Edn1 encodes preproendothelin-1, the precursor of the secreted endothelin-1 peptide. Mature ET-1 binds endothelin A and B receptors to regulate vascular smooth muscle contraction, blood pressure, renal/podocyte signaling, craniofacial and cardiovascular development, and sympathetic axon guidance.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0006874
intracellular calcium ion homeostasis
|
IBA
GO_REF:0000033 |
KEEP AS NON CORE |
Summary: intracellular calcium ion homeostasis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0045987
positive regulation of smooth muscle contraction
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: positive regulation of smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon identifies ET-1 as a potent vasoconstrictor whose ETA signaling in vascular smooth muscle promotes sustained contraction.
|
|
GO:0003100
regulation of systemic arterial blood pressure by endothelin
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: regulation of systemic arterial blood pressure by endothelin is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes ET-1 as a central regulator of vascular tone and blood pressure through receptor-specific endothelin signaling.
|
|
GO:0005179
hormone activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: hormone activity is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon describes Edn1 as encoding a secreted peptide hormone precursor that yields mature endothelin-1, supporting hormone/receptor ligand activity.
|
|
GO:0005615
extracellular space
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0014826
vein smooth muscle contraction
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: vein smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0031707
endothelin A receptor binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: endothelin A receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETA/EDNRA receptors, supporting endothelin A receptor binding.
|
|
GO:0031708
endothelin B receptor binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: endothelin B receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETB/EDNRB receptors, supporting endothelin B receptor binding.
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: extracellular region is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0019229
regulation of vasoconstriction
|
IEA
GO_REF:0000002 |
MODIFY |
Summary: regulation of vasoconstriction captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than vasoconstriction for this gene. Replace with vasoconstriction to align the annotation with the reviewed evidence.
Proposed replacements:
vasoconstriction
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0042310
vasoconstriction
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: vasoconstriction is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0097746
blood vessel diameter maintenance
|
IEA
GO_REF:0000043 |
KEEP AS NON CORE |
Summary: blood vessel diameter maintenance is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0001666
response to hypoxia
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: response to hypoxia is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0001821
histamine secretion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: histamine secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0003100
regulation of systemic arterial blood pressure by endothelin
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: regulation of systemic arterial blood pressure by endothelin is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes ET-1 as a central regulator of vascular tone and blood pressure through receptor-specific endothelin signaling.
|
|
GO:0005125
cytokine activity
|
IEA
GO_REF:0000107 |
MODIFY |
Summary: cytokine activity captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than receptor ligand activity for this gene. Replace with receptor ligand activity to align the annotation with the reviewed evidence.
Proposed replacements:
receptor ligand activity
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0005179
hormone activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: hormone activity is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon describes Edn1 as encoding a secreted peptide hormone precursor that yields mature endothelin-1, supporting hormone/receptor ligand activity.
|
|
GO:0005615
extracellular space
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000107 |
REMOVE |
Summary: cytoplasm is not supported as an appropriate annotation for Edn1 after review of the available mouse evidence.
Reason: The term appears to reflect either an unsupported transfer, a paralog/family overreach, or a localization/process inconsistent with the curated Edn1 biology.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0006874
intracellular calcium ion homeostasis
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: intracellular calcium ion homeostasis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0007166
cell surface receptor signaling pathway
|
IEA
GO_REF:0000107 |
MODIFY |
Summary: cell surface receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007186
G protein-coupled receptor signaling pathway
|
IEA
GO_REF:0000107 |
MODIFY |
Summary: G protein-coupled receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007204
positive regulation of cytosolic calcium ion concentration
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cytosolic calcium ion concentration is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0007267
cell-cell signaling
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: cell-cell signaling is biologically consistent with secreted paracrine Edn1 ligand activity but is less specific than endothelin receptor signaling.
Reason: Edn1 is a secreted peptide ligand that mediates receptor-dependent communication between cells; retain the broad signaling term as non-core while preferring endothelin receptor signaling and receptor ligand terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0008217
regulation of blood pressure
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008284
positive regulation of cell population proliferation
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell population proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0009410
response to xenobiotic stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to xenobiotic stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010193
response to ozone
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to ozone is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010460
positive regulation of heart rate
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of heart rate is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
PMID:23933587
Edn1 and Ednra knock-out mice demonstrate abnormalities in pharyngeal arch artery patterning
|
|
GO:0010613
positive regulation of cardiac muscle hypertrophy
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cardiac muscle hypertrophy is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010629
negative regulation of gene expression
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of gene expression is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0014823
response to activity
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to activity is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0014824
artery smooth muscle contraction
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: artery smooth muscle contraction is a direct vascular output of endothelin-1 receptor signaling.
Reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in vascular smooth muscle drives vasoconstriction through PLC/calcium signaling, making this term consistent with the curated vascular contraction function.
Supporting Evidence:
file:mouse/Edn1/Edn1-deep-research-falcon.md
ETA (EDNRA/ETAR): classically enriched on vascular smooth muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and growth/remodeling programs.
|
|
GO:0014826
vein smooth muscle contraction
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: vein smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0019722
calcium-mediated signaling
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: calcium-mediated signaling is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0023019
signal transduction involved in regulation of gene expression
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: signal transduction involved in regulation of gene expression is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030072
peptide hormone secretion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: peptide hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030185
nitric oxide transport
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: nitric oxide transport is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030335
positive regulation of cell migration
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell migration is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0031707
endothelin A receptor binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: endothelin A receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETA/EDNRA receptors, supporting endothelin A receptor binding.
|
|
GO:0031708
endothelin B receptor binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: endothelin B receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETB/EDNRB receptors, supporting endothelin B receptor binding.
|
|
GO:0032308
positive regulation of prostaglandin secretion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of prostaglandin secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0032496
response to lipopolysaccharide
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to lipopolysaccharide is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0033093
Weibel-Palade body
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: Weibel-Palade body localization reflects endothelial regulated storage/secretion of ET-1 precursor-processing components.
Reason: This supports regulated endothelial storage and secretion of ET-1, but remains a localization/trafficking context rather than the core ligand signaling role.
Supporting Evidence:
file:mouse/Edn1/Edn1-deep-research-falcon.md
ET-1 precursors and processing components can be stored in endothelial secretory vesicles, particularly Weibel-Palade bodies, with reported co-localization of pro-ET-1 and ECE-1.
|
|
GO:0033574
response to testosterone
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to testosterone is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0034392
negative regulation of smooth muscle cell apoptotic process
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of smooth muscle cell apoptotic process is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0034696
response to prostaglandin F
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to prostaglandin F is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0035094
response to nicotine
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to nicotine is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0035556
intracellular signal transduction
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: intracellular signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0035994
response to muscle stretch
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to muscle stretch is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0042045
epithelial fluid transport
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: epithelial fluid transport is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0042482
positive regulation of odontogenesis
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of odontogenesis is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0042554
superoxide anion generation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: superoxide anion generation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0043200
response to amino acid
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to amino acid is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0043410
positive regulation of MAPK cascade
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of MAPK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0043491
phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: phosphatidylinositol 3-kinase/protein kinase B signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0044321
response to leptin
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to leptin is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045178
basal part of cell
|
IEA
GO_REF:0000107 |
UNDECIDED |
Summary: The local evidence supports Edn1 as a secreted ligand but does not verify this specific basal-cell localization.
Reason: The generic secreted-ligand evidence and Weibel-Palade storage model do not establish a basal part of cell annotation for Edn1.
|
|
GO:0045793
positive regulation of cell size
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell size is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045840
positive regulation of mitotic nuclear division
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of mitotic nuclear division is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000120 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045987
positive regulation of smooth muscle contraction
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: positive regulation of smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon identifies ET-1 as a potent vasoconstrictor whose ETA signaling in vascular smooth muscle promotes sustained contraction.
|
|
GO:0046330
positive regulation of JNK cascade
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of JNK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0046887
positive regulation of hormone secretion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0046888
negative regulation of hormone secretion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0048237
rough endoplasmic reticulum lumen
|
IEA
GO_REF:0000107 |
UNDECIDED |
Summary: The local evidence supports Edn1 as a secreted peptide precursor, but does not verify a rough endoplasmic reticulum lumen localization.
Reason: Secretory-protein biology alone is not enough to retain this specific automated cellular-component annotation without direct localization evidence.
|
|
GO:0048661
positive regulation of smooth muscle cell proliferation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of smooth muscle cell proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0050850
positive regulation of calcium-mediated signaling
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of calcium-mediated signaling is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0051248
negative regulation of protein metabolic process
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of protein metabolic process is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0051899
membrane depolarization
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: membrane depolarization is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0060137
maternal process involved in parturition
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: maternal process involved in parturition is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0060298
positive regulation of sarcomere organization
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of sarcomere organization is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0061051
positive regulation of cell growth involved in cardiac muscle cell development
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell growth involved in cardiac muscle cell development is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
PMID:23933587
Edn1/Ednra signaling is involved in pharyngeal artery development by controlling the fate of neural crest cells
|
|
GO:0070301
cellular response to hydrogen peroxide
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to hydrogen peroxide is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071277
cellular response to calcium ion
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to calcium ion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071346
cellular response to type II interferon
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to type II interferon is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071347
cellular response to interleukin-1
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to interleukin-1 is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071356
cellular response to tumor necrosis factor
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to tumor necrosis factor is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071375
cellular response to peptide hormone stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to peptide hormone stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071385
cellular response to glucocorticoid stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to glucocorticoid stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071389
cellular response to mineralocorticoid stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to mineralocorticoid stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071398
cellular response to fatty acid
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to fatty acid is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071456
cellular response to hypoxia
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to hypoxia is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071466
cellular response to xenobiotic stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to xenobiotic stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071548
response to dexamethasone
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to dexamethasone is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071559
response to transforming growth factor beta
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to transforming growth factor beta is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0071560
cellular response to transforming growth factor beta stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to transforming growth factor beta stimulus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0086100
endothelin receptor signaling pathway
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: endothelin receptor signaling pathway is biologically consistent with the curated synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes the canonical endothelin receptor pathway: ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream signaling.
|
|
GO:0090023
positive regulation of neutrophil chemotaxis
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neutrophil chemotaxis is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0097237
cellular response to toxic substance
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular response to toxic substance is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0141156
cAMP/PKA signal transduction
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cAMP/PKA signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0160195
negative regulation of phospholipase C/protein kinase C signal transduction
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of phospholipase C/protein kinase C signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1901224
positive regulation of non-canonical NF-kappaB signal transduction
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of non-canonical NF-kappaB signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1902074
response to salt
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to salt is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1904707
positive regulation of vascular associated smooth muscle cell proliferation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of vascular associated smooth muscle cell proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0003100
regulation of systemic arterial blood pressure by endothelin
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: regulation of systemic arterial blood pressure by endothelin is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes ET-1 as a central regulator of vascular tone and blood pressure through receptor-specific endothelin signaling.
|
|
GO:0005125
cytokine activity
|
ISO
GO_REF:0000119 |
MODIFY |
Summary: cytokine activity captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than receptor ligand activity for this gene. Replace with receptor ligand activity to align the annotation with the reviewed evidence.
Proposed replacements:
receptor ligand activity
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0005179
hormone activity
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: hormone activity is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon describes Edn1 as encoding a secreted peptide hormone precursor that yields mature endothelin-1, supporting hormone/receptor ligand activity.
|
|
GO:0005615
extracellular space
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0005737
cytoplasm
|
ISO
GO_REF:0000119 |
REMOVE |
Summary: cytoplasm is not supported as an appropriate annotation for Edn1 after review of the available mouse evidence.
Reason: The term appears to reflect either an unsupported transfer, a paralog/family overreach, or a localization/process inconsistent with the curated Edn1 biology.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0007166
cell surface receptor signaling pathway
|
ISO
GO_REF:0000119 |
MODIFY |
Summary: cell surface receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007186
G protein-coupled receptor signaling pathway
|
ISO
GO_REF:0000119 |
MODIFY |
Summary: G protein-coupled receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007267
cell-cell signaling
|
ISO
GO_REF:0000119 |
KEEP AS NON CORE |
Summary: cell-cell signaling is biologically consistent with secreted paracrine Edn1 ligand activity but is less specific than endothelin receptor signaling.
Reason: Edn1 is a secreted peptide ligand that mediates receptor-dependent communication between cells; retain the broad signaling term as non-core while preferring endothelin receptor signaling and receptor ligand terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0008284
positive regulation of cell population proliferation
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell population proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010460
positive regulation of heart rate
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of heart rate is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
PMID:23933587
controlling the fate of neural crest cells through a Dlx5/Dlx6-independent mechanism
|
|
GO:0010613
positive regulation of cardiac muscle hypertrophy
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cardiac muscle hypertrophy is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010629
negative regulation of gene expression
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of gene expression is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0014824
artery smooth muscle contraction
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: artery smooth muscle contraction is a direct vascular output of endothelin-1 receptor signaling.
Reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in vascular smooth muscle drives vasoconstriction through PLC/calcium signaling, making this term consistent with the curated vascular contraction function.
Supporting Evidence:
file:mouse/Edn1/Edn1-deep-research-falcon.md
ETA (EDNRA/ETAR): classically enriched on vascular smooth muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and growth/remodeling programs.
|
|
GO:0014826
vein smooth muscle contraction
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: vein smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0019722
calcium-mediated signaling
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: calcium-mediated signaling is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0023019
signal transduction involved in regulation of gene expression
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: signal transduction involved in regulation of gene expression is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030072
peptide hormone secretion
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: peptide hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030185
nitric oxide transport
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: nitric oxide transport is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0030335
positive regulation of cell migration
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell migration is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0031394
positive regulation of prostaglandin biosynthetic process
|
ISO
GO_REF:0000119 |
KEEP AS NON CORE |
Summary: positive regulation of prostaglandin biosynthetic process is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0031707
endothelin A receptor binding
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: endothelin A receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETA/EDNRA receptors, supporting endothelin A receptor binding.
|
|
GO:0031708
endothelin B receptor binding
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: endothelin B receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETB/EDNRB receptors, supporting endothelin B receptor binding.
|
|
GO:0042310
vasoconstriction
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: vasoconstriction is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0043410
positive regulation of MAPK cascade
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of MAPK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0043491
phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: phosphatidylinositol 3-kinase/protein kinase B signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045793
positive regulation of cell size
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell size is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045840
positive regulation of mitotic nuclear division
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of mitotic nuclear division is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0046330
positive regulation of JNK cascade
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of JNK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0046887
positive regulation of hormone secretion
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0048661
positive regulation of smooth muscle cell proliferation
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of smooth muscle cell proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0050850
positive regulation of calcium-mediated signaling
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of calcium-mediated signaling is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0051248
negative regulation of protein metabolic process
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of protein metabolic process is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0060298
positive regulation of sarcomere organization
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of sarcomere organization is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0061051
positive regulation of cell growth involved in cardiac muscle cell development
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell growth involved in cardiac muscle cell development is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
PMID:15110048
ET-1/EdnrA signaling may contribute to the dorsoventral axis patterning of the branchial arch system
|
|
GO:0070101
positive regulation of chemokine-mediated signaling pathway
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of chemokine-mediated signaling pathway is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0086100
endothelin receptor signaling pathway
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: endothelin receptor signaling pathway is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes the canonical endothelin receptor pathway: ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream signaling.
|
|
GO:0160195
negative regulation of phospholipase C/protein kinase C signal transduction
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of phospholipase C/protein kinase C signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0001821
histamine secretion
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: histamine secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0005615
extracellular space
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0007204
positive regulation of cytosolic calcium ion concentration
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cytosolic calcium ion concentration is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0008217
regulation of blood pressure
|
ISO
GO_REF:0000096 |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008284
positive regulation of cell population proliferation
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell population proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0010629
negative regulation of gene expression
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of gene expression is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0014824
artery smooth muscle contraction
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: artery smooth muscle contraction is a direct vascular output of endothelin-1 receptor signaling.
Reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in vascular smooth muscle drives vasoconstriction through PLC/calcium signaling, making this term consistent with the curated vascular contraction function.
Supporting Evidence:
file:mouse/Edn1/Edn1-deep-research-falcon.md
ETA (EDNRA/ETAR): classically enriched on vascular smooth muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and growth/remodeling programs.
|
|
GO:0031707
endothelin A receptor binding
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: endothelin A receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETA/EDNRA receptors, supporting endothelin A receptor binding.
|
|
GO:0031708
endothelin B receptor binding
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: endothelin B receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETB/EDNRB receptors, supporting endothelin B receptor binding.
|
|
GO:0032308
positive regulation of prostaglandin secretion
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of prostaglandin secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0033093
Weibel-Palade body
|
ISO
GO_REF:0000096 |
KEEP AS NON CORE |
Summary: Weibel-Palade body localization reflects endothelial regulated storage/secretion of ET-1 precursor-processing components.
Reason: This supports regulated endothelial storage and secretion of ET-1, but remains a localization/trafficking context rather than the core ligand signaling role.
Supporting Evidence:
file:mouse/Edn1/Edn1-deep-research-falcon.md
ET-1 precursors and processing components can be stored in endothelial secretory vesicles, particularly Weibel-Palade bodies, with reported co-localization of pro-ET-1 and ECE-1.
|
|
GO:0034392
negative regulation of smooth muscle cell apoptotic process
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of smooth muscle cell apoptotic process is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0035556
intracellular signal transduction
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: intracellular signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0042045
epithelial fluid transport
|
ISO
GO_REF:0000096 |
KEEP AS NON CORE |
Summary: epithelial fluid transport is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0042310
vasoconstriction
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: vasoconstriction is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0042482
positive regulation of odontogenesis
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of odontogenesis is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0042554
superoxide anion generation
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: superoxide anion generation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045178
basal part of cell
|
ISO
GO_REF:0000096 |
UNDECIDED |
Summary: The local evidence supports Edn1 as a secreted ligand but does not verify this specific basal-cell localization.
Reason: The generic secreted-ligand evidence and Weibel-Palade storage model do not establish a basal part of cell annotation for Edn1.
|
|
GO:0045944
positive regulation of transcription by RNA polymerase II
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0045987
positive regulation of smooth muscle contraction
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: positive regulation of smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon identifies ET-1 as a potent vasoconstrictor whose ETA signaling in vascular smooth muscle promotes sustained contraction.
|
|
GO:0046888
negative regulation of hormone secretion
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of hormone secretion is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0048237
rough endoplasmic reticulum lumen
|
ISO
GO_REF:0000096 |
UNDECIDED |
Summary: The local evidence supports Edn1 as a secreted peptide precursor, but does not verify a rough endoplasmic reticulum lumen localization.
Reason: Secretory-protein biology alone is not enough to retain this specific automated cellular-component annotation without direct localization evidence.
|
|
GO:0051899
membrane depolarization
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: membrane depolarization is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0090023
positive regulation of neutrophil chemotaxis
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neutrophil chemotaxis is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1901224
positive regulation of non-canonical NF-kappaB signal transduction
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of non-canonical NF-kappaB signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1904707
positive regulation of vascular associated smooth muscle cell proliferation
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of vascular associated smooth muscle cell proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1900182
positive regulation of protein localization to nucleus
|
IMP
PMID:21525433 Endothelin-1 contributes to increased NFATc3 activation by c... |
MARK AS OVER ANNOTATED |
Summary: positive regulation of protein localization to nucleus is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:1905653
positive regulation of artery morphogenesis
|
IMP
PMID:20495147 NFATc3 contributes to intermittent hypoxia-induced arterial ... |
KEEP AS NON CORE |
Summary: positive regulation of artery morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:9671575
dHAND and the related gene, eHAND, are downregulated in the branchial and aortic arches of Edn1-null embryos.
|
|
GO:0005615
extracellular space
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:24722437).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0048018
receptor ligand activity
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
ACCEPT |
Summary: receptor ligand activity is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:24722437).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0086100
endothelin receptor signaling pathway
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
ACCEPT |
Summary: endothelin receptor signaling pathway is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:24722437).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes the canonical endothelin receptor pathway: ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream signaling.
|
|
GO:0003015
heart process
|
IMP
PMID:25197047 Essential role of sympathetic endothelin A receptors for adv... |
KEEP AS NON CORE |
Summary: heart process is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:8152482
have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs.
|
|
GO:0003015
heart process
|
IMP
PMID:31219639 Cdc42 activation by endothelin regulates neural crest cell m... |
KEEP AS NON CORE |
Summary: heart process is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:23933587
Edn1 and Ednra knock-out mice demonstrate abnormalities in pharyngeal arch artery patterning
|
|
GO:0007411
axon guidance
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: axon guidance is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0008217
regulation of blood pressure
|
IMP
PMID:16868309 Collecting duct-specific knockout of the endothelin B recept... |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0048675
axon extension
|
IDA
PMID:18401410 Endothelins are vascular-derived axonal guidance cues for de... |
KEEP AS NON CORE |
Summary: axon extension is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0000165
MAPK cascade
|
IDA
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
MARK AS OVER ANNOTATED |
Summary: MAPK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0000165
MAPK cascade
|
IMP
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
MARK AS OVER ANNOTATED |
Summary: MAPK cascade is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0044751
cellular response to human chorionic gonadotropin stimulus
|
IDA
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
KEEP AS NON CORE |
Summary: cellular response to human chorionic gonadotropin stimulus is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:19111534
The stimulatory effect of hCG on GVBD was partially blocked by the same antagonist.
|
|
GO:0071372
cellular response to follicle-stimulating hormone stimulus
|
IDA
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
UNDECIDED |
Summary: The cited oocyte paper supports LH/hCG-responsive Edn1 signaling, but does not directly establish a follicle-stimulating hormone response.
Reason: Retaining this FSH-specific annotation requires evidence beyond the LH/hCG and ET-1/EDNRA oocyte-maturation results in the available citation.
|
|
GO:0071373
cellular response to luteinizing hormone stimulus
|
IDA
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
KEEP AS NON CORE |
Summary: cellular response to luteinizing hormone stimulus is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:19111534
in response to the preovulatory luteinizing hormone (LH)/human chorionic gonadotropin (hCG) stimulation.
|
|
GO:1903537
meiotic cell cycle process involved in oocyte maturation
|
IDA
PMID:19111534 Paracrine regulation of the resumption of oocyte meiosis by ... |
KEEP AS NON CORE |
Summary: meiotic cell cycle process involved in oocyte maturation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:19111534
treatment with endothelin-1 promoted oocyte GVBD.
|
|
GO:0010467
gene expression
|
IDA
PMID:20929948 Endothelin receptor type A expression defines a distinct car... |
KEEP AS NON CORE |
Summary: gene expression is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0070371
ERK1 and ERK2 cascade
|
IDA
PMID:20929948 Endothelin receptor type A expression defines a distinct car... |
KEEP AS NON CORE |
Summary: ERK1 and ERK2 cascade is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008217
regulation of blood pressure
|
IMP
PMID:20516397 Low blood pressure in endothelial cell-specific endothelin 1... |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0010467
gene expression
|
IMP
PMID:20516397 Low blood pressure in endothelial cell-specific endothelin 1... |
KEEP AS NON CORE |
Summary: gene expression is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0001569
branching involved in blood vessel morphogenesis
|
IMP
PMID:23933587 Endothelin regulates neural crest deployment and fate to for... |
KEEP AS NON CORE |
Summary: branching involved in blood vessel morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:23933587
Edn1/Ednra signaling is involved in pharyngeal artery development by controlling the fate of neural crest cells
|
|
GO:0014033
neural crest cell differentiation
|
IMP
PMID:23933587 Endothelin regulates neural crest deployment and fate to for... |
KEEP AS NON CORE |
Summary: neural crest cell differentiation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:23933587
controlling the fate of neural crest cells through a Dlx5/Dlx6-independent mechanism
|
|
GO:0014034
neural crest cell fate commitment
|
IMP
PMID:23933587 Endothelin regulates neural crest deployment and fate to for... |
KEEP AS NON CORE |
Summary: neural crest cell fate commitment is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:23933587
Edn1 and Ednra knock-out mice demonstrate abnormalities in pharyngeal arch artery patterning
|
|
GO:0061626
pharyngeal arch artery morphogenesis
|
IMP
PMID:23933587 Endothelin regulates neural crest deployment and fate to for... |
KEEP AS NON CORE |
Summary: pharyngeal arch artery morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:23933587
Edn1 and Ednra knock-out mice demonstrate abnormalities in pharyngeal arch artery patterning
|
|
GO:0070294
renal sodium ion absorption
|
IDA
PMID:23698114 Endothelin-1 inhibits sodium reabsorption by ET(A) and ET(B)... |
KEEP AS NON CORE |
Summary: renal sodium ion absorption is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0007005
mitochondrion organization
|
IDA
PMID:27899487 Glomerular Endothelial Mitochondrial Dysfunction Is Essentia... |
KEEP AS NON CORE |
Summary: mitochondrion organization is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0030878
thyroid gland development
|
IMP
PMID:26506449 Postotic and preotic cranial neural crest cells differently ... |
KEEP AS NON CORE |
Summary: thyroid gland development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:15110048
ET-1/EdnrA signaling may contribute to the dorsoventral axis patterning of the branchial arch system
|
|
GO:0001975
response to amphetamine
|
IMP
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
MARK AS OVER ANNOTATED |
Summary: response to amphetamine is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0003253
cardiac neural crest cell migration involved in outflow tract morphogenesis
|
IDA
PMID:31219639 Cdc42 activation by endothelin regulates neural crest cell m... |
KEEP AS NON CORE |
Summary: cardiac neural crest cell migration involved in outflow tract morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:31219639
Cdc42 is part of the signaling pathway activated by endothelin specifically in OFT CNCC to control their migration.
|
|
GO:0003357
noradrenergic neuron differentiation
|
IMP
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
KEEP AS NON CORE |
Summary: noradrenergic neuron differentiation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0006468
protein phosphorylation
|
IDA
PMID:31219639 Cdc42 activation by endothelin regulates neural crest cell m... |
MODIFY |
Summary: protein phosphorylation captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007507
heart development
|
IMP
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
KEEP AS NON CORE |
Summary: heart development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0010467
gene expression
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: gene expression is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0031175
neuron projection development
|
IDA
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
KEEP AS NON CORE |
Summary: neuron projection development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0035050
embryonic heart tube development
|
IMP
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
KEEP AS NON CORE |
Summary: embryonic heart tube development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0035050
embryonic heart tube development
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: embryonic heart tube development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0035050
embryonic heart tube development
|
IMP
PMID:31219639 Cdc42 activation by endothelin regulates neural crest cell m... |
KEEP AS NON CORE |
Summary: embryonic heart tube development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0060385
axonogenesis involved in innervation
|
IMP
PMID:24875861 Venous endothelin guides sympathetic innervation of the deve... |
KEEP AS NON CORE |
Summary: axonogenesis involved in innervation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0060385
axonogenesis involved in innervation
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: axonogenesis involved in innervation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0071526
semaphorin-plexin signaling pathway
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: semaphorin-plexin signaling pathway is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0086100
endothelin receptor signaling pathway
|
IDA
PMID:31219639 Cdc42 activation by endothelin regulates neural crest cell m... |
ACCEPT |
Summary: endothelin receptor signaling pathway is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:31219639).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes the canonical endothelin receptor pathway: ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream signaling.
|
|
GO:0097492
sympathetic neuron axon guidance
|
IMP
PMID:30735130 Venous endothelin modulates responsiveness of cardiac sympat... |
KEEP AS NON CORE |
Summary: sympathetic neuron axon guidance is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart."
|
|
GO:0003094
glomerular filtration
|
IDA
PMID:31402170 Endothelin receptor-A mediates degradation of the glomerular... |
KEEP AS NON CORE |
Summary: glomerular filtration is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0006366
transcription by RNA polymerase II
|
IDA
PMID:27026367 Endothelin-1 Induces Proteinuria by Heparanase-Mediated Disr... |
MARK AS OVER ANNOTATED |
Summary: transcription by RNA polymerase II is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0006874
intracellular calcium ion homeostasis
|
ISO
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
KEEP AS NON CORE |
Summary: intracellular calcium ion homeostasis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0006874
intracellular calcium ion homeostasis
|
IDA
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
KEEP AS NON CORE |
Summary: intracellular calcium ion homeostasis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0010467
gene expression
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
KEEP AS NON CORE |
Summary: gene expression is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0060070
canonical Wnt signaling pathway
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
KEEP AS NON CORE |
Summary: canonical Wnt signaling pathway is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0070301
cellular response to hydrogen peroxide
|
ISO
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: cellular response to hydrogen peroxide is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0070588
calcium ion transmembrane transport
|
IDA
PMID:24722437 Direct action of endothelin-1 on podocytes promotes diabetic... |
KEEP AS NON CORE |
Summary: calcium ion transmembrane transport is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0072011
glomerular endothelium development
|
IDA
PMID:31402170 Endothelin receptor-A mediates degradation of the glomerular... |
KEEP AS NON CORE |
Summary: glomerular endothelium development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0072112
podocyte differentiation
|
IDA
PMID:31402170 Endothelin receptor-A mediates degradation of the glomerular... |
KEEP AS NON CORE |
Summary: podocyte differentiation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.
|
|
GO:0097237
cellular response to toxic substance
|
ISO
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: cellular response to toxic substance is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0097237
cellular response to toxic substance
|
IDA
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: cellular response to toxic substance is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0097237
cellular response to toxic substance
|
IMP
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: cellular response to toxic substance is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0141156
cAMP/PKA signal transduction
|
ISO
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: cAMP/PKA signal transduction is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:2001259
positive regulation of cation channel activity
|
ISO
PMID:30990108 ET(A)R and protein kinase A pathway mediate ET-1 sensitizati... |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cation channel activity is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0031583
phospholipase D-activating G protein-coupled receptor signaling pathway
|
IDA
PMID:8978712 Endothelin stimulates phospholipase D in striatal astrocytes... |
KEEP AS NON CORE |
Summary: phospholipase D-activating G protein-coupled receptor signaling pathway is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
|
|
GO:0009953
dorsal/ventral pattern formation
|
IMP
PMID:15110048 Endothelin-1 regulates the dorsoventral branchial arch patte... |
KEEP AS NON CORE |
Summary: dorsal/ventral pattern formation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:15110048
ET-1/EdnrA signaling may contribute to the dorsoventral axis patterning of the branchial arch system
|
|
GO:0086100
endothelin receptor signaling pathway
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: endothelin receptor signaling pathway is biologically consistent with the curated synthesis for Edn1 and is supported by ISS evidence (GO_REF:0000024).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon summarizes the canonical endothelin receptor pathway: ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream signaling.
|
|
GO:0010827
regulation of D-glucose transmembrane transport
|
IDA
PMID:11546805 beta -Arrestin-mediated recruitment of the Src family kinase... |
KEEP AS NON CORE |
Summary: regulation of D-glucose transmembrane transport is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007193
adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
|
IGI
PMID:15632412 Collecting duct-specific knockout of endothelin-1 alters vas... |
KEEP AS NON CORE |
Summary: adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
|
|
GO:0007193
adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
|
IDA
PMID:2542249 A novel vasoactive peptide endothelin stimulates mitogenesis... |
KEEP AS NON CORE |
Summary: adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
|
|
GO:0035810
positive regulation of urine volume
|
IMP
PMID:15632412 Collecting duct-specific knockout of endothelin-1 alters vas... |
KEEP AS NON CORE |
Summary: positive regulation of urine volume is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0035810
positive regulation of urine volume
|
IGI
PMID:15632412 Collecting duct-specific knockout of endothelin-1 alters vas... |
KEEP AS NON CORE |
Summary: positive regulation of urine volume is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0035815
positive regulation of renal sodium excretion
|
IMP
PMID:15314687 Collecting duct-specific knockout of endothelin-1 causes hyp... |
KEEP AS NON CORE |
Summary: positive regulation of renal sodium excretion is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0006885
regulation of pH
|
IDA
PMID:11413164 Endothelin-1/endothelin-B receptor-mediated increases in NHE... |
KEEP AS NON CORE |
Summary: regulation of pH is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0001501
skeletal system development
|
IMP
PMID:8152482 Elevated blood pressure and craniofacial abnormalities in mi... |
KEEP AS NON CORE |
Summary: skeletal system development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0001569
branching involved in blood vessel morphogenesis
|
IMP
PMID:7615798 Aortic arch malformations and ventricular septal defect in m... |
KEEP AS NON CORE |
Summary: branching involved in blood vessel morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0001666
response to hypoxia
|
IMP
PMID:8764295 Impaired ventilatory responses to hypoxia and hypercapnia in... |
KEEP AS NON CORE |
Summary: response to hypoxia is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0005102
signaling receptor binding
|
IDA
PMID:2542249 A novel vasoactive peptide endothelin stimulates mitogenesis... |
MODIFY |
Summary: signaling receptor binding captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than receptor ligand activity for this gene. Replace with receptor ligand activity to align the annotation with the reviewed evidence.
Proposed replacements:
receptor ligand activity
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0005102
signaling receptor binding
|
IDA
PMID:8680799 Developmental changes in cerebellar endothelin-1 receptors i... |
MODIFY |
Summary: signaling receptor binding captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than receptor ligand activity for this gene. Replace with receptor ligand activity to align the annotation with the reviewed evidence.
Proposed replacements:
receptor ligand activity
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
|
|
GO:0007200
phospholipase C-activating G protein-coupled receptor signaling pathway
|
IDA
PMID:2542249 A novel vasoactive peptide endothelin stimulates mitogenesis... |
MODIFY |
Summary: phospholipase C-activating G protein-coupled receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol."
|
|
GO:0007507
heart development
|
IMP
PMID:7615798 Aortic arch malformations and ventricular septal defect in m... |
KEEP AS NON CORE |
Summary: heart development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0008217
regulation of blood pressure
|
IMP
PMID:8152482 Elevated blood pressure and craniofacial abnormalities in mi... |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008284
positive regulation of cell population proliferation
|
IDA
PMID:2542249 A novel vasoactive peptide endothelin stimulates mitogenesis... |
MARK AS OVER ANNOTATED |
Summary: positive regulation of cell population proliferation is related to reported Edn1 biology only as a broad downstream readout or generic interaction term.
Reason: This overstates the direct role of the gene product; the curated model is better captured by the specific receptor/ligand, pathway, and supported non-core phenotype terms.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0014032
neural crest cell development
|
IMP
PMID:9671575 A signaling cascade involving endothelin-1, dHAND and msx1 r... |
KEEP AS NON CORE |
Summary: neural crest cell development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
PMID:9671575
A signaling cascade involving endothelin-1, dHAND and msx1 regulates development of neural-crest-derived branchial arch mesenchyme.
|
|
GO:0042474
middle ear morphogenesis
|
IMP
PMID:8152482 Elevated blood pressure and craniofacial abnormalities in mi... |
UNDECIDED |
Summary: The available local evidence supports pharyngeal-arch-derived craniofacial abnormalities but does not directly verify middle ear morphogenesis.
Reason: Retaining this specific developmental annotation requires direct middle-ear evidence rather than generic pharyngeal arch or cardiovascular phenotype support.
|
|
GO:0043179
rhythmic excitation
|
IMP
PMID:8764295 Impaired ventilatory responses to hypoxia and hypercapnia in... |
KEEP AS NON CORE |
Summary: rhythmic excitation is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0045987
positive regulation of smooth muscle contraction
|
IDA
PMID:8010105 Effects of endothelin-1 on isolated uterine horns in estroge... |
ACCEPT |
Summary: positive regulation of smooth muscle contraction is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:8010105).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon identifies ET-1 as a potent vasoconstrictor whose ETA signaling in vascular smooth muscle promotes sustained contraction.
|
|
GO:0048514
blood vessel morphogenesis
|
IMP
PMID:7615798 Aortic arch malformations and ventricular septal defect in m... |
KEEP AS NON CORE |
Summary: blood vessel morphogenesis is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0051216
cartilage development
|
IMP
PMID:8152482 Elevated blood pressure and craniofacial abnormalities in mi... |
KEEP AS NON CORE |
Summary: cartilage development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0001701
in utero embryonic development
|
IMP
PMID:15327783 Temporal requirement of signaling cascade involving endothel... |
KEEP AS NON CORE |
Summary: in utero embryonic development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0005615
extracellular space
|
IDA
PMID:15314687 Collecting duct-specific knockout of endothelin-1 causes hyp... |
ACCEPT |
Summary: extracellular space is biologically consistent with the curated synthesis for Edn1 and is supported by IDA evidence (PMID:15314687).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon states that ET-1 functions as an extracellular ligand produced by endothelial and epithelial cells.
|
|
GO:0007589
body fluid secretion
|
IMP
PMID:15314687 Collecting duct-specific knockout of endothelin-1 causes hyp... |
KEEP AS NON CORE |
Summary: body fluid secretion is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008217
regulation of blood pressure
|
IMP
PMID:15314687 Collecting duct-specific knockout of endothelin-1 causes hyp... |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0014032
neural crest cell development
|
IMP
PMID:15327783 Temporal requirement of signaling cascade involving endothel... |
KEEP AS NON CORE |
Summary: neural crest cell development is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract."
|
|
GO:0031707
endothelin A receptor binding
|
IPI
PMID:9449664 Cranial and cardiac neural crest defects in endothelin-A rec... |
ACCEPT |
Summary: endothelin A receptor binding is biologically consistent with the curated synthesis for Edn1 and is supported by IPI evidence (PMID:9449664).
Reason: The term matches a direct molecular function, pathway, or location/physiological output of Edn1; it is specific enough to retain without replacement.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB.
file:mouse/Edn1/Edn1-deep-research-falcon.md
Falcon reports that mature ET-1 signals through ETA/EDNRA receptors, supporting endothelin A receptor binding.
|
|
GO:0005515
protein binding
|
IPI
PMID:12441350 The first inner loop of endothelin receptor type B is necess... |
REMOVE |
Summary: protein binding is not supported as an appropriate annotation for Edn1 after review of the available mouse evidence.
Reason: The term appears to reflect either an unsupported transfer, a paralog/family overreach, or a localization/process inconsistent with the curated Edn1 biology.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation.
|
|
GO:0007585
respiratory gaseous exchange by respiratory system
|
IMP
PMID:10626068 Endothelin in the central control of cardiovascular and resp... |
KEEP AS NON CORE |
Summary: respiratory gaseous exchange by respiratory system is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0008217
regulation of blood pressure
|
IMP
PMID:10626068 Endothelin in the central control of cardiovascular and resp... |
KEEP AS NON CORE |
Summary: regulation of blood pressure is supported for Edn1 in a tissue, developmental, trafficking, or disease-model context, but it is not the core molecular role.
Reason: This annotation captures a real downstream or context-specific consequence of Edn1 activity. It should be retained as non-core so it does not obscure the primary receptor/ligand signaling function.
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
|
GO:0007186
G protein-coupled receptor signaling pathway
|
TAS
PMID:11546805 beta -Arrestin-mediated recruitment of the Src family kinase... |
MODIFY |
Summary: G protein-coupled receptor signaling pathway captures the right general biology for Edn1, but a more specific GO term is available.
Reason: The current term is too broad or less precise than endothelin receptor signaling pathway for this gene. Replace with endothelin receptor signaling pathway to align the annotation with the reviewed evidence.
Proposed replacements:
endothelin receptor signaling pathway
Supporting Evidence:
file:mouse/Edn1/Edn1-notes.md
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure."
|
Q: For Edn1, should developmental axon-guidance and neural-crest roles be grouped under endothelin receptor signaling rather than maintained as multiple granular phenotype-like GO process annotations?
Experiment: Compare Ednra- and Ednrb-dependent responses to mature ET-1 in vascular smooth muscle, podocytes, and sympathetic neurons using receptor-selective antagonists or conditional receptor knockouts.
Hypothesis: Different Edn1 GO process annotations reflect receptor- and tissue-specific deployment of the same secreted ligand.
Type: receptor-specific ligand response assay
provider: falcon
model: Edison Scientific Literature
cached: false
start_time: '2026-05-03T13:45:34.360946'
end_time: '2026-05-03T14:01:45.427654'
duration_seconds: 971.07
template_file: templates/gene_research_go_focused.md
template_variables:
organism: mouse
gene_id: Edn1
gene_symbol: Edn1
uniprot_accession: P22387
protein_description: 'RecName: Full=Endothelin-1; Short=ET-1; AltName: Full=Preproendothelin-1;
Short=PPET1; Contains: RecName: Full=Big endothelin-1; Flags: Precursor;'
gene_info: Name=Edn1;
organism_full: Mus musculus (Mouse).
protein_family: Belongs to the endothelin/sarafotoxin family.
protein_domains: Endothelin. (IPR020475); Endothelin_toxin_CS. (IPR019764); Endothln-like_toxin.
(IPR001928); Endothelin (PF00322)
provider_config:
timeout: 600
max_retries: 3
parameters:
allowed_domains: []
temperature: 0.1
citation_count: 42
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'Edn1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene Edn1 (gene ID: Edn1, UniProt: P22387) in mouse.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'Edn1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene Edn1 (gene ID: Edn1, UniProt: P22387) in mouse.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The requested target is mouse (Mus musculus) Edn1, UniProt P22387, which encodes the Endothelin-1 (ET-1) precursor (preproendothelin-1). The literature retrieved consistently defines Edn1/EDN1 as encoding preproendothelin-1, processed to big endothelin-1 and then the mature 21-aa ET-1, a secreted signaling peptide acting primarily through ETA/ETB receptors; this matches the UniProt description and endothelin/sarafotoxin family membership. (schiffrin2024endothelinsystemin pages 1-2, schiffrin2025endothelinantagonistsfor pages 1-2, patel2024comprehensiveanalysisof pages 1-2)
Edn1 encodes a secreted peptide hormone precursor that yields the mature vasoactive peptide endothelin-1 (ET-1) (21 amino acids). ET-1 is widely regarded as one of the most potent endogenous vasoconstrictors, but also functions as a developmental morphogen in specific embryonic contexts. (schiffrin2024endothelinsystemin pages 1-2, clouthier2004understandingendothelin1function pages 1-2)
ET-1 is produced by stepwise proteolysis:
- The Edn1 product is synthesized as a preproendothelin-1 precursor.
- Furin/furin-like proteases cleave proendothelin to “big endothelin-1” (38–39 aa).
- Endothelin-converting enzymes (ECE-1/ECE-2) (zinc-dependent endoproteases) cleave big ET-1 to produce mature ET-1 (21 aa).
Additional proteases (e.g., MMP-2, chymase, neutral endopeptidase) can contribute to ET-1 generation or alternative intermediates in some contexts. (schiffrin2024endothelinsystemin pages 1-2, schiffrin2024endothelinsystemin pages 2-4, schiffrin2025endothelinantagonistsfor pages 1-2)
ET-1 signals primarily via two class A GPCRs:
- ETA (EDNRA/ETAR): classically enriched on vascular smooth muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and growth/remodeling programs.
- ETB (EDNRB/ETBR): enriched on endothelial cells (among other cell types); endothelial ETB can stimulate release of vasodilators (notably NO and prostacyclin) and ETB is also described as contributing to ET-1 clearance. (schiffrin2024endothelinsystemin pages 2-4, arndt2024endothelinandthe pages 2-2, prepeliuc2025theinvolvementof pages 4-6)
ET-1 functions as an extracellular ligand produced predominantly by vascular endothelial cells (also by certain epithelial cells, including in kidney). In kidney tissue, ET-1 and ECE1 protein localize in vessels and glomeruli, supporting local endothelial/glomerular production and paracrine signaling. (schiffrin2024endothelinsystemin pages 1-2, patel2024comprehensiveanalysisof media f464fe7a)
A mechanistic model of endothelial packaging is that ET-1 precursors and processing components can be stored in endothelial secretory vesicles, particularly Weibel–Palade bodies, with reported co-localization of pro-ET-1 and ECE-1; this supports regulated secretion and local processing capacity near the endothelial surface. (prepeliuc2025theinvolvementof pages 4-6)
Across authoritative sources, ET receptor activation is linked to:
- Gq/11 → PLCβ → IP3/DAG → Ca2+ mobilization and PKC activation, directly promoting VSMC contraction.
- ROS generation (e.g., via NADPH oxidase) and downstream signaling contributing to vascular remodeling.
- MAPK cascade (ras–raf–MAPK/ERK) and growth factor receptor transactivation, supporting hypertrophy and remodeling.
- Additional coupling through Gi/o, Gs, G12/13 and β-arrestin–linked signaling, providing cell-type and context-specific outputs including inflammatory transcriptional programs (e.g., NF-κB-linked). (schiffrin2024endothelinsystemin pages 2-4, prepeliuc2025theinvolvementof pages 4-6, maiza2026endothelin1inthe pages 1-2)
ET-1 is a central regulator of vasomotor tone and contributes to blood pressure regulation and vascular remodeling in physiology and disease, with receptor-specific effects (ETA largely vasoconstrictive; endothelial ETB vasodilatory via NO/prostacyclin). (schiffrin2024endothelinsystemin pages 2-4, schiffrin2025endothelinantagonistsfor pages 1-2)
In kidney, a 2024 cross-species analysis combining scRNA-seq re-analysis and immunolocalization reported that ECE1 and ET-1 are prominent in glomeruli and endothelium, and that Ece1 mRNA is enriched in endothelium; the study also highlights a key reproducibility issue: Edn1/EDN1 mRNA is often rarely detected by scRNA-seq despite clear protein immunolocalization and measurable plasma/urinary ET-1, implying transcript-level under-detection relative to peptide/protein presence. (patel2024comprehensiveanalysisof pages 1-2, patel2024comprehensiveanalysisof media f464fe7a)
A defining mouse-specific functional role of Edn1 is as a developmental signal in the pharyngeal arches:
- Ednra (ETA) is expressed in neural crest–derived ectomesenchyme.
- ET-1 (Edn1) is expressed in the arch environment, including arch epithelium/ectoderm, pharyngeal pouch endoderm, and the paraxial mesoderm-derived arch core; ECE-1 is coexpressed at key sites.
- Loss of Ednra signaling disrupts post-migratory neural crest transcriptional programs in arches: reduced/absent expression of goosecoid, Dlx-2, Dlx-3, dHAND (Hand2), eHAND, and Barx1, while some factors (e.g., Hoxa-2, Ufd1) are unaffected, indicating pathway specificity.
- Phenotypically, loss of ET-1/ETA/ECE-1 signaling causes severe craniofacial malformations and perinatal lethality (mechanical airway compromise), with mandibular and throat defects and associated cardiovascular outflow tract defects described in the developmental literature syntheses. (clouthier2000signalingpathwayscrucial pages 1-2, clouthier2010regulationoffacial pages 6-8, clouthier2010regulationoffacial pages 2-4)
A key refinement from conditional mouse genetics is that ectodermal-derived Edn1 is required for mandibular arch patterning; a study using tissue-specific Cre drivers concluded that facial patterning defects occur only when Edn1 is inactivated in ectoderm, and that critical Edn1 function occurs in a narrow developmental window around E8.5–E9.0. (tavares2012ectodermalderivedendothelin1is pages 1-2, tavares2012ectodermalderivedendothelin1is pages 2-4)
Although Edn1 is a mouse gene, the EDN1/ET-1 pathway is intensively targeted translationally; 2023–2024 sources summarize a renewed clinical focus on endothelin pathway modulation.
A 2023 cardiovascular translational review highlights expanding strategies beyond pulmonary arterial hypertension, including precision approaches using EDN1-regulatory genetics to enrich for response and new therapeutic modalities (e.g., long-acting biologics). (abraham2023currentandfuture pages 1-4, abraham2023currentandfuture pages 7-11)
Sparsentan (dual ETA/AT1 antagonist) is reported as receiving approval in 2023 for IgA nephropathy; pooled DUET phase II data in that review reported a 44.8% reduction in urine protein-to-creatinine ratio versus 18.5% with irbesartan and partial remission rates of 28.1% vs 9.4%, respectively. (abraham2023currentandfuture pages 17-20)
A key clinical limitation of endothelin receptor antagonists is fluid retention/edema; the 2023 review cites peripheral edema in 17% of pulmonary arterial hypertension patients treated with bosentan, and discusses fluid overload as a class effect relevant to clinical management and combination strategies. (abraham2023currentandfuture pages 1-4)
A 2024 human portal vein transcriptomic study (portal hypertension vs controls) provides a contemporary example of the endothelin axis appearing among top enriched pathways, supporting interest in endothelin antagonism in portal hypertension. In portal vein samples (PH n=12; controls n=9), the authors detected 9,964 genes above background and identified 2,544 differentially expressed genes (adjusted P<0.05; fold-change >1.5), with 49 enriched pathways; the endothelin pathway ranked 10th, with EDN1 up-regulated and EDNRA down-regulated (adaptive response) and EDNRB unchanged. (owen2024microarrayanalysisdemonstrates pages 1-2)
The following extracted values summarize actionable quantitative evidence spanning genetics, pharmacology, transcriptomics, and therapeutic outcomes.
- rs9349379 minor G allele frequency: 40% in the general population and 46% in the CorMicA cohort. (abraham2023currentandfuture pages 7-11)
- Sparsentan in pooled DUET phase II data: 44.8% reduction in urine protein-to-creatinine ratio vs 18.5% with irbesartan; partial remission 28.1% vs 9.4%. (abraham2023currentandfuture pages 17-20)
- Bosentan-associated peripheral edema in PAH: 17%. (abraham2023currentandfuture pages 1-4)
- Portal vein microarray study: PH n=12 vs control n=9; ~20,800 genes measured; 9,964 detected above background; 2,544 DEGs defined by adjusted P < 0.05 and fold change > 1.5, with 548 up-regulated and 1,996 down-regulated genes; 49 enriched pathways; endothelin pathway ranked 10th. (owen2024microarrayanalysisdemonstrates pages 1-2)
- Portal pressure cutoffs: normal 5-10 mmHg; HVPG >5 mmHg defines portal hypertension; HVPG >10 mmHg is associated with clinical complications. (owen2024microarrayanalysisdemonstrates pages 1-2)
- Getagozumab (GMA301): Kd ~8.7 nM, IC50 ~38 nM; monkey half-life 7-10 days; human plasma half-life ~21 days. (abraham2023currentandfuture pages 7-11)
- Mouse developmental time window for Edn1 mandibular arch patterning: E8.5-E9.0. (tavares2012ectodermalderivedendothelin1is pages 2-4)
Blockquote: This blockquote lists the main numerical findings extracted for the EDN1/Edn1 pathway, spanning genetics, therapeutics, transcriptomics, hemodynamic thresholds, pharmacology, and mouse developmental timing. It is useful as a compact reference for the most actionable quantitative evidence.
System-level view (hypertension/CKD): A 2024 Hypertension review emphasizes ET-1 as a broadly expressed mediator with receptor-specific actions across vascular and renal beds and highlights mechanistic links to ROS, MAPK signaling, hypertrophy/remodeling, and the complexity of ETA vs ETB roles (including endothelial ETB vasodilatory signaling). (schiffrin2024endothelinsystemin pages 1-2, schiffrin2024endothelinsystemin pages 2-4)
Translational state of the field (2023): A 2023 review argues that translational research over the prior ~5 years has “reignited interest” in endothelin targeting for broader cardiovascular indications, including genotype-informed trial enrichment (e.g., EDN1 regulatory locus rs9349379), dual-mechanism small molecules, and long-acting biologics such as anti-ETA monoclonal antibodies. (abraham2023currentandfuture pages 1-4, abraham2023currentandfuture pages 7-11)
Experimental rigor note (2024 kidney analysis): A 2024 kidney-focused analysis warns that mRNA detection (scRNA-seq) may under-represent Edn1/EDN1 relative to protein localization and measurable peptide levels, recommending multi-modal validation (protein immunolocalization plus transcriptomics) for robust functional inference. (patel2024comprehensiveanalysisof pages 1-2)
| Aspect | Key points | Representative recent sources with year and URL | Citation IDs |
|---|---|---|---|
| Gene product | Mouse Edn1 (UniProt P22387) encodes preproendothelin-1 / endothelin-1 precursor, yielding the mature 21-aa ET-1 peptide, a potent vasoactive signaling molecule. | Schiffrin & Pollock, 2024, Hypertension — https://doi.org/10.1161/hypertensionaha.123.21716; Patel et al., 2024, Bioscience Reports — https://doi.org/10.1042/bsr20240768 | (schiffrin2024endothelinsystemin pages 1-2, patel2024comprehensiveanalysisof pages 1-2) |
| Processing | ET-1 is produced by stepwise proteolysis: precursor/proendothelin is cleaved to big ET-1 (38–39 aa), then ECE-1/ECE-2 generate mature ET-1; alternative proteases can also contribute. | Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716; Schiffrin, 2025 — https://doi.org/10.1042/cs20255853 | (schiffrin2024endothelinsystemin pages 1-2, schiffrin2025endothelinantagonistsfor pages 1-2) |
| Receptors | Mature ET-1 signals through two GPCRs: ETA/EDNRA and ETB/EDNRB. ETA is the major vasoconstrictor receptor on vascular smooth muscle; endothelial ETB promotes NO/prostacyclin release and vasodilation; ETB can also contribute to ET-1 clearance. | Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716; Arndt et al., 2024 — https://doi.org/10.1042/cs20240426; Prepeliuc et al., 2025 — https://doi.org/10.3390/biomedicines13102480 | (schiffrin2024endothelinsystemin pages 2-4, arndt2024endothelinandthe pages 2-2, prepeliuc2025theinvolvementof pages 4-6) |
| Signaling | Canonical downstream signaling includes Gq/11 → PLCβ → IP3/DAG → Ca2+/PKC, plus ROS generation, MAPK/ERK, and growth/remodeling pathways; ET signaling can also involve G12/13 and β-arrestin-linked signaling. | Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716; Prepeliuc et al., 2025 — https://doi.org/10.3390/biomedicines13102480; Maiza, 2026 — https://doi.org/10.3389/fped.2025.1718057 | (schiffrin2024endothelinsystemin pages 2-4, prepeliuc2025theinvolvementof pages 4-6, maiza2026endothelin1inthe pages 1-2) |
| Production/localization | ET-1 is produced predominantly by vascular endothelial cells and also by some epithelial cells. In kidney, ET-1 and ECE1 immunolocalize to vessels and glomeruli, while Ece1/Ece1 mRNA is enriched in endothelial cells; ET-1 can be stored with precursor/ECE1 in Weibel–Palade bodies. | Patel et al., 2024 — https://doi.org/10.1042/bsr20240768; Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716; Prepeliuc et al., 2025 — https://doi.org/10.3390/biomedicines13102480 | (patel2024comprehensiveanalysisof pages 1-2, patel2024comprehensiveanalysisof media f464fe7a, schiffrin2024endothelinsystemin pages 1-2, prepeliuc2025theinvolvementof pages 4-6) |
| Key developmental role | In mouse embryos, Edn1 is a crucial pharyngeal arch morphogen. It is produced in arch ectoderm, pharyngeal pouch endoderm, and arch core mesoderm, signals via Ednra on cranial neural crest-derived ectomesenchyme, and is required for mandibular/throat patterning and survival. | Clouthier et al., 2000 — https://doi.org/10.1006/dbio.1999.9527; Tavares et al., 2012 — https://doi.org/10.1016/j.ydbio.2012.08.003; Clouthier et al., 2010 — https://doi.org/10.1002/ajmg.a.33568 | (clouthier2000signalingpathwayscrucial pages 1-2, tavares2012ectodermalderivedendothelin1is pages 2-4, tavares2012ectodermalderivedendothelin1is pages 1-2, clouthier2010regulationoffacial pages 16-20) |
| Kidney/vascular role | ET-1 is a core regulator of vascular tone, blood pressure, and renal physiology/pathophysiology. In the kidney endothelin system, endothelial ECE1 and ET-1 are prominent in glomeruli/endothelium; dysregulated ET-1 contributes to hypertension, CKD, and acute kidney injury models. | Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716; Patel et al., 2024 — https://doi.org/10.1042/bsr20240768; Afolabi et al., 2023 — https://doi.org/10.1093/function/zqad022 | (schiffrin2024endothelinsystemin pages 1-2, patel2024comprehensiveanalysisof pages 1-2, patel2024comprehensiveanalysisof media f464fe7a) |
| Translational/clinical relevance | The ET-1/EDN1 pathway remains an active therapeutic target. Recent developments include aprocitentan for resistant hypertension, sparsentan approval in 2023 for IgA nephropathy, genotype-guided ETA-antagonist trials, and biomarker/translational use of ET-axis measurements in portal hypertension and cardiovascular disease. | Abraham et al., 2023 — https://doi.org/10.17863/cam.104737; Owen et al., 2024 — https://doi.org/10.1042/bsr20240528; Schiffrin & Pollock, 2024 — https://doi.org/10.1161/hypertensionaha.123.21716 | (abraham2023currentandfuture pages 17-20, abraham2023currentandfuture pages 7-11, owen2024microarrayanalysisdemonstrates pages 1-2, schiffrin2024endothelinsystemin pages 12-14) |
Table: This table summarizes the core functional annotation for mouse Edn1/ET-1, including molecular processing, receptors, signaling, localization, developmental roles, and current translational relevance. It is designed to support a concise, evidence-based narrative for UniProt P22387.
A 2024 study provides immunolocalization and scRNA-seq visuals supporting kidney localization and expression patterns of endothelin system components, including ET-1 and ECE1 in mouse kidney vessels/glomeruli and dot/violin plots for endothelin system genes across kidney cell clusters. (patel2024comprehensiveanalysisof media f464fe7a, patel2024comprehensiveanalysisof media 735b12ea, patel2024comprehensiveanalysisof media c1e6ece1)
References
(schiffrin2024endothelinsystemin pages 1-2): Ernesto L. Schiffrin and David M. Pollock. Endothelin system in hypertension and chronic kidney disease. Hypertension, 81:691-701, Apr 2024. URL: https://doi.org/10.1161/hypertensionaha.123.21716, doi:10.1161/hypertensionaha.123.21716. This article has 73 citations and is from a domain leading peer-reviewed journal.
(schiffrin2025endothelinantagonistsfor pages 1-2): Ernesto L. Schiffrin. Endothelin antagonists for hypertension: has their time finally arrived? Clinical Science (London, England : 1979), 139:769-776, Jul 2025. URL: https://doi.org/10.1042/cs20255853, doi:10.1042/cs20255853. This article has 2 citations.
(patel2024comprehensiveanalysisof pages 1-2): Margi Patel, Nicholas Harris, Malgorzata Kasztan, and Kelly A. Hyndman. Comprehensive analysis of the endothelin system in the kidneys of mice, rats, and humans. Bioscience Reports, Jul 2024. URL: https://doi.org/10.1042/bsr20240768, doi:10.1042/bsr20240768. This article has 1 citations and is from a peer-reviewed journal.
(clouthier2004understandingendothelin1function pages 1-2): David E. Clouthier and Thomas F. Schilling. Understanding endothelin-1 function during craniofacial development in the mouse and zebrafish. Birth defects research. Part C, Embryo today : reviews, 72 2:190-9, Jun 2004. URL: https://doi.org/10.1002/bdrc.20007, doi:10.1002/bdrc.20007. This article has 70 citations.
(schiffrin2024endothelinsystemin pages 2-4): Ernesto L. Schiffrin and David M. Pollock. Endothelin system in hypertension and chronic kidney disease. Hypertension, 81:691-701, Apr 2024. URL: https://doi.org/10.1161/hypertensionaha.123.21716, doi:10.1161/hypertensionaha.123.21716. This article has 73 citations and is from a domain leading peer-reviewed journal.
(arndt2024endothelinandthe pages 2-2): Philipp F. Arndt, Kati Turkowski, Michael J. Cekay, Bastian Eul, Friedrich Grimminger, and Rajkumar Savai. Endothelin and the tumor microenvironment: a finger in every pie. Clinical Science (London, England : 1979), 138:617-634, May 2024. URL: https://doi.org/10.1042/cs20240426, doi:10.1042/cs20240426. This article has 13 citations.
(prepeliuc2025theinvolvementof pages 4-6): Cristian Sorin Prepeliuc, Maria Antoanela Pasăre, Maria Gabriela Grigoriu, Ionela Larisa Miftode, Radu Ștefan Miftode, Andrei Vâță, Irina Iuliana Costache-Enache, and Egidia Gabriela Miftode. The involvement of endothelin-1 in sepsis and organ dysfunction—a novel biomarker in patient assessment. Biomedicines, 13:2480, Oct 2025. URL: https://doi.org/10.3390/biomedicines13102480, doi:10.3390/biomedicines13102480. This article has 3 citations.
(patel2024comprehensiveanalysisof media f464fe7a): Margi Patel, Nicholas Harris, Malgorzata Kasztan, and Kelly A. Hyndman. Comprehensive analysis of the endothelin system in the kidneys of mice, rats, and humans. Bioscience Reports, Jul 2024. URL: https://doi.org/10.1042/bsr20240768, doi:10.1042/bsr20240768. This article has 1 citations and is from a peer-reviewed journal.
(maiza2026endothelin1inthe pages 1-2): Iman Maiza. Endothelin-1 in the failing fontan: pathobiology, precision therapeutics, and future trial design. Frontiers in Pediatrics, 13:1718057, Feb 2026. URL: https://doi.org/10.3389/fped.2025.1718057, doi:10.3389/fped.2025.1718057. This article has 0 citations.
(clouthier2000signalingpathwayscrucial pages 1-2): David E. Clouthier, S.Clay Williams, Hiromi Yanagisawa, Matthew Wieduwilt, James A. Richardson, and Masashi Yanagisawa. Signaling pathways crucial for craniofacial development revealed by endothelin-a receptor-deficient mice. Developmental biology, 217 1:10-24, Jan 2000. URL: https://doi.org/10.1006/dbio.1999.9527, doi:10.1006/dbio.1999.9527. This article has 241 citations and is from a peer-reviewed journal.
(clouthier2010regulationoffacial pages 6-8): David E. Clouthier, Elvin Garcia, and Thomas F. Schilling. Regulation of facial morphogenesis by endothelin signaling: insights from mice and fish. American Journal of Medical Genetics Part A, 152A:2962-2973, Dec 2010. URL: https://doi.org/10.1002/ajmg.a.33568, doi:10.1002/ajmg.a.33568. This article has 106 citations.
(clouthier2010regulationoffacial pages 2-4): David E. Clouthier, Elvin Garcia, and Thomas F. Schilling. Regulation of facial morphogenesis by endothelin signaling: insights from mice and fish. American Journal of Medical Genetics Part A, 152A:2962-2973, Dec 2010. URL: https://doi.org/10.1002/ajmg.a.33568, doi:10.1002/ajmg.a.33568. This article has 106 citations.
(tavares2012ectodermalderivedendothelin1is pages 1-2): Andre L.P. Tavares, Elvin L. Garcia, Katherine Kuhn, Crystal M. Woods, Trevor Williams, and David E. Clouthier. Ectodermal-derived endothelin1 is required for patterning the distal and intermediate domains of the mouse mandibular arch. Developmental biology, 371 1:47-56, Nov 2012. URL: https://doi.org/10.1016/j.ydbio.2012.08.003, doi:10.1016/j.ydbio.2012.08.003. This article has 44 citations and is from a peer-reviewed journal.
(tavares2012ectodermalderivedendothelin1is pages 2-4): Andre L.P. Tavares, Elvin L. Garcia, Katherine Kuhn, Crystal M. Woods, Trevor Williams, and David E. Clouthier. Ectodermal-derived endothelin1 is required for patterning the distal and intermediate domains of the mouse mandibular arch. Developmental biology, 371 1:47-56, Nov 2012. URL: https://doi.org/10.1016/j.ydbio.2012.08.003, doi:10.1016/j.ydbio.2012.08.003. This article has 44 citations and is from a peer-reviewed journal.
(abraham2023currentandfuture pages 1-4): George R. Abraham, Thomas L. Williams, J. Maguire, Peter J. Greasley, Philip Ambery, and A. Davenport. Current and future strategies for targeting the endothelin pathway in cardiovascular disease. JournalArticle, Dec 2023. URL: https://doi.org/10.17863/cam.104737, doi:10.17863/cam.104737. This article has 25 citations.
(abraham2023currentandfuture pages 7-11): George R. Abraham, Thomas L. Williams, J. Maguire, Peter J. Greasley, Philip Ambery, and A. Davenport. Current and future strategies for targeting the endothelin pathway in cardiovascular disease. JournalArticle, Dec 2023. URL: https://doi.org/10.17863/cam.104737, doi:10.17863/cam.104737. This article has 25 citations.
(abraham2023currentandfuture pages 17-20): George R. Abraham, Thomas L. Williams, J. Maguire, Peter J. Greasley, Philip Ambery, and A. Davenport. Current and future strategies for targeting the endothelin pathway in cardiovascular disease. JournalArticle, Dec 2023. URL: https://doi.org/10.17863/cam.104737, doi:10.17863/cam.104737. This article has 25 citations.
(owen2024microarrayanalysisdemonstrates pages 1-2): Nicola E. Owen, Thomas L. Williams, Janet J. Maguire, Rhoda E. Kuc, Emma E. Davenport, and Anthony P. Davenport. Microarray analysis demonstrates up-regulation of the endothelin-1 gene with compensatory down-regulation of the eta receptor gene in human portal vein. Bioscience Reports, Jul 2024. URL: https://doi.org/10.1042/bsr20240528, doi:10.1042/bsr20240528. This article has 5 citations and is from a peer-reviewed journal.
(clouthier2010regulationoffacial pages 16-20): David E. Clouthier, Elvin Garcia, and Thomas F. Schilling. Regulation of facial morphogenesis by endothelin signaling: insights from mice and fish. American Journal of Medical Genetics Part A, 152A:2962-2973, Dec 2010. URL: https://doi.org/10.1002/ajmg.a.33568, doi:10.1002/ajmg.a.33568. This article has 106 citations.
(schiffrin2024endothelinsystemin pages 12-14): Ernesto L. Schiffrin and David M. Pollock. Endothelin system in hypertension and chronic kidney disease. Hypertension, 81:691-701, Apr 2024. URL: https://doi.org/10.1161/hypertensionaha.123.21716, doi:10.1161/hypertensionaha.123.21716. This article has 73 citations and is from a domain leading peer-reviewed journal.
(patel2024comprehensiveanalysisof media 735b12ea): Margi Patel, Nicholas Harris, Malgorzata Kasztan, and Kelly A. Hyndman. Comprehensive analysis of the endothelin system in the kidneys of mice, rats, and humans. Bioscience Reports, Jul 2024. URL: https://doi.org/10.1042/bsr20240768, doi:10.1042/bsr20240768. This article has 1 citations and is from a peer-reviewed journal.
(patel2024comprehensiveanalysisof media c1e6ece1): Margi Patel, Nicholas Harris, Malgorzata Kasztan, and Kelly A. Hyndman. Comprehensive analysis of the endothelin system in the kidneys of mice, rats, and humans. Bioscience Reports, Jul 2024. URL: https://doi.org/10.1042/bsr20240768, doi:10.1042/bsr20240768. This article has 1 citations and is from a peer-reviewed journal.
Core ligand identity: Edn1 encodes preproendothelin-1, processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors EDNRA and EDNRB. UniProt summarizes endothelins as "endothelium-derived vasoconstrictor peptides" and describes ET-1 as a "Probable ligand for G-protein coupled receptors EDNRA and EDNRB." [file:mouse/Edn1/Edn1-uniprot.txt]
Core receptor binding and signaling: Endothelin stimulates high-affinity receptor binding and phospholipase C signaling in fibroblasts; the abstract reports that endothelin "specifically binds to a single class of high affinity receptors" and "stimulates phospholipase C with the production of second messengers inositol trisphosphate and 1,2-diacylglycerol." [PMID:2542249 "A novel vasoactive peptide endothelin stimulates mitogenesis through inositol lipid turnover in Swiss 3T3 fibroblasts.", "specifically binds to a single class of high affinity receptors ... stimulates phospholipase C"]
Vascular and blood-pressure physiology: Edn1-null mice "die of respiratory failure at birth and have morphological abnormalities of the pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop elevated blood pressure." This supports Edn1 as a physiological regulator of vascular tone and blood pressure, while broad organismal phenotypes remain non-core relative to ligand activity. [PMID:8152482 "Elevated blood pressure and craniofacial abnormalities in mice deficient in endothelin-1.", "ET-1+/- heterozygous mice, which produce lower levels of ET-1 than wild-type mice, develop elevated blood pressure"]
Cardiovascular development: Edn1-/- mice have "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract." These defects support developmental annotations for heart and great-vessel morphogenesis, but they are best treated as non-core developmental consequences of endothelin receptor signaling. [PMID:7615798 "Aortic arch malformations and ventricular septal defect in mice deficient in endothelin-1.", "cardiovascular malformations including interrupted aortic arch ... and ventricular septal defect with abnormalities of the outflow tract"]
Neural crest patterning: Edn1/Ednra signaling is required for branchial arch patterning; one paper states that Edn1 "regulates the dorsoventral branchial arch patterning in mice." These annotations are supported when specific to cranial/cardiac neural crest patterning but should not be generalized to all development. PMID:15110048
Sympathetic axon guidance: Venous endothelin-1 is a direct guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin controls growth and guidance of the STG axons to the heart." Poltavski et al. report that "endothelin-1 induces sympathetic neurons expressing the receptor Ednra to project to the vena cavae leading to the heart." These support cardiac sympathetic axon-guidance annotations as well-supported but non-core developmental signaling roles. [PMID:24875861 "Venous endothelin guides sympathetic innervation of the developing mouse heart.", "vascular-derived endothelin controls growth and guidance of the STG axons to the heart"] [PMID:30735130 "Venous endothelin modulates responsiveness of cardiac sympathetic axons to arterial semaphorin.", "endothelin-1 induces sympathetic neurons expressing the receptor Ednra to project to the vena cavae leading to the heart"]
Kidney and podocyte disease evidence: Endothelin-1 stimulation of primary mouse podocytes "elicited rapid calcium transients mediated by endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)" and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models. These support renal/podocyte annotations when direct, but disease-model terms are not core Edn1 function. [PMID:24722437 "Direct action of endothelin-1 on podocytes promotes diabetic glomerulosclerosis.", "elicited rapid calcium transients mediated by endothelin type A receptors"] PMID:31402170
Curation judgment: broad signaling outputs such as MAPK, ERK, JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance response, hypoxia response, and many hormone-response terms are downstream or context-specific readouts of endothelin receptor activation. Prefer the more specific ligand/receptor-binding and endothelin receptor signaling terms; keep direct mouse developmental or renal phenotypes as non-core rather than core functions.
Falcon integration: the Falcon report independently supports the same core model: Edn1 encodes the preproendothelin-1 precursor processed to mature ET-1, a secreted peptide hormone/vasoconstrictor that signals through ETA/EDNRA and ETB/EDNRB receptors. It also emphasizes extracellular ligand localization, endothelial/glomerular production, vascular tone, renal physiology, and pharyngeal-arch morphogen activity; this reinforced ACCEPT for hormone/endothelin receptor binding and endothelin receptor signaling terms, while keeping broad downstream or phenotype terms non-core or over-annotated. [file:mouse/Edn1/Edn1-deep-research-falcon.md "encodes a secreted peptide hormone precursor"; "signals primarily via two class A GPCRs"]
id: P22387
gene_symbol: Edn1
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:10090
label: Mus musculus
description: 'Edn1 encodes preproendothelin-1, the precursor of the secreted endothelin-1
peptide. Mature ET-1 binds endothelin A and B receptors to regulate vascular smooth
muscle contraction, blood pressure, renal/podocyte signaling, craniofacial and cardiovascular
development, and sympathetic axon guidance.'
existing_annotations:
- term:
id: GO:0006874
label: intracellular calcium ion homeostasis
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: intracellular calcium ion homeostasis is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0045987
label: positive regulation of smooth muscle contraction
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: positive regulation of smooth muscle contraction is biologically
consistent with the curated synthesis for Edn1 and is supported by IBA
evidence (GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon identifies ET-1 as a potent vasoconstrictor whose
ETA signaling in vascular smooth muscle promotes sustained contraction.
- term:
id: GO:0003100
label: regulation of systemic arterial blood pressure by endothelin
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: regulation of systemic arterial blood pressure by endothelin is
biologically consistent with the curated synthesis for Edn1 and is
supported by IBA evidence (GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon summarizes ET-1 as a central regulator of vascular
tone and blood pressure through receptor-specific endothelin signaling.
- term:
id: GO:0005179
label: hormone activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: hormone activity is biologically consistent with the curated
synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon describes Edn1 as encoding a secreted peptide
hormone precursor that yields mature endothelin-1, supporting
hormone/receptor ligand activity.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by IBA evidence (GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0014826
label: vein smooth muscle contraction
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: vein smooth muscle contraction is biologically consistent with the
curated synthesis for Edn1 and is supported by IBA evidence
(GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0031707
label: endothelin A receptor binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: endothelin A receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by IBA evidence
(GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETA/EDNRA
receptors, supporting endothelin A receptor binding.
- term:
id: GO:0031708
label: endothelin B receptor binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: endothelin B receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by IBA evidence
(GO_REF:0000033).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETB/EDNRB
receptors, supporting endothelin B receptor binding.
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: extracellular region is biologically consistent with the curated
synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0019229
label: regulation of vasoconstriction
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: regulation of vasoconstriction captures the right general biology
for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than vasoconstriction
for this gene. Replace with vasoconstriction to align the annotation with
the reviewed evidence.
proposed_replacement_terms:
- id: GO:0042310
label: vasoconstriction
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0042310
label: vasoconstriction
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: vasoconstriction is biologically consistent with the curated
synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0097746
label: blood vessel diameter maintenance
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: blood vessel diameter maintenance is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: negative regulation of transcription by RNA polymerase II is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0001666
label: response to hypoxia
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to hypoxia is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0001821
label: histamine secretion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: histamine secretion is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0003100
label: regulation of systemic arterial blood pressure by endothelin
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: regulation of systemic arterial blood pressure by endothelin is
biologically consistent with the curated synthesis for Edn1 and is
supported by IEA evidence (GO_REF:0000107).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon summarizes ET-1 as a central regulator of vascular
tone and blood pressure through receptor-specific endothelin signaling.
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cytokine activity captures the right general biology for Edn1, but
a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than receptor ligand
activity for this gene. Replace with receptor ligand activity to align the
annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0048018
label: receptor ligand activity
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- term:
id: GO:0005179
label: hormone activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: hormone activity is biologically consistent with the curated
synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000107).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon describes Edn1 as encoding a secreted peptide
hormone precursor that yields mature endothelin-1, supporting
hormone/receptor ligand activity.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by IEA evidence (GO_REF:0000120).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cytoplasm is not supported as an appropriate annotation for Edn1
after review of the available mouse evidence.
action: REMOVE
reason: The term appears to reflect either an unsupported transfer, a
paralog/family overreach, or a localization/process inconsistent with the
curated Edn1 biology.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0006874
label: intracellular calcium ion homeostasis
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: intracellular calcium ion homeostasis is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0007166
label: cell surface receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cell surface receptor signaling pathway captures the right general
biology for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007186
label: G protein-coupled receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: G protein-coupled receptor signaling pathway captures the right
general biology for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007204
label: positive regulation of cytosolic calcium ion concentration
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of cytosolic calcium ion concentration is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0007267
label: cell-cell signaling
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cell-cell signaling is biologically consistent with secreted paracrine Edn1 ligand activity but is less specific than endothelin receptor signaling.
action: KEEP_AS_NON_CORE
reason: Edn1 is a secreted peptide ligand that mediates receptor-dependent communication between cells; retain the broad signaling term as non-core while preferring endothelin receptor signaling and receptor ligand terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1,
processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin
receptors EDNRA and EDNRB.'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: positive regulation of cell population proliferation is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0009410
label: response to xenobiotic stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to xenobiotic stimulus is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010193
label: response to ozone
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to ozone is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010460
label: positive regulation of heart rate
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of heart rate is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1 and Ednra knock-out mice demonstrate abnormalities
in pharyngeal arch artery patterning
- term:
id: GO:0010613
label: positive regulation of cardiac muscle hypertrophy
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of cardiac muscle hypertrophy is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010629
label: negative regulation of gene expression
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: negative regulation of gene expression is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0014823
label: response to activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to activity is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0014824
label: artery smooth muscle contraction
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: artery smooth muscle contraction is a direct vascular output of
endothelin-1 receptor signaling.
action: ACCEPT
reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in
vascular smooth muscle drives vasoconstriction through PLC/calcium signaling,
making this term consistent with the curated vascular contraction function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'ETA (EDNRA/ETAR): classically enriched on vascular smooth
muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and
growth/remodeling programs.'
- term:
id: GO:0014826
label: vein smooth muscle contraction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: vein smooth muscle contraction is biologically consistent with the
curated synthesis for Edn1 and is supported by IEA evidence
(GO_REF:0000107).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0019722
label: calcium-mediated signaling
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: calcium-mediated signaling is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0023019
label: signal transduction involved in regulation of gene expression
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: signal transduction involved in regulation of gene expression is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030072
label: peptide hormone secretion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: peptide hormone secretion is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030185
label: nitric oxide transport
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: nitric oxide transport is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030335
label: positive regulation of cell migration
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of cell migration is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0031707
label: endothelin A receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: endothelin A receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by IEA evidence
(GO_REF:0000120).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETA/EDNRA
receptors, supporting endothelin A receptor binding.
- term:
id: GO:0031708
label: endothelin B receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: endothelin B receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by IEA evidence
(GO_REF:0000120).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETB/EDNRB
receptors, supporting endothelin B receptor binding.
- term:
id: GO:0032308
label: positive regulation of prostaglandin secretion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of prostaglandin secretion is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0032496
label: response to lipopolysaccharide
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to lipopolysaccharide is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0033093
label: Weibel-Palade body
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Weibel-Palade body localization reflects endothelial regulated
storage/secretion of ET-1 precursor-processing components.
action: KEEP_AS_NON_CORE
reason: This supports regulated endothelial storage and secretion of ET-1,
but remains a localization/trafficking context rather than the core ligand
signaling role.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: ET-1 precursors and processing components can be stored in
endothelial secretory vesicles, particularly Weibel-Palade bodies, with
reported co-localization of pro-ET-1 and ECE-1.
- term:
id: GO:0033574
label: response to testosterone
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to testosterone is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0034392
label: negative regulation of smooth muscle cell apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: negative regulation of smooth muscle cell apoptotic process is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0034696
label: response to prostaglandin F
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to prostaglandin F is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0035094
label: response to nicotine
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to nicotine is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0035556
label: intracellular signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: intracellular signal transduction is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0035994
label: response to muscle stretch
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to muscle stretch is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0042045
label: epithelial fluid transport
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: epithelial fluid transport is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0042482
label: positive regulation of odontogenesis
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of odontogenesis is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0042554
label: superoxide anion generation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: superoxide anion generation is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0043200
label: response to amino acid
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to amino acid is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0043410
label: positive regulation of MAPK cascade
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of MAPK cascade is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0043491
label: phosphatidylinositol 3-kinase/protein kinase B signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: phosphatidylinositol 3-kinase/protein kinase B signal transduction
is related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0044321
label: response to leptin
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to leptin is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045178
label: basal part of cell
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: The local evidence supports Edn1 as a secreted ligand but does not
verify this specific basal-cell localization.
action: UNDECIDED
reason: The generic secreted-ligand evidence and Weibel-Palade storage model
do not establish a basal part of cell annotation for Edn1.
- term:
id: GO:0045793
label: positive regulation of cell size
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of cell size is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045840
label: positive regulation of mitotic nuclear division
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of mitotic nuclear division is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: positive regulation of transcription by RNA polymerase II is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045987
label: positive regulation of smooth muscle contraction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of smooth muscle contraction is biologically
consistent with the curated synthesis for Edn1 and is supported by IEA
evidence (GO_REF:0000107).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon identifies ET-1 as a potent vasoconstrictor whose
ETA signaling in vascular smooth muscle promotes sustained contraction.
- term:
id: GO:0046330
label: positive regulation of JNK cascade
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of JNK cascade is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0046887
label: positive regulation of hormone secretion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of hormone secretion is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0046888
label: negative regulation of hormone secretion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: negative regulation of hormone secretion is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0048237
label: rough endoplasmic reticulum lumen
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: The local evidence supports Edn1 as a secreted peptide precursor,
but does not verify a rough endoplasmic reticulum lumen localization.
action: UNDECIDED
reason: Secretory-protein biology alone is not enough to retain this specific
automated cellular-component annotation without direct localization evidence.
- term:
id: GO:0048661
label: positive regulation of smooth muscle cell proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of smooth muscle cell proliferation is related
to reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0050850
label: positive regulation of calcium-mediated signaling
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of calcium-mediated signaling is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0051248
label: negative regulation of protein metabolic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: negative regulation of protein metabolic process is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0051899
label: membrane depolarization
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: membrane depolarization is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0060137
label: maternal process involved in parturition
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: maternal process involved in parturition is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0060298
label: positive regulation of sarcomere organization
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of sarcomere organization is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0061051
label: positive regulation of cell growth involved in cardiac muscle cell
development
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of cell growth involved in cardiac muscle cell
development is related to reported Edn1 biology only as a broad downstream
readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1/Ednra signaling is involved in pharyngeal artery
development by controlling the fate of neural crest cells
- term:
id: GO:0070301
label: cellular response to hydrogen peroxide
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to hydrogen peroxide is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071277
label: cellular response to calcium ion
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to calcium ion is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071346
label: cellular response to type II interferon
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to type II interferon is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071347
label: cellular response to interleukin-1
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to interleukin-1 is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071356
label: cellular response to tumor necrosis factor
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to tumor necrosis factor is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071375
label: cellular response to peptide hormone stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to peptide hormone stimulus is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071385
label: cellular response to glucocorticoid stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to glucocorticoid stimulus is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071389
label: cellular response to mineralocorticoid stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to mineralocorticoid stimulus is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071398
label: cellular response to fatty acid
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to fatty acid is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071456
label: cellular response to hypoxia
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to hypoxia is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071466
label: cellular response to xenobiotic stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to xenobiotic stimulus is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071548
label: response to dexamethasone
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to dexamethasone is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071559
label: response to transforming growth factor beta
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to transforming growth factor beta is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0071560
label: cellular response to transforming growth factor beta stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to transforming growth factor beta stimulus is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0086100
label: endothelin receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: endothelin receptor signaling pathway is biologically consistent
with the curated synthesis for Edn1 and is supported by IEA evidence
(GO_REF:0000107).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'Falcon summarizes the canonical endothelin receptor pathway:
ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream
signaling.'
- term:
id: GO:0090023
label: positive regulation of neutrophil chemotaxis
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of neutrophil chemotaxis is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0097237
label: cellular response to toxic substance
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cellular response to toxic substance is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0141156
label: cAMP/PKA signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: cAMP/PKA signal transduction is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0160195
label: negative regulation of phospholipase C/protein kinase C signal
transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: negative regulation of phospholipase C/protein kinase C signal
transduction is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1901224
label: positive regulation of non-canonical NF-kappaB signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of non-canonical NF-kappaB signal transduction
is related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1902074
label: response to salt
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: response to salt is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1904707
label: positive regulation of vascular associated smooth muscle cell
proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: positive regulation of vascular associated smooth muscle cell
proliferation is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: negative regulation of transcription by RNA polymerase II is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0003100
label: regulation of systemic arterial blood pressure by endothelin
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: regulation of systemic arterial blood pressure by endothelin is
biologically consistent with the curated synthesis for Edn1 and is
supported by ISO evidence (GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon summarizes ET-1 as a central regulator of vascular
tone and blood pressure through receptor-specific endothelin signaling.
- term:
id: GO:0005125
label: cytokine activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: cytokine activity captures the right general biology for Edn1, but
a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than receptor ligand
activity for this gene. Replace with receptor ligand activity to align the
annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0048018
label: receptor ligand activity
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- term:
id: GO:0005179
label: hormone activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: hormone activity is biologically consistent with the curated
synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon describes Edn1 as encoding a secreted peptide
hormone precursor that yields mature endothelin-1, supporting
hormone/receptor ligand activity.
- term:
id: GO:0005615
label: extracellular space
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: cytoplasm is not supported as an appropriate annotation for Edn1
after review of the available mouse evidence.
action: REMOVE
reason: The term appears to reflect either an unsupported transfer, a
paralog/family overreach, or a localization/process inconsistent with the
curated Edn1 biology.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0007166
label: cell surface receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: cell surface receptor signaling pathway captures the right general
biology for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007186
label: G protein-coupled receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: G protein-coupled receptor signaling pathway captures the right
general biology for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007267
label: cell-cell signaling
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: cell-cell signaling is biologically consistent with secreted paracrine Edn1 ligand activity but is less specific than endothelin receptor signaling.
action: KEEP_AS_NON_CORE
reason: Edn1 is a secreted peptide ligand that mediates receptor-dependent communication between cells; retain the broad signaling term as non-core while preferring endothelin receptor signaling and receptor ligand terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1,
processed to endothelin-1, a secreted vasoactive peptide ligand for endothelin
receptors EDNRA and EDNRB.'
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of cell population proliferation is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010460
label: positive regulation of heart rate
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of heart rate is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: PMID:23933587
supporting_text: controlling the fate of neural crest cells through a
Dlx5/Dlx6-independent mechanism
- term:
id: GO:0010613
label: positive regulation of cardiac muscle hypertrophy
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of cardiac muscle hypertrophy is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010629
label: negative regulation of gene expression
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: negative regulation of gene expression is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0014824
label: artery smooth muscle contraction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: artery smooth muscle contraction is a direct vascular output of
endothelin-1 receptor signaling.
action: ACCEPT
reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in
vascular smooth muscle drives vasoconstriction through PLC/calcium signaling,
making this term consistent with the curated vascular contraction function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'ETA (EDNRA/ETAR): classically enriched on vascular smooth
muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and
growth/remodeling programs.'
- term:
id: GO:0014826
label: vein smooth muscle contraction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: vein smooth muscle contraction is biologically consistent with the
curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0019722
label: calcium-mediated signaling
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: calcium-mediated signaling is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0023019
label: signal transduction involved in regulation of gene expression
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: signal transduction involved in regulation of gene expression is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030072
label: peptide hormone secretion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: peptide hormone secretion is related to reported Edn1 biology only
as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030185
label: nitric oxide transport
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: nitric oxide transport is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0030335
label: positive regulation of cell migration
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of cell migration is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0031394
label: positive regulation of prostaglandin biosynthetic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of prostaglandin biosynthetic process is
supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0031707
label: endothelin A receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: endothelin A receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETA/EDNRA
receptors, supporting endothelin A receptor binding.
- term:
id: GO:0031708
label: endothelin B receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: endothelin B receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETB/EDNRB
receptors, supporting endothelin B receptor binding.
- term:
id: GO:0042310
label: vasoconstriction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: vasoconstriction is biologically consistent with the curated
synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0043410
label: positive regulation of MAPK cascade
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of MAPK cascade is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0043491
label: phosphatidylinositol 3-kinase/protein kinase B signal transduction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: phosphatidylinositol 3-kinase/protein kinase B signal transduction
is related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045793
label: positive regulation of cell size
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of cell size is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045840
label: positive regulation of mitotic nuclear division
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of mitotic nuclear division is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of transcription by RNA polymerase II is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0046330
label: positive regulation of JNK cascade
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of JNK cascade is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0046887
label: positive regulation of hormone secretion
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of hormone secretion is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0048661
label: positive regulation of smooth muscle cell proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of smooth muscle cell proliferation is related
to reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0050850
label: positive regulation of calcium-mediated signaling
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of calcium-mediated signaling is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0051248
label: negative regulation of protein metabolic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: negative regulation of protein metabolic process is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0060298
label: positive regulation of sarcomere organization
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of sarcomere organization is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0061051
label: positive regulation of cell growth involved in cardiac muscle cell
development
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of cell growth involved in cardiac muscle cell
development is related to reported Edn1 biology only as a broad downstream
readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: PMID:15110048
supporting_text: ET-1/EdnrA signaling may contribute to the dorsoventral
axis patterning of the branchial arch system
- term:
id: GO:0070101
label: positive regulation of chemokine-mediated signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: positive regulation of chemokine-mediated signaling pathway is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0086100
label: endothelin receptor signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: endothelin receptor signaling pathway is biologically consistent
with the curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000119).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'Falcon summarizes the canonical endothelin receptor pathway:
ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream
signaling.'
- term:
id: GO:0160195
label: negative regulation of phospholipase C/protein kinase C signal
transduction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: negative regulation of phospholipase C/protein kinase C signal
transduction is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0001821
label: histamine secretion
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: histamine secretion is related to reported Edn1 biology only as a
broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0005615
label: extracellular space
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0007204
label: positive regulation of cytosolic calcium ion concentration
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of cytosolic calcium ion concentration is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of cell population proliferation is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0010629
label: negative regulation of gene expression
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: negative regulation of gene expression is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0014824
label: artery smooth muscle contraction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: artery smooth muscle contraction is a direct vascular output of
endothelin-1 receptor signaling.
action: ACCEPT
reason: ET-1 is a vasoactive peptide ligand whose ETA/EDNRA signaling in
vascular smooth muscle drives vasoconstriction through PLC/calcium signaling,
making this term consistent with the curated vascular contraction function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'ETA (EDNRA/ETAR): classically enriched on vascular smooth
muscle cells (VSMCs) and mediates potent, sustained vasoconstriction and
growth/remodeling programs.'
- term:
id: GO:0031707
label: endothelin A receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: endothelin A receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000096).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETA/EDNRA
receptors, supporting endothelin A receptor binding.
- term:
id: GO:0031708
label: endothelin B receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: endothelin B receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by ISO evidence
(GO_REF:0000096).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETB/EDNRB
receptors, supporting endothelin B receptor binding.
- term:
id: GO:0032308
label: positive regulation of prostaglandin secretion
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of prostaglandin secretion is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0033093
label: Weibel-Palade body
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: Weibel-Palade body localization reflects endothelial regulated
storage/secretion of ET-1 precursor-processing components.
action: KEEP_AS_NON_CORE
reason: This supports regulated endothelial storage and secretion of ET-1,
but remains a localization/trafficking context rather than the core ligand
signaling role.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: ET-1 precursors and processing components can be stored in
endothelial secretory vesicles, particularly Weibel-Palade bodies, with
reported co-localization of pro-ET-1 and ECE-1.
- term:
id: GO:0034392
label: negative regulation of smooth muscle cell apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: negative regulation of smooth muscle cell apoptotic process is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0035556
label: intracellular signal transduction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: intracellular signal transduction is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0042045
label: epithelial fluid transport
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: epithelial fluid transport is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0042310
label: vasoconstriction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: vasoconstriction is biologically consistent with the curated
synthesis for Edn1 and is supported by ISO evidence (GO_REF:0000096).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0042482
label: positive regulation of odontogenesis
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of odontogenesis is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0042554
label: superoxide anion generation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: superoxide anion generation is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045178
label: basal part of cell
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: The local evidence supports Edn1 as a secreted ligand but does not
verify this specific basal-cell localization.
action: UNDECIDED
reason: The generic secreted-ligand evidence and Weibel-Palade storage model
do not establish a basal part of cell annotation for Edn1.
- term:
id: GO:0045944
label: positive regulation of transcription by RNA polymerase II
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of transcription by RNA polymerase II is
related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0045987
label: positive regulation of smooth muscle contraction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of smooth muscle contraction is biologically
consistent with the curated synthesis for Edn1 and is supported by ISO
evidence (GO_REF:0000096).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon identifies ET-1 as a potent vasoconstrictor whose
ETA signaling in vascular smooth muscle promotes sustained contraction.
- term:
id: GO:0046888
label: negative regulation of hormone secretion
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: negative regulation of hormone secretion is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0048237
label: rough endoplasmic reticulum lumen
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: The local evidence supports Edn1 as a secreted peptide precursor,
but does not verify a rough endoplasmic reticulum lumen localization.
action: UNDECIDED
reason: Secretory-protein biology alone is not enough to retain this specific
automated cellular-component annotation without direct localization evidence.
- term:
id: GO:0051899
label: membrane depolarization
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: membrane depolarization is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0090023
label: positive regulation of neutrophil chemotaxis
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of neutrophil chemotaxis is related to reported
Edn1 biology only as a broad downstream readout or generic interaction
term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1901224
label: positive regulation of non-canonical NF-kappaB signal transduction
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of non-canonical NF-kappaB signal transduction
is related to reported Edn1 biology only as a broad downstream readout or
generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1904707
label: positive regulation of vascular associated smooth muscle cell
proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: positive regulation of vascular associated smooth muscle cell
proliferation is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1900182
label: positive regulation of protein localization to nucleus
evidence_type: IMP
original_reference_id: PMID:21525433
review:
summary: positive regulation of protein localization to nucleus is related
to reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:1905653
label: positive regulation of artery morphogenesis
evidence_type: IMP
original_reference_id: PMID:20495147
review:
summary: positive regulation of artery morphogenesis is supported for Edn1
in a tissue, developmental, trafficking, or disease-model context, but it
is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:9671575
supporting_text: dHAND and the related gene, eHAND, are downregulated in
the branchial and aortic arches of Edn1-null embryos.
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by IDA evidence (PMID:24722437).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0048018
label: receptor ligand activity
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: receptor ligand activity is biologically consistent with the
curated synthesis for Edn1 and is supported by IDA evidence
(PMID:24722437).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- term:
id: GO:0086100
label: endothelin receptor signaling pathway
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: endothelin receptor signaling pathway is biologically consistent
with the curated synthesis for Edn1 and is supported by IDA evidence
(PMID:24722437).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'Falcon summarizes the canonical endothelin receptor pathway:
ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream
signaling.'
- term:
id: GO:0003015
label: heart process
evidence_type: IMP
original_reference_id: PMID:25197047
review:
summary: heart process is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:8152482
supporting_text: have morphological abnormalities of the pharyngeal-arch-derived
craniofacial tissues and organs.
- term:
id: GO:0003015
label: heart process
evidence_type: IMP
original_reference_id: PMID:31219639
review:
summary: heart process is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1 and Ednra knock-out mice demonstrate abnormalities
in pharyngeal arch artery patterning
- term:
id: GO:0007411
label: axon guidance
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: axon guidance is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IMP
original_reference_id: PMID:16868309
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0048675
label: axon extension
evidence_type: IDA
original_reference_id: PMID:18401410
review:
summary: axon extension is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IDA
original_reference_id: PMID:19111534
review:
summary: MAPK cascade is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IMP
original_reference_id: PMID:19111534
review:
summary: MAPK cascade is related to reported Edn1 biology only as a broad
downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0044751
label: cellular response to human chorionic gonadotropin stimulus
evidence_type: IDA
original_reference_id: PMID:19111534
review:
summary: cellular response to human chorionic gonadotropin stimulus is
supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:19111534
supporting_text: The stimulatory effect of hCG on GVBD was partially blocked
by the same antagonist.
- term:
id: GO:0071372
label: cellular response to follicle-stimulating hormone stimulus
evidence_type: IDA
original_reference_id: PMID:19111534
review:
summary: The cited oocyte paper supports LH/hCG-responsive Edn1 signaling,
but does not directly establish a follicle-stimulating hormone response.
action: UNDECIDED
reason: Retaining this FSH-specific annotation requires evidence beyond the
LH/hCG and ET-1/EDNRA oocyte-maturation results in the available citation.
- term:
id: GO:0071373
label: cellular response to luteinizing hormone stimulus
evidence_type: IDA
original_reference_id: PMID:19111534
review:
summary: cellular response to luteinizing hormone stimulus is supported for
Edn1 in a tissue, developmental, trafficking, or disease-model context,
but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:19111534
supporting_text: in response to the preovulatory luteinizing hormone (LH)/human
chorionic gonadotropin (hCG) stimulation.
- term:
id: GO:1903537
label: meiotic cell cycle process involved in oocyte maturation
evidence_type: IDA
original_reference_id: PMID:19111534
review:
summary: meiotic cell cycle process involved in oocyte maturation is
supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:19111534
supporting_text: treatment with endothelin-1 promoted oocyte GVBD.
- term:
id: GO:0010467
label: gene expression
evidence_type: IDA
original_reference_id: PMID:20929948
review:
summary: gene expression is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0070371
label: ERK1 and ERK2 cascade
evidence_type: IDA
original_reference_id: PMID:20929948
review:
summary: ERK1 and ERK2 cascade is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IMP
original_reference_id: PMID:20516397
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0010467
label: gene expression
evidence_type: IMP
original_reference_id: PMID:20516397
review:
summary: gene expression is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0001569
label: branching involved in blood vessel morphogenesis
evidence_type: IMP
original_reference_id: PMID:23933587
review:
summary: branching involved in blood vessel morphogenesis is supported for
Edn1 in a tissue, developmental, trafficking, or disease-model context,
but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1/Ednra signaling is involved in pharyngeal artery
development by controlling the fate of neural crest cells
- term:
id: GO:0014033
label: neural crest cell differentiation
evidence_type: IMP
original_reference_id: PMID:23933587
review:
summary: neural crest cell differentiation is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:23933587
supporting_text: controlling the fate of neural crest cells through a
Dlx5/Dlx6-independent mechanism
- term:
id: GO:0014034
label: neural crest cell fate commitment
evidence_type: IMP
original_reference_id: PMID:23933587
review:
summary: neural crest cell fate commitment is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1 and Ednra knock-out mice demonstrate abnormalities
in pharyngeal arch artery patterning
- term:
id: GO:0061626
label: pharyngeal arch artery morphogenesis
evidence_type: IMP
original_reference_id: PMID:23933587
review:
summary: pharyngeal arch artery morphogenesis is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:23933587
supporting_text: Edn1 and Ednra knock-out mice demonstrate abnormalities
in pharyngeal arch artery patterning
- term:
id: GO:0070294
label: renal sodium ion absorption
evidence_type: IDA
original_reference_id: PMID:23698114
review:
summary: renal sodium ion absorption is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0007005
label: mitochondrion organization
evidence_type: IDA
original_reference_id: PMID:27899487
review:
summary: mitochondrion organization is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0030878
label: thyroid gland development
evidence_type: IMP
original_reference_id: PMID:26506449
review:
summary: thyroid gland development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:15110048
supporting_text: ET-1/EdnrA signaling may contribute to the dorsoventral
axis patterning of the branchial arch system
- term:
id: GO:0001975
label: response to amphetamine
evidence_type: IMP
original_reference_id: PMID:24875861
review:
summary: response to amphetamine is related to reported Edn1 biology only as
a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0003253
label: cardiac neural crest cell migration involved in outflow tract
morphogenesis
evidence_type: IDA
original_reference_id: PMID:31219639
review:
summary: cardiac neural crest cell migration involved in outflow tract
morphogenesis is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:31219639
supporting_text: Cdc42 is part of the signaling pathway activated by endothelin
specifically in OFT CNCC to control their migration.
- term:
id: GO:0003357
label: noradrenergic neuron differentiation
evidence_type: IMP
original_reference_id: PMID:24875861
review:
summary: noradrenergic neuron differentiation is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0006468
label: protein phosphorylation
evidence_type: IDA
original_reference_id: PMID:31219639
review:
summary: protein phosphorylation captures the right general biology for
Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007507
label: heart development
evidence_type: IMP
original_reference_id: PMID:24875861
review:
summary: heart development is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0010467
label: gene expression
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: gene expression is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0031175
label: neuron projection development
evidence_type: IDA
original_reference_id: PMID:24875861
review:
summary: neuron projection development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0035050
label: embryonic heart tube development
evidence_type: IMP
original_reference_id: PMID:24875861
review:
summary: embryonic heart tube development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0035050
label: embryonic heart tube development
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: embryonic heart tube development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0035050
label: embryonic heart tube development
evidence_type: IMP
original_reference_id: PMID:31219639
review:
summary: embryonic heart tube development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0060385
label: axonogenesis involved in innervation
evidence_type: IMP
original_reference_id: PMID:24875861
review:
summary: axonogenesis involved in innervation is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0060385
label: axonogenesis involved in innervation
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: axonogenesis involved in innervation is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0071526
label: semaphorin-plexin signaling pathway
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: semaphorin-plexin signaling pathway is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0086100
label: endothelin receptor signaling pathway
evidence_type: IDA
original_reference_id: PMID:31219639
review:
summary: endothelin receptor signaling pathway is biologically consistent
with the curated synthesis for Edn1 and is supported by IDA evidence
(PMID:31219639).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'Falcon summarizes the canonical endothelin receptor pathway:
ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream
signaling.'
- term:
id: GO:0097492
label: sympathetic neuron axon guidance
evidence_type: IMP
original_reference_id: PMID:30735130
review:
summary: sympathetic neuron axon guidance is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Sympathetic axon guidance: Venous endothelin-1 is a direct
guidance cue; Manousiouthakis et al. report that "vascular-derived endothelin
controls growth and guidance of the STG axons to the heart."'
- term:
id: GO:0003094
label: glomerular filtration
evidence_type: IDA
original_reference_id: PMID:31402170
review:
summary: glomerular filtration is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0006366
label: transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:27026367
review:
summary: transcription by RNA polymerase II is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0006874
label: intracellular calcium ion homeostasis
evidence_type: ISO
original_reference_id: PMID:30990108
review:
summary: intracellular calcium ion homeostasis is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0006874
label: intracellular calcium ion homeostasis
evidence_type: IDA
original_reference_id: PMID:30990108
review:
summary: intracellular calcium ion homeostasis is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0010467
label: gene expression
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: gene expression is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0060070
label: canonical Wnt signaling pathway
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: canonical Wnt signaling pathway is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0070301
label: cellular response to hydrogen peroxide
evidence_type: ISO
original_reference_id: PMID:30990108
review:
summary: cellular response to hydrogen peroxide is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0070588
label: calcium ion transmembrane transport
evidence_type: IDA
original_reference_id: PMID:24722437
review:
summary: calcium ion transmembrane transport is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0072011
label: glomerular endothelium development
evidence_type: IDA
original_reference_id: PMID:31402170
review:
summary: glomerular endothelium development is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0072112
label: podocyte differentiation
evidence_type: IDA
original_reference_id: PMID:31402170
review:
summary: podocyte differentiation is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Kidney and podocyte disease evidence: Endothelin-1 stimulation
of primary mouse podocytes "elicited rapid calcium transients mediated by
endothelin type A receptors (ETARs) and endothelin type B receptors (ETBRs)"
and Ednra-mediated glomerular crosstalk is reported in diabetic kidney models.'
- term:
id: GO:0097237
label: cellular response to toxic substance
evidence_type: ISO
original_reference_id: PMID:30990108
review:
summary: cellular response to toxic substance is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0097237
label: cellular response to toxic substance
evidence_type: IDA
original_reference_id: PMID:30990108
review:
summary: cellular response to toxic substance is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0097237
label: cellular response to toxic substance
evidence_type: IMP
original_reference_id: PMID:30990108
review:
summary: cellular response to toxic substance is related to reported Edn1
biology only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0141156
label: cAMP/PKA signal transduction
evidence_type: ISO
original_reference_id: PMID:30990108
review:
summary: cAMP/PKA signal transduction is related to reported Edn1 biology
only as a broad downstream readout or generic interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:2001259
label: positive regulation of cation channel activity
evidence_type: ISO
original_reference_id: PMID:30990108
review:
summary: positive regulation of cation channel activity is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0031583
label: phospholipase D-activating G protein-coupled receptor signaling
pathway
evidence_type: IDA
original_reference_id: PMID:8978712
review:
summary: phospholipase D-activating G protein-coupled receptor signaling
pathway is supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- term:
id: GO:0009953
label: dorsal/ventral pattern formation
evidence_type: IMP
original_reference_id: PMID:15110048
review:
summary: dorsal/ventral pattern formation is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:15110048
supporting_text: ET-1/EdnrA signaling may contribute to the dorsoventral
axis patterning of the branchial arch system
- term:
id: GO:0086100
label: endothelin receptor signaling pathway
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: endothelin receptor signaling pathway is biologically consistent
with the curated synthesis for Edn1 and is supported by ISS evidence
(GO_REF:0000024).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: 'Falcon summarizes the canonical endothelin receptor pathway:
ET-1 activates ETA/ETB GPCRs with Gq/11-PLC-calcium/PKC and other downstream
signaling.'
- term:
id: GO:0010827
label: regulation of D-glucose transmembrane transport
evidence_type: IDA
original_reference_id: PMID:11546805
review:
summary: regulation of D-glucose transmembrane transport is supported for
Edn1 in a tissue, developmental, trafficking, or disease-model context,
but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007193
label: adenylate cyclase-inhibiting G protein-coupled receptor signaling
pathway
evidence_type: IGI
original_reference_id: PMID:15632412
review:
summary: adenylate cyclase-inhibiting G protein-coupled receptor signaling
pathway is supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- term:
id: GO:0007193
label: adenylate cyclase-inhibiting G protein-coupled receptor signaling
pathway
evidence_type: IDA
original_reference_id: PMID:2542249
review:
summary: adenylate cyclase-inhibiting G protein-coupled receptor signaling
pathway is supported for Edn1 in a tissue, developmental, trafficking, or
disease-model context, but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- term:
id: GO:0035810
label: positive regulation of urine volume
evidence_type: IMP
original_reference_id: PMID:15632412
review:
summary: positive regulation of urine volume is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0035810
label: positive regulation of urine volume
evidence_type: IGI
original_reference_id: PMID:15632412
review:
summary: positive regulation of urine volume is supported for Edn1 in a
tissue, developmental, trafficking, or disease-model context, but it is
not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0035815
label: positive regulation of renal sodium excretion
evidence_type: IMP
original_reference_id: PMID:15314687
review:
summary: positive regulation of renal sodium excretion is supported for Edn1
in a tissue, developmental, trafficking, or disease-model context, but it
is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0006885
label: regulation of pH
evidence_type: IDA
original_reference_id: PMID:11413164
review:
summary: regulation of pH is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0001501
label: skeletal system development
evidence_type: IMP
original_reference_id: PMID:8152482
review:
summary: skeletal system development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0001569
label: branching involved in blood vessel morphogenesis
evidence_type: IMP
original_reference_id: PMID:7615798
review:
summary: branching involved in blood vessel morphogenesis is supported for
Edn1 in a tissue, developmental, trafficking, or disease-model context,
but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0001666
label: response to hypoxia
evidence_type: IMP
original_reference_id: PMID:8764295
review:
summary: response to hypoxia is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0005102
label: signaling receptor binding
evidence_type: IDA
original_reference_id: PMID:2542249
review:
summary: signaling receptor binding captures the right general biology for
Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than receptor ligand
activity for this gene. Replace with receptor ligand activity to align the
annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0048018
label: receptor ligand activity
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- term:
id: GO:0005102
label: signaling receptor binding
evidence_type: IDA
original_reference_id: PMID:8680799
review:
summary: signaling receptor binding captures the right general biology for
Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than receptor ligand
activity for this gene. Replace with receptor ligand activity to align the
annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0048018
label: receptor ligand activity
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- term:
id: GO:0007200
label: phospholipase C-activating G protein-coupled receptor signaling
pathway
evidence_type: IDA
original_reference_id: PMID:2542249
review:
summary: phospholipase C-activating G protein-coupled receptor signaling
pathway captures the right general biology for Edn1, but a more specific
GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core receptor binding and signaling: Endothelin stimulates
high-affinity receptor binding and phospholipase C signaling in fibroblasts;
the abstract reports that endothelin "specifically binds to a single class
of high affinity receptors" and "stimulates phospholipase C with the production
of second messengers inositol trisphosphate and 1,2-diacylglycerol."'
- term:
id: GO:0007507
label: heart development
evidence_type: IMP
original_reference_id: PMID:7615798
review:
summary: heart development is supported for Edn1 in a tissue, developmental,
trafficking, or disease-model context, but it is not the core molecular
role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IMP
original_reference_id: PMID:8152482
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: IDA
original_reference_id: PMID:2542249
review:
summary: positive regulation of cell population proliferation is related to
reported Edn1 biology only as a broad downstream readout or generic
interaction term.
action: MARK_AS_OVER_ANNOTATED
reason: This overstates the direct role of the gene product; the curated
model is better captured by the specific receptor/ligand, pathway, and
supported non-core phenotype terms.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0014032
label: neural crest cell development
evidence_type: IMP
original_reference_id: PMID:9671575
review:
summary: neural crest cell development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: PMID:9671575
supporting_text: A signaling cascade involving endothelin-1, dHAND and
msx1 regulates development of neural-crest-derived branchial arch mesenchyme.
- term:
id: GO:0042474
label: middle ear morphogenesis
evidence_type: IMP
original_reference_id: PMID:8152482
review:
summary: The available local evidence supports pharyngeal-arch-derived
craniofacial abnormalities but does not directly verify middle ear
morphogenesis.
action: UNDECIDED
reason: Retaining this specific developmental annotation requires direct
middle-ear evidence rather than generic pharyngeal arch or cardiovascular
phenotype support.
- term:
id: GO:0043179
label: rhythmic excitation
evidence_type: IMP
original_reference_id: PMID:8764295
review:
summary: rhythmic excitation is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0045987
label: positive regulation of smooth muscle contraction
evidence_type: IDA
original_reference_id: PMID:8010105
review:
summary: positive regulation of smooth muscle contraction is biologically
consistent with the curated synthesis for Edn1 and is supported by IDA
evidence (PMID:8010105).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon identifies ET-1 as a potent vasoconstrictor whose
ETA signaling in vascular smooth muscle promotes sustained contraction.
- term:
id: GO:0048514
label: blood vessel morphogenesis
evidence_type: IMP
original_reference_id: PMID:7615798
review:
summary: blood vessel morphogenesis is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0051216
label: cartilage development
evidence_type: IMP
original_reference_id: PMID:8152482
review:
summary: cartilage development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0001701
label: in utero embryonic development
evidence_type: IMP
original_reference_id: PMID:15327783
review:
summary: in utero embryonic development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:15314687
review:
summary: extracellular space is biologically consistent with the curated
synthesis for Edn1 and is supported by IDA evidence (PMID:15314687).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon states that ET-1 functions as an extracellular
ligand produced by endothelial and epithelial cells.
- term:
id: GO:0007589
label: body fluid secretion
evidence_type: IMP
original_reference_id: PMID:15314687
review:
summary: body fluid secretion is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IMP
original_reference_id: PMID:15314687
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0014032
label: neural crest cell development
evidence_type: IMP
original_reference_id: PMID:15327783
review:
summary: neural crest cell development is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Cardiovascular development: Edn1-/- mice have "cardiovascular
malformations including interrupted aortic arch ... and ventricular septal
defect with abnormalities of the outflow tract."'
- term:
id: GO:0031707
label: endothelin A receptor binding
evidence_type: IPI
original_reference_id: PMID:9449664
review:
summary: endothelin A receptor binding is biologically consistent with the
curated synthesis for Edn1 and is supported by IPI evidence
(PMID:9449664).
action: ACCEPT
reason: The term matches a direct molecular function, pathway, or
location/physiological output of Edn1; it is specific enough to retain
without replacement.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reports that mature ET-1 signals through ETA/EDNRA
receptors, supporting endothelin A receptor binding.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:12441350
review:
summary: protein binding is not supported as an appropriate annotation for
Edn1 after review of the available mouse evidence.
action: REMOVE
reason: The term appears to reflect either an unsupported transfer, a
paralog/family overreach, or a localization/process inconsistent with the
curated Edn1 biology.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Curation judgment: broad signaling outputs such as MAPK, ERK,
JNK, PKA, calcium homeostasis, transcription, proliferation, toxic-substance
response, hypoxia response, and many hormone-response terms are downstream
or context-specific readouts of endothelin receptor activation.'
- term:
id: GO:0007585
label: respiratory gaseous exchange by respiratory system
evidence_type: IMP
original_reference_id: PMID:10626068
review:
summary: respiratory gaseous exchange by respiratory system is supported for
Edn1 in a tissue, developmental, trafficking, or disease-model context,
but it is not the core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0008217
label: regulation of blood pressure
evidence_type: IMP
original_reference_id: PMID:10626068
review:
summary: regulation of blood pressure is supported for Edn1 in a tissue,
developmental, trafficking, or disease-model context, but it is not the
core molecular role.
action: KEEP_AS_NON_CORE
reason: This annotation captures a real downstream or context-specific
consequence of Edn1 activity. It should be retained as non-core so it does
not obscure the primary receptor/ligand signaling function.
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
- term:
id: GO:0007186
label: G protein-coupled receptor signaling pathway
evidence_type: TAS
original_reference_id: PMID:11546805
review:
summary: G protein-coupled receptor signaling pathway captures the right
general biology for Edn1, but a more specific GO term is available.
action: MODIFY
reason: The current term is too broad or less precise than endothelin
receptor signaling pathway for this gene. Replace with endothelin receptor
signaling pathway to align the annotation with the reviewed evidence.
proposed_replacement_terms:
- id: GO:0086100
label: endothelin receptor signaling pathway
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Vascular and blood-pressure physiology: Edn1-null mice "die
of respiratory failure at birth and have morphological abnormalities of the
pharyngeal-arch-derived craniofacial tissues and organs"; heterozygotes "develop
elevated blood pressure."'
references:
- id: file:mouse/Edn1/Edn1-notes.md
title: Curator notes for mouse Edn1 review
- id: file:mouse/Edn1/Edn1-deep-research-falcon.md
title: Falcon deep research report for mouse Edn1
- id: file:mouse/Edn1/Edn1-uniprot.txt
title: UniProtKB record for mouse Edn1
- id: file:mouse/Edn1/Edn1-goa.tsv
title: QuickGO export for mouse Edn1
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with
GO terms
findings: []
- id: GO_REF:0000024
title: Manual transfer of experimentally-verified manual GO annotation data to
orthologs by curator judgment of sequence similarity
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
findings: []
- id: GO_REF:0000096
title: Automated transfer of experimentally-verified manual GO annotation data
to mouse-rat orthologs
findings: []
- id: GO_REF:0000107
title: Automatic transfer of experimentally verified manual GO annotation data
to orthologs using Ensembl Compara
findings: []
- id: GO_REF:0000119
title: Automated transfer of experimentally-verified manual GO annotation data
to mouse-human orthologs
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:10626068
title: Endothelin in the central control of cardiovascular and respiratory
functions.
findings: []
- id: PMID:11413164
title: Endothelin-1/endothelin-B receptor-mediated increases in NHE3 activity
in chronic metabolic acidosis.
findings: []
- id: PMID:11546805
title: beta -Arrestin-mediated recruitment of the Src family kinase Yes
mediates endothelin-1-stimulated glucose transport.
findings: []
- id: PMID:12441350
title: The first inner loop of endothelin receptor type B is necessary for
specific coupling to Galpha 13.
findings: []
- id: PMID:15110048
title: Endothelin-1 regulates the dorsoventral branchial arch patterning in
mice.
findings: []
- id: PMID:15314687
title: Collecting duct-specific knockout of endothelin-1 causes hypertension
and sodium retention.
findings: []
- id: PMID:15327783
title: Temporal requirement of signaling cascade involving
endothelin-1/endothelin receptor type A in branchial arch development.
findings: []
- id: PMID:15632412
title: Collecting duct-specific knockout of endothelin-1 alters vasopressin
regulation of urine osmolality.
findings: []
- id: PMID:16868309
title: Collecting duct-specific knockout of the endothelin B receptor causes
hypertension and sodium retention.
findings: []
- id: PMID:18401410
title: Endothelins are vascular-derived axonal guidance cues for developing
sympathetic neurons.
findings: []
- id: PMID:19111534
title: Paracrine regulation of the resumption of oocyte meiosis by
endothelin-1.
findings: []
- id: PMID:20495147
title: NFATc3 contributes to intermittent hypoxia-induced arterial remodeling
in mice.
findings: []
- id: PMID:20516397
title: Low blood pressure in endothelial cell-specific endothelin 1 knockout
mice.
findings: []
- id: PMID:20929948
title: Endothelin receptor type A expression defines a distinct cardiac
subdomain within the heart field and is later implicated in chamber
myocardium formation.
findings: []
- id: PMID:21525433
title: Endothelin-1 contributes to increased NFATc3 activation by chronic
hypoxia in pulmonary arteries.
findings: []
- id: PMID:23698114
title: Endothelin-1 inhibits sodium reabsorption by ET(A) and ET(B) receptors
in the mouse cortical collecting duct.
findings: []
- id: PMID:23933587
title: Endothelin regulates neural crest deployment and fate to form great
vessels through Dlx5/Dlx6-independent mechanisms.
findings: []
- id: PMID:24722437
title: Direct action of endothelin-1 on podocytes promotes diabetic
glomerulosclerosis.
findings: []
- id: PMID:24875861
title: Venous endothelin guides sympathetic innervation of the developing
mouse heart.
findings: []
- id: PMID:25197047
title: Essential role of sympathetic endothelin A receptors for adverse
cardiac remodeling.
findings: []
- id: PMID:2542249
title: A novel vasoactive peptide endothelin stimulates mitogenesis through
inositol lipid turnover in Swiss 3T3 fibroblasts.
findings: []
- id: PMID:26506449
title: Postotic and preotic cranial neural crest cells differently contribute
to thyroid development.
findings: []
- id: PMID:27026367
title: Endothelin-1 Induces Proteinuria by Heparanase-Mediated Disruption of
the Glomerular Glycocalyx.
findings: []
- id: PMID:27899487
title: Glomerular Endothelial Mitochondrial Dysfunction Is Essential and
Characteristic of Diabetic Kidney Disease Susceptibility.
findings: []
- id: PMID:30735130
title: Venous endothelin modulates responsiveness of cardiac sympathetic axons
to arterial semaphorin.
findings: []
- id: PMID:30990108
title: 'ET(A)R and protein kinase A pathway mediate ET-1 sensitization of TRPA1
channel: A molecular mechanism of ET-1-induced mechanical hyperalgesia.'
findings: []
- id: PMID:31219639
title: Cdc42 activation by endothelin regulates neural crest cell migration in
the cardiac outflow tract.
findings: []
- id: PMID:31402170
title: Endothelin receptor-A mediates degradation of the glomerular
endothelial surface layer via pathologic crosstalk between activated
podocytes and glomerular endothelial cells.
findings: []
- id: PMID:7615798
title: Aortic arch malformations and ventricular septal defect in mice
deficient in endothelin-1.
findings: []
- id: PMID:8010105
title: Effects of endothelin-1 on isolated uterine horns in estrogen-primed
and pregnant mice.
findings: []
- id: PMID:8152482
title: Elevated blood pressure and craniofacial abnormalities in mice
deficient in endothelin-1.
findings: []
- id: PMID:8680799
title: Developmental changes in cerebellar endothelin-1 receptors in the
neurologic mouse lurcher mutant.
findings: []
- id: PMID:8764295
title: Impaired ventilatory responses to hypoxia and hypercapnia in mutant
mice deficient in endothelin-1.
findings: []
- id: PMID:8978712
title: Endothelin stimulates phospholipase D in striatal astrocytes.
findings: []
- id: PMID:9449664
title: Cranial and cardiac neural crest defects in endothelin-A
receptor-deficient mice.
findings: []
- id: PMID:9671575
title: A signaling cascade involving endothelin-1, dHAND and msx1 regulates
development of neural-crest-derived branchial arch mesenchyme.
findings: []
core_functions:
- description: Mature endothelin-1 is a secreted peptide receptor ligand that
binds endothelin A and B receptors to activate endothelin receptor signaling
and regulate vascular tone, smooth muscle contraction, and blood-pressure
physiology.
molecular_function:
id: GO:0048018
label: receptor ligand activity
directly_involved_in:
- id: GO:0086100
label: endothelin receptor signaling pathway
- id: GO:0003100
label: regulation of systemic arterial blood pressure by endothelin
- id: GO:0045987
label: positive regulation of smooth muscle contraction
locations:
- id: GO:0005615
label: extracellular space
supported_by:
- reference_id: file:mouse/Edn1/Edn1-notes.md
supporting_text: 'Core ligand identity: Edn1 encodes preproendothelin-1, processed
to endothelin-1, a secreted vasoactive peptide ligand for endothelin receptors
EDNRA and EDNRB.'
- reference_id: file:mouse/Edn1/Edn1-deep-research-falcon.md
supporting_text: Falcon reinforces the core model that mature ET-1 is a
secreted peptide ligand for ETA/EDNRA and ETB/EDNRB receptors, driving
endothelin receptor signaling, vascular tone, and blood-pressure
physiology.
proposed_new_terms: []
suggested_questions:
- question: For Edn1, should developmental axon-guidance and neural-crest roles
be grouped under endothelin receptor signaling rather than maintained as
multiple granular phenotype-like GO process annotations?
suggested_experiments:
- hypothesis: Different Edn1 GO process annotations reflect receptor- and
tissue-specific deployment of the same secreted ligand.
description: Compare Ednra- and Ednrb-dependent responses to mature ET-1 in
vascular smooth muscle, podocytes, and sympathetic neurons using
receptor-selective antagonists or conditional receptor knockouts.
experiment_type: receptor-specific ligand response assay