000 Dec 19. The cadherin cytoplasmic domain is
unstructured in the absence of beta-catenin.
- term:
id: GO:0045296
label: cadherin binding
evidence_type: IPI
original_reference_id: PMID:11121423
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11121423
supporting_text: 2000 Dec 19. The cadherin cytoplasmic domain is
unstructured in the absence of beta-catenin.
- term:
id: GO:0097718
label: disordered domain specific binding
evidence_type: IPI
original_reference_id: PMID:11121423
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11121423
supporting_text: 2000 Dec 19. The cadherin cytoplasmic domain is
unstructured in the absence of beta-catenin.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:0016020
label: membrane
evidence_type: IDA
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IGI
original_reference_id: PMID:20371816
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20371816
supporting_text: LEF1/beta-catenin complex regulates transcription of
the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the
adult brain.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:25979161
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25979161
supporting_text: Transmembrane protein 64 reciprocally regulates
osteoblast and adipocyte differentiation by modulating Wnt/β-catenin
signaling.
- term:
id: GO:1904948
label: midbrain dopaminergic neuron differentiation
evidence_type: IMP
original_reference_id: PMID:19122665
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19122665
supporting_text: Wnt antagonism of Shh facilitates midbrain floor
plate neurogenesis.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:22645310
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22645310
supporting_text: May 29. Prolyl isomerase Pin1 regulates neuronal
differentiation via β-catenin.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:22645310
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22645310
supporting_text: May 29. Prolyl isomerase Pin1 regulates neuronal
differentiation via β-catenin.
- term:
id: GO:0019899
label: enzyme binding
evidence_type: IPI
original_reference_id: PMID:22645310
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22645310
supporting_text: May 29. Prolyl isomerase Pin1 regulates neuronal
differentiation via β-catenin.
- term:
id: GO:1904888
label: cranial skeletal system development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:0030901
label: midbrain development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:0030902
label: hindbrain development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:0061550
label: cranial ganglion development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:1990403
label: embryonic brain development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:1990791
label: dorsal root ganglion development
evidence_type: IMP
original_reference_id: PMID:11262227
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11262227
supporting_text: Inactivation of the beta-catenin gene by
Wnt1-Cre-mediated deletion results in dramatic brain malformation
and failure of craniofacial development.
- term:
id: GO:1990909
label: Wnt signalosome
evidence_type: IDA
original_reference_id: PMID:22899650
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22899650
supporting_text: Aug 16. LRRK2 functions as a Wnt signaling scaffold,
bridging cytosolic proteins and membrane-localized LRP6.
- term:
id: GO:0019901
label: protein kinase binding
evidence_type: IPI
original_reference_id: PMID:22899650
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22899650
supporting_text: Aug 16. LRRK2 functions as a Wnt signaling scaffold,
bridging cytosolic proteins and membrane-localized LRP6.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:15908431
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:15908431
supporting_text: 2005 May 20. MAGI1 recruits Dll1 to cadherin-based
adherens junctions and stabilizes it on the cell surface.
- term:
id: GO:0010629
label: negative regulation of gene expression
evidence_type: IMP
original_reference_id: PMID:19122665
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19122665
supporting_text: Wnt antagonism of Shh facilitates midbrain floor
plate neurogenesis.
- term:
id: GO:0030182
label: neuron differentiation
evidence_type: IMP
original_reference_id: PMID:25009587
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:25009587
supporting_text: Depletion of canonical Wnt signaling components has a
neuroprotective effect on midbrain dopaminergic neurons in an
MPTP-induced mouse model of Parkinson's disease.
- term:
id: GO:0016600
label: flotillin complex
evidence_type: IDA
original_reference_id: PMID:24046456
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:24046456
supporting_text: 2013 Sep 17. Flotillin microdomains stabilize
cadherins at cell-cell junctions.
- term:
id: GO:0000791
label: euchromatin
evidence_type: IDA
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0005667
label: transcription regulator complex
evidence_type: IDA
original_reference_id: PMID:22723415
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:22723415
supporting_text: Wnt/β-catenin signaling regulates telomerase in stem
cells and cancer cells.
- term:
id: GO:0002052
label: positive regulation of neuroblast proliferation
evidence_type: IMP
original_reference_id: PMID:21325504
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21325504
supporting_text: Frizzled3 is required for neurogenesis and target
innervation during sympathetic nervous system development.
- term:
id: GO:0045976
label: negative regulation of mitotic cell cycle, embryonic
evidence_type: IMP
original_reference_id: PMID:21325504
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21325504
supporting_text: Frizzled3 is required for neurogenesis and target
innervation during sympathetic nervous system development.
- term:
id: GO:0061549
label: sympathetic ganglion development
evidence_type: IMP
original_reference_id: PMID:21325504
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21325504
supporting_text: Frizzled3 is required for neurogenesis and target
innervation during sympathetic nervous system development.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:23856522
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23856522
supporting_text: 2013 Jul 15. Jmjd3 controls mesodermal and
cardiovascular differentiation of embryonic stem cells.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:23856522
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23856522
supporting_text: 2013 Jul 15. Jmjd3 controls mesodermal and
cardiovascular differentiation of embryonic stem cells.
- term:
id: GO:0016922
label: nuclear receptor binding
evidence_type: IPI
original_reference_id: PMID:14687547
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:14687547
supporting_text: RORalpha coordinates reciprocal signaling in
cerebellar development through sonic hedgehog and calcium-dependent
pathways.
- term:
id: GO:0033234
label: negative regulation of protein sumoylation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048643
label: positive regulation of skeletal muscle tissue development
evidence_type: IMP
original_reference_id: PMID:23460868
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:23460868
supporting_text: β-catenin is essential for efficient in vitro
premyogenic mesoderm formation but can be partially compensated by
retinoic acid signalling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:11590244
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:11590244
supporting_text: 'alphaT-catenin: a novel tissue-specific beta-catenin-binding
protein mediating strong cell-cell adhesion.'
- term:
id: GO:0036023
label: embryonic skeletal limb joint morphogenesis
evidence_type: IGI
original_reference_id: PMID:21262216
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21262216
supporting_text: Jan 22. The zinc finger transcription factors Osr1
and Osr2 control synovial joint formation.
- term:
id: GO:0045294
label: alpha-catenin binding
evidence_type: IPI
original_reference_id: PMID:21393547
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:21393547
supporting_text: A polarized epithelium organized by beta- and
alpha-catenin predates cadherin and metazoan origins.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18636119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:18636119
supporting_text: Coxsackievirus and adenovirus receptor (CAR) mediates
atrioventricular-node function and connexin 45 localization in the
murine heart.
- term:
id: GO:0072182
label: regulation of nephron tubule epithelial cell differentiation
evidence_type: IMP
original_reference_id: PMID:19112489
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19112489
supporting_text: 2008 Dec 26. Gata3 acts downstream of beta-catenin
signaling to prevent ectopic metanephric kidney induction.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IMP
original_reference_id: PMID:19112489
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19112489
supporting_text: 2008 Dec 26. Gata3 acts downstream of beta-catenin
signaling to prevent ectopic metanephric kidney induction.
- term:
id: GO:0071944
label: cell periphery
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005938
label: cell cortex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0007155
label: cell adhesion
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0008285
label: negative regulation of cell population proliferation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0010909
label: positive regulation of heparan sulfate proteoglycan biosynthetic
process
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0016342
label: catenin complex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030054
label: cell junction
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030877
label: beta-catenin destruction complex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0030997
label: regulation of centriole-centriole cohesion
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032355
label: response to estradiol
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0032993
label: protein-DNA complex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034333
label: adherens junction assembly
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0034394
label: protein localization to cell surface
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0043065
label: positive regulation of apoptotic process
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048471
label: perinuclear region of cytoplasm
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0048660
label: regulation of smooth muscle cell proliferation
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0061154
label: endothelial tube morphogenesis
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0070369
label: beta-catenin-TCF7L2 complex
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071363
label: cellular response to growth factor stimulus
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0071681
label: cellular response to indole-3-methanol
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0090279
label: regulation of calcium ion import
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:2000008
label: regulation of protein localization to cell surface
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20802155
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20802155
supporting_text: Sox17 modulates Wnt3A/beta-catenin-mediated
transcriptional activation of the Lef-1 promoter.
- term:
id: GO:0034750
label: Scrib-APC-beta-catenin complex
evidence_type: IDA
original_reference_id: PMID:16611247
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16611247
supporting_text: Human scribble, a novel tumor suppressor identified
as a target of high-risk HPV E6 for ubiquitin-mediated degradation,
interacts with adenomatous polyposis coli.
- term:
id: GO:0005813
label: centrosome
evidence_type: IDA
original_reference_id: PMID:20300119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20300119
supporting_text: Conductin/axin2 and Wnt signalling regulates
centrosome cohesion.
- term:
id: GO:0070602
label: regulation of centromeric sister chromatid cohesion
evidence_type: IMP
original_reference_id: PMID:20300119
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20300119
supporting_text: Conductin/axin2 and Wnt signalling regulates
centrosome cohesion.
- term:
id: GO:0003713
label: transcription coactivator activity
evidence_type: IDA
original_reference_id: PMID:12949260
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12949260
supporting_text: Wnt4 overexpression disrupts normal testicular
vasculature and inhibits testosterone synthesis by repressing
steroidogenic factor 1/beta-catenin synergy.
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IDA
original_reference_id: PMID:12949260
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:12949260
supporting_text: Wnt4 overexpression disrupts normal testicular
vasculature and inhibits testosterone synthesis by repressing
steroidogenic factor 1/beta-catenin synergy.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20413591
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20413591
supporting_text: 2010 Apr 22. The TRPV4 channel contributes to
intercellular junction formation in keratinocytes.
- term:
id: GO:0003223
label: ventricular compact myocardium morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0010718
label: positive regulation of epithelial to mesenchymal transition
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0060038
label: cardiac muscle cell proliferation
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0060485
label: mesenchyme development
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0060947
label: cardiac vascular smooth muscle cell differentiation
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0060982
label: coronary artery morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0060983
label: epicardium-derived cardiac vascular smooth muscle cell
differentiation
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0072132
label: mesenchyme morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:20299672
supporting_text: Epicardial-myocardial signaling directing coronary
vasculogenesis.
- term:
id: GO:0140297
label: DNA-binding transcription factor binding
evidence_type: IPI
original_reference_id: PMID:17331723
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:17331723
supporting_text: Mar 1. Inhibitory Gli3 activity negatively regulates
Wnt/beta-catenin signaling.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16611247
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16611247
supporting_text: Human scribble, a novel tumor suppressor identified
as a target of high-risk HPV E6 for ubiquitin-mediated degradation,
interacts with adenomatous polyposis coli.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19458197
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:19458197
supporting_text: 2009 May 20. Scribble interacts with beta-catenin to
localize synaptic vesicles to synapses.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:10954424
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:10954424
supporting_text: The mammalian homologue of the Caenorhabditis elegans
polarity protein PAR-6 is a binding partner for the Rho GTPases
Cdc42 and Rac1.
- term:
id: GO:0019903
label: protein phosphatase binding
evidence_type: IPI
original_reference_id: PMID:16973135
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
supported_by:
- reference_id: PMID:16973135
supporting_text: 2006 Sep 14. Intracellular substrates of
brain-enriched receptor protein tyrosine phosphatase rho
(RPTPrho/PTPRT).
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-MMU-209096
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
references:
- id: GO_REF:0000008
title: Gene Ontology annotation by the MGI curatorial staff, curated
orthology
findings: []
- id: PMID:10662781
title: Requirement for beta-catenin in anterior-posterior axis formation in
mice.
findings: []
- id: PMID:11371349
title: beta-Catenin controls hair follicle morphogenesis and stem cell
differentiation in the skin.
findings: []
- id: PMID:12194849
title: Formation of multiple hearts in mice following deletion of
beta-catenin in the embryonic endoderm.
findings: []
- id: PMID:12235125
title: Beta-catenin-induced melanoma growth requires the downstream target
Microphthalmia-associated transcription factor.
findings: []
- id: PMID:12464179
title: Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating
cell-type-specific proliferation during development.
findings: []
- id: PMID:12717450
title: A role for Wnt signalling in self-renewal of haematopoietic stem
cells.
findings: []
- id: PMID:12813461
title: Activation of beta-catenin in prostate epithelium induces
hyperplasias and squamous transdifferentiation.
findings: []
- id: PMID:12885771
title: beta-Catenin is required for specification of proximal/distal cell
fate during lung morphogenesis.
findings: []
- id: PMID:12923052
title: Genetic interaction between Wnt/beta-catenin and BMP receptor
signaling during formation of the AER and the dorsal-ventral axis in the
limb.
findings: []
- id: PMID:12975353
title: The conditional inactivation of the beta-catenin gene in endothelial
cells causes a defective vascular pattern and increased vascular
fragility.
findings: []
- id: PMID:14608382
title: Deletion of beta-catenin impairs T cell development.
findings: []
- id: PMID:14622577
title: Role of beta-catenin in synaptic vesicle localization and presynaptic
assembly.
findings: []
- id: PMID:15131783
title: 'Inducible Cre-mediated control of gene expression in the murine gastrointestinal
tract: effect of loss of beta-catenin.'
findings: []
- id: PMID:15708565
title: Effects of canonical Wnt signaling on dorso-ventral specification of
the mouse telencephalon.
findings: []
- id: PMID:15866163
title: Canonical Wnt/beta-catenin signaling prevents osteoblasts from
differentiating into chondrocytes.
findings: []
- id: PMID:15866165
title: Canonical Wnt signaling in differentiated osteoblasts controls
osteoclast differentiation.
findings: []
- id: PMID:15907834
title: Wnt/beta-catenin signaling acts upstream of N-myc, BMP4, and FGF
signaling to regulate proximal-distal patterning in the lung.
findings: []
- id: PMID:16040629
title: Beta-catenin regulates differentiation of respiratory epithelial
cells in vivo.
findings: []
- id: PMID:16102745
title: 'The duality of beta-catenin function: a requirement in lens morphogenesis
and signaling suppression of lens fate in periocular ectoderm.'
findings: []
- id: PMID:16478791
title: APC inhibits ERK pathway activation and cellular proliferation
induced by RAS.
findings: []
- id: PMID:16621792
title: 'Membrane localization of adenomatous polyposis coli protein at cellular
protrusions: targeting sequences and regulation by beta-catenin.'
findings: []
- id: PMID:16818445
title: Wnt9a signaling is required for joint integrity and regulation of Ihh
during chondrogenesis.
findings: []
- id: PMID:17537789
title: Wnt/beta-catenin signaling regulates nephron induction during mouse
kidney development.
findings: []
- id: PMID:17706960
title: Persistent expression of stabilized beta-catenin delays maturation of
radial glial cells into intermediate progenitors.
findings: []
- id: PMID:18231602
title: Formation and differentiation of multiple mesenchymal lineages during
lung development is regulated by beta-catenin signaling.
findings: []
- id: PMID:18533146
title: An FGF-WNT gene regulatory network controls lung mesenchyme
development.
findings: []
- id: PMID:18635608
title: Tissue-specific requirements of beta-catenin in external genitalia
development.
findings: []
- id: PMID:19023080
title: Canonical Wnt signaling regulates organ-specific assembly and
differentiation of CNS vasculature.
findings: []
- id: PMID:19060336
title: A Wnt7b-dependent pathway regulates the orientation of epithelial
cell division and establishes the cortico-medullary axis of the mammalian
kidney.
findings: []
- id: PMID:19129494
title: Wnt/beta-catenin signaling is required for CNS, but not non-CNS,
angiogenesis.
findings: []
- id: PMID:19154719
title: Nrarp coordinates endothelial Notch and Wnt signaling to control
vessel density in angiogenesis.
findings: []
- id: PMID:19204372
title: Both the RGS domain and the six C-terminal amino acids of mouse Axin
are required for normal embryogenesis.
findings: []
- id: PMID:19503085
title: HDAC1 and HDAC2 regulate oligodendrocyte differentiation by
disrupting the beta-catenin-TCF interaction.
findings: []
- id: PMID:19619491
title: Reciprocal requirements for EDA/EDAR/NF-kappaB and Wnt/beta-catenin
signaling pathways in hair follicle induction.
findings: []
- id: PMID:19620969
title: A regulatory pathway involving Notch1/beta-catenin/Isl1 determines
cardiac progenitor cell fate.
findings: []
- id: PMID:19690384
title: Wnt signaling regulates smooth muscle precursor development in the
mouse lung via a tenascin C/PDGFR pathway.
findings: []
- id: PMID:20043884
title: Antagonistic crosstalk of Wnt/beta-catenin/Bmp signaling within the
Apical Ectodermal Ridge (AER) regulates interdigit formation.
findings: []
- id: PMID:20454446
title: WNT4/beta-catenin pathway maintains female germ cell survival by
inhibiting activin betaB in the mouse fetal ovary.
findings: []
- id: PMID:20503375
title: Expression analysis of an evolutionarily conserved
metallophosphodiesterase gene, Mpped1, in the normal and
beta-catenin-deficient malformed dorsal telencephalon.
findings: []
- id: PMID:21937711
title: ASPM regulates Wnt signaling pathway activity in the developing
brain.
findings: []
- id: PMID:22102609
title: Increased β-catenin activity in the anterior neural plate induces
ectopic mid-hindbrain characteristics.
findings: []
- id: PMID:22723415
title: Wnt/β-catenin signaling regulates telomerase in stem cells and cancer
cells.
findings: []
- id: PMID:23824574
title: Wnt/β-catenin signalling regulates Sox17 expression and is essential
for organizer and endoderm formation in the mouse.
findings: []
- id: PMID:25083995
title: Canonical WNT signaling components in vascular development and
barrier formation.
findings: []
- id: PMID:28463231
title: Disruption of lineage specification in adult pulmonary mesenchymal
progenitor cells promotes microvascular dysfunction.
findings: []
- id: PMID:8582267
title: Lack of beta-catenin affects mouse development at gastrulation.
findings: []
- id: PMID:9230313
title: The mouse Fused locus encodes Axin, an inhibitor of the Wnt signaling
pathway that regulates embryonic axis formation.
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation
data to orthologs using Ensembl Compara.
findings: []
- id: GO_REF:0000119
title: Automated transfer of experimentally-verified manual GO annotation
data to mouse-human orthologs.
findings: []
- id: PMID:10631168
title: Hippocampus development and generation of dentate gyrus granule cells
is regulated by LEF1.
findings: []
- id: PMID:12551949
title: Lymphoid enhancer factor-1 and beta-catenin inhibit Runx2-dependent
transcriptional activation of the osteocalcin promoter.
findings: []
- id: PMID:12569130
title: Ectodermal Wnt3/beta-catenin signaling is required for the
establishment and maintenance of the apical ectodermal ridge.
findings: []
- id: PMID:15024079
title: Brn-2 expression controls melanoma proliferation and is directly
regulated by beta-catenin.
findings: []
- id: PMID:15371327
title: Wnt/beta-catenin signaling is sufficient and necessary for synovial
joint formation.
findings: []
- id: PMID:15576404
title: Sequential roles of Hedgehog and Wnt signaling in osteoblast
development.
findings: []
- id: PMID:15729346
title: Pax3 functions at a nodal point in melanocyte stem cell
differentiation.
findings: []
- id: PMID:15778706
title: Wnt signalling induces maturation of Paneth cells in intestinal
crypts.
findings: []
- id: PMID:15781477
title: Sox2 induction by FGF and FGFR2 activating mutations inhibits Wnt
signaling and osteoblast differentiation.
findings: []
- id: PMID:15802266
title: Essential role of beta-catenin in postnatal bone acquisition.
findings: []
- id: PMID:16025118
title: Loss of adenomatous polyposis coli gene function disrupts thymic
development.
findings: []
- id: PMID:16192304
title: Beta-catenin is essential for pancreatic acinar but not islet
development.
findings: []
- id: PMID:16581771
title: CCN1/Cyr61 is regulated by the canonical Wnt signal and plays an
important role in Wnt3A-induced osteoblast differentiation of mesenchymal
stem cells.
findings: []
- id: PMID:16678101
title: Homeodomain-mediated beta-catenin-dependent switching events dictate
cell-lineage determination.
findings: []
- id: PMID:16936075
title: The Wnt/beta-catenin pathway regulates Gli-mediated Myf5 expression
during somitogenesis.
findings: []
- id: PMID:17055474
title: The stabilization of beta-catenin leads to impaired primordial germ
cell development via aberrant cell cycle progression.
findings: []
- id: PMID:17128274
title: Wnt-beta-catenin signaling initiates taste papilla development.
findings: []
- id: PMID:17532316
title: Essential roles of mesenchyme-derived beta-catenin in mouse Müllerian
duct morphogenesis.
findings: []
- id: PMID:17767158
title: Modulation of morphogenesis by noncanonical Wnt signaling requires
ATF/CREB family-mediated transcriptional activation of TGFbeta2.
findings: []
- id: PMID:18316368
title: Protein encoded by the Axin(Fu) allele effectively down-regulates Wnt
signaling but exerts a dominant negative effect on c-Jun N-terminal kinase
signaling.
findings: []
- id: PMID:18692041
title: 'Bmp4 is required for tracheal formation: a novel mouse model for tracheal
agenesis.'
findings: []
- id: PMID:19056892
title: A functional link between Wnt signaling and SKP2-independent p27
turnover in mammary tumors.
findings: []
- id: PMID:19282366
title: Genetic interactions of the androgen and Wnt/beta-catenin pathways
for the masculinization of external genitalia.
findings: []
- id: PMID:19515974
title: Dysregulation of the Wnt pathway inhibits timely myelination and
remyelination in the mammalian CNS.
findings: []
- id: PMID:19686689
title: Wnt2/2b and beta-catenin signaling are necessary and sufficient to
specify lung progenitors in the foregut.
findings: []
- id: PMID:19718027
title: Tcf3 and Tcf4 are essential for long-term homeostasis of skin
epithelia.
findings: []
- id: PMID:19805295
title: beta-Catenin promotes respiratory progenitor identity in mouse
foregut.
findings: []
- id: PMID:20159597
title: Characterization and in vivo pharmacological rescue of a Wnt2-Gata6
pathway required for cardiac inflow tract development.
findings: []
- id: PMID:20627076
title: The Wnt/beta-catenin pathway modulates vascular remodeling and
specification by upregulating Dll4/Notch signaling.
findings: []
- id: PMID:21075118
title: Biochemical and structural characterization of β-catenin interactions
with nonphosphorylated and CK2-phosphorylated Lef-1.
findings: []
- id: PMID:21750544
title: The Wnt3a/β-catenin target gene Mesogenin1 controls the segmentation
clock by activating a Notch signalling program.
findings: []
- id: PMID:22956852
title: Integration of β-catenin, sirtuin, and FOXO signaling protects from
mutant huntingtin toxicity.
findings: []
- id: PMID:24309208
title: Wnt/β-catenin signaling in dermal condensates is required for hair
follicle formation.
findings: []
- id: PMID:27713508
title: Conditional Knockout of Breast Carcinoma Amplified Sequence 2 (BCAS2)
in Mouse Forebrain Causes Dendritic Malformation via β-catenin.
findings: []
- id: PMID:31222549
title: The Shisa3 knockout mouse exhibits normal bone phenotype.
findings: []
- id: GO_REF:0000024
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000033
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000043
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000044
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000096
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000117
title: 'TODO: Fetch title'
findings: []
- id: GO_REF:0000120
title: 'TODO: Fetch title'
findings: []
- id: PMID:10318824
title: Functional domains of axin. Importance of the C terminus as an
oligomerization domain.
findings: []
- id: PMID:10330403
title: Domains of axin involved in protein-protein interactions, Wnt pathway
inhibition, and intracellular localization.
findings: []
- id: PMID:10481074
title: A GSK3-binding peptide from FRAT1 selectively inhibits the
GSK3-catalysed phosphorylation of axin and beta-catenin.
findings: []
- id: PMID:10873669
title: Identification of a novel beta-catenin-interacting protein.
findings: []
- id: PMID:10882138
title: Structure of the dimerization and beta-catenin-binding region of
alpha-catenin.
findings: []
- id: PMID:10898789
title: Inhibition of Wnt signaling by ICAT, a novel beta-catenin-interacting
protein.
findings: []
- id: PMID:10954424
title: The mammalian homologue of the Caenorhabditis elegans polarity
protein PAR-6 is a binding partner for the Rho GTPases Cdc42 and Rac1.
findings: []
- id: PMID:11104755
title: Substitution of a glycogen synthase kinase-3beta phosphorylation site
in presenilin 1 separates presenilin function from beta-catenin signaling.
findings: []
- id: PMID:11121423
title: The cadherin cytoplasmic domain is unstructured in the absence of
beta-catenin. A possible mechanism for regulating cadherin turnover.
findings: []
- id: PMID:11262227
title: Inactivation of the beta-catenin gene by Wnt1-Cre-mediated deletion
results in dramatic brain malformation and failure of craniofacial
development.
findings: []
- id: PMID:11348595
title: The structure of the beta-catenin/E-cadherin complex and the
molecular basis of diverse ligand recognition by beta-catenin.
findings: []
- id: PMID:11590244
title: 'alphaT-catenin: a novel tissue-specific beta-catenin-binding protein mediating
strong cell-cell adhesion.'
findings: []
- id: PMID:11731229
title: FAM deubiquitylating enzyme is essential for preimplantation mouse
embryo development.
findings: []
- id: PMID:11731231
title: Dynamic expression and nuclear accumulation of beta-catenin during
the development of hair follicle-derived structures.
findings: []
- id: PMID:11731265
title: Expression of Tcf/Lef and sFrp and localization of beta-catenin in
the developing mouse lung.
findings: []
- id: PMID:11872843
title: Colorectal cancer in mice genetically deficient in the mucin Muc2.
findings: []
- id: PMID:12040017
title: 'Mouse mammary epithelial cells express the Na-K-Cl cotransporter, NKCC1:
characterization, localization, and involvement in ductal development and morphogenesis.'
findings: []
- id: PMID:12055200
title: Regulation of Wnt signaling during adipogenesis.
findings: []
- id: PMID:12181493
title: TCL1 participates in early embryonic development and is overexpressed
in human seminomas.
findings: []
- id: PMID:12203715
title: Localization of the novel Xin protein to the adherens junction
complex in cardiac and skeletal muscle during development.
findings: []
- id: PMID:12408825
title: ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription
factors and the general coactivator p300 using independent structural
modules.
findings: []
- id: PMID:12421363
title: Axin negatively affects tau phosphorylation by glycogen synthase
kinase 3beta.
findings: []
- id: PMID:12432063
title: Protein kinase CKII regulates the interaction of beta-catenin with
alpha-catenin and its protein stability.
findings: []
- id: PMID:12494996
title: Loss of desmoglein 2 suggests essential functions for early embryonic
development and proliferation of embryonal stem cells.
findings: []
- id: PMID:12611902
title: Regulation of the SHP-2 tyrosine phosphatase by a novel cholesterol-
and cell confluence-dependent mechanism.
findings: []
- id: PMID:12695331
title: NF2 deficiency promotes tumorigenesis and metastasis by destabilizing
adherens junctions.
findings: []
- id: PMID:12861022
title: T-cell factor 4N (TCF-4N), a novel isoform of mouse TCF-4, synergizes
with beta-catenin to coactivate C/EBPalpha and steroidogenic factor 1
transcription factors.
findings: []
- id: PMID:12874278
title: The PDZ protein tax-interacting protein-1 inhibits beta-catenin
transcriptional activity and growth of colorectal cancer cells.
findings: []
- id: PMID:12949260
title: Wnt4 overexpression disrupts normal testicular vasculature and
inhibits testosterone synthesis by repressing steroidogenic factor
1/beta-catenin synergy.
findings: []
- id: PMID:14597196
title: Overexpression of Sonic Hedgehog suppresses embryonic hair follicle
morphogenesis.
findings: []
- id: PMID:14625387
title: Foxj1 is required for apical localization of ezrin in airway
epithelial cells.
findings: []
- id: PMID:14647292
title: Mammalian formin-1 participates in adherens junctions and
polymerization of linear actin cables.
findings: []
- id: PMID:14657280
title: 'Lamellipodium extension and cadherin adhesion: two cell responses to cadherin
activation relying on distinct signalling pathways.'
findings: []
- id: PMID:14687547
title: RORalpha coordinates reciprocal signaling in cerebellar development
through sonic hedgehog and calcium-dependent pathways.
findings: []
- id: PMID:14691142
title: alpha3beta1 integrin-CD151, a component of the cadherin-catenin
complex, regulates PTPmu expression and cell-cell adhesion.
findings: []
- id: PMID:14758363
title: The hyh mutation uncovers roles for alpha Snap in apical protein
localization and control of neural cell fate.
findings: []
- id: PMID:14960280
title: Ozz-E3, a muscle-specific ubiquitin ligase, regulates beta-catenin
degradation during myogenesis.
findings: []
- id: PMID:14981260
title: Nuclear-cytoplasmic shuttling of Axin regulates subcellular
localization of beta-catenin.
findings: []
- id: PMID:15023525
title: Ksp-cadherin is a functional cell-cell adhesion molecule related to
LI-cadherin.
findings: []
- id: PMID:15037549
title: Loss of cell polarity causes severe brain dysplasia in Lgl1 knockout
mice.
findings: []
- id: PMID:15057752
title: Beta-catenin is temporally regulated during normal liver development.
findings: []
- id: PMID:15110721
title: Sox1 acts through multiple independent pathways to promote
neurogenesis.
findings: []
- id: PMID:15148305
title: Mammalian Fat1 cadherin regulates actin dynamics and cell-cell
contact.
findings: []
- id: PMID:15226261
title: Orpk mouse model of polycystic kidney disease reveals essential role
of primary cilia in pancreatic tissue organization.
findings: []
- id: PMID:15292239
title: Defects in cell adhesion and the visceral endoderm following ablation
of nonmuscle myosin heavy chain II-A in mice.
findings: []
- id: PMID:15314168
title: Cyclin D1 genetic heterozygosity regulates colonic epithelial cell
differentiation and tumor number in ApcMin mice.
findings: []
- id: PMID:15327768
title: Mechanism of phosphorylation-dependent binding of APC to beta-catenin
and its role in beta-catenin degradation.
findings: []
- id: PMID:15525667
title: Stabilization of beta-catenin in the mouse zygote leads to premature
epithelial-mesenchymal transition in the epiblast.
findings: []
- id: PMID:15574752
title: Role of a BCL9-related beta-catenin-binding protein, B9L, in
tumorigenesis induced by aberrant activation of Wnt signaling.
findings: []
- id: PMID:15645444
title: Gene expression profile analysis of mouse colon embryonic
development.
findings: []
- id: PMID:15673614
title: Wnt10b deficiency promotes coexpression of myogenic and adipogenic
programs in myoblasts.
findings: []
- id: PMID:15775979
title: E-cadherin is essential for in vivo epidermal barrier function by
regulating tight junctions.
findings: []
- id: PMID:15834408
title: The KIF3 motor transports N-cadherin and organizes the developing
neuroepithelium.
findings: []
- id: PMID:15905404
title: Functional interaction between beta-catenin and FOXO in oxidative
stress signaling.
findings: []
- id: PMID:15908431
title: MAGI1 recruits Dll1 to cadherin-based adherens junctions and
stabilizes it on the cell surface.
findings: []
- id: PMID:15987773
title: Forkhead box A1 regulates prostate ductal morphogenesis and promotes
epithelial cell maturation.
findings: []
- id: PMID:16199027
title: Vezatin, a protein associated to adherens junctions, is required for
mouse blastocyst morphogenesis.
findings: []
- id: PMID:16249236
title: Shroom regulates epithelial cell shape via the apical positioning of
an actomyosin network.
findings: []
- id: PMID:16293619
title: 'Thermodynamics of beta-catenin-ligand interactions: the roles of the N-
and C-terminal tails in modulating binding affinity.'
findings: []
- id: PMID:16364283
title: Hex homeobox gene controls the transition of the endoderm to a
pseudostratified, cell emergent epithelium for liver bud development.
findings: []
- id: PMID:16368433
title: Deficient E-cadherin adhesion in C57BL/6J-Min/+ mice is associated
with increased tyrosine kinase activity and RhoA-dependent actomyosin
contractility.
findings: []
- id: PMID:16418220
title: Desmocollin 3 is required for pre-implantation development of the
mouse embryo.
findings: []
- id: PMID:16439479
title: Foxf1 and Foxf2 control murine gut development by limiting
mesenchymal Wnt signaling and promoting extracellular matrix production.
findings: []
- id: PMID:16481394
title: 'The transitional junction: a new functional subcellular domain at the
intercalated disc.'
findings: []
- id: PMID:16489008
title: Patched1 functions as a gatekeeper by promoting cell cycle
progression.
findings: []
- id: PMID:16611247
title: Human scribble, a novel tumor suppressor identified as a target of
high-risk HPV E6 for ubiquitin-mediated degradation, interacts with
adenomatous polyposis coli.
findings: []
- id: PMID:16678815
title: Lef1 is required for the transition of Wnt signaling from mesenchymal
to epithelial cells in the mouse embryonic mammary gland.
findings: []
- id: PMID:16740478
title: Apc tumor suppressor gene is the "zonation-keeper" of mouse liver.
findings: []
- id: PMID:16858399
title: C3G regulates the size of the cerebral cortex neural precursor
population.
findings: []
- id: PMID:16892058
title: The Rho-GTPase cdc42 regulates neural progenitor fate at the apical
surface.
findings: []
- id: PMID:16962386
title: 'Tissue, cellular and sub-cellular localization of the Vangl2 protein during
embryonic development: effect of the Lp mutation.'
findings: []
- id: PMID:16973135
title: Intracellular substrates of brain-enriched receptor protein tyrosine
phosphatase rho (RPTPrho/PTPRT).
findings: []
- id: PMID:16989802
title: Levels of mesenchymal FGFR2 signaling modulate smooth muscle
progenitor cell commitment in the lung.
findings: []
- id: PMID:17130295
title: Distinct subdomain organization and molecular composition of a tight
junction with adherens junction features.
findings: []
- id: PMID:17331723
title: Inhibitory Gli3 activity negatively regulates Wnt/beta-catenin
signaling.
findings: []
- id: PMID:17535849
title: A unique and specific interaction between alphaT-catenin and
plakophilin-2 in the area composita, the mixed-type junctional structure
of cardiac intercalated discs.
findings: []
- id: PMID:17544522
title: Targeted disruption of the murine large nuclear KIAA1440/Ints1
protein causes growth arrest in early blastocyst stage embryos and
eventual apoptotic cell death.
findings: []
- id: PMID:17560563
title: Fgf10 dosage is critical for the amplification of epithelial cell
progenitors and for the formation of multiple mesenchymal lineages during
lung development.
findings: []
- id: PMID:17596282
title: Unique mechanisms of growth regulation and tumor suppression upon Apc
inactivation in the pancreas.
findings: []
- id: PMID:17615359
title: Regulation of spontaneous intestinal tumorigenesis through the
adaptor protein MyD88.
findings: []
- id: PMID:17666436
title: Shroom2, a myosin-VIIa- and actin-binding protein, directly interacts
with ZO-1 at tight junctions.
findings: []
- id: PMID:17671182
title: Haploinsufficiency of Krüppel-like factor 4 promotes adenomatous
polyposis coli dependent intestinal tumorigenesis.
findings: []
- id: PMID:17920587
title: FERM protein EPB41L5 is a novel member of the mammalian CRB-MPP5
polarity complex.
findings: []
- id: PMID:18202148
title: Cooperative control via lymphoid enhancer factor 1/T cell factor 3
and estrogen receptor-alpha for uterine gene regulation by estrogen.
findings: []
- id: PMID:18632848
title: SUMOylation target sites at the C terminus protect Axin from
ubiquitination and confer protein stability.
findings: []
- id: PMID:18636119
title: Coxsackievirus and adenovirus receptor (CAR) mediates
atrioventricular-node function and connexin 45 localization in the murine
heart.
findings: []
- id: PMID:18816447
title: 'Diverse roles of E-cadherin in the morphogenesis of the submandibular
gland: insights into the formation of acinar and ductal structures.'
findings: []
- id: PMID:18978355
title: Overexpression of TEAD-1 in transgenic mouse striated muscles
produces a slower skeletal muscle contractile phenotype.
findings: []
- id: PMID:19107203
title: Direct inhibition of GSK3beta by the phosphorylated cytoplasmic
domain of LRP6 in Wnt/beta-catenin signaling.
findings: []
- id: PMID:19112489
title: Gata3 acts downstream of beta-catenin signaling to prevent ectopic
metanephric kidney induction.
findings: []
- id: PMID:19122665
title: Wnt antagonism of Shh facilitates midbrain floor plate neurogenesis.
findings: []
- id: PMID:19151727
title: Regulation of cardiovascular development and integrity by the heart
of glass-cerebral cavernous malformation protein pathway.
findings: []
- id: PMID:19213727
title: Wnt11 promotes osteoblast maturation and mineralization through
R-spondin 2.
findings: []
- id: PMID:19458197
title: Scribble interacts with beta-catenin to localize synaptic vesicles to
synapses.
findings: []
- id: PMID:19497282
title: Wnt7a activates the planar cell polarity pathway to drive the
symmetric expansion of satellite stem cells.
findings: []
- id: PMID:19725955
title: Arginine methyltransferase CARM1/PRMT4 regulates endochondral
ossification.
findings: []
- id: PMID:19796622
title: Uncovering early response of gene regulatory networks in ESCs by
systematic induction of transcription factors.
findings: []
- id: PMID:19850029
title: A critical role for sFRP proteins in maintaining caudal neural tube
closure in mice via inhibition of BMP signaling.
findings: []
- id: PMID:19966784
title: Sec24b selectively sorts Vangl2 to regulate planar cell polarity
during neural tube closure.
findings: []
- id: PMID:20016102
title: The small GTPase Rac1 regulates auditory hair cell morphogenesis.
findings: []
- id: PMID:20089884
title: Milk secretion and ejection are impaired in the mammary gland of mice
harboring a Cx43 mutant while expression and localization of tight and
adherens junction proteins remain unchanged.
findings: []
- id: PMID:20299672
title: Epicardial-myocardial signaling directing coronary vasculogenesis.
findings: []
- id: PMID:20300119
title: Conductin/axin2 and Wnt signalling regulates centrosome cohesion.
findings: []
- id: PMID:20371816
title: LEF1/beta-catenin complex regulates transcription of the Cav3.1
calcium channel gene (Cacna1g) in thalamic neurons of the adult brain.
findings: []
- id: PMID:20399730
title: The apical complex couples cell fate and cell survival to cerebral
cortical development.
findings: []
- id: PMID:20413591
title: The TRPV4 channel contributes to intercellular junction formation in
keratinocytes.
findings: []
- id: PMID:20531388
title: Mutant huntingtin-impaired degradation of beta-catenin causes
neurotoxicity in Huntington's disease.
findings: []
- id: PMID:20802155
title: Sox17 modulates Wnt3A/beta-catenin-mediated transcriptional
activation of the Lef-1 promoter.
findings: []
- id: PMID:20837657
title: Abelson family kinases regulate Frizzled planar cell polarity
signaling via Dsh phosphorylation.
findings: []
- id: PMID:21103407
title: The leukemia-associated Mllt10/Af10-Dot1l are Tcf4/β-catenin
coactivators essential for intestinal homeostasis.
findings: []
- id: PMID:21262216
title: The zinc finger transcription factors Osr1 and Osr2 control synovial
joint formation.
findings: []
- id: PMID:21325504
title: Frizzled3 is required for neurogenesis and target innervation during
sympathetic nervous system development.
findings: []
- id: PMID:21350016
title: Canonical Wnt9b signaling balances progenitor cell expansion and
differentiation during kidney development.
findings: []
- id: PMID:21377456
title: Grainyhead-like 2 regulates neural tube closure and adhesion molecule
expression during neural fold fusion.
findings: []
- id: PMID:21393547
title: A polarized epithelium organized by beta- and alpha-catenin predates
cadherin and metazoan origins.
findings: []
- id: PMID:21512031
title: Hippo pathway inhibits Wnt signaling to restrain cardiomyocyte
proliferation and heart size.
findings: []
- id: PMID:21552260
title: Nemo kinase phosphorylates β-catenin to promote ommatidial rotation
and connects core PCP factors to E-cadherin-β-catenin.
findings: []
- id: PMID:21730140
title: Ezrin-mediated apical integrity is required for intestinal
homeostasis.
findings: []
- id: PMID:21751375
title: Functional analysis of novel phosphorylation sites of CREB-binding
protein using mass spectrometry and mammalian two-hybrid assays.
findings: []
- id: PMID:21752258
title: 'A Wnt1 regulated Frizzled-1/β-Catenin signaling pathway as a candidate
regulatory circuit controlling mesencephalic dopaminergic neuron-astrocyte crosstalk:
Therapeutical relevance for neuron survival and neuroprotection.'
findings: []
- id: PMID:21991325
title: RSPO1/β-catenin signaling pathway regulates oogonia differentiation
and entry into meiosis in the mouse fetal ovary.
findings: []
- id: PMID:21991385
title: Adhesion protein VSIG1 is required for the proper differentiation of
glandular gastric epithelia.
findings: []
- id: PMID:22083958
title: Histone H1 recruitment by CHD8 is essential for suppression of the
Wnt-β-catenin signaling pathway.
findings: []
- id: PMID:22139371
title: Bardet-Biedl syndrome 3 (Bbs3) knockout mouse model reveals common
BBS-associated phenotypes and Bbs3 unique phenotypes.
findings: []
- id: PMID:22645310
title: Prolyl isomerase Pin1 regulates neuronal differentiation via
β-catenin.
findings: []
- id: PMID:22665494
title: mrhl RNA, a long noncoding RNA, negatively regulates Wnt signaling
through its protein partner Ddx5/p68 in mouse spermatogonial cells.
findings: []
- id: PMID:22899650
title: LRRK2 functions as a Wnt signaling scaffold, bridging cytosolic
proteins and membrane-localized LRP6.
findings: []
- id: PMID:23266329
title: Kruppel-like factor 5 controls villus formation and initiation of
cytodifferentiation in the embryonic intestinal epithelium.
findings: []
- id: PMID:23273993
title: Intestinal tumorigenesis initiated by dedifferentiation and
acquisition of stem-cell-like properties.
findings: []
- id: PMID:23377854
title: Physiological role of β-catenin/TCF signaling in neurons of the adult
brain.
findings: []
- id: PMID:23460868
title: β-catenin is essential for efficient in vitro premyogenic mesoderm
formation but can be partially compensated by retinoic acid signalling.
findings: []
- id: PMID:23610556
title: A positive feedback loop involving Gcm1 and Fzd5 directs chorionic
branching morphogenesis in the placenta.
findings: []
- id: PMID:23740243
title: Activation of the transcription factor GLI1 by WNT signaling
underlies the role of SULFATASE 2 as a regulator of tissue regeneration.
findings: []
- id: PMID:23856522
title: Jmjd3 controls mesodermal and cardiovascular differentiation of
embryonic stem cells.
findings: []
- id: PMID:23863479
title: Tumor suppressor Nf2 limits expansion of the neural progenitor pool
by inhibiting Yap/Taz transcriptional coactivators.
findings: []
- id: PMID:24046456
title: Flotillin microdomains stabilize cadherins at cell-cell junctions.
findings: []
- id: PMID:24191021
title: Sox9 plays multiple roles in the lung epithelium during branching
morphogenesis.
findings: []
- id: PMID:24338362
title: POPX2 phosphatase regulates the KIF3 kinesin motor complex.
findings: []
- id: PMID:24681597
title: Kindlin-1 controls Wnt and TGF-β availability to regulate cutaneous
stem cell proliferation.
findings: []
- id: PMID:24847765
title: From inception to output, Tcf1 and Lef1 safeguard development of T
cells and innate immune cells.
findings: []
- id: PMID:25009587
title: Depletion of canonical Wnt signaling components has a neuroprotective
effect on midbrain dopaminergic neurons in an MPTP-induced mouse model of
Parkinson's disease.
findings: []
- id: PMID:25232112
title: Dlg5 regulates dendritic spine formation and synaptogenesis by
controlling subcellular N-cadherin localization.
findings: []
- id: PMID:25535395
title: Notch inhibition induces mitotically generated hair cells in
mammalian cochleae via activating the Wnt pathway.
findings: []
- id: PMID:25873176
title: TGIF governs a feed-forward network that empowers Wnt signaling to
drive mammary tumorigenesis.
findings: []
- id: PMID:25961718
title: Resveratrol-Induced Vascular Progenitor Differentiation towards
Endothelial Lineage via MiR-21/Akt/β-Catenin Is Protective in Vessel Graft
Models.
findings: []
- id: PMID:25979161
title: Transmembrane protein 64 reciprocally regulates osteoblast and
adipocyte differentiation by modulating Wnt/β-catenin signaling.
findings: []
- id: PMID:26371318
title: Lhx2 regulates the timing of β-catenin-dependent cortical
neurogenesis.
findings: []
- id: PMID:26787558
title: SPECC1L deficiency results in increased adherens junction stability
and reduced cranial neural crest cell delamination.
findings: []
- id: PMID:26893351
title: The transcription factor SOX6 contributes to the developmental
origins of obesity by promoting adipogenesis.
findings: []
- id: PMID:27015268
title: Plakophilin-1, a Novel Wnt Signaling Regulator, Is Critical for Tooth
Development and Ameloblast Differentiation.
findings: []
- id: PMID:27375112
title: Antagonistic Regulation of Intercellular Cohesion by Plakophilins 1
and 3.
findings: []
- id: PMID:28641114
title: A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in
Stabilizing Spines and Functional Synapses in the Neocortex.
findings: []
- id: PMID:29148101
title: Homeobox protein MSX-1 inhibits expression of bone morphogenetic
protein 2, bone morphogenetic protein 4, and lymphoid enhancer-binding
factor 1 via Wnt/β-catenin signaling to prevent differentiation of dental
mesenchymal cells during the late bell stage.
findings: []
- id: PMID:29211732
title: The mouse Jhy gene regulates ependymal cell differentiation and
ciliogenesis.
findings: []
- id: PMID:30389919
title: ARTS mediates apoptosis and regeneration of the intestinal stem cell
niche.
findings: []
- id: PMID:30478225
title: TBX2 and TBX3 act downstream of canonical WNT signaling in patterning
and differentiation of the mouse ureteric mesenchyme.
findings: []
- id: PMID:30659184
title: Hematopoietic PBX-interacting protein mediates cartilage degeneration
during the pathogenesis of osteoarthritis.
findings: []
- id: PMID:31073040
title: LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.
findings: []
- id: PMID:32533114
title: ADNP promotes neural differentiation by modulating Wnt/β-catenin
signaling.
findings: []
- id: PMID:32868762
title: The cellular and molecular landscape of hypothalamic patterning and
differentiation from embryonic to late postnatal development.
findings: []
- id: PMID:8555428
title: Immunotoxicologic effects of ethylene dibromide in the mouse and
their modulation by the estrous cycle.
findings: []
- id: PMID:8821035
title: Expression of catenins during mouse embryonic development and in
adult tissues.
findings: []
- id: PMID:8853988
title: Expression and cell membrane localization of catenins during mouse
preimplantation development.
findings: []
- id: PMID:8909549
title: The catenin/cadherin adhesion system is localized in synaptic
junctions bordering transmitter release zones.
findings: []
- id: PMID:9264463
title: A specific domain in alpha-catenin mediates binding to beta-catenin
or plakoglobin.
findings: []
- id: PMID:9488439
title: Two members of the Tcf family implicated in Wnt/beta-catenin
signaling during embryogenesis in the mouse.
findings: []
- id: PMID:9554852
title: Functional interaction of an axin homolog, conductin, with
beta-catenin, APC, and GSK3beta.
findings: []
- id: PMID:9950951
title: Nuclear localization of beta-catenin and loss of apical brush border
actin in cystic tubules of bcl-2 -/- mice.
findings: []
- id: Reactome:R-MMU-209096
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9735211
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9754284
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9773219
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9793864
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9794042
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9823738
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9824206
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9824277
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9824278
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9860515
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9860560
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9860569
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-MMU-9863577
title: 'TODO: Fetch title'
findings: []
- id: Reactome:R-NUL-9761463
title: 'TODO: Fetch title'
findings: []
core_functions:
- description: Links cadherins to the actin cytoskeleton at adherens junctions
to mediate cell-cell adhesion
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: Beta-catenin is a key cytoplasmic component of the
cadherin-catenin complex at adherens junctions, linking the
cytoplasmic tail of E-cadherin to alpha-catenin and the actin
cytoskeleton ... This linkage is crucial for the adhesive function of
classical cadherins in forming stable cell-cell contacts in epithelial
and other tissues
molecular_function:
id: GO:0045296
label: cadherin binding
directly_involved_in:
- id: GO:0098609
label: cell-cell adhesion
locations:
- id: GO:0005912
label: adherens junction
- description: Acts as transcriptional co-activator with TCF/LEF transcription
factors in canonical Wnt signaling
supported_by:
- reference_id: file:mouse/Ctnnb1/Ctnnb1-deep-research.md
supporting_text: In the nucleus, beta-catenin acts as a co-activator for
TCF/LEF transcription factors, forming a transcriptional complex that
drives expression of Wnt target genes ... Beta-catenin also serves as
a central effector in the canonical Wnt signaling pathway, which
controls cell proliferation, differentiation, and fate during
development
molecular_function:
id: GO:0003713
label: transcription coactivator activity
directly_involved_in:
- id: GO:0060070
label: canonical Wnt signaling pathway
locations:
- id: GO:0005634
label: nucleus
suggested_questions:
- question: How does β-catenin coordinate its dual roles in cell adhesion and
Wnt signaling, and what mechanisms prevent crosstalk?
- question: What determines the tissue-specific requirements for β-catenin in
development versus homeostasis?
- question: How do different β-catenin mutations lead to distinct
developmental disorders and cancer types?
- question: What role does β-catenin play in stem cell maintenance and
differentiation across different tissue types?
suggested_experiments:
- description: Single-cell RNA sequencing of tissues with conditional
β-catenin knockout to map cell-type-specific transcriptional programs
- description: Super-resolution microscopy to study β-catenin dynamics between
adherens junctions and the nucleus during Wnt signaling
- description: Cryo-EM structural determination of β-catenin in complex with
different binding partners like cadherins and TCF/LEF
- description: Lineage tracing in mouse models to study β-catenin function in
stem cell fate decisions during development and regeneration
status: IN_PROGRESS
📊 View Pathway Visualization Interactive pathway diagram with detailed annotations